View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4012_low_2 (Length: 681)
Name: NF4012_low_2
Description: NF4012
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4012_low_2 |
 |  |
|
| [»] scaffold0567 (1 HSPs) |
 |  |  |
|
| [»] scaffold0440 (1 HSPs) |
 |  |  |
|
| [»] scaffold0063 (1 HSPs) |
 |  |  |
|
| [»] scaffold0264 (1 HSPs) |
 |  |  |
|
| [»] scaffold0500 (1 HSPs) |
 |  |  |
|
| [»] scaffold0665 (1 HSPs) |
 |  |  |
|
| [»] scaffold0352 (1 HSPs) |
 |  |  |
|
| [»] scaffold0363 (2 HSPs) |
 |  |  |
|
| [»] scaffold0134 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 578; Significance: 0; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 578; E-Value: 0
Query Start/End: Original strand, 1 - 666
Target Start/End: Complemental strand, 2542028 - 2541363
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaaa |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2542028 |
aaaggatgtattaaattcaatggtgccctaggcagttgagtttattcttgtaacataaacggattaaaaacaataaaatataggttttttgaaaattaaa |
2541929 |
T |
 |
| Q |
101 |
gaggtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaa |
200 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2541928 |
gaggtatggttaagaccttcgaatcctctgaagttctcttatggtaatttgtactcctatttcaagcaatgattatctagttaaacgacagattaacaaa |
2541829 |
T |
 |
| Q |
201 |
gtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgt |
300 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
2541828 |
gtaattttatccaatctcttgacctaaaattcttctcggaaataacaatccattaatctcttaaatgaattcaaaaccattgaaggttttaacagtccgt |
2541729 |
T |
 |
| Q |
301 |
taatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtca |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2541728 |
taatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagttcagagttaaaagccggtgttagtggtca |
2541629 |
T |
 |
| Q |
401 |
atcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaac |
500 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||| |
|
|
| T |
2541628 |
atcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacatacgaaaatcattaaacacaagataatatgaataaaaac |
2541529 |
T |
 |
| Q |
501 |
tagacttttattgatatgataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaaccaaaagagaaattagctagaca |
600 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
2541528 |
tagacttttattgatatgaaaggaattcaacaaattagagttcccataagattacattagattcatctaagtctcaaccaatagagaaattagctaaaca |
2541429 |
T |
 |
| Q |
601 |
tagaaatataaataaatagcatggaaaataaaattaaccatgaaaccatgttgttcctcatttctc |
666 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2541428 |
tagaaatacaaataaatagcatggaaaataaaattaaccatgaaaccatgttgttcctcatttctc |
2541363 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 104 - 568
Target Start/End: Original strand, 647408 - 647873
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagta |
203 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
647408 |
gtatggttaagatcttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacaaagta |
647507 |
T |
 |
| Q |
204 |
attttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaa |
303 |
Q |
| |
|
||| |||||||||||||||||||||||||| |||| | | |||| || |||||||||||| ||||||||||||| ||||||||||||| || |||||| |
|
|
| T |
647508 |
attctacccaatctcttgacctagaattctccccgcatgtgacaaccccttaatctcttaagtgaattcgaaaccgttggaggttttaaaagaacgttaa |
647607 |
T |
 |
| Q |
304 |
tccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatc |
403 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| | |||||| | ||||| ||||||| | |||||||| || | |
|
|
| T |
647608 |
tccctatgtcataacctaataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggccattt |
647707 |
T |
 |
| Q |
404 |
aagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactag |
503 |
Q |
| |
|
|| ||||||||||| |||| | | || |||||||| | ||||||||| ||||||||| |||| || |||||||| |||||||||| |||||||| |
|
|
| T |
647708 |
aatctctaagatcagtttgcatattcataaagctagggttagtagtcaatgataaacatacaaaaagcataaaacataaagtaatatgaattaaaactag |
647807 |
T |
 |
| Q |
504 |
acttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
||||| | ||||| | | |||| ||||||||||||| ||||||||| |||||||||| |||||||| |
|
|
| T |
647808 |
actttcaatgatattcaaaggagttcaacaaattagggttcccataggattacatcagattcatct |
647873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 593
Target Start/End: Original strand, 26062792 - 26063387
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaaa |
100 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| | ||| || | |||||| |||||| ||||||||||||||||| | |||||| |||||||| | |
|
|
| T |
26062792 |
aaaggatgtattaaattcaaggttgccctaggtagttggattggtatttgtaaaataaacggattaaaaacaataaaagtttggtttta-gaaaattaga |
26062890 |
T |
 |
| Q |
101 |
gag----gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaa |
196 |
Q |
| |
|
||| ||||||||||||| || |||||||| |||||||| |||||||||||||||||||| || || |||||||||||||||| ||||||||||||| |
|
|
| T |
26062891 |
gagagatgtatggttaagacctttgaatcctccgaagttctcctatggtaatttgcactcctaattcaatcaatgattatctagttcaacgacagattaa |
26062990 |
T |
 |
| Q |
197 |
caaagtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagt |
296 |
Q |
| |
|
|||||||| | ||||||||||||||||||||| |||| |||| || |||||| || |||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
26062991 |
caaagtaactctacccaatctcttgacctagagttctccccgcaagtaacaaccccttaatctcttaagtgaattcgaaaccattggaggttttaacaga |
26063090 |
T |
 |
| Q |
297 |
ccgttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaac-attccacctagtttagagttaaaagccggtgttagt |
395 |
Q |
| |
|
|||| |||| ||| ||||||||||||||| || ||||||||||| |||||||||||||| | ||| |||||| | ||||| ||||||| | |||||| |
|
|
| T |
26063091 |
acgtttatccatatgtcataacctaataatgatcaatctctagcttgattacttaggttaacctatt--acctagatcagagtcaaaagccagggttagt |
26063188 |
T |
 |
| Q |
396 |
ggtcaatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaac-ataagaaaattattaaacataagataatatgaat |
494 |
Q |
| |
|
||||| |||| ||||| |||| |||| | | || |||||||| | ||||| || |||||| ||| |||| |||||||| || |||||||||| |
|
|
| T |
26063189 |
ggtcattcaatctctaacatcaatttgcatattcataaagctagggttattagtcgatgataaacaatacaaaaagcattaaacacaaagtaatatgaat |
26063288 |
T |
 |
| Q |
495 |
aaaaactagacttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaaccaaaagagaaattag |
593 |
Q |
| |
|
|||||||||||||| ||||| | | | |||| |||||||||| || ||||||||| |||||||| | |||||||| ||||||||||| || ||||||||| |
|
|
| T |
26063289 |
aaaaactagactttcattgacattcaaaggagttcaacaaatcagggttcccatatgattacattagattcatctcagtctcaaccacaa-agaaattag |
26063387 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 106 - 596
Target Start/End: Complemental strand, 26060626 - 26060135
Alignment:
| Q |
106 |
atggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaat |
205 |
Q |
| |
|
||||||||||| ||||||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
26060626 |
atggttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagcttcccgatagattaacaaagtaac |
26060527 |
T |
 |
| Q |
206 |
tttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatc |
305 |
Q |
| |
|
| |||||||||||||||||||||||||| || | ||||||||| || ||||| |||||| ||||||||||||| ||||||||||||| || |||||||| |
|
|
| T |
26060526 |
tctacccaatctcttgacctagaattctccctgcaaataacaaccccttaatgtcttaagtgaattcgaaaccgttggaggttttaatagaacgttaatc |
26060427 |
T |
 |
| Q |
306 |
cctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaa |
405 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||||||| |||||||| ||||||||| |||||| | ||||| ||||| | ||||||||||| |||| |
|
|
| T |
26060426 |
cctatgtcataacctaataatggtctatctctagcttgattacttaagttaaacatattacctagatcagagtcaaaagtcatggttagtggtcattcaa |
26060327 |
T |
 |
| Q |
406 |
gttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactagac |
505 |
Q |
| |
|
|||||||||| || | | | || |||||||| | |||||| || ||||||||| |||| ||||||||||| |||||||||||||| |||||| |
|
|
| T |
26060326 |
tctctaagatcaatttgtatattcatgaagctagggttagtagtcgatgataaacatacaaaaagcattaaacataaagtaatatgaataaaatctagac |
26060227 |
T |
 |
| Q |
506 |
ttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaaccaaaagagaaattagcta |
596 |
Q |
| |
|
||||||||||| | | | || ||||||||| ||| ||| |||| |||| |||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
26060226 |
ttttattgatattcaaaagagttcaacaaactaggattctcatacaattatatcatattcatctaagtctcaaccaattgaaaaattagcta |
26060135 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 104 - 568
Target Start/End: Original strand, 650680 - 651146
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagta |
203 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
650680 |
gtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacaaagta |
650779 |
T |
 |
| Q |
204 |
attttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaa |
303 |
Q |
| |
|
||| |||||||||||||||||||||||||| |||| | | |||| || |||||||||||| ||||||||||||| ||||||||||||| || |||||| |
|
|
| T |
650780 |
attctacccaatctcttgacctagaattctccccgcatgtgacaaccccttaatctcttaagtgaattcgaaaccgttggaggttttaaaagaacgttaa |
650879 |
T |
 |
| Q |
304 |
tccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatc |
403 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| | |||||| | ||||| ||||||| | |||||||| || | |
|
|
| T |
650880 |
tccctatgtcataacctaataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggccattt |
650979 |
T |
 |
| Q |
404 |
aagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactag |
503 |
Q |
| |
|
|| ||||||||||| |||| | | || ||| |||| | | | |||| ||||||||| |||| || |||||||| |||||||||| |||||||| |
|
|
| T |
650980 |
aatctctaagatcagtttgcatattcataaagttagggttaggaaacaatgataaacatacaaaaagcataaaacataaagtaatatgaattaaaactag |
651079 |
T |
 |
| Q |
504 |
acttttattgata-tgataggaattcaacaaatta-gagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
||||| | ||||| | | |||| |||||||||||| | ||||||||| |||||||||| |||||||| |
|
|
| T |
651080 |
actttcaatgatattcaaaggagttcaacaaattaggggttcccataggattacatcagattcatct |
651146 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 140 - 568
Target Start/End: Complemental strand, 12171988 - 12171558
Alignment:
| Q |
140 |
tatggtaatttgcactcctatttt-aagcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctcttgacctagaattcttcccg |
238 |
Q |
| |
|
|||||||||||||||||||| | || |||||||||| ||||| ||||| ||||||| ||||||| ||||||||||||||||||| |||||| |||| |
|
|
| T |
12171988 |
tatggtaatttgcactcctaaatacaatcaatgattatttagtttcacgacggattaacttagtaattctacccaatctcttgacctacaattctccccg |
12171889 |
T |
 |
| Q |
239 |
gaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacctaataattgtctatctcta |
338 |
Q |
| |
|
|| | |||| || |||||||||||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
12171888 |
caagtgacaaccccttaatctcttaagtgaattcgaaaccattggaggtattaaacgaacgttaatccctatatcataacctaataatgatctatctcta |
12171789 |
T |
 |
| Q |
339 |
gcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcctgcaaacttatcaagcta |
438 |
Q |
| |
|
|||| |||||||||||||||| | ||||| || ||| ||||||||| | ||||||||||| |||| ||||| ||||| |||| | | || |||||| |
|
|
| T |
12171788 |
gcttgattacttaggttaaacctattacctaattaagaattaaaagccagggttagtggtcattcaatttctatgatcaatatgcatattcataaagcta |
12171689 |
T |
 |
| Q |
439 |
ggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactagacttttattgat-atgataggaattcaacaaatta |
537 |
Q |
| |
|
|| | ||||| || ||||||||| || |||||||| ||| |||||||||||||||||| ||||| |||||| | | |||| ||||||||||| |
|
|
| T |
12171688 |
gggttaatagtctatcataaacatacataaggcattaaacacaaggtaatatgaataaaaactaaactttcattgatgttcaaaggagttcaacaaattt |
12171589 |
T |
 |
| Q |
538 |
gagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
| ||||| ||| | |||||||| |||||||| |
|
|
| T |
12171588 |
gggttccaatagggttacatcagattcatct |
12171558 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 587 - 667
Target Start/End: Original strand, 7395279 - 7395359
Alignment:
| Q |
587 |
aaattagctagacatagaaatataaataaatagcatggaaaataaaattaaccatgaaaccatgttgttcctcatttctct |
667 |
Q |
| |
|
|||||| ||||||||||| ||| |||||||||||||| |||||||||||||||| ||| |||||||||||||| |||||| |
|
|
| T |
7395279 |
aaattaactagacatagagatacaaataaatagcatgaaaaataaaattaaccacaaaaacatgttgttcctcaattctct |
7395359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 16926982 - 16927085
Alignment:
| Q |
253 |
ttaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacctaataattgtctatctctagcttaattacttag |
352 |
Q |
| |
|
|||||||||||| |||||| ||| || ||||||||||||| ||| ||||||| ||| ||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
16926982 |
ttaatctcttaagtgaattagaa-ccgttggaggttttaatagtttgttaatctctagatcataacctaataattgttcatctctaatttaattacttag |
16927080 |
T |
 |
| Q |
353 |
gttaa |
357 |
Q |
| |
|
||||| |
|
|
| T |
16927081 |
gttaa |
16927085 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 6031640 - 6031536
Alignment:
| Q |
253 |
ttaatctcttaaatgaattcgaaaccattggaggtttt-aacagtccgttaatccctatatcataacctaataattgtctatctctagcttaattactta |
351 |
Q |
| |
|
|||||||||||| |||||||||||||||| |||||||| || || | |||| ||||| |||||||| ||| |||||||||||||| ||||| ||| ||| |
|
|
| T |
6031640 |
ttaatctcttaagtgaattcgaaaccattagaggtttttaaaagacagttac-ccctaaatcataacttaacaattgtctatctcttgcttagttaatta |
6031542 |
T |
 |
| Q |
352 |
ggttaa |
357 |
Q |
| |
|
||||| |
|
|
| T |
6031541 |
agttaa |
6031536 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 11649440 - 11649503
Alignment:
| Q |
106 |
atggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaa |
169 |
Q |
| |
|
||||||||||| ||||||||||| |||||||| ||||||||||||||||| || ||| ||||| |
|
|
| T |
11649440 |
atggttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcataattttagcaa |
11649503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 590 - 665
Target Start/End: Original strand, 22093481 - 22093556
Alignment:
| Q |
590 |
ttagctagacatagaaatataaataaatagcatggaaaataaaattaaccatgaaaccatgttgttcctcatttct |
665 |
Q |
| |
|
||||||| ||||||| ||| ||||||||| | ||||||||||||||||||||| | ||| |||||||||| |||| |
|
|
| T |
22093481 |
ttagctacacatagagatacaaataaatatcttggaaaataaaattaaccatgtcatcatcttgttcctcaattct |
22093556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 12172093 - 12172041
Alignment:
| Q |
24 |
tgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaa |
77 |
Q |
| |
|
||||||||||| ||||||| ||| | ||||||||||| |||||||||||||||| |
|
|
| T |
12172093 |
tgccctaggcagttgagttgatt-tagtaacataaactgattaaaaacaataaa |
12172041 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 215; Significance: 1e-117; HSPs: 23)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 1 - 578
Target Start/End: Original strand, 3862006 - 3862575
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtttattctt-gtaacataaacagattaaaaacaataaaatataggttttttgaaaattaa |
99 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| || | || ||| || ||||||||||| ||||||||||||||||| || |||||| | ||||||| |
|
|
| T |
3862006 |
aaaggatgtattaaattcaatgatgccctaggcagttcaattgattttttgtaacataaactgattaaaaacaataaaagattggttttat-aaaattag |
3862104 |
T |
 |
| Q |
100 |
agag--gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaac |
197 |
Q |
| |
|
|||| ||||| ||||||| |||||||||| |||||||| |||| |||||||| || ||| ||||||||||||||| |||||||||||||| |
|
|
| T |
3862105 |
agagaagtatgattaagaccttcgaatccttcgaagttctcctatg--------cactcctaattcaagaaatgattatctagttcaacgacagattaac |
3862196 |
T |
 |
| Q |
198 |
aaagtaattttacccaatctcttgacctagaattcttcccggaaataacaatcc----attaatctcttaaatgaattcgaaaccattggaggttttaac |
293 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |||| || | |||| || |||||| |||||| ||||||| |||| ||||| |||||||| |
|
|
| T |
3862197 |
aaagtaattctacccaatctcttgacctagaattctccccgcaagtgacaaccccttaattaatgtcttaagtgaattcaaaactgttggaagttttaac |
3862296 |
T |
 |
| Q |
294 |
agtccgttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgtta |
393 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||| |||||| | |||| |
|
|
| T |
3862297 |
cgtcctttaatccctatatcataacctaataattttctatctctagcttaattacttaggttaaacacaccacctagttcagagtttaaagccagggtta |
3862396 |
T |
 |
| Q |
394 |
gtggtcaatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaa |
493 |
Q |
| |
|
||||||||| ||||||||||| ||| ||||||| |||| || || ||||||||||||||||||| ||| |||||| | ||||| |||| || |
|
|
| T |
3862397 |
gtggtcaattaagttctaagaccagtctgcaaatttat-------gggctagtagtcaataataaacatacacaaagcattaaaaacaagatgatataaa |
3862489 |
T |
 |
| Q |
494 |
taaaaactagacttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaac |
578 |
Q |
| |
|
||||||||||||||| ||||||| | | |||| ||||||||||||| |||| ||||||||||||| | ||||| |||||||||||| |
|
|
| T |
3862490 |
taaaaactagactttcattgatatttaaaggagttcaacaaattagggttctcataagattacattagattcaactaagtctcaac |
3862575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 104 - 568
Target Start/End: Original strand, 17863299 - 17863764
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagta |
203 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
17863299 |
gtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacaaagta |
17863398 |
T |
 |
| Q |
204 |
attttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaa |
303 |
Q |
| |
|
||| |||||||||||||||||||||||||| |||| | | |||| || |||||||||||| ||||||||||||| ||||||||||||| || |||||| |
|
|
| T |
17863399 |
attctacccaatctcttgacctagaattctccccgcatgtgacaaccccttaatctcttaagtgaattcgaaaccgttggaggttttaaaagaacgttaa |
17863498 |
T |
 |
| Q |
304 |
tccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatc |
403 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| | |||||| | ||||| ||||||| | ||||||||||| | |
|
|
| T |
17863499 |
tccctatgtcataacctaataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggtcattt |
17863598 |
T |
 |
| Q |
404 |
aagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactag |
503 |
Q |
| |
|
|| ||||||||||| |||| | | || |||||||| | ||||||||| ||||||||| |||| || |||||||| |||||||||| |||||||| |
|
|
| T |
17863599 |
aatctctaagatcagtttgcatattcataaagctagggttagtagtcaatgataaacatacaaaaagcataaaacataaagtaatatgaattaaaactag |
17863698 |
T |
 |
| Q |
504 |
acttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
||||| | ||||| | | |||| ||||||||||||| ||||||||| |||||||||| |||||||| |
|
|
| T |
17863699 |
actttcaatgatattcaaaggagttcaacaaattagggttcccataggattacatcagattcatct |
17863764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 104 - 568
Target Start/End: Original strand, 17866558 - 17867023
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagta |
203 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
17866558 |
gtatggtttagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacaaagta |
17866657 |
T |
 |
| Q |
204 |
attttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaa |
303 |
Q |
| |
|
||| |||||||||||||||||||||||||| |||| | | |||| || |||||||||||| ||||||||||||| ||||||||||||| || |||||| |
|
|
| T |
17866658 |
attctacccaatctcttgacctagaattctccccgcatgtgacaaccccttaatctcttaagtgaattcgaaaccgttggaggttttaaaagaacgttaa |
17866757 |
T |
 |
| Q |
304 |
tccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatc |
403 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| | |||||| | ||||| ||||||| | ||||||||||| | |
|
|
| T |
17866758 |
tccctatgtcataacctaataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggtcattt |
17866857 |
T |
 |
| Q |
404 |
aagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactag |
503 |
Q |
| |
|
|| ||||||||||| |||| | | || |||||||| | ||||||||| ||||||||| |||| || |||||||| |||||||||| |||||||| |
|
|
| T |
17866858 |
aatctctaagatcagtttgcatattcataaagctagggttagtagtcaatgataaacatacaaaaagcataaaacataaagtaatatgaattaaaactag |
17866957 |
T |
 |
| Q |
504 |
acttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
||||| | ||||| | | |||| ||||||||||||| ||||||||| |||||||||| |||||||| |
|
|
| T |
17866958 |
actttcaatgatattcaaaggagttcaacaaattagggttcccataggattacatcagattcatct |
17867023 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 601
Target Start/End: Original strand, 36843036 - 36843641
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatg--ttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaatta |
98 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| ||| || || || ||| ||||| | |||||||||||| | |||||| |||| |||| |
|
|
| T |
36843036 |
aaaggatgtattaaattcaatggtttgccctaggcagttggattggtttttataaagtaaacgtaaataaaacaataaaagtt-ggttttatgaatatta |
36843134 |
T |
 |
| Q |
99 |
aagag--gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaa |
196 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||| |||||||||| ||||||||| || || |||||||||||||||| ||||||||||||| |
|
|
| T |
36843135 |
gagagaagtatggttaagaccttcgaatcctccgaagttctcctatggtaattcgcactcctacttcaatcaatgattatctagttcaacgacagattaa |
36843234 |
T |
 |
| Q |
197 |
caaagtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagt |
296 |
Q |
| |
|
|||| ||| | ||||||||||||||||||||| |||| |||| || |||||| || |||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
36843235 |
caaattaactctacccaatctcttgacctagagttctccccgcaagtaacaaccccttaatctcttaagtgaattcgaaaccattggaggttttaacaga |
36843334 |
T |
 |
| Q |
297 |
ccgttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtg |
396 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| | |||||| | ||||| ||||||| | |||||| |
|
|
| T |
36843335 |
acgttaatccctatgtcataacctaataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccaggattagtg |
36843434 |
T |
 |
| Q |
397 |
gtcaatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaac-ataagaaaattattaaacataagataatatgaata |
495 |
Q |
| |
|
|||| |||| ||||| |||| |||| | | || |||||||| | ||||||||| |||||| ||| |||| |||||||| || ||||||||||| |
|
|
| T |
36843435 |
gtcattcaatctctaacatcaatttgcatattcataaagctagggttagtagtcaatgataaacaatataaaaagcattaaacacaaagtaatatgaata |
36843534 |
T |
 |
| Q |
496 |
aaaactagacttttattgatatgataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaacca-aaagagaaattagc |
594 |
Q |
| |
|
||||||||||||| ||||| || | || ||||||||||||||||||||| |||||||||||| |||||||||||||||| ||| ||||| || |||| |
|
|
| T |
36843535 |
aaaactagactttcattgacattcaaagagttcaacaaattagagttcccacaagattacatcaaattcatctaagtctcagccacaaagaaaatttagg |
36843634 |
T |
 |
| Q |
595 |
tagacat |
601 |
Q |
| |
|
||||||| |
|
|
| T |
36843635 |
tagacat |
36843641 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 104 - 568
Target Start/End: Complemental strand, 6967188 - 6966723
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagta |
203 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
6967188 |
gtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgatagattaacaaagta |
6967089 |
T |
 |
| Q |
204 |
attttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaa |
303 |
Q |
| |
|
||| ||||||||||||| |||||||||||| |||| | | |||| || |||||||||||| ||||||||||||| ||||||||||||| || |||||| |
|
|
| T |
6967088 |
attctacccaatctcttaacctagaattctccccgcatgtgacaaccccttaatctcttaagtgaattcgaaaccgttggaggttttaaaagaacgttaa |
6966989 |
T |
 |
| Q |
304 |
tccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatc |
403 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| | |||||| | ||||| ||||||| | ||||||||||| | |
|
|
| T |
6966988 |
tccctatgtcataacctaataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggtcattt |
6966889 |
T |
 |
| Q |
404 |
aagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactag |
503 |
Q |
| |
|
|| ||||||||||| || | | | || |||||||| | ||||||||| ||||||||| |||| || |||||||| |||||||||| |||||||| |
|
|
| T |
6966888 |
aatctctaagatcagtttgaatattcataaagctagggttagtagtcaatgataaacatacaaaaagcataaaacataaagtaatatgaattaaaactag |
6966789 |
T |
 |
| Q |
504 |
acttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
||||| | ||||| | | |||| ||||||||||||| ||||||||| |||||||||| |||||||| |
|
|
| T |
6966788 |
actttcaatgatattcaaaggagttcaacaaattagggttcccataggattacatcagattcatct |
6966723 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 66 - 568
Target Start/End: Original strand, 46846478 - 46846979
Alignment:
| Q |
66 |
aaaaacaataaaatataggttttttgaaaattaa-agaggtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctatttta |
164 |
Q |
| |
|
||||||||||||| || ||||||| ||||||| | ||| ||||||||||| | ||||||||||| |||||||| |||||||||||||||||||| || | |
|
|
| T |
46846478 |
aaaaacaataaaagattggtttttagaaaattgagagaagtatggttaagtccttcgaatcctccgaagttcttctatggtaatttgcactcctagttca |
46846577 |
T |
 |
| Q |
165 |
agcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaa |
264 |
Q |
| |
|
| |||||||||| ||||| ||||||||||||| | ||||| |||||||||||||||||||||||||| |||| || | |||| || |||||||||||| |
|
|
| T |
46846578 |
atcaatgattatttagtttcacgacagattaacctaataattctacccaatctcttgacctagaattctccccgcaagtgacaaccccttaatctcttaa |
46846677 |
T |
 |
| Q |
265 |
atgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattcc |
364 |
Q |
| |
|
||||||||||| | ||||||||||||| || ||||||||||||| ||||||||||||||| |||||||||| ||| |||||||||||||||| | |
|
|
| T |
46846678 |
ctgaattcgaaaacgttggaggttttaaaagatcgttaatccctatgtcataacctaataataatctatctctaacttgattacttaggttaaacctatt |
46846777 |
T |
 |
| Q |
365 |
acctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataa |
464 |
Q |
| |
|
|| ||||| ||||||||||| | | ||||||| ||| |||| ||| | ||||| |||| | |||||||||| | ||||| || ||||||||| |
|
|
| T |
46846778 |
acttagttcagagttaaaagtcagggttagtgatcattcaatttccatgatcaatatgca---tgttcaagctagggttaatagtcgatgataaacatac |
46846874 |
T |
 |
| Q |
465 |
gaaaattattaaacataagataatatgaataaaaactagacttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatatt |
563 |
Q |
| |
|
|||| |||||||| ||| ||||||||||||| |||| ||||| ||||||| | | |||| ||||||||||||| ||||||||| | |||||||| ||| |
|
|
| T |
46846875 |
aaaaagcattaaacacaaggtaatatgaataaagactaaactttcattgatattcaaaggagttcaacaaattagggttcccatagggttacatcagatt |
46846974 |
T |
 |
| Q |
564 |
catct |
568 |
Q |
| |
|
||||| |
|
|
| T |
46846975 |
catct |
46846979 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 24 - 568
Target Start/End: Complemental strand, 11279612 - 11279068
Alignment:
| Q |
24 |
tgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaa-agaggtatggttaagacattcga |
122 |
Q |
| |
|
||||||||||| ||||||| ||| ||||||||||||| |||||||||| | ||| || ||||||| ||| ||| | ||| ||||||||||| | ||||| |
|
|
| T |
11279612 |
tgccctaggcagttgagttgatt-ttgtaacataaactgattaaaaacgaataaagattggtttttagaagattgagagaagtatggttaagtccttcga |
11279514 |
T |
 |
| Q |
123 |
atcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctcttga |
222 |
Q |
| |
|
||| | |||||||| | |||||||||||||||||| || || ||||||||| ||||| ||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
11279513 |
atctttcgaagttctcctctggtaatttgcactcctagttcaataaatgattatttagtttcacgacagattaacttagtaattctacccaatctcttga |
11279414 |
T |
 |
| Q |
223 |
cctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacctaa |
322 |
Q |
| |
|
||||| ||||| |||| || | |||| || |||||||||||| ||||| |||||| |||||||| |||| | |||||||| |||| ||||||||||| |
|
|
| T |
11279413 |
cctaggattctccccgcaagtgacaaccccttaatctcttaagtgaatctgaaaccgttggaggtattaa-tgaacgttaatctctatgtcataacctaa |
11279315 |
T |
 |
| Q |
323 |
taattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcctg |
422 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||| | |||||||| ||||||||||||| | ||||||||||| |||| ||||| ||||| || |
|
|
| T |
11279314 |
taatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagccagggttagtggtcattcaatttctatgatcaatatg |
11279215 |
T |
 |
| Q |
423 |
caaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactagacttttattgata-tgata |
521 |
Q |
| |
|
|| | || |||||||| | |||||| || ||||||||| |||| ||||| || ||| ||||||||||||| |||| ||||| ||||||| | | | |
|
|
| T |
11279214 |
catgttcataaagctagggttagtagtcgatgataaacatacaaaaagcattaagcacaaggtaatatgaataaagactaaactttcattgatattcaaa |
11279115 |
T |
 |
| Q |
522 |
ggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
||| ||||||||||||| ||||||||| | |||||||| |||||||| |
|
|
| T |
11279114 |
ggagttcaacaaattagggttcccatagggttacatcagattcatct |
11279068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 104 - 568
Target Start/End: Complemental strand, 24783449 - 24782981
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagta |
203 |
Q |
| |
|
||||||||||||| || |||||||| |||||||| ||||||||||| || ||||| || || |||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
24783449 |
gtatggttaagacctttgaatcctccgaagttctcatatggtaattttcattcctaattcaatcaatgattatctagtttaacgagagattaacaaagta |
24783350 |
T |
 |
| Q |
204 |
attttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaa |
303 |
Q |
| |
|
||| |||||||||||||||||||||||||| ||| || | |||| || |||||||||||| ||||||||||||| |||||| ||||||||| |||||| |
|
|
| T |
24783349 |
attatacccaatctcttgacctagaattctctccgcaagtgacaaccccttaatctcttaagtgaattcgaaaccgttggagattttaacagaacgttaa |
24783250 |
T |
 |
| Q |
304 |
tccctatatcataacctaataattgtctatctctagct---taattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtca |
400 |
Q |
| |
|
||||||| ||||||||||||||| | ||||||||||| | |||||||||||||||| | |||||| | ||||| ||||||| | ||||||||||| |
|
|
| T |
24783249 |
tccctatgtcataacctaataatgatatatctctagcttgattattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggtca |
24783150 |
T |
 |
| Q |
401 |
atcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaac |
500 |
Q |
| |
|
|||| |||||||||| |||| | | || |||||| | | |||||| || ||||||||| |||| || |||||||| ||||||| || ||||| |
|
|
| T |
24783149 |
ttcaatctctaagatcaatttgcatattcataaagctatggttagtagtcgatgataaacatacaaaaagcatcaaacataaagtaatatggattaaaac |
24783050 |
T |
 |
| Q |
501 |
tagacttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
|||||||| ||||||| | | |||| ||||||||| || ||||||||| |||||||||| |||||||| |
|
|
| T |
24783049 |
tagactttcattgatattcaaaggagttcaacaaactacggttcccataggattacatcagattcatct |
24782981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 104 - 568
Target Start/End: Complemental strand, 294905 - 294440
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagta |
203 |
Q |
| |
|
||||||||||| | ||||||||||| |||||||| |||||||||||||||||||| | || ||||||||||||| || |||||||||||||||||||| |
|
|
| T |
294905 |
gtatggttaagtctttcgaatcctccgaagttctcctatggtaatttgcactcctaatgcaatcaatgattatctaattcaacgacagattaacaaagta |
294806 |
T |
 |
| Q |
204 |
attttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaa |
303 |
Q |
| |
|
||| ||||||||||||||| |||||||||| ||| || | |||| || |||||||||||| |||||||||||| ||||| ||||||||| |||||| |
|
|
| T |
294805 |
attatacccaatctcttgaactagaattctccccataagtgacaaccccttaatctcttaagtgaattcgaaactgttggatgttttaacaaaacgttaa |
294706 |
T |
 |
| Q |
304 |
tccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatc |
403 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| | |||||| | ||||| ||||||| | ||||||||||| || |
|
|
| T |
294705 |
tccctatgtcataacctaataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggtcattc |
294606 |
T |
 |
| Q |
404 |
aagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactag |
503 |
Q |
| |
|
|| |||||||||| |||| | | || || |||| | |||| || ||||||||| | || ||||||||||| |||||||||| |||| || |
|
|
| T |
294605 |
aatctctaagatcaatttgcatattcataaaactagagttaatagttcatgataaacatacaataagcattaaacataaagtaatatgaattaaaattat |
294506 |
T |
 |
| Q |
504 |
acttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
||||| ||||||| | | |||| ||||||||| ||| ||||||||| |||||||||| |||||||| |
|
|
| T |
294505 |
actttcattgatattcaaaggagttcaacaaactagggttcccataggattacatcagattcatct |
294440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 24 - 568
Target Start/End: Original strand, 23759732 - 23760278
Alignment:
| Q |
24 |
tgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggtttttt-gaaaattaa-agaggtatggttaagacattcg |
121 |
Q |
| |
|
||||||||||| ||||||| ||| | ||||||||||| |||||||||||||||| || ||||||| |||||| | ||| ||||||||||| | |||| |
|
|
| T |
23759732 |
tgccctaggcagttgagttgatt-tagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatcgagagaagtatggttaagtccttcg |
23759830 |
T |
 |
| Q |
122 |
aatcctctgaagttctattatggtaatttgcactcctatttta-agcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctctt |
220 |
Q |
| |
|
||||||| ||| ||| |||||||||||||||||||| | | |||||||||| ||||| ||||| ||||||| ||||||| ||||||||||||| |
|
|
| T |
23759831 |
aatcctccaaagctctcctatggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacggattaacttagtaattctacccaatctctt |
23759930 |
T |
 |
| Q |
221 |
gacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacct |
320 |
Q |
| |
|
| ||||||||||| |||| || | |||| || |||||||||||| ||||||| |||||||||||||| ||||| | ||||||||||||||||||||||| |
|
|
| T |
23759931 |
gccctagaattctccccgcaagtgacaaccccttaatctcttaagtgaattcaaaaccattggaggtattaac-gaacgttaatccctatatcataacct |
23760029 |
T |
 |
| Q |
321 |
aataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcc |
420 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||| | ||||| || |||||||||||| | ||||||||||| |||| ||||| ||||| |
|
|
| T |
23760030 |
aataatgatctatctctagcttgattacttaggttaaacctattacctaattcggagttaaaagccagggttagtggtcattcaatttctatgatcaata |
23760129 |
T |
 |
| Q |
421 |
tgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactagacttttattgat-atga |
519 |
Q |
| |
|
|||| | | | | ||||||| | ||||| || |||||| || || || ||| || || |||||||||||||||||| ||||| ||| || | | |
|
|
| T |
23760130 |
tgcatattcacgacgctaggattaatagtctatcataaacgtacataaggtactaagcacaaagtaatatgaataaaaactaaactttcattaatgttca |
23760229 |
T |
 |
| Q |
520 |
taggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
|||| ||||||||||||| ||||||||| |||||||||| |||||||| |
|
|
| T |
23760230 |
aaggagttcaacaaattagggttcccataggattacatcagattcatct |
23760278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 106 - 568
Target Start/End: Complemental strand, 33313033 - 33312570
Alignment:
| Q |
106 |
atggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaat |
205 |
Q |
| |
|
||||||||| | |||||||||||||||| ||| ||||||||||||| ||||| || || |||||||||| ||||| ||||| |||||| |||||| |
|
|
| T |
33313033 |
atggttaagtccttcgaatcctctgaagctctcctatggtaatttgctttcctaattcaatcaatgattatttagtttcacgacgaattaacttagtaat |
33312934 |
T |
 |
| Q |
206 |
tttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatc |
305 |
Q |
| |
|
| |||||||||| ||||||||||||||| |||| || | |||| || |||||||||||||||||||||||||| |||||| |||| || |||||||| |
|
|
| T |
33312933 |
tctacccaatcttttgacctagaattctccccgcaagtgacaaccccttaatctcttaaatgaattcgaaaccggcggaggtattaaaagaacgttaatc |
33312834 |
T |
 |
| Q |
306 |
cctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaa |
405 |
Q |
| |
|
| ||| ||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||| ||||||||||| | | ||||||||||| |||| |
|
|
| T |
33312833 |
catatgtcataacctaataatgatctatctctagcttgattacttaggttaaacatattacctagttcagagttaaaagtcagggttagtggtcattcaa |
33312734 |
T |
 |
| Q |
406 |
gttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactagac |
505 |
Q |
| |
|
||||| ||||| |||| | | || |||||||| | ||||| || ||||||||| || |||||||| ||| ||||||||||||| |||| | |
|
|
| T |
33312733 |
tttctatgatcaatatgcatattcataaagctagggttaatagtcgatgataaacatacataaggcattaaacacaaggtaatatgaataaagactaaat |
33312634 |
T |
 |
| Q |
506 |
ttttattgat-atgataggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
||| ||| || | | ||| ||||||||||||| |||||| || |||||||||| |||||||| |
|
|
| T |
33312633 |
tttcattaatgttcaatggagttcaacaaattagggttcccgtaggattacatcagattcatct |
33312570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 104 - 580
Target Start/End: Complemental strand, 9765842 - 9765361
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacga---------cagatt |
194 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| |||| |||||| |
|
|
| T |
9765842 |
gtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttcacgagtttcacggcagatt |
9765743 |
T |
 |
| Q |
195 |
aacaaagtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaaca |
294 |
Q |
| |
|
|||||||||| | ||||||||||||||||||| |||||| || | || ||| | || |||||||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
9765742 |
aacaaagtaactctacccaatctcttgacctataattctccctgcaagtaaaatacccttaatctcttaagtgaattcgaaaccattagaggttttaaca |
9765643 |
T |
 |
| Q |
295 |
gtccgttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttag |
394 |
Q |
| |
|
| ||| ||| ||| ||||||||||||||| |||||||||||||| |||||||| ||||||| | |||||| ||||| ||||| | | ||||| |
|
|
| T |
9765642 |
aaacattagtccttatgtcataacctaataatcatctatctctagcttgattacttaagttaaacttattacctagaccagagtcaaaagtcagggttag |
9765543 |
T |
 |
| Q |
395 |
tggtcaatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaat |
494 |
Q |
| |
|
|||||| |||| || ||||| |||| | || |||||||| | ||||| || ||||||| ||| ||||||||||| |||||||||| |
|
|
| T |
9765542 |
tggtcattcaa--tc---gatcaatttgcatatccataaagctagggttaatagtcgatggtaaacatgcaaaacgcattaaacataaagtaatatgaat |
9765448 |
T |
 |
| Q |
495 |
aaaaactagacttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaacca |
580 |
Q |
| |
|
|||||||||||||||||| ||| | | || | ||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
9765447 |
aaaaactagacttttattcatattcaaagaagttcaacaaattagggttctcataggattacatcatattcatctaagtctcaacca |
9765361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 580
Target Start/End: Complemental strand, 23108132 - 23107554
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaaa |
100 |
Q |
| |
|
|||||||||||| ||||||| | || ||||| || ||||||| || ||||||||||||| |||||||||||||||| || |||||| |||||||| | |
|
|
| T |
23108132 |
aaaggatgtatttaattcaaggatgtcctagacagttgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggtttta-gaaaattaga |
23108034 |
T |
 |
| Q |
101 |
gaggtatg--gttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaaca |
198 |
Q |
| |
|
||| ||| |||||||| |||||||| || |||| ||| |||||||||||||||||||| || || |||||||||| ||||| || |||||||||| |
|
|
| T |
23108033 |
gagaaatgtggttaagaccttcgaatcatccgaagctctcctatggtaatttgcactcctagttcaaacaatgattatttagtttcacaacagattaact |
23107934 |
T |
 |
| Q |
199 |
aagtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtcc |
298 |
Q |
| |
|
||||| | |||||||| ||||| ||| |||||| |||| || | |||| || |||||||||||| ||||||||||| || ||||| |||| || | |
|
|
| T |
23107933 |
tagtaactctacccaattccttgagctataattctccccgcaagtgacaaccccttaatctcttaagtgaattcgaaattgtttgaggtattaaaagaac |
23107834 |
T |
 |
| Q |
299 |
gttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggt |
398 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||||||||| ||| |||||||||||||||| | |||||||| ||||| ||||| | | || |||||| |
|
|
| T |
23107833 |
gttaatccctatgtcataacctaataatgatctatctctaacttgattacttaggttaaacctattacctagttcagagtcaaaagtctgggtcagtggt |
23107734 |
T |
 |
| Q |
399 |
caatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaa |
498 |
Q |
| |
|
|| |||| |||| |||| |||| | | || | | |||| | ||||| || |||||||| |||| |||||||| || ||||||||||||| |
|
|
| T |
23107733 |
cattcaatctctactatcaatttgcatattcataacgttagggttaatagtcgatgataaacatgcaaaaagcattaaacaaaaagtaatatgaataaag |
23107634 |
T |
 |
| Q |
499 |
actagacttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaacca |
580 |
Q |
| |
|
|||| ||||| ||||| | | | |||| |||||||| || ||| | |||||||||||||| |||||||||||||||||||| |
|
|
| T |
23107633 |
actaaactttcattgaaattcaaaggagttcaacaa---agggtttctataagattacatcaaattcatctaagtctcaacca |
23107554 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 24 - 514
Target Start/End: Original strand, 36222433 - 36222918
Alignment:
| Q |
24 |
tgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaa-agaggtatggttaagacattcga |
122 |
Q |
| |
|
||||||||||| ||||||| ||| || |||||||||| |||||||||||| ||| || ||||||| ||| ||| | ||| ||||||||||| | ||||| |
|
|
| T |
36222433 |
tgccctaggcagttgagttgatt-ttctaacataaactgattaaaaacaaagaaagattggtttttagaagattgagagaagtatggttaagtccttcga |
36222531 |
T |
 |
| Q |
123 |
atcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctcttga |
222 |
Q |
| |
|
|||||| |||||||| ||||||||||| |||||||| || || |||||||||| ||||| || ||| |||||| |||||||||||| |||||||||| |
|
|
| T |
36222532 |
atcctccgaagttctcctatggtaattttcactcctagttcaatcaatgattatttagtttcactacaaattaacttagtaattttacctaatctcttga |
36222631 |
T |
 |
| Q |
223 |
cctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacctaa |
322 |
Q |
| |
|
||||||||||| | | | |||| || |||||||||||| ||||||||||||| ||||| || || | || |||||||| |||| ||||||||||| |
|
|
| T |
36222632 |
cctagaattctcc-----agtgacaaccccttaatctcttaagtgaattcgaaaccgttggaagtattta-agaacgttaatctctatgtcataacctaa |
36222725 |
T |
 |
| Q |
323 |
taattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcctg |
422 |
Q |
| |
|
|||| |||||||||| ||| ||||||||||||||| | | |||||| |||||||||||| | ||||||||||| |||| ||| | ||||| || |
|
|
| T |
36222726 |
taatgatctatctctaacttgattacttaggttaaatctattagctagttcagagttaaaagcgagggttagtggtcattcaatttccatgatcaatatg |
36222825 |
T |
 |
| Q |
423 |
caaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaa-taaaaactagacttttattga |
514 |
Q |
| |
|
|| | || |||||||| || |||||| || ||||||||| |||| |||||||| ||| ||||||||| |||| |||| ||||| ||||| |
|
|
| T |
36222826 |
catgttcataaagctagggctagtagtcgatgataaacatacaaaaagcattaaacacaaggtaatatgaattaaagactaaactttcattga |
36222918 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 23313361 - 23313671
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaaa |
100 |
Q |
| |
|
|||||||||||||||||||| | ||||||||| | |||| || ||| ||||||||||||| |||||||||||||||| | |||||| |||||||| | |
|
|
| T |
23313361 |
aaaggatgtattaaattcaagggtgccctaggtagttgaattgatttttgtaacataaacgaattaaaaacaataaaagaatggtttta-gaaaattaga |
23313459 |
T |
 |
| Q |
101 |
gag--gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaaca |
198 |
Q |
| |
|
||| ||||||||||||| || |||||||| |||||||| |||||||||||||||| ||| || || |||||||||||||| | || ||| ||||||| |
|
|
| T |
23313460 |
gagaagtatggttaagacctttgaatcctccgaagttctcctatggtaatttgcactactaattcaaacaatgattatctaggttcacaacatattaaca |
23313559 |
T |
 |
| Q |
199 |
aagtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtcc |
298 |
Q |
| |
|
|||| | |||||||||||||| ||||||||||| |||| || | || || |||||||||||| ||||||| ||| | |||||||||||||||| | |
|
|
| T |
23313560 |
ctgtaactctacccaatctcttggcctagaattctccccgcaagtggaaaccccttaatctcttaagtgaattcaaaatcgttggaggttttaacagaac |
23313659 |
T |
 |
| Q |
299 |
gttaatccctat |
310 |
Q |
| |
|
||||| |||||| |
|
|
| T |
23313660 |
gttaacccctat |
23313671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 390 - 580
Target Start/End: Original strand, 23313692 - 23313883
Alignment:
| Q |
390 |
gttagtggtcaatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataata |
489 |
Q |
| |
|
||||||||||| |||| |||||||||| |||| | | || |||||||| |||||||| || ||||||||| |||| ||||||||||| ||| | |
|
|
| T |
23313692 |
gttagtggtcattcaatctctaagatcaatttgcatattcataaagctagggtttgtagtcgatgataaacatacaaaaagcattaaacataaagtaaca |
23313791 |
T |
 |
| Q |
490 |
tgaataaaaactagacttttattgatatg-ataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaacca |
580 |
Q |
| |
|
|||||||| |||||||||| |||||||| | |||| || |||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
23313792 |
tgaataaagactagactttcattgatattcaaaggagtttaacaaattagagttcccataagattacatcggattcatctaagtctcaacca |
23313883 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 586 - 667
Target Start/End: Original strand, 26809172 - 26809253
Alignment:
| Q |
586 |
gaaattagctagacatagaaatataaataaatagcatggaaaataaaattaaccatgaaaccatgttgttcctcatttctct |
667 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| || ||||||||||| |||||| |
|
|
| T |
26809172 |
gaaattagctagacatagagatacaaataaatagcatggaaaataaaattaaccatgaaaacaggttgttcctcaattctct |
26809253 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 2719435 - 2719331
Alignment:
| Q |
253 |
ttaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacctaataattgtctatctctagcttaattacttag |
352 |
Q |
| |
|
|||||||||||| ||||||| ||||| ||||||||||| | || |||||||| || |||||||| ||| |||||||||||||||||||||||| ||| |
|
|
| T |
2719435 |
ttaatctcttaagtgaattcaaaaccgttggaggtttttatagatcgttaatctataaatcataacttaacaattgtctatctctagcttaattaattaa |
2719336 |
T |
 |
| Q |
353 |
gttaa |
357 |
Q |
| |
|
||||| |
|
|
| T |
2719335 |
gttaa |
2719331 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 253 - 344
Target Start/End: Complemental strand, 27796726 - 27796634
Alignment:
| Q |
253 |
ttaatctcttaaatgaattcgaaaccattggaggttttaacagtccgt--taatccctatatcataacctaataattgtctatctctagcttaa |
344 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||||||| || || | ||||| ||| |||||||| ||| ||||||||||||||||||||| |
|
|
| T |
27796726 |
ttaatctcttaagtgaattcgaaaccgttggaggttttaa-agaccattataatcgctaaatcataacttaacaattgtctatctctagcttaa |
27796634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 485 - 580
Target Start/End: Original strand, 35773117 - 35773213
Alignment:
| Q |
485 |
taatatgaataaaaactagacttttattgatatg-ataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaacca |
580 |
Q |
| |
|
|||||||||||||||||| ||||| ||||| || | | || |||||||||||||||||| ||| |||||||| | |||||||| ||||||||||| |
|
|
| T |
35773117 |
taatatgaataaaaactaaactttcattgacattcaaatgagttcaacaaattagagttcttataggattacataagattcatctcagtctcaacca |
35773213 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22083300 - 22083341
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtt |
42 |
Q |
| |
|
||||||| |||||||||||||| ||||||||||| ||||||| |
|
|
| T |
22083300 |
aaaggatatattaaattcaatggtgccctaggcagttgagtt |
22083341 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 245 - 345
Target Start/End: Original strand, 26075710 - 26075810
Alignment:
| Q |
245 |
acaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacctaataattgtctatctctagcttaa |
344 |
Q |
| |
|
||||| |||||||||||||| || || || |||| || ||||| || || ||||||| ||||||||||||| ||||||| |||||||||| ||||| |
|
|
| T |
26075710 |
acaatacattaatctcttaagtgcatccgtaaccgttaaaggttatagttgtgcgttaattcctatatcataactcaataattttctatctctaacttaa |
26075809 |
T |
 |
| Q |
345 |
t |
345 |
Q |
| |
|
| |
|
|
| T |
26075810 |
t |
26075810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 245 - 345
Target Start/End: Original strand, 26099497 - 26099597
Alignment:
| Q |
245 |
acaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacctaataattgtctatctctagcttaa |
344 |
Q |
| |
|
||||| |||||||||||||| || || || |||| || ||||| || || ||||||| ||||||||||||| ||||||| |||||||||| ||||| |
|
|
| T |
26099497 |
acaatacattaatctcttaagtgcatccgtaaccgttaaaggttatagttgtgcgttaattcctatatcataactcaataattttctatctctaacttaa |
26099596 |
T |
 |
| Q |
345 |
t |
345 |
Q |
| |
|
| |
|
|
| T |
26099597 |
t |
26099597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 22)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 104 - 568
Target Start/End: Complemental strand, 13493303 - 13492838
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagta |
203 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
13493303 |
gtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacaaagta |
13493204 |
T |
 |
| Q |
204 |
attttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaa |
303 |
Q |
| |
|
||| |||||||||||||||||||||||||| |||| | | |||| || |||||||||||| ||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
13493203 |
attctacccaatctcttgacctagaattctccccgcatgtgacaaccccttaatctcttaagtgaattcgaaaccgttggaggttttaacagaacgttaa |
13493104 |
T |
 |
| Q |
304 |
tccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatc |
403 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| | |||||| | ||||| ||||||| | ||||||||||| || |
|
|
| T |
13493103 |
tccctatgtcataacctaataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggtcattc |
13493004 |
T |
 |
| Q |
404 |
aagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactag |
503 |
Q |
| |
|
|| |||||||||| |||| | | || |||||||| | |||||| || ||||||||| |||| ||||||||||| |||||||||| |||||||| |
|
|
| T |
13493003 |
aatctctaagatcaatttgcatattcataaagctagggttagtagtcgatgataaacatacaaaaagcattaaacataaagtaatatgaattaaaactag |
13492904 |
T |
 |
| Q |
504 |
acttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
||||| ||||||| | | |||| ||||||||| ||| |||||||||||||||||||| ||| |||| |
|
|
| T |
13492903 |
actttcattgatattcaaaggagttcaacaaactagggttcccataagattacatcaaatttatct |
13492838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 1 - 580
Target Start/End: Complemental strand, 34066489 - 34065908
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaaa |
100 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||| |||| || ||| ||||||||||||| |||||||||||||||| || |||||| |||||||| | |
|
|
| T |
34066489 |
aaaggatgtattaaattcaagggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattggtttta-gaaaattaga |
34066391 |
T |
 |
| Q |
101 |
gag--gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaaca |
198 |
Q |
| |
|
||| ||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||| || || |||||||||||||||| ||||| ||||||||| |
|
|
| T |
34066390 |
gagaagtatggttaagaccttcgaatcctccgaagttctcctatgataatttgcactcctaattcaatcaatgattatctagtttaacgatagattaaca |
34066291 |
T |
 |
| Q |
199 |
aagtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtcc |
298 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||||| ||| || | |||| || |||||||||||| ||||||||||||| |||||||||||||||| | |
|
|
| T |
34066290 |
aagtaattctacccaatctcttgaccttgaattctctccgcaagtgacaaccccttaatctcttaagtgaattcgaaaccgttggaggttttaacagaac |
34066191 |
T |
 |
| Q |
299 |
gttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggt |
398 |
Q |
| |
|
||||||| |||| ||||||||||||||| |||||||||| ||| |||||||||||||||| | |||||| | ||||| ||||||| | ||||||||| |
|
|
| T |
34066190 |
gttaatctctatgtcataacctaataatgatctatctctaacttgattacttaggttaaacttattacctaggtcagagtcaaaagccagggttagtggt |
34066091 |
T |
 |
| Q |
399 |
caatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaa |
498 |
Q |
| |
|
|| | || |||||||||| |||| | | || |||||||| | |||||| || |||||| || |||| ||||||||||| |||||||||| ||| |
|
|
| T |
34066090 |
catttaatctctaagatcaatttgcatattcataaagctagggttagtagtcgatgataaacgtacaaaaagcattaaacataacgtaatatgaattaaa |
34065991 |
T |
 |
| Q |
499 |
actagacttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaacca |
580 |
Q |
| |
|
|||||| ||| ||||||| | | | | ||||||||||||| ||||||||||||||||||| |||||| |||||| ||||| |
|
|
| T |
34065990 |
actagattttcattgatattcaaaaaagttcaacaaattaggattcccataagattacatcaagttcatcaaagtcttaacca |
34065908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 104 - 568
Target Start/End: Complemental strand, 13496028 - 13495563
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagta |
203 |
Q |
| |
|
||||||||||||| || |||||||| |||||||| |||||||||||||||||||| || || ||||||||||||| || ||||||||||||| |||||| |
|
|
| T |
13496028 |
gtatggttaagacctttgaatcctccgaagttctcctatggtaatttgcactcctaattcaatcaatgattatctactttaacgacagattaagaaagta |
13495929 |
T |
 |
| Q |
204 |
attttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaa |
303 |
Q |
| |
|
||| || ||||||||||||||||||||||| |||| || | |||| || |||||||||||| ||||||||||||| |||||||||||| ||| |||||| |
|
|
| T |
13495928 |
attatatccaatctcttgacctagaattctacccgcaagtgacaaccccttaatctcttaagtgaattcgaaaccgttggaggttttagcagaacgttaa |
13495829 |
T |
 |
| Q |
304 |
tccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatc |
403 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| | |||||| | ||||| |||||| | ||||||||||| || |
|
|
| T |
13495828 |
tccctatgtcataacctaataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagctagggttagtggtcattc |
13495729 |
T |
 |
| Q |
404 |
aagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactag |
503 |
Q |
| |
|
|| |||||||||| |||| | | || |||||||| | |||||| || ||||||||| |||| ||||||||||| |||||||||| |||||||| |
|
|
| T |
13495728 |
aatctctaagatcaatttgcatattcataaagctagggttagtagtcgatgataaacatacaaaaagcattaaacataaagtaatatgaattaaaactag |
13495629 |
T |
 |
| Q |
504 |
acttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
||||| ||||||| | | |||| ||||||||| ||| ||||||||| |||||||||||||| |||| |
|
|
| T |
13495628 |
actttcattgatattcaaaggagttcaacaaactagggttcccataggattacatcatatttatct |
13495563 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 104 - 568
Target Start/End: Original strand, 27282312 - 27282777
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagta |
203 |
Q |
| |
|
||||||||||||| ||||||| ||| |||||||| |||||||||||||||||||| || ||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
27282312 |
gtatggttaagactttcgaattctccgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagttcaacgaccgattaacaaagta |
27282411 |
T |
 |
| Q |
204 |
attttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaa |
303 |
Q |
| |
|
||| |||||||||||||||||||||||||| |||| || | |||| || |||||||||||| ||||||| ||| | ||||||||||||| || |||||| |
|
|
| T |
27282412 |
attctacccaatctcttgacctagaattctccccgcaagtgacaaccccttaatctcttaagtgaattcaaaatcgttggaggttttaaaagaacgttaa |
27282511 |
T |
 |
| Q |
304 |
tccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatc |
403 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| | |||||| | ||||| |||| || | ||||||||||| || |
|
|
| T |
27282512 |
tccctatgtcataacctaataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaatccagggttagtggtcattc |
27282611 |
T |
 |
| Q |
404 |
aagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactag |
503 |
Q |
| |
|
|| |||||||||| | || | | || |||||||| | |||||| || ||||| ||| |||| ||||||||||| |||||||||| |||||||| |
|
|
| T |
27282612 |
aatctctaagatcaattttcatattcataaagctagggttagtagtcgatgataaagatacaaaaaggattaaacataaagtaatatgaattaaaactag |
27282711 |
T |
 |
| Q |
504 |
acttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
||||| ||||||| | | ||| ||||||||||||| ||||||||| ||||| |||| |||||||| |
|
|
| T |
27282712 |
actttcattgatattcaaaggtgttcaacaaattagggttcccataggattatatcagattcatct |
27282777 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 51 - 568
Target Start/End: Original strand, 32506005 - 32506523
Alignment:
| Q |
51 |
taacataaacagattaaaaacaataaaatataggttttttgaaaattaaagag--gtatggttaagacattcgaatcctctgaagttctattatggtaat |
148 |
Q |
| |
|
|||||||||| |||||||||||||||| | |||||| ||| |||| |||| || |||||||||| ||||||||||| |||||||| ||||||||| |
|
|
| T |
32506005 |
taacataaacgaattaaaaacaataaaagtt-ggttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatggtaat |
32506103 |
T |
 |
| Q |
149 |
ttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctcttgacctagaattcttcccggaaataacaa |
248 |
Q |
| |
|
||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| || | |||| |
|
|
| T |
32506104 |
ttgcactcctaattcaagcaatgattatctagtttaacgacagattaacaaagtaattctacccaatctcttgacctagaattctccccgcaagtgacaa |
32506203 |
T |
 |
| Q |
249 |
tccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacctaataattgtctatctctagcttaattac |
348 |
Q |
| |
|
|| |||||||||||| ||||||||||||| |||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
32506204 |
ccccttaatctcttaagtgaattcgaaaccgttggaggtattaacagaacgttaatccctatgtcataacctaataatgacctatctctagcttgattac |
32506303 |
T |
 |
| Q |
349 |
ttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtag |
448 |
Q |
| |
|
||| ||||||| | |||||| | ||||| ||||| | | ||||||||||| |||| ||||||||| |||| | | || |||||||| | |||| |
|
|
| T |
32506304 |
ttaagttaaacttattacctagatcagagtcaaaagtcagggttagtggtcattcaatctctaagatcgatttgcatattcataaagctagggttagtag |
32506403 |
T |
 |
| Q |
449 |
tcaataataaacataagaaaattattaaacataagataatatgaataaaaactagacttttattgatat---gataggaattcaacaaattagagttccc |
545 |
Q |
| |
|
|| || ||||||||| |||| ||||||||||| |||||| | ||||||||||||| |||||||| | |||| ||||||||| ||| |||||| |
|
|
| T |
32506404 |
tcgatgataaacatacaaaaaacattaaacataaagtaatat---ttaaaactagactttcattgatattcaaaaaggagttcaacaaactagggttccc |
32506500 |
T |
 |
| Q |
546 |
ataagattacatcatattcatct |
568 |
Q |
| |
|
||| |||||||||| |||||||| |
|
|
| T |
32506501 |
ataggattacatcagattcatct |
32506523 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 1 - 359
Target Start/End: Complemental strand, 39546388 - 39546028
Alignment:
| Q |
1 |
aaaggatgtattaaattcaat-gttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaa |
99 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| ||| || || ||||||| ||||| | |||||||||||| | |||||| || |||| |
|
|
| T |
39546388 |
aaaggatgtattaaattcaattgttgccctaggcagttggattggtttttgtaacgtaaacgcaaataaaacaataaaagtt-ggttttaaaaatattag |
39546290 |
T |
 |
| Q |
100 |
agag--gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaac |
197 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||| ||||||||||||| |
|
|
| T |
39546289 |
agagaagtatggttaagaccttcgaatcctccgaagttctcatatggtaatttgcactcctaattcaagcaatgattatctagtttcacgacagattaac |
39546190 |
T |
 |
| Q |
198 |
aaagtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtc |
297 |
Q |
| |
|
||||||| | |||||||||||||||||||||||||| |||| || |||||| || |||||||||||| ||||||||||| | ||||||||||||| || |
|
|
| T |
39546189 |
aaagtaactctacccaatctcttgacctagaattctccccgcaagtaacaaccccttaatctcttaagtgaattcgaaatcgttggaggttttaatagaa |
39546090 |
T |
 |
| Q |
298 |
cgttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaac |
359 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||| |
|
|
| T |
39546089 |
cgttaatccctatgtcataacctaataatgatctatctctagcttgattacttaagttaaac |
39546028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 1 - 580
Target Start/End: Original strand, 16190279 - 16190858
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaaa |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| ||||||||| || ||||||||||||| ||||||||||||||| || |||||| |||||||||| |
|
|
| T |
16190279 |
aaaggatgtattaaattcaatggtgccctaggaaattgagttgatgtttgtaacataaacgaattaaaaacaataaag-attggtttta-gaaaattaaa |
16190376 |
T |
 |
| Q |
101 |
gag--gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaaca |
198 |
Q |
| |
|
||| ||||||||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
16190377 |
gagaagtatggttaagaccttcgaatcctccgaagttctcctatgataatttgcactcttaattcaagcaatgattatctagtttaacgacaaattaaca |
16190476 |
T |
 |
| Q |
199 |
aagtaat-tttacccaatctcttgacctagaattcttcccggaaataacaatcc----attaatctcttaaatgaattcgaaaccattggaggttttaac |
293 |
Q |
| |
|
|| |||| | ||||||||||||||||| | |||||| ||| | | |||| || ||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
16190477 |
aaataatatatacccaatctcttgacccataattctccccacgagtgacaaccccttaattaatctcttaagtgaattcgaaaccgttggaggtt----- |
16190571 |
T |
 |
| Q |
294 |
agtccgttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgtta |
393 |
Q |
| |
|
||||||||||| ||||||||||||| | |||||||||| ||| |||||||||||||||| | |||||| | ||||||||||||| |||| |
|
|
| T |
16190572 |
------ttaatccctatgtcataacctaatattgatctatctctaacttgattacttaggttaaacttattacctagatcagagttaaaagccaaggtta |
16190665 |
T |
 |
| Q |
394 |
gtggtcaatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaa |
493 |
Q |
| |
|
||||||| ||| |||| ||||| |||| | | || |||||| | | |||||| || ||||||||| |||| ||||||||||| |||||| || |
|
|
| T |
16190666 |
gtggtcatccaatctctaggatcaatttgcatattcataaagctaaggttagtagtcgatgataaacatacaaaaagcattaaacataaagtaatataaa |
16190765 |
T |
 |
| Q |
494 |
taaaaactagacttttattgat------atgataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaacca |
580 |
Q |
| |
|
| ||||||||||||| |||||| || | |||| ||||||||||||| ||||| |||||||||||||| ||||||||||| |||||||| |
|
|
| T |
16190766 |
ttaaaactagactttcattgatattcaaattaaaggagttcaacaaattagggttcctataagattacatcagattcatctaagactcaacca |
16190858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 5 - 580
Target Start/End: Complemental strand, 1936770 - 1936191
Alignment:
| Q |
5 |
gatgtattaaattcaatg--ttgccctaggcaattgagtttattcttgtaacataaacaga-ttaaaaacaataaaatataggttttttgaaaattaaag |
101 |
Q |
| |
|
|||||||||||||||||| ||| |||||||| ||||||| ||| ||||| ||||||| || |||||||| |||||| | |||||| |||||||| || |
|
|
| T |
1936770 |
gatgtattaaattcaatgggttgacctaggcagttgagttgattgttgtatcataaactgaattaaaaacggtaaaattttggtttta-gaaaattagag |
1936672 |
T |
 |
| Q |
102 |
ag--gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaa |
199 |
Q |
| |
|
|| ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| || || |||||||||||||| | |||| |||||||||| |
|
|
| T |
1936671 |
agaagtatggttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcctagttcaatcaatgattatctagcttcacgaaagattaacaa |
1936572 |
T |
 |
| Q |
200 |
agtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccg |
299 |
Q |
| |
|
||||| | |||| |||||||||| || | |||| |||| || ||||||||| |||||||||||| |||||| |||| | || |||||||||| || | |
|
|
| T |
1936571 |
agtaactctaccaaatctcttgatttatagttctccccgcaagtaacaatcccttaatctcttaagtgaatttgaaa-cgtttgaggttttaaaagaatg |
1936473 |
T |
 |
| Q |
300 |
ttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtc |
399 |
Q |
| |
|
||| ||||||| ||||||||||||||| |||||||||||| | |||||||||||||||| | |||| | | | | | |||||| |||||||||| |
|
|
| T |
1936472 |
ttattccctatgtcataacctaataatgatctatctctagcatgattacttaggttaaacttattacctggatcaaattcgaaagccatggttagtggtc |
1936373 |
T |
 |
| Q |
400 |
aatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaa |
499 |
Q |
| |
|
| | || |||||||||| | || | | || ||| |||| | |||||| || ||||||||| |||| ||||||||||| |||||||||| |||| |
|
|
| T |
1936372 |
atttaatctctaagatcaattttcatattcataaagttagggttagtagtcgatgataaacatacaaaaagcattaaacataaagtaatatgaattaaaa |
1936273 |
T |
 |
| Q |
500 |
ctagacttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaacca |
580 |
Q |
| |
|
|||||||| ||||||| | | |||| |||||||||||| |||||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
1936272 |
ctagacttccattgatattcaaaggagttcaacaaattatggttcccataagattacatgagattcatctaagtctcaacca |
1936191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 105 - 413
Target Start/End: Complemental strand, 21153295 - 21152987
Alignment:
| Q |
105 |
tatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaa |
204 |
Q |
| |
|
|||||||||||| ||||||||||| || | ||| |||||||||||||| || | || || ||||| | || ||||| ||||||||||||||| ||||| |
|
|
| T |
21153295 |
tatggttaagaccttcgaatcctccgatgctcttaaatggtaatttgcacccccaattcaatcaatgttcatttagtttaacgacagattaacacagtaa |
21153196 |
T |
 |
| Q |
205 |
ttttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaat |
304 |
Q |
| |
|
|| ||| |||||||||||||||||||||| ||| || | |||| || |||||||||||| |||||| |||||| ||||||||||||| ||||||||||| |
|
|
| T |
21153195 |
ttctactcaatctcttgacctagaattctctccgcaagtgacaaccccttaatctcttaagtgaatttgaaacctttggaggttttaatagtccgttaat |
21153096 |
T |
 |
| Q |
305 |
ccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatca |
404 |
Q |
| |
|
||||| ||||||||||||||| |||||||||||||||||||||||||||||||| || ||||| | ||||| ||||| | | | ||||||||| ||| |
|
|
| T |
21153095 |
ccctaaatcataacctaataactgtctatctctagcttaattacttaggttaaatatattccctagatcagagtcaaaagtcagggctagtggtcattca |
21152996 |
T |
 |
| Q |
405 |
agttctaag |
413 |
Q |
| |
|
||||||||| |
|
|
| T |
21152995 |
agttctaag |
21152987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 172 - 405
Target Start/End: Original strand, 23990361 - 23990594
Alignment:
| Q |
172 |
attatctagttaaacgacagattaacaaagtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaatt |
271 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||| |||| || | |||| || |||| ||||||| |||||| |
|
|
| T |
23990361 |
attatctagttcaacgacagattaacaaagtaattctacccaatcacttgacctagaattctccccgcaagtgacaaccccttaaactcttaagtgaatt |
23990460 |
T |
 |
| Q |
272 |
cgaaaccattggaggttttaacagtccgttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagt |
371 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| || ||||||||||| |||||||||||||||| | |||||| |
|
|
| T |
23990461 |
cgaaaccgttggaggttttaacagaacgttaatccctatgtcataacctaataatgatcaatctctagcttgattacttaggttaaacttattacctaga |
23990560 |
T |
 |
| Q |
372 |
ttagagttaaaagccggtgttagtggtcaatcaa |
405 |
Q |
| |
|
| ||||| ||||||| | ||||||||||| |||| |
|
|
| T |
23990561 |
tcagagtcaaaagccagggttagtggtcattcaa |
23990594 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 179 - 408
Target Start/End: Original strand, 22453415 - 22453644
Alignment:
| Q |
179 |
agttaaacgacagattaacaaagtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaacc |
278 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| || | |||| || |||||||||||| |||||||||||| |
|
|
| T |
22453415 |
agtttaacgacagattaacaaagtaattctacccaatctcttgacctagaattctctccgcaagtgacaaccccttaatctcttaagtgaattcgaaact |
22453514 |
T |
 |
| Q |
279 |
attggaggttttaacagtccgttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagt |
378 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||| | ||||| |
|
|
| T |
22453515 |
gttggaggttttaacagtccgttaatccatgagtcataacctaataattttctatctctagcttaattacttaggttaaacctattacctaaatcagagt |
22453614 |
T |
 |
| Q |
379 |
taaaagccggtgttagtggtcaatcaagtt |
408 |
Q |
| |
|
||||||| | | ||||||||| ||||||| |
|
|
| T |
22453615 |
caaaagccagggctagtggtcattcaagtt |
22453644 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 106 - 418
Target Start/End: Original strand, 22456699 - 22457009
Alignment:
| Q |
106 |
atggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaat |
205 |
Q |
| |
|
||||| ||||| ||||||||||| |||||||| ||||| |||||| || |||||| || ||||| | ||||||| ||||||||| |||||||||||| |
|
|
| T |
22456699 |
atggtcaagaccttcgaatcctccgaagttctcctatggaaatttgtacccctattc-aatcaatgttcgtctagtttaacgacagactaacaaagtaat |
22456797 |
T |
 |
| Q |
206 |
tttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatc |
305 |
Q |
| |
|
| |||||||||||||||||||||||||| ||| || | |||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
22456798 |
tctacccaatctcttgacctagaattctctccgcaagtgacaactc-ttaatctcttaagtgaattcgaaactgttggaggttttaacagtccgttaatc |
22456896 |
T |
 |
| Q |
306 |
cctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaa |
405 |
Q |
| |
|
| | |||||||||||||||| ||||||||| ||||||||||||||||||||| | ||||| ||||| ||||| | | | ||||||||| |||| |
|
|
| T |
22456897 |
catgagtcataacctaataattttctatctcttgcttaattacttaggttaaacctattacctaaaacagagtcaaaagtcagggctagtggtcattcaa |
22456996 |
T |
 |
| Q |
406 |
gttctaagatcag |
418 |
Q |
| |
|
||||||||||||| |
|
|
| T |
22456997 |
gttctaagatcag |
22457009 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 105 - 417
Target Start/End: Complemental strand, 15297371 - 15297060
Alignment:
| Q |
105 |
tatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaa |
204 |
Q |
| |
|
|||| ||||||| ||||||||||| || ||||| | |||||||||||| || ||| || |||| | |||||||| ||||||||||||||||||||| |
|
|
| T |
15297371 |
tatgattaagaccttcgaatcctccgatgttcttccacggtaatttgcaccccaattc-aatcaatattcatctagtttaacgacagattaacaaagtaa |
15297273 |
T |
 |
| Q |
205 |
ttttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaat |
304 |
Q |
| |
|
|| |||||||||||||||||||||||||| | | || | |||| || | |||||||||| |||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
15297272 |
ttctacccaatctcttgacctagaattctctctgcaagtgacaacccttaaatctcttaagtgaatttgaaactgttggaggttttaacagtccgttaat |
15297173 |
T |
 |
| Q |
305 |
ccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatca |
404 |
Q |
| |
|
|| | |||||||||||||||| |||||||||| ||||||||||||||||||| | |||||| | ||| | ||||||| | | ||||||||| ||| |
|
|
| T |
15297172 |
ccatgagtcataacctaataattttctatctctaacttaattacttaggttaaaactattacctagatcagattcaaaagccagagctagtggtcattca |
15297073 |
T |
 |
| Q |
405 |
agttctaagatca |
417 |
Q |
| |
|
||||||||||||| |
|
|
| T |
15297072 |
agttctaagatca |
15297060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 10764960 - 10764831
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagta |
203 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| || ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
10764960 |
gtatggttaagaccttcgaatcctctgaagttctcctatggtaacttgcactcctaattcaagcaatgattatctagtttaacgacagattaacaaagta |
10764861 |
T |
 |
| Q |
204 |
attttacccaatctcttgacctagaattct |
233 |
Q |
| |
|
||| |||||||||||||||||||||||||| |
|
|
| T |
10764860 |
attctacccaatctcttgacctagaattct |
10764831 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 211 - 417
Target Start/End: Original strand, 22104683 - 22104887
Alignment:
| Q |
211 |
ccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctat |
310 |
Q |
| |
|
||||||||||||||||||||||| |||| || | ||| || |||||||||||| ||||||| ||| | |||||||| |||| || ||||||||||||| |
|
|
| T |
22104683 |
ccaatctcttgacctagaattctccccgtaagtgacagacc-ttaatctcttaagtgaattcaaaatcgttggaggtattaa-agaacgttaatccctat |
22104780 |
T |
 |
| Q |
311 |
atcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttct |
410 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||||||||||||| | || ||||| |||||||||| || | |||||||||| |||| |||| |
|
|
| T |
22104781 |
gtcataacctaataatgatctatctctagcttgattacttaggttaaacctattacatagttcagagttaaaaaccagaattagtggtcattcaatttct |
22104880 |
T |
 |
| Q |
411 |
aagatca |
417 |
Q |
| |
|
| ||||| |
|
|
| T |
22104881 |
atgatca |
22104887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 266 - 355
Target Start/End: Original strand, 4204979 - 4205068
Alignment:
| Q |
266 |
tgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacctaataattgtctatctctagcttaattacttaggtt |
355 |
Q |
| |
|
||||||||||||| ||||||||||||| |||||||||||||||| | |||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
4204979 |
tgaattcgaaaccgttggaggttttaatagtccgttaatccctaaactataacctagcaattgtctatctctagcttaattgattaggtt |
4205068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 23990235 - 23990322
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggtttt |
88 |
Q |
| |
|
||||||||||||||||||| | ||| ||||||| ||||||| ||| |||||||||| || ||||||||||||||||| ||||||||| |
|
|
| T |
23990235 |
aaaggatgtattaaattcagtaatgctctaggcagttgagttaatttttgtaacatatacggattaaaaacaataaaagataggtttt |
23990322 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8435380 - 8435303
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaa |
78 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||||| ||| |||||||||||||| | |||||||||||||| |
|
|
| T |
8435380 |
aaaggatgtattaaattcaagagtgccctaggcagttgagttgatttttgtaacataaacataataaaaacaataaaa |
8435303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 106 - 218
Target Start/End: Complemental strand, 49147936 - 49147825
Alignment:
| Q |
106 |
atggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaat |
205 |
Q |
| |
|
||||| ||||| ||||||||||| |||||||| ||||| |||||| || |||||| || ||||| | ||||||| |||||||||||||||||||||| |
|
|
| T |
49147936 |
atggtcaagaccttcgaatcctccgaagttctcctatggaaatttgtacccctattc-aatcaatgttcgtctagtttaacgacagattaacaaagtaat |
49147838 |
T |
 |
| Q |
206 |
tttacccaatctc |
218 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
49147837 |
tctacccaatctc |
49147825 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 450 - 568
Target Start/End: Complemental strand, 10759816 - 10759697
Alignment:
| Q |
450 |
caataataaacataagaaaattattaaacataagataatatgaataaaaactagacttttattgatatg-ataggaattcaacaaattagagttcccata |
548 |
Q |
| |
|
|||| ||||||||| |||| || |||||||| |||||||||| ||||||||||||| | |||||| | |||| ||||||||||||| ||||||||| |
|
|
| T |
10759816 |
caatgataaacatacaaaaagcataaaacataaagtaatatgaattaaaactagactttcaatgatattcaaaggagttcaacaaattagggttcccata |
10759717 |
T |
 |
| Q |
549 |
agattacatcatattcatct |
568 |
Q |
| |
|
|||||||||| |||||||| |
|
|
| T |
10759716 |
ggattacatcagattcatct |
10759697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 445 - 565
Target Start/End: Original strand, 23990633 - 23990754
Alignment:
| Q |
445 |
gtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactagacttttattgatatg-ataggaattcaacaaattagagttc |
543 |
Q |
| |
|
||||||||| ||||||||| |||| ||| || |||| ||||| ||||| ||||||||||||| | |||| | |||| ||||||||||||| |||| |
|
|
| T |
23990633 |
gtagtcaatgataaacatacaaaaaacattgaagataatataatgtgaattaaaactagactttcttaaatattcagaggagttcaacaaattagtgttc |
23990732 |
T |
 |
| Q |
544 |
ccataagattacatcatattca |
565 |
Q |
| |
|
||||||||||| |||| ||||| |
|
|
| T |
23990733 |
ccataagattaaatcagattca |
23990754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 344
Target Start/End: Original strand, 14546740 - 14546829
Alignment:
| Q |
255 |
aatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacctaataattgtctatctctagcttaa |
344 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||||| | |||||||||| ||| ||||||| ||| |||| || ||| ||||||||| |
|
|
| T |
14546740 |
aatctcttaaatgagttcgaaatatttggaggttttagtattccgttaatctctaaatcataatttaacaattatccatcactagcttaa |
14546829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 210; Significance: 1e-115; HSPs: 28)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 104 - 568
Target Start/End: Complemental strand, 14790659 - 14790194
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagta |
203 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
14790659 |
gtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacaaagta |
14790560 |
T |
 |
| Q |
204 |
attttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaa |
303 |
Q |
| |
|
||| |||||||||||||||||||||||||| |||| | | |||| || |||||||||||| ||||||||||||| ||||||||||||| || |||||| |
|
|
| T |
14790559 |
attctacccaatctcttgacctagaattctccccgcatgtgacaaccccttaatctcttaagtgaattcgaaaccgttggaggttttaaaagaacgttaa |
14790460 |
T |
 |
| Q |
304 |
tccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatc |
403 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| | |||||| | ||||| ||||||| | ||||||||||| | |
|
|
| T |
14790459 |
tccctatgtcataacctaataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggtcattt |
14790360 |
T |
 |
| Q |
404 |
aagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactag |
503 |
Q |
| |
|
|| ||||||||||| |||| | | || |||||||| | ||||||||| ||||||||| |||| || |||||||| |||||||||| |||||||| |
|
|
| T |
14790359 |
aatctctaagatcagtttgcatattcataaagctagggttagtagtcaatgataaacatacaaaaagcataaaacataaagtaatatgaattaaaactag |
14790260 |
T |
 |
| Q |
504 |
acttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
||||| | ||||| | | |||| ||||||||||||| ||||||||| |||||||||| |||||||| |
|
|
| T |
14790259 |
actttcaatgatattcaaaggagttcaacaaattagggttcccataggattacatcagattcatct |
14790194 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 104 - 568
Target Start/End: Complemental strand, 14795687 - 14795222
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagta |
203 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
14795687 |
gtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacaaagta |
14795588 |
T |
 |
| Q |
204 |
attttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaa |
303 |
Q |
| |
|
||| |||||||||||||||||||||||||| |||| | | |||| || |||||||||||| ||||||||||||| ||||||||||||| || |||||| |
|
|
| T |
14795587 |
attctacccaatctcttgacctagaattctccccgcatgtgacaaccccttaatctcttaagtgaattcgaaaccgttggaggttttaaaagaacgttaa |
14795488 |
T |
 |
| Q |
304 |
tccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatc |
403 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| | |||||| | ||||| ||||||| | ||||||||||| | |
|
|
| T |
14795487 |
tccctatgtcataacctaataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggtcattt |
14795388 |
T |
 |
| Q |
404 |
aagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactag |
503 |
Q |
| |
|
|| ||||||||||| |||| | | || |||||||| | ||||||||| ||||||||| |||| || |||||||| |||||||||| |||||||| |
|
|
| T |
14795387 |
aatctctaagatcagtttgcatattcataaagctagggttagtagtcaatgataaacatacaaaaagcataaaacataaagtaatatgaattaaaactag |
14795288 |
T |
 |
| Q |
504 |
acttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
||||| | ||||| | | |||| ||||||||||||| ||||||||| |||||||||| |||||||| |
|
|
| T |
14795287 |
actttcaatgatattcaaaggagttcaacaaattagggttcccataggattacatcagattcatct |
14795222 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 5 - 588
Target Start/End: Original strand, 20527266 - 20527852
Alignment:
| Q |
5 |
gatgtattaaattcaatg-ttgccctaggcaattgagtttattcttgtaacataaacagat-taaaaacaataaaatataggttttttgaaaattaaaga |
102 |
Q |
| |
|
|||||||||||||||| | |||||||||||| |||| || ||| ||||||| |||||| | |||||||||||||| | |||||| ||| |||| ||| |
|
|
| T |
20527266 |
gatgtattaaattcaaaggttgccctaggcagttgaattgatttttgtaacgtaaacataaataaaaacaataaaagtt-ggttttaagaatattagaga |
20527364 |
T |
 |
| Q |
103 |
g--gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaa |
200 |
Q |
| |
|
| ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| || || ||||||||||||| | |||||||||||||||| |
|
|
| T |
20527365 |
gaagtatggttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcctaattcaatcaatgattatctaacttcacgacagattaacaaa |
20527464 |
T |
 |
| Q |
201 |
gtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgt |
300 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||| || |||||| || |||||||||||| |||||| |||||| |||||||||||||||| ||| |
|
|
| T |
20527465 |
ttaactttacccaatctcttgacctagaattctccccgcaagtaacaa-cccttaatctcttaagtgaatttgaaaccgttggaggttttaacagaacgt |
20527563 |
T |
 |
| Q |
301 |
taatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtca |
400 |
Q |
| |
|
|||||||||| |||||| |||||||| |||||||||||||| |||||||||||||||| | |||||||| ||||| ||||||| | ||||||||||| |
|
|
| T |
20527564 |
taatccctatgtcataatctaataatgatctatctctagcttgattacttaggttaaacttattacctagttcagagtcaaaagccagggttagtggtca |
20527663 |
T |
 |
| Q |
401 |
atcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaac |
500 |
Q |
| |
|
|||| ||||| |||| |||| | | || |||||||| | | |||| || ||||||||| |||| |||||| |||| ||||||||||||| | |
|
|
| T |
20527664 |
ttcaatctctaaaatcaatttgcatattcataaagctagggttaggagtcgatgataaacatacaaaaagcattaaatataaagtaatatgaataaagat |
20527763 |
T |
 |
| Q |
501 |
tagacttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaaccaaaagagaa |
588 |
Q |
| |
|
|||||||| ||||||| | | |||| ||||||| |||| |||||||||| ||||||||| ||||||||| ||||||||||||| |||| |
|
|
| T |
20527764 |
tagactttcattgatattcaaaggagttcaacacattaaggttcccataaaattacatcagattcatctaggtctcaaccaaaaaagaa |
20527852 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 104 - 568
Target Start/End: Original strand, 32704459 - 32704923
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagta |
203 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
32704459 |
gtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacagagta |
32704558 |
T |
 |
| Q |
204 |
attttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaa |
303 |
Q |
| |
|
||| ||||||||||||||| ||||||||| |||| | | |||| || |||||||||||| ||||||||||||| ||||||||||||| || |||||| |
|
|
| T |
32704559 |
attctacccaatctcttgaaatagaattctccccgcatgtgacaaccccttaatctcttaagtgaattcgaaaccgttggaggttttaaaagaacgttaa |
32704658 |
T |
 |
| Q |
304 |
tccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatc |
403 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||| ||| |||||||||||||||| | || ||| | ||||| ||||||| | ||||||||||| | |
|
|
| T |
32704659 |
tccctatgtcataacctaataatgatctatctctatcttgattacttaggttaaacttattacttagatcagagtcaaaagccagggttagtggtcattt |
32704758 |
T |
 |
| Q |
404 |
aagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactag |
503 |
Q |
| |
|
|| ||||||||||| |||| | | || |||||||| | ||||||||| ||||||||| |||| ||||||||||| |||| ||| | |||||||| |
|
|
| T |
32704759 |
aatctctaagatcagtttgcatattcataaagctagggttagtagtcaatgataaacatacaaaaaacattaaacataaagtaat-tgacttaaaactag |
32704857 |
T |
 |
| Q |
504 |
acttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
||||| ||||||| | | |||| ||||||||||||| ||||||||| |||||||||| |||||||| |
|
|
| T |
32704858 |
actttcattgatattcaaaggagttcaacaaattagggttcccataggattacatcagattcatct |
32704923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 1 - 580
Target Start/End: Original strand, 19664766 - 19665346
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaaa |
100 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| ||| || | |||||| |||||| ||||||||||||||||| | ||||| |||||||| | |
|
|
| T |
19664766 |
aaaggatgtattaaattcaaggttgccctaggcagttggattggtatttgtaaaataaacggattaaaaacaataaaagtttggtttaa-gaaaattaga |
19664864 |
T |
 |
| Q |
101 |
gag--gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaaca |
198 |
Q |
| |
|
||| ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| || || |||||||||||||||| | ||||||||||||| |
|
|
| T |
19664865 |
gagatgtatggttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcctaattcaatcaatgattatctagttca-cgacagattaaca |
19664963 |
T |
 |
| Q |
199 |
aagtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtcc |
298 |
Q |
| |
|
|||||| | |||||||| |||||||||||| |||| |||| || ||||| || |||||||||||| ||||||||||| |||||||| |||||| || | |
|
|
| T |
19664964 |
aagtaactctacccaatatcttgacctagagttctccccgcaagtaacatccccttaatctcttaagtgaattcgaaatcattggagattttaatagaac |
19665063 |
T |
 |
| Q |
299 |
gttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggt |
398 |
Q |
| |
|
|||||||||||| |||||||||||| || |||||||||| ||| |||||||||||||||| | |||||| | ||| ||||||| | | ||||||| | |
|
|
| T |
19665064 |
gttaatccctatgtcataacctaat-atgatctatctctatcttgattacttaggttaaacctattacctagatcagaattaaaagtcagggttagtgat |
19665162 |
T |
 |
| Q |
399 |
caatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaac-ataagaaaattattaaacataagataatatgaataaa |
497 |
Q |
| |
|
|| |||| ||||| |||| |||| | | || |||||||| | |||||| || |||||| ||| |||| ||| |||| || ||||||||||||| |
|
|
| T |
19665163 |
cattcaatctctaacatcaatttgcatattcataaagctagggttagtagtcgatgataaacaatacaaaaagcatttaacacaaagtaatatgaataaa |
19665262 |
T |
 |
| Q |
498 |
aactagacttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaacca |
580 |
Q |
| |
|
||||||||||| ||||| | | | | || ||||||||||||| ||||||||| |||||||||| |||||||| ||||||||||| |
|
|
| T |
19665263 |
aactagactttcattgacattcaaatgagttcaacaaattagggttcccataggattacatcagattcatctcagtctcaacca |
19665346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 1 - 579
Target Start/End: Complemental strand, 16883820 - 16883241
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaaa |
100 |
Q |
| |
|
|||||||||||||||||||| | | ||||||||| |||| || ||| ||||||||||||| |||||||||||||||| || |||||| |||||||| | |
|
|
| T |
16883820 |
aaaggatgtattaaattcaagggttccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattggtttta-gaaaattaga |
16883722 |
T |
 |
| Q |
101 |
gag--gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaaca |
198 |
Q |
| |
|
||| |||||||||||||||||||||||| |||||||| |||||||||||||||| ||| || || ||||||||||||| | |||| ||||||||| |
|
|
| T |
16883721 |
gagaagtatggttaagacattcgaatccttcgaagttctcctatggtaatttgcactactaattcaaacaatgattatctatgttcacgaaagattaaca |
16883622 |
T |
 |
| Q |
199 |
aagtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtcc |
298 |
Q |
| |
|
| ||| |||||||||||||||||||||||||| ||| || | ||| || ||||||||||| ||||||| ||||| |||||||||||||||| | |
|
|
| T |
16883621 |
caataaccctacccaatctcttgacctagaattctccccacaagtggcaaccccttaatctcttatgtgaattcaaaaccgttggaggttttaacagaac |
16883522 |
T |
 |
| Q |
299 |
gttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggt |
398 |
Q |
| |
|
||||||||||| ||| |||||||||| |||||||||||||| |||||||||||||||| | |||||||| ||||| ||||| | ||||||||| |
|
|
| T |
16883521 |
attaatccctat-gcatcacctaataatgatctatctctagcttgattacttaggttaaacttattacctagttcagagtcaaaagtgagggttagtggt |
16883423 |
T |
 |
| Q |
399 |
caatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaa |
498 |
Q |
| |
|
|| |||| |||||||||| |||| | | || |||||||| | |||||| || ||||||||| |||| |||||| |||| ||| ||||||||| |
|
|
| T |
16883422 |
cattcaatctctaagatcaatttgcatattcataaagctagggttagtagtcgatgataaacatacaaaaagcattaaagataaagtaacatgaataaag |
16883323 |
T |
 |
| Q |
499 |
actagacttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaacc |
579 |
Q |
| |
|
|||||||||| ||||||| | | |||| ||||||||||||| |||| ||||| ||||||||| |||||| ||||||| |||| |
|
|
| T |
16883322 |
actagactttcattgatattcaaaggagttcaacaaattagggttctcataaaattacatcagattcatttaagtcttaacc |
16883241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 104 - 580
Target Start/End: Complemental strand, 1838514 - 1838037
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagta |
203 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||| |||| ||||| ||||||||| || || ||| |||||| ||||| |||||||||||||||||||| |
|
|
| T |
1838514 |
gtatggttaagaccttcgaatcctccgaagttctcctatg-taattcgcactcctagttcaatcaacgattatttagttcaacgacagattaacaaagta |
1838416 |
T |
 |
| Q |
204 |
attttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaa |
303 |
Q |
| |
|
| | ||||||||||||||||||||| |||| |||| || |||||| | |||||||||||| |||||| ||||||||||||| |||||||| |||||| |
|
|
| T |
1838415 |
actctacccaatctcttgacctagagttctccccgcaagtaacaactccttaatctcttaagtgaatttgaaaccattggagattttaacataacgttaa |
1838316 |
T |
 |
| Q |
304 |
tccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatc |
403 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| | |||||| | ||||| ||||| | | ||||||||||| || |
|
|
| T |
1838315 |
tccctatgtcataacctaataatgatctatctctagcttgattacttaggttaaacctattacctagatcagagtcaaaagtcagggttagtggtcattc |
1838216 |
T |
 |
| Q |
404 |
aagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaac-ataagaaaattattaaacataagataatatgaataaaaacta |
502 |
Q |
| |
|
|| ||||| |||| |||| | | || ||| |||| | |||||| || |||||| ||| |||| ||| |||| || |||||||||||||||||| |
|
|
| T |
1838215 |
aatctctaacatcaatttgcatattcataaagttagggttagtagtcgatgataaacaatacaaaaagcatttaacacaaagtaatatgaataaaaacta |
1838116 |
T |
 |
| Q |
503 |
gacttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaacca |
580 |
Q |
| |
|
|||||| ||||| | | | |||| ||||| ||||||| ||||||||| |||||||||| |||||||| ||||||||||| |
|
|
| T |
1838115 |
gactttcattgacattcaaaggagttcaataaattagggttcccataggattacatcagattcatctcagtctcaacca |
1838037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 24 - 568
Target Start/End: Original strand, 13017313 - 13017859
Alignment:
| Q |
24 |
tgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggtttttt-gaaaattaa-agaggtatggttaagacattcg |
121 |
Q |
| |
|
||||||||||| ||||||| ||| | ||||||||||| |||||||||||||||| || ||||||| ||||||| | ||| ||||||||||| | |||| |
|
|
| T |
13017313 |
tgccctaggcagttgagttgatt-tagtaacataaactgattaaaaacaataaagaattggtttttcagaaaattgagagaagtatggttaagtccttcg |
13017411 |
T |
 |
| Q |
122 |
aatcctctgaagttctattatggtaatttgcactcctattt-taagcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctctt |
220 |
Q |
| |
|
||||||| ||| ||| |||||||||||||||||||| | | | |||||||||| ||||| ||||| ||||||| ||||||| ||||||||||||| |
|
|
| T |
13017412 |
aatcctccaaagctctcctatggtaatttgcactcctaaatatgatcaatgattatttagtttcacgacggattaacttagtaattctacccaatctctt |
13017511 |
T |
 |
| Q |
221 |
gacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacct |
320 |
Q |
| |
|
||||||||||||| |||| || | |||| || |||||||||||| |||||||||||||||||||||| ||||| | ||||||||||||||||||||||| |
|
|
| T |
13017512 |
gacctagaattctccccgcaagtgacaaccccttaatctcttaagtgaattcgaaaccattggaggtattaac-gaacgttaatccctatatcataacct |
13017610 |
T |
 |
| Q |
321 |
aataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcc |
420 |
Q |
| |
|
|||||| |||||||||| ||| |||||||||||||||| | ||||| || |||||||| |||| | ||||||||||| |||| ||||| ||||| |
|
|
| T |
13017611 |
aataatgatctatctctaacttgattacttaggttaaacctattacctaattcagagttaagagccagggttagtggtcattcaatttctatgatcaata |
13017710 |
T |
 |
| Q |
421 |
tgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactagacttttattgat-atga |
519 |
Q |
| |
|
|||| | | || | |||||| | ||||| || |||||| || || ||||| || || |||||||||||||||||| ||||| ||| || | | |
|
|
| T |
13017711 |
tgcatattcataacgctagggttaatagtctatcataaacgtacataaggcattaagcacaaagtaatatgaataaaaactaaactttcatttatgttca |
13017810 |
T |
 |
| Q |
520 |
taggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
|||| ||||||||||||| ||||||||| |||||||||| |||||||| |
|
|
| T |
13017811 |
aaggagttcaacaaattagggttcccataggattacatcagattcatct |
13017859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 106 - 418
Target Start/End: Original strand, 12983586 - 12983897
Alignment:
| Q |
106 |
atggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaat |
205 |
Q |
| |
|
||||| ||||| ||||||||||| |||||||| |||| ||| || || |||||| || ||||| | ||||||| |||||||||||||||||||||| |
|
|
| T |
12983586 |
atggtcaagaccttcgaatcctccgaagttctcctatgaaaatctgtacccctattc-aatcaatgttcgtctagtttaacgacagattaacaaagtaat |
12983684 |
T |
 |
| Q |
206 |
tttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatc |
305 |
Q |
| |
|
| |||||||||||||||||| ||||||| ||| || | |||| || |||||||||||| ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
12983685 |
tctacccaatctcttgaccttgaattctctccgcaagtgacaaccccttaatctcttaagtgaattcgaaaccgttggaggttttaacagtccgttaatc |
12983784 |
T |
 |
| Q |
306 |
cctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaa |
405 |
Q |
| |
|
| | | |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | ||||| ||||| | | | ||||||||| |||| |
|
|
| T |
12983785 |
catgtgtcataacctaataattttctatctctagcttaattacttaggttaaacatattacctagatcagagtcaaaagtcagggctagtggtcattcaa |
12983884 |
T |
 |
| Q |
406 |
gttctaagatcag |
418 |
Q |
| |
|
||||||||||||| |
|
|
| T |
12983885 |
gttctaagatcag |
12983897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 106 - 418
Target Start/End: Original strand, 12980699 - 12981010
Alignment:
| Q |
106 |
atggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaat |
205 |
Q |
| |
|
||||| ||||| ||||||||||| |||||||| |||| |||||| || |||||| || ||||| | ||||||| |||||||||||||||||||||| |
|
|
| T |
12980699 |
atggtcaagaccttcgaatcctccgaagttctcctatgaaaatttgtacccctattc-aatcaatgttcgtctagtttaacgacagattaacaaagtaat |
12980797 |
T |
 |
| Q |
206 |
tttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatc |
305 |
Q |
| |
|
| |||||||||||||||||||||||||| ||| || | |||| | |||||||||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
12980798 |
tctacccaatctcttgacctagaattctctccgcaagtgacaaccgcttaatctcttaagtgaattcgaaattgttggaggttttaacagtccgttaatc |
12980897 |
T |
 |
| Q |
306 |
cctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaa |
405 |
Q |
| |
|
| | ||||||||||||| || ||||||||||||||||||||||||||||||||| |||||| | ||||| ||||| | | | ||||||||| |||| |
|
|
| T |
12980898 |
catgagtcataacctaatacttttctatctctagcttaattacttaggttaaacatattacctagatcagagtcaaaagtcagggctagtggtcattcaa |
12980997 |
T |
 |
| Q |
406 |
gttctaagatcag |
418 |
Q |
| |
|
||||||||||||| |
|
|
| T |
12980998 |
gttctaagatcag |
12981010 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 63 - 568
Target Start/End: Complemental strand, 22221807 - 22221300
Alignment:
| Q |
63 |
attaaaaacaataaaatataggttttttgaaaattaa-agaggtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctatt |
161 |
Q |
| |
|
||||||||||||||| || ||||||| ||||||| | ||| | ||||||||| | ||||||||||| |||| ||| ||||||||||||||||| || |
|
|
| T |
22221807 |
attaaaaacaataaagaattggtttttagaaaattgagagaagcatggttaagtccttcgaatcctccgaagctctcctatggtaatttgcactcttaaa |
22221708 |
T |
 |
| Q |
162 |
tt-aagcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctc |
260 |
Q |
| |
|
| || |||||||||| |||| ||||| ||||||| ||||||| |||||||||||||||||||||||||| |||| || | |||| || |||||||| |
|
|
| T |
22221707 |
tacaatcaatgattatttagtatcacgacggattaacttagtaattctacccaatctcttgacctagaattctccccgcaagtgacaaccccttaatctc |
22221608 |
T |
 |
| Q |
261 |
ttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaaca |
360 |
Q |
| |
|
| || |||||||||||||||| |||| |||| ||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
22221607 |
tcaagtgaattcgaaaccattagaggaattaaacaaacgttaatccatatatcataacctaataatgatctatctctagcttgattacttaggttaaacc |
22221508 |
T |
 |
| Q |
361 |
ttccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaac |
460 |
Q |
| |
|
| |||| |||||| ||||||||| | ||||||||||| |||| ||||| ||||| |||| | | || |||||||| | ||||| || |||||| |
|
|
| T |
22221507 |
tattaccttttttagatttaaaagccagggttagtggtcattcaatttctatgatcaatatgcatattcataaagctagggttaatagtctatcataaac |
22221408 |
T |
 |
| Q |
461 |
ataagaaaattattaaacataagataatatgaataaaaactagacttttattgat-atgataggaattcaacaaattagagttcccataagattacatca |
559 |
Q |
| |
|
||| || |||||||| ||| |||||||||||||||||| ||||| |||||| | | | || ||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
22221407 |
atacataaggcattaaacacaaggtaatatgaataaaaactaaactttcattgatgttcaaaagagttcaacaaattagggtt-ccataggattacatca |
22221309 |
T |
 |
| Q |
560 |
tattcatct |
568 |
Q |
| |
|
|||||||| |
|
|
| T |
22221308 |
gattcatct |
22221300 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 15535200 - 15534923
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaaa |
100 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| ||||||| ||| |||||| | ||| |||||||||||||||||| | |||||| ||||||||| |
|
|
| T |
15535200 |
aaaggatgtattaaattcaaggttgccctaggcagttgagttgatt-ttgtaaaacaaatagattaaaaacaataaaagtttggttttac-aaaattaaa |
15535103 |
T |
 |
| Q |
101 |
gag--gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaaca |
198 |
Q |
| |
|
| | ||||||||||||| ||| ||||||| |||||| | |||||||||||||| ||||| || || |||||||||||||||| ||||||||||||||| |
|
|
| T |
15535102 |
gtgatgtatggttaagaccttcaaatcctccgaagttttcctatggtaatttgcattcctaattcaatcaatgattatctagttcaacgacagattaaca |
15535003 |
T |
 |
| Q |
199 |
aagtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaacc |
278 |
Q |
| |
|
|||||| | || |||||||||||||||||| |||| |||| || |||||| | |||||||||||| ||||||||||||| |
|
|
| T |
15535002 |
aagtaactctaaccaatctcttgacctagagttctccccgcaagtaacaacctcttaatctcttaagtgaattcgaaacc |
15534923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 63 - 568
Target Start/End: Complemental strand, 22247642 - 22247135
Alignment:
| Q |
63 |
attaaaaacaataaaatataggttttttgaaaattaa-agaggtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctatt |
161 |
Q |
| |
|
||||||||||||||| || ||||||| ||||||| | ||| | ||||||||| | ||||||||||| |||| ||| ||||||||||||||||| || |
|
|
| T |
22247642 |
attaaaaacaataaagaattggtttttagaaaattgagagaagcatggttaagtccttcgaatcctccgaagctctcctatggtaatttgcactcttaaa |
22247543 |
T |
 |
| Q |
162 |
tt-aagcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctc |
260 |
Q |
| |
|
| || |||||||||| |||| ||||| ||||||| ||||||| |||||||||||||||||||||||||| |||| || | |||| || |||||||| |
|
|
| T |
22247542 |
tacaatcaatgattatttagtatcacgacggattaacttagtaattctacccaatctcttgacctagaattctccccgcaagtgacaaccccttaatctc |
22247443 |
T |
 |
| Q |
261 |
ttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaaca |
360 |
Q |
| |
|
| || |||||||||||||||| |||| |||| ||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
22247442 |
tcaagtgaattcgaaaccattagaggaattaaacaaacgttaatccatatatcataacctaataatgatctatctctagcttgattacttaggttaaacc |
22247343 |
T |
 |
| Q |
361 |
ttccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaac |
460 |
Q |
| |
|
| |||| ||| ||||||||||||| | ||||||||||| |||| ||||| ||||| |||| | | || |||||| | | ||||| || |||||| |
|
|
| T |
22247342 |
tattacctggttcagagttaaaagccagggttagtggtcattcaatttctatgatcaatatgcatattcataaagctatggttaatagtctatcataaac |
22247243 |
T |
 |
| Q |
461 |
ataagaaaattattaaacataagataatatgaataaaaactagacttttattgat-atgataggaattcaacaaattagagttcccataagattacatca |
559 |
Q |
| |
|
||| || |||||||| ||| |||||||||||||||| | ||||| |||||| | | | || ||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
22247242 |
atacataaggcattaaacacaaggtaatatgaataaaaaccaaactttcattgatgttcaaaagagttcaacaaattagggtt-ccataggattacatca |
22247144 |
T |
 |
| Q |
560 |
tattcatct |
568 |
Q |
| |
|
|||||||| |
|
|
| T |
22247143 |
gattcatct |
22247135 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 105 - 361
Target Start/End: Original strand, 7769594 - 7769857
Alignment:
| Q |
105 |
tatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaa |
204 |
Q |
| |
|
|||||||||||| ||||||||||| || | ||| ||||||||||||||| | | || || ||||| | || ||||| ||||||| ||||||||||||| |
|
|
| T |
7769594 |
tatggttaagaccttcgaatcctccgatgctcttatatggtaatttgcaccctcaattcaatcaatgttcatttagtttaacgacatattaacaaagtaa |
7769693 |
T |
 |
| Q |
205 |
ttttacccaatctcttgacctag----aattcttcccggaaataacaatccattaatctcttaa---atgaattcgaaaccattggaggttttaacagtc |
297 |
Q |
| |
|
|| ||| |||||| ||||||||| |||||| | | || | || || |||||||||| | |||||||||||| | |||||||||||||||||| |
|
|
| T |
7769694 |
ttctactcaatcttttgacctagctataattctctctgcaagtgctaaccccttaatctcttcagtgatgaattcgaaatctttggaggttttaacagtc |
7769793 |
T |
 |
| Q |
298 |
cgttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacat |
361 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
7769794 |
cgttaatccctaaatcataacctaataattgtctatctctaacttaattacttaggttaaacat |
7769857 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 208 - 326
Target Start/End: Complemental strand, 15538158 - 15538040
Alignment:
| Q |
208 |
tacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccc |
307 |
Q |
| |
|
||||||||||||||||||||| |||| |||| || |||||| | |||||||||||| |||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
15538158 |
tacccaatctcttgacctagagttctccccgcaagtaacaacaccttaatctcttaagtgaattcgaaaccattggaggttttaacagaacgttaatccc |
15538059 |
T |
 |
| Q |
308 |
tatatcataacctaataat |
326 |
Q |
| |
|
||| ||||||| ||||||| |
|
|
| T |
15538058 |
tatgtcataacttaataat |
15538040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 24 - 238
Target Start/End: Original strand, 30978335 - 30978551
Alignment:
| Q |
24 |
tgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggtttttt-gaaaattaa-agaggtatggttaagacattcg |
121 |
Q |
| |
|
||||||||||| ||||||| ||| | ||||||||||| |||||||||||||||| || ||||||| ||||||| | ||| ||||||||||| | |||| |
|
|
| T |
30978335 |
tgccctaggcagttgagttgatt-tagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattgagagaagtatggttaagtccttcg |
30978433 |
T |
 |
| Q |
122 |
aatcctctgaagttctattatggtaatttgcactcct-attttaagcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctctt |
220 |
Q |
| |
|
||||||| ||| ||| ||||||||||||||||||| | | | |||||||||| ||||| ||||| ||||||| ||||||| ||||||||||||| |
|
|
| T |
30978434 |
aatcctccaaagctctcctatggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacggattaacttagtaattctacccaatctctt |
30978533 |
T |
 |
| Q |
221 |
gacctagaattcttcccg |
238 |
Q |
| |
|
||||||||||||| |||| |
|
|
| T |
30978534 |
gacctagaattctccccg |
30978551 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 253 - 568
Target Start/End: Complemental strand, 32427258 - 32426944
Alignment:
| Q |
253 |
ttaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacctaataattgtctatctctagcttaattacttag |
352 |
Q |
| |
|
|||||||||||| ||||||| ||||| |||||||| ||||||| |||||||||||| ||||||| ||||||| ||||||||||| || ||||||||| |
|
|
| T |
32427258 |
ttaatctcttaagtgaattcaaaaccgttggaggtattaacagaatgttaatccctatgtcataacataataatgatctatctctagattgattacttag |
32427159 |
T |
 |
| Q |
353 |
gttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaa |
452 |
Q |
| |
|
||||||| | |||||| | ||| |||| || | ||||||||||| |||| ||||||||| |||| ||| | |||| ||| | || ||| | |
|
|
| T |
32427158 |
gttaaacttattacctagat--cagtcaaaatccagagttagtggtcattcaatctctaagatcgatttgcatactcctaaagccagggttagtggtcga |
32427061 |
T |
 |
| Q |
453 |
taataaacataagaaaattattaaacataagataatatgaataaaaactagacttttattgata-tgataggaattcaacaaattagagttcccataaga |
551 |
Q |
| |
|
| ||||||||| |||| ||||||||||| |||||| ||| ||||||||||||| ||||||| | | |||| ||||||||| ||| |||| |||| || |
|
|
| T |
32427060 |
tgataaacatacaaaaagcattaaacataaagtaatataaattaaaactagactttcattgatattcaaaggagttcaacaaactagggttctcatagga |
32426961 |
T |
 |
| Q |
552 |
ttacatcatattcatct |
568 |
Q |
| |
|
||| ||||||||||||| |
|
|
| T |
32426960 |
ttatatcatattcatct |
32426944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 586 - 658
Target Start/End: Original strand, 20189867 - 20189939
Alignment:
| Q |
586 |
gaaattagctagacatagaaatataaataaatagcatggaaaataaaattaaccatgaaaccatgttgttcct |
658 |
Q |
| |
|
||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20189867 |
gaaattagctagacatagagatacacataaatagcatggaaaataaaattaaccatgaaaccatgttgttcct |
20189939 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 586 - 658
Target Start/End: Complemental strand, 22146124 - 22146052
Alignment:
| Q |
586 |
gaaattagctagacatagaaatataaataaatagcatggaaaataaaattaaccatgaaaccatgttgttcct |
658 |
Q |
| |
|
||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22146124 |
gaaattagctagacatagagatacacataaatagcatggaaaataaaattaaccatgaaaccatgttgttcct |
22146052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 586 - 667
Target Start/End: Complemental strand, 16731057 - 16730976
Alignment:
| Q |
586 |
gaaattagctagacatagaaatataaataaatagcatggaaaataaaattaaccatgaaaccatgttgttcctcatttctct |
667 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
16731057 |
gaaattagctagacatagagatacaaataaatagcatgaaaactaaaattaaccatgaaaacatgttgttcctcaattctct |
16730976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 15540714 - 15540578
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaa-tataggttttttgaaaattaa |
99 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||| ||||||| ||| || ||| ||||| ||||||||||||||||| | ||| |||| ||||||||| |
|
|
| T |
15540714 |
aaaggatgtattaaattcaaggtttccctaggcagttgagttgatt-ttctaaaataaagggattaaaaacaataaaagtttag--ttttagaaaattaa |
15540618 |
T |
 |
| Q |
100 |
agag--gtatggttaagacattcgaatcctctgaagttct |
137 |
Q |
| |
|
|||| |||||||||||| ||||||||||| |||||||| |
|
|
| T |
15540617 |
agagatttatggttaagaccttcgaatcctccgaagttct |
15540578 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 485 - 580
Target Start/End: Complemental strand, 15534748 - 15534652
Alignment:
| Q |
485 |
taatatgaataaaaactagacttttattgatatg-ataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaacca |
580 |
Q |
| |
|
|||||||||||||||||||||||| ||||| || | |||| ||||||||||||| ||||||||| |||||||||| |||||||| | ||||||||| |
|
|
| T |
15534748 |
taatatgaataaaaactagactttcattgacattcaaaggagttcaacaaattagggttcccataggattacatcagattcatctcaatctcaacca |
15534652 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 580
Target Start/End: Complemental strand, 15537940 - 15537847
Alignment:
| Q |
488 |
tatgaataaaaactagacttttattgatatg-ataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaacca |
580 |
Q |
| |
|
|||||||||||| |||||||| ||||| || | |||| ||||||||||||| ||||||||| |||||||||| |||||||| ||||||||||| |
|
|
| T |
15537940 |
tatgaataaaaattagactttcattgacattcaaaggagttcaacaaattagggttcccatatgattacatcaaattcatctcagtctcaacca |
15537847 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 204
Target Start/End: Complemental strand, 15540579 - 15540529
Alignment:
| Q |
154 |
ctcctattttaagcaatgattatctagttaaacgacagattaacaaagtaa |
204 |
Q |
| |
|
|||||| ||||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
15540579 |
ctcctaatttaatcaatgattatctagttcaacgacagattaacaaagtaa |
15540529 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 27649143 - 27649077
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaat |
170 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||| |||||||||||||||| ||| || ||||||| |
|
|
| T |
27649143 |
gtatggttaagaccttcgaatcctccgaagttctcctatggtaatttgcacttctaattcaagcaat |
27649077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 168
Target Start/End: Complemental strand, 32427441 - 32427278
Alignment:
| Q |
5 |
gatgtattaaattcaatgttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaaagag- |
103 |
Q |
| |
|
|||||||||||||||| |||||||||| || ||| || | |||||| |||||| |||||||||||| ||| | |||||| |||||||| |||| |
|
|
| T |
32427441 |
gatgtattaaattcaaggttgccctag-cagttggattggtatttgtaaaataaacgaattaaaaacaatgaaagtttggtttta-gaaaattagagaga |
32427344 |
T |
 |
| Q |
104 |
-gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagca |
168 |
Q |
| |
|
|| || ||||||| || ||||||||||||||||| |||||||||||||||||||| || ||||| |
|
|
| T |
32427343 |
tgtttgattaagacctttgaatcctctgaagttctcctatggtaatttgcactcctaattcaagca |
32427278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 11183937 - 11184014
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaa |
78 |
Q |
| |
|
|||||||||||||||||||| | ||||||||| ||||||| ||| ||||||||||||| | |||||||||||||| |
|
|
| T |
11183937 |
aaaggatgtattaaattcaagagttccctaggcagttgagttgatttttgtaacataaacgtaataaaaacaataaaa |
11184014 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 28118094 - 28118053
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtt |
42 |
Q |
| |
|
||||||| |||||||||||||| ||||||||||| ||||||| |
|
|
| T |
28118094 |
aaaggatatattaaattcaatggtgccctaggcagttgagtt |
28118053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 201; Significance: 1e-109; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 580
Target Start/End: Original strand, 12575400 - 12575981
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaaa |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| ||||||| ||| |||||||||||| ||||||||||||||||| || |||||| |||||||| | |
|
|
| T |
12575400 |
aaaggatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacataaattgattaaaaacaataaaagattggtttta-gaaaattaga |
12575498 |
T |
 |
| Q |
101 |
gag--gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaaca |
198 |
Q |
| |
|
||| ||||||||||||| | |||||||| |||||| | ||||||||||||||||||||| || |||||||||| |||||||| ||||||||||||||| |
|
|
| T |
12575499 |
gagaagtatggttaagaccattgaatcctccgaagttttcttatggtaatttgcactcctaattcaagcaatgataatctagtttaacgacagattaaca |
12575598 |
T |
 |
| Q |
199 |
aagtaattttacccaatctctt-gacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtc |
297 |
Q |
| |
|
|||||||| |||| |||||||| |||||||||||| |||| || |||||| || |||||||||||| |||||| |||||||||||||||||||||| | |
|
|
| T |
12575599 |
aagtaattctacctaatctcttaaacctagaattctccccgcaagtaacaa-cccttaatctcttaagtgaattagaaaccattggaggttttaacaata |
12575697 |
T |
 |
| Q |
298 |
cgttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtgg |
397 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||||||||| ||| |||||||| ||||||| | |||| | | | ||| ||||||| |||||| | |
|
|
| T |
12575698 |
cgttaatccttatatcataacctaataatgatctatctctaacttgattacttatgttaaacctattaccttgatcaaagtcaaaagccaaggttagtag |
12575797 |
T |
 |
| Q |
398 |
tcaatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaa |
497 |
Q |
| |
|
||| |||| |||||||||| |||| | | || ||| |||| || || || || ||||| ||| |||| || |||| || ||||||||||||| |
|
|
| T |
12575798 |
tcattcaatctctaagatcaatttgcatattcataaagttagggctagttgttgatgataaagatacaaaaagcgttgaacacaaagtaatatgaataaa |
12575897 |
T |
 |
| Q |
498 |
aactagacttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaacca |
580 |
Q |
| |
|
||||||||||| ||||||| | | |||| ||||||||||||| ||||| ||| |||||||||| |||||||||||||||||||| |
|
|
| T |
12575898 |
aactagactttcattgatattcaaaggagttcaacaaattagggttcctataggattacatcagattcatctaagtctcaacca |
12575981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 86 - 580
Target Start/End: Complemental strand, 13097081 - 13096594
Alignment:
| Q |
86 |
tttttgaaaattaaagag--gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagtta |
183 |
Q |
| |
|
|||| |||||||| |||| ||||||||||||| ||||||||||| |||||| | |||| ||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
13097081 |
ttttagaaaattagagagaagtatggttaagaccttcgaatcctccgaagttatcctatg-taatttgcactcctaatttaagcaatgattatctagttc |
13096983 |
T |
 |
| Q |
184 |
aacgacagattaacaaagtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattgg |
283 |
Q |
| |
|
|| || ||||||||||||||||| |||||||||||||| ||||||||||| |||| || | |||| || ||||| |||||| |||||| |||||| | || |
|
|
| T |
13096982 |
aatgaaagattaacaaagtaattctacccaatctcttggcctagaattctccccgcaagtgacaaccccttaatgtcttaagtgaatttgaaaccgtggg |
13096883 |
T |
 |
| Q |
284 |
aggttttaacagtccgttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaa |
383 |
Q |
| |
|
|||||||||||| ||| ||||||||| |||||| |||||||| |||||||||||||| ||||||||| |||||| | |||||| | |||||||||| |
|
|
| T |
13096882 |
aggttttaacagaacgtaaatccctatgtcataatctaataatgatctatctctagcttgattacttagcttaaacttattacctaggtcagagttaaaa |
13096783 |
T |
 |
| Q |
384 |
g--ccggtgttagtggtcaatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacata |
481 |
Q |
| |
|
| | || ||||||| ||| |||| |||||||||| |||| | | || |||||||| | |||||| || |||||||| | |||| ||||||| |
|
|
| T |
13096782 |
ggccaggagttagtgatcattcaatctctaagatcaatttgcatattcataaagctagggatagtagtcgatgataaacat-acaaaagcattaaac--- |
13096687 |
T |
 |
| Q |
482 |
agataatatgaataaaaactagacttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaacca |
580 |
Q |
| |
|
|| ||| ||||||||||||| ||||||| | | |||| ||||| |||| || ||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
13096686 |
-------atcaattaaaactagactttcattgatattcaaaggagttcaataaatcagggttcccataggattacatcaggttcatctaagtctcaacca |
13096594 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 5 - 359
Target Start/End: Original strand, 41778847 - 41779194
Alignment:
| Q |
5 |
gatgtattaaattcaatgttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaaagag- |
103 |
Q |
| |
|
|||||||||||||||| | ||||||||||| |||| || ||| ||||||||||||| |||||||||||||||| || | ||| ||| ||||||||| |
|
|
| T |
41778847 |
gatgtattaaattcaagggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattgattta--gaagattaaagaga |
41778944 |
T |
 |
| Q |
104 |
-gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagt |
202 |
Q |
| |
|
||||||||||||| ||| |||| || |||||||| |||| ||||||||||| || || || |||||||||||||| | |||||||||||||| | | |
|
|
| T |
41778945 |
agtatggttaagaccttcaaatcttccgaagttctcctatgctaatttgcactagtaattcaaacaatgattatctaggttcacgacagattaacacaat |
41779044 |
T |
 |
| Q |
203 |
aattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgtta |
302 |
Q |
| |
|
|| | |||||||||||||||||||||||||| |||| || | ||| || ||||| |||||| ||||||| |||||| | ||| | | || | |
|
|
| T |
41779045 |
aactctacccaatctcttgacctagaattctccccgcaagtggcaaccccttaatatcttaagtgaattcaaaacca--aaatgtt-----attatgtca |
41779137 |
T |
 |
| Q |
303 |
atccctatatcataacctaataattgtctatctctagcttaattacttaggttaaac |
359 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
41779138 |
atccctatgtcataacctaataatgatctatctctagcttgattacttaggttaaac |
41779194 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 14418609 - 14418451
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatg-ttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaa |
99 |
Q |
| |
|
||||||| | |||||||||||| |||||||||||| ||||||| || || |||||||||| |||||||||||||||| | |||||| ||| |||| |
|
|
| T |
14418609 |
aaaggatatgttaaattcaatggttgccctaggcagttgagttggttttt--aacataaacaaattaaaaacaataaaagtt-ggttttaagaatattag |
14418513 |
T |
 |
| Q |
100 |
agag--gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactccta |
159 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||| |||| |||| ||||||||||||||| |
|
|
| T |
14418512 |
agagaagtatggttaagacattcgaatcctccgaatttctcctatgataatttgcactccta |
14418451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 105 - 359
Target Start/End: Complemental strand, 44008335 - 44008087
Alignment:
| Q |
105 |
tatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaa |
204 |
Q |
| |
|
|||||||| ||| ||||||||||| |||| || | ||||||| |||||||||| || || |||||||||| ||||| |||| |||||| |||| |
|
|
| T |
44008335 |
tatggttatgaccttcgaatcctccgaagctcgcctttggtaatctgcactcctagttcaaacaatgattatttagtttcacgatagatta-----gtaa |
44008241 |
T |
 |
| Q |
205 |
ttttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaat |
304 |
Q |
| |
|
| |||| |||| || ||||||||||||| |||| || | |||| | |||||||| ||| |||||| |||| | |||||||| |||| || ||||||| |
|
|
| T |
44008240 |
ctctaccaaatccctcgacctagaattct-cccgcaagtgacaactccttaatctcataagtgaatttgaaatcgttggaggtattaaaagaacgttaat |
44008142 |
T |
 |
| Q |
305 |
ccctatatcataacctaataattgtctatctctagcttaattacttaggttaaac |
359 |
Q |
| |
|
|||| | || |||||||| ||| ||||| |||||||| |||| ||||||||||| |
|
|
| T |
44008141 |
ccctgtgtcgtaacctaacaatgatctatttctagcttgattagttaggttaaac |
44008087 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 41836429 - 41836492
Alignment:
| Q |
106 |
atggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaa |
169 |
Q |
| |
|
||||||||||| ||||||||||| |||||||| ||||||||||||||||| || ||| ||||| |
|
|
| T |
41836429 |
atggttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcataattttagcaa |
41836492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 14418395 - 14418355
Alignment:
| Q |
298 |
cgttaatccctatatcataacctaataattgtctatctcta |
338 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
14418395 |
cgttaatccctatatcataatctaataatgatctatctcta |
14418355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 196; Significance: 1e-106; HSPs: 12)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 548
Target Start/End: Original strand, 23673445 - 23673994
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaaa |
100 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| ||| || |||||| |||||| ||||||||||||||||| | |||||| |||||||| | |
|
|
| T |
23673445 |
aaaggatgtattaaattcaaggttgccctaggcagttggattggcatttgtaaaataaacggattaaaaacaataaaagtttggtttta-gaaaattaga |
23673543 |
T |
 |
| Q |
101 |
gag--gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaaca |
198 |
Q |
| |
|
||| ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| || || |||||||||||||||| ||||||| ||||||| |
|
|
| T |
23673544 |
gagatgtatggttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcctaattcaatcaatgattatctagtttaacgacaaattaaca |
23673643 |
T |
 |
| Q |
199 |
aagtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtcc |
298 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |||| | | |||| || |||||||||||| |||||||||||| |||||||||||||||| | |
|
|
| T |
23673644 |
aagtaattctacccaatctcttgacctagaattctccccgcatgtgacaaccccttaatctcttaagtgaattcgaaacagttggaggttttaacagaac |
23673743 |
T |
 |
| Q |
299 |
gttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggt |
398 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| | |||||| | ||||| ||||| | | | ||||||| |
|
|
| T |
23673744 |
gttaatccctatgtcataacctaataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagtcagggatagtggt |
23673843 |
T |
 |
| Q |
399 |
caatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaa |
498 |
Q |
| |
|
|| |||| |||||||||| |||| | | || ||| |||| | |||||| || ||||||||| |||| ||||||||||| |||||||||| ||| |
|
|
| T |
23673844 |
cattcaatctctaagatcaatttgcatattcataaagttagggttagtagtcgatgataaacatacaaaaagcattaaacataaagtaatatgaattaaa |
23673943 |
T |
 |
| Q |
499 |
actagacttttattgata-tgataggaattcaacaaattagagttcccata |
548 |
Q |
| |
|
|||||||||| ||||||| | | |||| |||||||||||| ||||||||| |
|
|
| T |
23673944 |
actagactttcattgatattcaaaggagttcaacaaattaaggttcccata |
23673994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 24 - 494
Target Start/End: Complemental strand, 16295019 - 16294550
Alignment:
| Q |
24 |
tgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaa-agaggtatggttaagacattcga |
122 |
Q |
| |
|
||||||||||| ||||||| ||| ||||| ||||||| |||||||||||| ||| || ||||| ||||||| | ||| ||||||||||| | ||||| |
|
|
| T |
16295019 |
tgccctaggcagttgagttgatt-ttgtatcataaaccgattaaaaacaaataaagattagttttcagaaaattgagagaagtatggttaagtccttcga |
16294921 |
T |
 |
| Q |
123 |
atcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctcttga |
222 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||| ||||| |||||||||| ||||| ||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
16294920 |
atcctccgaagttctcctatggtaatttgcactcctagtttaatcaatgattatttagtttcacgacagattaacttagtaattctacccaatctcttga |
16294821 |
T |
 |
| Q |
223 |
cctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacctaa |
322 |
Q |
| |
|
||||||||||| |||| || | |||| || |||||||||||| ||||||||||||| |||||||| |||| || ||||||||||||| ||||||||||| |
|
|
| T |
16294820 |
cctagaattctccccgcaagtgacaaccccttaatctcttaagtgaattcgaaaccgttggaggtattaa-agaacgttaatccctatgtcataacctaa |
16294722 |
T |
 |
| Q |
323 |
taattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcctg |
422 |
Q |
| |
|
|||| |||||||||| ||| |||||||||||||||| | || ||||| ||||||||||||| | ||||||||||| |||| ||||| ||||| || |
|
|
| T |
16294721 |
taatgatctatctctaacttgattacttaggttaaacctattacatagttcagagttaaaagccagagttagtggtcattcaatttctatgatcaatatg |
16294622 |
T |
 |
| Q |
423 |
caaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaat |
494 |
Q |
| |
|
|| | | || |||||||| | |||||| || ||||||||| ||| |||||||| ||| |||||||||| |
|
|
| T |
16294621 |
catattcataaagctagggttagtagtcgatgataaacatacacaaagcattaaacacaaggtaatatgaat |
16294550 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 48 - 568
Target Start/End: Complemental strand, 13710169 - 13709647
Alignment:
| Q |
48 |
ttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaaagag--gtatggttaagacattcgaatcctctgaa-gttctattatgg |
144 |
Q |
| |
|
||||||||||||| ||||||||||||||||| || |||||| ||||||| |||| ||||||||||||| ||| |||| |||||| | ||| |||| |
|
|
| T |
13710169 |
ttgtaacataaacggattaaaaacaataaaagattggtttta-gaaaatttgagagaagtatggttaagaccttcaaatcatctgaaagctctcctatga |
13710071 |
T |
 |
| Q |
145 |
taatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctcttgacctagaattcttcccggaaata |
244 |
Q |
| |
|
||||||||||||||| |||| ||||||||||||||||| ||| ||||||||||||||||||| ||||| ||||||||||| | |||||| ||| || | |
|
|
| T |
13710070 |
taatttgcactcctaatttaggcaatgattatctagttcaacaacagattaacaaagtaattctacccgatctcttgacccataattctcccctcaagtg |
13709971 |
T |
 |
| Q |
245 |
acaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacctaataattgtctatctctagcttaa |
344 |
Q |
| |
|
|||| || ||||||||| | ||||||||||| | ||||||||||||||| ||||||||||||| ||||||||||||||| ||||| |||||||| | |
|
|
| T |
13709970 |
acaaccccataatctctttagtgaattcgaaatcgttggaggttttaacaaaacgttaatccctatgtcataacctaataatgatctatatctagcttga |
13709871 |
T |
 |
| Q |
345 |
ttacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcctgcaaacttatcaagctaggactt |
444 |
Q |
| |
|
|||||| |||||||| | ||||||| | ||||| |||| || | ||||||||||| |||| |||||||||| | || | | || |||||||| | |
|
|
| T |
13709870 |
ttacttgggttaaacttatcacctaggtcagagtcaaaatccagggttagtggtcattcaatctctaagatcaatttacatattcataaagctagggtta |
13709771 |
T |
 |
| Q |
445 |
gtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactagacttttattgatatgataggaattcaacaaattagagttcc |
544 |
Q |
| |
|
|||||| || ||||||||| |||| ||||||||||| |||||||||| |||| |||||||| |||||||| | | | ||||||||||||| |||| |
|
|
| T |
13709770 |
gtagtcgatgataaacatacaaaaagcattaaacataaagtaatatgaattaaaattagactttcattgatattcttgaagttcaacaaattagggttca |
13709671 |
T |
 |
| Q |
545 |
cataagattacatcatattcatct |
568 |
Q |
| |
|
|||| |||||||||| |||||||| |
|
|
| T |
13709670 |
cataggattacatcagattcatct |
13709647 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 5 - 568
Target Start/End: Complemental strand, 36327067 - 36326500
Alignment:
| Q |
5 |
gatgtattaaattcaatgttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaaagag- |
103 |
Q |
| |
|
|||||||||||||||| ||||||||||| | || || | |||||| |||||| ||||||||||||||||| | |||||| |||||||| |||| |
|
|
| T |
36327067 |
gatgtattaaattcaaagttgccctaggaagttagattggtatttgtaaaataaacggattaaaaacaataaaagtttggtttta-gaaaattagagaga |
36326969 |
T |
 |
| Q |
104 |
-gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagt |
202 |
Q |
| |
|
||||||||||||| || |||||||| |||||||| |||||||||||||||||||| || |||||||||||||||| || ||||| ||||||||||||| |
|
|
| T |
36326968 |
tgtatggttaagacctttgaatcctccgaagttctcatatggtaatttgcactcctaattcaagcaatgattatctaatttaacgatagattaacaaagt |
36326869 |
T |
 |
| Q |
203 |
aattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattc----gaaaccattggaggttttaacagtcc |
298 |
Q |
| |
|
|||| |||||||||||||||||||||||||| || | || | |||| | |||||||||||| |||||| ||||| |||||||| ||||||| | |
|
|
| T |
36326868 |
aattctacccaatctcttgacctagaattctccctgcaagtgacaactccttaatctcttaagtgaattaatttgaaactgttggaggtattaacagaac |
36326769 |
T |
 |
| Q |
299 |
gttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggt |
398 |
Q |
| |
|
|||||||||| | ||||| ||||||||| |||||||||||||| |||||||||||||||| | |||||| | | ||| ||||||| | ||||||||| |
|
|
| T |
36326768 |
gttaatccctgtgtcatagcctaataatgatctatctctagcttgattacttaggttaaacttattacctagatcaaagtcaaaagccagggttagtggt |
36326669 |
T |
 |
| Q |
399 |
caatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaa |
498 |
Q |
| |
|
|| |||| ||||||||| |||| | | || |||||||| | |||||| || ||||||| | |||| ||||||||||| |||||||||| ||| |
|
|
| T |
36326668 |
cattcaatctctaagatcgatttgcatattcataaagctagggttagtagtcgatgataaacaca--aaaagcattaaacataaagtaatatgaattaaa |
36326571 |
T |
 |
| Q |
499 |
actagacttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
|||||||||| ||||||| | | | || ||||||||| ||| ||||||||| |||||||||| |||||||| |
|
|
| T |
36326570 |
actagactttcattgatattcaaatgagttcaacaaactagggttcccataggattacatcagattcatct |
36326500 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 24 - 568
Target Start/End: Complemental strand, 31528511 - 31527965
Alignment:
| Q |
24 |
tgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggtttttt-gaaaattaa-agaggtatggttaagacattcg |
121 |
Q |
| |
|
||||||||||| ||||||| ||| | ||||||||||| |||||||||||||||| || ||||||| ||||||| | ||| ||||||||||| | |||| |
|
|
| T |
31528511 |
tgccctaggcagttgagttgatt-tagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattgagagaagtatggttaagtccttcg |
31528413 |
T |
 |
| Q |
122 |
aatcctctgaagttctattatggtaatttgcactcctatttta-agcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctctt |
220 |
Q |
| |
|
|||||||| ||| ||| | |||||||||||||||||| | | |||||||||| ||||| ||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
31528412 |
aatcctctaaagctctcctgtggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacagattaacttagtaattctacccaatctctt |
31528313 |
T |
 |
| Q |
221 |
gacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacct |
320 |
Q |
| |
|
||||||||||||| |||| || | |||| || |||||||||||| |||||||||||||| ||||||| ||||| | ||||||||||||||||||||||| |
|
|
| T |
31528312 |
gacctagaattctccccgcaagtgacaaccccttaatctcttaagtgaattcgaaaccaatggaggtattaac-gaacgttaatccctatatcataacct |
31528214 |
T |
 |
| Q |
321 |
aataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcc |
420 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||| | ||||| || ||||||||||||| | ||||||||||| |||| ||||| ||||| |
|
|
| T |
31528213 |
aataatgatctatctctagcttgattacttaggttaaacctattacctaattcagagttaaaagccagggttagtggtcattcaatttctatgatcaata |
31528114 |
T |
 |
| Q |
421 |
tgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactagacttttattgat-atga |
519 |
Q |
| |
|
|||| | | || | |||||| | ||||| || |||||| || || ||||| || || ||||| |||||||||||| ||||| |||||| | | |
|
|
| T |
31528113 |
tgcatattcataacgctagggttaatagtctatcataaacgtacataaggcattaagcacaaagtaataagaataaaaactaaactttcattgatgttca |
31528014 |
T |
 |
| Q |
520 |
taggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
|||| ||||||||||||| ||||||||| |||||||||| |||||||| |
|
|
| T |
31528013 |
aaggagttcaacaaattagggttcccataggattacatcagattcatct |
31527965 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 106 - 411
Target Start/End: Complemental strand, 31626588 - 31626283
Alignment:
| Q |
106 |
atggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaat |
205 |
Q |
| |
|
||||||||| ||||||||||||| |||| ||| |||||||||||||||||||| || || |||| ||||| ||||| ||||||||||||| |||||| |
|
|
| T |
31626588 |
atggttaagtcattcgaatcctccgaagctctcctatggtaatttgcactcctaattcaatcaattattatttagtttcacgacagattaacttagtaat |
31626489 |
T |
 |
| Q |
206 |
tttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatc |
305 |
Q |
| |
|
| |||||||||||||||||||||||||| || | || | |||| || |||||||||||| ||||||||||| | |||||||| |||| || |||||||| |
|
|
| T |
31626488 |
tctacccaatctcttgacctagaattctccctgcaagtgacaaccccttaatctcttaagtgaattcgaaatcgttggaggtattaaaagaacgttaatc |
31626389 |
T |
 |
| Q |
306 |
cctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaa |
405 |
Q |
| |
|
| ||| | ||||||||||||| |||||||||||||| |||||||||||||||| | |||||||| ||||||||||||| | ||||||||||| |||| |
|
|
| T |
31626388 |
cttatgttataacctaataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagccagggttagtggtcattcaa |
31626289 |
T |
 |
| Q |
406 |
gttcta |
411 |
Q |
| |
|
||||| |
|
|
| T |
31626288 |
tttcta |
31626283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 24 - 568
Target Start/End: Complemental strand, 40018099 - 40017553
Alignment:
| Q |
24 |
tgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaa-agaggtatggttaagacattcga |
122 |
Q |
| |
|
||||||||||| ||||||| ||| |||||||||||| ||||||||||||||| | | ||||| |||||| | ||| ||||||||||||| ||||| |
|
|
| T |
40018099 |
tgccctaggcagttgagttgatt--tgtaacataaacggattaaaaacaataagagactggtttaagaaaaattgagagaagtatggttaagaccttcga |
40018002 |
T |
 |
| Q |
123 |
atcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatcta---gttaaacgacagattaacaaagtaattttacccaatctct |
219 |
Q |
| |
|
|||||| ||| ||| |||||||||||||||||||| || || |||||||||| || ||| ||||||||||||| |||| || | ||||||| | |
|
|
| T |
40018001 |
atcctccgaaactctcctatggtaatttgcactcctaattcaaccaatgattatttataagttttacgacagattaactcagtacttctccccaatcctt |
40017902 |
T |
 |
| Q |
220 |
tgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacc |
319 |
Q |
| |
|
|||||||||||||| |||| || | |||| || ||| |||||||| |||||||||||| |||||||| |||| || ||||||| | ||| |||| ||| |
|
|
| T |
40017901 |
tgacctagaattctccccgcaagtgacaaccc-ttattctcttaagtgaattcgaaactgttggaggtattaaaagaacgttaattcatatgtcatgacc |
40017803 |
T |
 |
| Q |
320 |
taataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagc |
419 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||||| | |||||||| | ||| ||||||| | || |||||||| |||| |||| ||||| |
|
|
| T |
40017802 |
taataatgatctatctctagcttgattacttaggttaaacttattacctagttcaaagtcaaaagccagggtcagtggtcattcaatctctacgatcaat |
40017703 |
T |
 |
| Q |
420 |
ctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactagacttttattgata-tg |
518 |
Q |
| |
|
|||| | | || ||| |||| |||||| || ||||||||| |||| |||||||| ||| ||||||||||||| |||| ||||| ||||| | | |
|
|
| T |
40017702 |
ttgcatattcataaagatagggtcagtagtcgatgataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaactttcattgaaattc |
40017603 |
T |
 |
| Q |
519 |
ataggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
| |||| ||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
40017602 |
aaaggagttcaacaaattagggttcccataggattacatcatattcatct |
40017553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 98 - 580
Target Start/End: Original strand, 32575885 - 32576367
Alignment:
| Q |
98 |
aaagaggtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaac |
197 |
Q |
| |
|
||||| ||||||||||||| ||||||||||| |||| ||| |||| ||||||||||||||| || || ||||||||| ||||| ||||||||||||| |
|
|
| T |
32575885 |
aaagaagtatggttaagaccttcgaatcctccgaagctctcctatgataatttgcactcctagttcaaaaaatgattatttagtttcacgacagattaac |
32575984 |
T |
 |
| Q |
198 |
aaagtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtc |
297 |
Q |
| |
|
||||| | |||| |||| |||||||||||||||| ||| || | |||| || |||||||||| | ||||||||||| |||||||| |||| || |
|
|
| T |
32575985 |
ttagtaactctaccaaatcccttgacctagaattctccccacaagtgacaaccccttaatctcttgactgaattcgaaattgttggaggtattaaaagaa |
32576084 |
T |
 |
| Q |
298 |
cgttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtgg |
397 |
Q |
| |
|
||||||||||||| || ||||||||||| ||||||| |||||| |||| ||||||||||||| |||||||| | ||| ||||| | | || |||| |
|
|
| T |
32576085 |
cgttaatccctatgtcgtaacctaataaagatctatctttagcttgattatttaggttaaacatattacctagttcatagtcaaaagacagggtcagtga |
32576184 |
T |
 |
| Q |
398 |
tcaatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaa |
497 |
Q |
| |
|
||| |||| | || ||||| |||| | | || ||| ||||| ||||||||| |||||||| |||| ||| |||| || ||||||| ||||| |
|
|
| T |
32576185 |
tcattcaatctatacgatcaatttgcatattcataaagttaggatcagtagtcaatgataaacatgcaaaaagcatt-aacaaaaagtaatatggataaa |
32576283 |
T |
 |
| Q |
498 |
aactagacttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaacca |
580 |
Q |
| |
|
|||| ||||| ||||| | | | |||| ||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
32576284 |
gactaaactttcattgaaattcaaaggagttcaacaaattagggttcctataggattacatcatattcatctaagtctcaacca |
32576367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 288 - 361
Target Start/End: Complemental strand, 8426854 - 8426781
Alignment:
| Q |
288 |
tttaacagtccgttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacat |
361 |
Q |
| |
|
||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
8426854 |
tttaacaatccgttaatccctaaatcataacctaataattttctatctctagcttaattacttaggttaaacat |
8426781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 586 - 655
Target Start/End: Complemental strand, 11059479 - 11059410
Alignment:
| Q |
586 |
gaaattagctagacatagaaatataaataaatagcatggaaaataaaattaaccatgaaaccatgttgtt |
655 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
11059479 |
gaaattagctagacatagagatacaaataaatagcatgggaaataaaattaaccatgaaaccatgttgtt |
11059410 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 586 - 654
Target Start/End: Complemental strand, 13517987 - 13517919
Alignment:
| Q |
586 |
gaaattagctagacatagaaatataaataaatagcatggaaaataaaattaaccatgaaaccatgttgt |
654 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
13517987 |
gaaattagctagacatagagatacaaataaatagcatgggaaataaaattaaccatgaaaccatgttgt |
13517919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 8427260 - 8427141
Alignment:
| Q |
109 |
gttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaatttt |
208 |
Q |
| |
|
||||||||||||||||| || || ||||| | ||||||||||||| ||| || || ||||| | ||||||| ||| ||||||||| ||| | || | |
|
|
| T |
8427260 |
gttaagacattcgaatcatccgatgttcttatttggtaatttgcacccctgttc-aatcaatgtctttctagtttaacaacagattaataaaatggttct |
8427162 |
T |
 |
| Q |
209 |
acccaatctcttgacctagaa |
229 |
Q |
| |
|
|| |||||||||||||||||| |
|
|
| T |
8427161 |
actcaatctcttgacctagaa |
8427141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 194; Significance: 1e-105; HSPs: 17)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 104 - 568
Target Start/End: Complemental strand, 34405889 - 34405424
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagta |
203 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
34405889 |
gtatggttaagaccttcaaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacaaagta |
34405790 |
T |
 |
| Q |
204 |
attttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaa |
303 |
Q |
| |
|
||| |||||||||||||||||||||||||| | || | | |||| || |||||||||||| ||||||| ||||| ||||||||||||| || |||||| |
|
|
| T |
34405789 |
attctacccaatctcttgacctagaattctcctcgcatgtgacaaccccttaatctcttaagtgaattcaaaaccgttggaggttttaaaagaacgttaa |
34405690 |
T |
 |
| Q |
304 |
tccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatc |
403 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||| | |||||| | ||||| ||||||| | ||||||||||| | |
|
|
| T |
34405689 |
tccctatctcataacctaataatgatctatctctagcttgattacttaagttaaacttattacctagatcagagtcaaaagccagggttagtggtcattt |
34405590 |
T |
 |
| Q |
404 |
aagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactag |
503 |
Q |
| |
|
|| ||||||||||| |||| | | || |||||||| | ||||||||| ||||||||| |||| || |||||||| |||||||||| |||||||| |
|
|
| T |
34405589 |
aatctctaagatcagtttgcatattcataaagctagggttagtagtcaatgataaacatacaaaaagcataaaacataaagtaatatgaattaaaactag |
34405490 |
T |
 |
| Q |
504 |
acttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
||||| | ||||| | | |||| ||||||||||||| ||||||||| |||||||||| |||||||| |
|
|
| T |
34405489 |
actttcaatgatattcaaaggagttcaacaaattagggttcccataggattacatcagattcatct |
34405424 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 104 - 568
Target Start/End: Original strand, 14616633 - 14617098
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagta |
203 |
Q |
| |
|
||||||||||||| || |||||||| |||||||| ||||||||||| |||||||| || || |||||||||||||||| |||||||||||||||||||| |
|
|
| T |
14616633 |
gtatggttaagacctttgaatcctccgaagttctcctatggtaattttcactcctaattcaatcaatgattatctagtttaacgacagattaacaaagta |
14616732 |
T |
 |
| Q |
204 |
attttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaa |
303 |
Q |
| |
|
||| ||||||||||||||||||| |||||| |||| || | |||| || |||||||||| | ||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
14616733 |
attctacccaatctcttgacctataattctccccgcaagtgacaagcccttaatctcttgagtgaattcgaaaccgttggaggttttaacaaaacgttaa |
14616832 |
T |
 |
| Q |
304 |
tccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatc |
403 |
Q |
| |
|
||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||| | |||||| | ||||| ||||||| ||||||||||| || |
|
|
| T |
14616833 |
tccatatgtcataacctaataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccatggttagtggtcattc |
14616932 |
T |
 |
| Q |
404 |
aagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactag |
503 |
Q |
| |
|
|| |||||||||| |||| | | || ||| |||| | ||| || || ||||||||| |||| ||||||||||| |||||||||| |||||||| |
|
|
| T |
14616933 |
aatctctaagatcaatttgcatattcataaagttagggttagtattcgatgataaacatacaaaaagcattaaacataaagtaatatgaattaaaactag |
14617032 |
T |
 |
| Q |
504 |
acttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
||||| ||||||| | | |||| ||||||||| ||| |||| |||| ||||||||||||||||||| |
|
|
| T |
14617033 |
actttcattgatatttaaaggagttcaacaaactagggttctcataggattacatcatattcatct |
14617098 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 24 - 568
Target Start/End: Complemental strand, 33575210 - 33574664
Alignment:
| Q |
24 |
tgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaa-agaggtatggttaagacattcga |
122 |
Q |
| |
|
||||||||||| ||||||| ||| | ||||||||||| |||||||||||||||| || ||||||| ||||||| | ||| ||||||||||| | ||||| |
|
|
| T |
33575210 |
tgccctaggcagttgagttgatt-tagtaacataaactgattaaaaacaataaagaattggtttttagaaaattgagagaagtatggttaagtccttcga |
33575112 |
T |
 |
| Q |
123 |
atcctctgaagttctattatggtaatttgcactcctatttt-aagcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctcttg |
221 |
Q |
| |
|
|||||| |||| ||| |||||||||||||||||||| || || |||||||||| ||||| ||||| ||||||| ||||||| |||||||||||||| |
|
|
| T |
33575111 |
atcctccgaagctctcctatggtaatttgcactcctaattacaatcaatgattatttagtttcacgacggattaacttagtaattctacccaatctcttg |
33575012 |
T |
 |
| Q |
222 |
acctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataaccta |
321 |
Q |
| |
|
| |||||||||| |||| || | |||| || |||||||||||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||| |
|
|
| T |
33575011 |
atctagaattctccccgcaagtgacaaccccttaatctcttaagtgaattcgaaaccattggaggtattaaacgaatgttaatccctatatcataaccta |
33574912 |
T |
 |
| Q |
322 |
ataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcct |
421 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||| | ||||| || ||||||||||| | ||||||||||| |||| ||||| ||||| | |
|
|
| T |
33574911 |
ataatgatctatctctagcttgattacttaggttaaacctattacctaattcagagttaaaagttagggttagtggtcattcaatttctatgatcaatat |
33574812 |
T |
 |
| Q |
422 |
gcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactagacttttattgat-atgat |
520 |
Q |
| |
|
||| | | || |||||||| | ||||| || ||||||||| || |||||||| ||| |||||||||||||||||| ||||| |||||| | | |
|
|
| T |
33574811 |
gcatattcataaagctagggttaatagtctatcataaacatacataaggcattaaacacaaggtaatatgaataaaaactaaactttcattgatgttcaa |
33574712 |
T |
 |
| Q |
521 |
aggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
|||| ||||||||||||| ||||||||| | |||||||| |||||||| |
|
|
| T |
33574711 |
aggagttcaacaaattagggttcccatagggttacatcagattcatct |
33574664 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 105 - 580
Target Start/End: Complemental strand, 22159784 - 22159307
Alignment:
| Q |
105 |
tatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaa |
204 |
Q |
| |
|
|||||||||||| || |||||||| |||||||| |||||||| | ||||||||| || || |||||| ||||||||| ||||| ||||||||||||||| |
|
|
| T |
22159784 |
tatggttaagacctttgaatcctccgaagttctcctatggtaaatcgcactcctagttcaatcaatgactatctagttcaacgatagattaacaaagtaa |
22159685 |
T |
 |
| Q |
205 |
ttttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaat |
304 |
Q |
| |
|
| ||||||||||||||||||||| |||| ||| || |||||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22159684 |
ctctacccaatctcttgacctagagttctccccacaagtaacaaccccttaatctcttaagtgaattcgaaaccattggaggttttaacagaacgttaat |
22159585 |
T |
 |
| Q |
305 |
ccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatca |
404 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||||| || |||||||||||||||| | |||||| | ||||| ||||||| | |||| |||||| ||| |
|
|
| T |
22159584 |
ccctatgtcataacctaataatgatctatctctagtttgattacttaggttaaacctattacctagatcagagtcaaaagccagggttaatggtcattca |
22159485 |
T |
 |
| Q |
405 |
agttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaac-ataagaaaattattaaacataagataatatgaataaaaactag |
503 |
Q |
| |
|
| ||||| |||| || | | | || |||||| | | |||||| || |||||| ||| |||| |||||||| || ||||||||||||||||||| |
|
|
| T |
22159484 |
atctctaacatcaatttgtatattcataaagctatggttagtagtcgatgataaacaatacaaaaagcattaaacacaaagtaatatgaataaaaactag |
22159385 |
T |
 |
| Q |
504 |
acttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaacca |
580 |
Q |
| |
|
||||| ||||| | | | |||| ||||||||||||| |||||| || ||||||||| |||||||| | ||||||||| |
|
|
| T |
22159384 |
actttcattgacattcaaaggagttcaacaaattagggttcccgtaggattacatcggattcatctcattctcaacca |
22159307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 24 - 568
Target Start/End: Original strand, 15532324 - 15532870
Alignment:
| Q |
24 |
tgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggtttttt-gaaaattaa-agaggtatggttaagacattcg |
121 |
Q |
| |
|
||||||||||| ||||||| ||| | ||||||||||| |||||||||||||||| || ||||||| ||||||| | ||| ||||||||||| | |||| |
|
|
| T |
15532324 |
tgccctaggcagttgagttgatt-tagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattgagagaagtatggttaagtccttcg |
15532422 |
T |
 |
| Q |
122 |
aatcctctgaagttctattatggtaatttgcactcctatttta-agcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctctt |
220 |
Q |
| |
|
|||||||| ||| ||| | |||||||||||||||||| | | |||||||||| ||||| ||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
15532423 |
aatcctctaaagctctcctgtggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacagattaacttagtaattctacccaatctctt |
15532522 |
T |
 |
| Q |
221 |
gacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacct |
320 |
Q |
| |
|
||||||||||||| |||| || | |||| || |||||||||||| |||||||||||||| ||||||| ||||| | ||||||||||||||||||||||| |
|
|
| T |
15532523 |
gacctagaattctccccgcaagtgacaaccccttaatctcttaagtgaattcgaaaccaatggaggtattaac-gaacgttaatccctatatcataacct |
15532621 |
T |
 |
| Q |
321 |
aataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcc |
420 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||| | ||||| || ||||||||||||| | ||||||||||| |||| ||||| ||||| |
|
|
| T |
15532622 |
aataatgatctatctctagcttgattacttaggttaaacctattacctaattcagagttaaaagccagggttagtggtcattcaatttctatgatcaata |
15532721 |
T |
 |
| Q |
421 |
tgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactagacttttattgatatg-a |
519 |
Q |
| |
|
|||| | | || | |||||| | ||||| || |||||| || || ||||| || || ||||| |||||||||||| ||||| |||||| | | |
|
|
| T |
15532722 |
tgcatattcataacgctagggttaatagtctatcataaacgtacataaggcattaagcacaaagtaataagaataaaaactaaactttcattgatgttca |
15532821 |
T |
 |
| Q |
520 |
taggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
|||| ||||||||||||| ||||||||| | |||||||| |||||||| |
|
|
| T |
15532822 |
aaggagttcaacaaattagggttcccatagggttacatcagattcatct |
15532870 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 106 - 544
Target Start/End: Original strand, 26712549 - 26712991
Alignment:
| Q |
106 |
atggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaat |
205 |
Q |
| |
|
||||||||| | ||||||||||| || | ||| |||| ||||||||||||||| || || |||||||||| ||||| ||||||||||||| |||||| |
|
|
| T |
26712549 |
atggttaagtctttcgaatcctccgacgctctcctatgataatttgcactcctaattcaatcaatgattatttagtttcacgacagattaacttagtaat |
26712648 |
T |
 |
| Q |
206 |
tttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatc |
305 |
Q |
| |
|
| |||||||||||||||||||||||||| |||| || | |||| || |||||||||||| ||||||||||||| |||||||| |||| || |||||||| |
|
|
| T |
26712649 |
tctacccaatctcttgacctagaattctccccgcaagtgacaaccccttaatctcttaagtgaattcgaaaccgttggaggtattaaaagaacgttaatc |
26712748 |
T |
 |
| Q |
306 |
cctatatcataacctaataat--tg-tctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaat |
402 |
Q |
| |
|
||||| ||||||||||||||| || |||||||||||||| |||||||||||||||| | |||||||| ||||||||||||| | ||||||||||| | |
|
|
| T |
26712749 |
cctatgtcataacctaataatgatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagccagggttagtggtcatt |
26712848 |
T |
 |
| Q |
403 |
caagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaacta |
502 |
Q |
| |
|
||| ||||| ||||| |||| | | || |||||||| | |||||||| ||||||||| ||| |||||||| ||| ||||||||||||| |||| |
|
|
| T |
26712849 |
caatttctatgatcaatatgcatattcataaagctagggttaatagtcaatgataaacatacataaagcattaaacacaaggtaatatgaataaagacta |
26712948 |
T |
 |
| Q |
503 |
gacttttattgat-atgataggaattcaacaaattagagttcc |
544 |
Q |
| |
|
||||| |||||| | | |||| ||||||||||||| ||||| |
|
|
| T |
26712949 |
aactttcattgatgttcaaaggagttcaacaaattagggttcc |
26712991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 106 - 544
Target Start/End: Original strand, 26982287 - 26982729
Alignment:
| Q |
106 |
atggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaat |
205 |
Q |
| |
|
||||||||| | ||||||||||| || | ||| |||| ||||||||||||||| || || |||||||||| ||||| ||||||||||||| |||||| |
|
|
| T |
26982287 |
atggttaagtctttcgaatcctccgacgctctcctatgataatttgcactcctaattcaatcaatgattatttagtttcacgacagattaacttagtaat |
26982386 |
T |
 |
| Q |
206 |
tttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatc |
305 |
Q |
| |
|
| |||||||||||||||||||||||||| |||| || | |||| || |||||||||||| ||||||||||||| |||||||| |||| || |||||||| |
|
|
| T |
26982387 |
tctacccaatctcttgacctagaattctccccgcaagtgacaaccccttaatctcttaagtgaattcgaaaccgttggaggtattaaaagaacgttaatc |
26982486 |
T |
 |
| Q |
306 |
cctatatcataacctaataat--tg-tctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaat |
402 |
Q |
| |
|
||||| ||||||||||||||| || |||||||||||||| |||||||||||||||| | |||||||| ||||||||||||| | ||||||||||| | |
|
|
| T |
26982487 |
cctatgtcataacctaataatgatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagccagggttagtggtcatt |
26982586 |
T |
 |
| Q |
403 |
caagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaacta |
502 |
Q |
| |
|
||| ||||| ||||| |||| | | || |||||||| | |||||||| ||||||||| ||| |||||||| ||| ||||||||||||| |||| |
|
|
| T |
26982587 |
caatttctatgatcaatatgcatattcataaagctagggttaatagtcaatgataaacatacataaagcattaaacacaaggtaatatgaataaagacta |
26982686 |
T |
 |
| Q |
503 |
gacttttattgat-atgataggaattcaacaaattagagttcc |
544 |
Q |
| |
|
||||| |||||| | | |||| ||||||||||||| ||||| |
|
|
| T |
26982687 |
aactttcattgatgttcaaaggagttcaacaaattagggttcc |
26982729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 24 - 568
Target Start/End: Original strand, 15542506 - 15543052
Alignment:
| Q |
24 |
tgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggtttttt-gaaaattaa-agaggtatggttaagacattcg |
121 |
Q |
| |
|
||||||||||| ||||||| ||| | ||||||||||| |||||||||||||||| || ||||||| ||||||| | ||| ||||||||||| | |||| |
|
|
| T |
15542506 |
tgccctaggcagttgagttgatt-tagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattgagagaagtatggttaagtccttcg |
15542604 |
T |
 |
| Q |
122 |
aatcctctgaagttctattatggtaatttgcactcctatttta-agcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctctt |
220 |
Q |
| |
|
|||||||| ||| ||| | |||||||||||||||||| | | |||||||||| ||||| ||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
15542605 |
aatcctctaaagctctcctgtggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacagattaacttagtaattctacccaatctctt |
15542704 |
T |
 |
| Q |
221 |
gacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacct |
320 |
Q |
| |
|
||||||||||||| |||| || | |||| || || ||||||||| |||||||||||||| ||||||| ||||| | ||||||||||||||||||||||| |
|
|
| T |
15542705 |
gacctagaattctccccgcaagtgacaaccccttgatctcttaagtgaattcgaaaccaatggaggtattaac-gaacgttaatccctatatcataacct |
15542803 |
T |
 |
| Q |
321 |
aataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcc |
420 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||| | ||||| || ||||||||||||| | ||||||||||| |||| ||||| ||||| |
|
|
| T |
15542804 |
aataatgatctatctctagcttgattacttaggttaaacctattacctaattcagagttaaaagccagggttagtggtcattcaatttctatgatcaata |
15542903 |
T |
 |
| Q |
421 |
tgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactagacttttattgatatg-a |
519 |
Q |
| |
|
|||| | | || | |||||| | ||||| || |||||| || || ||||| || || ||||| |||||||||||| ||||| |||||| | | |
|
|
| T |
15542904 |
tgcatattcataacgctagggttaatagtctatcataaacgtacataaggcattaagcacaaagtaataagaataaaaactaaactttcattgatgttca |
15543003 |
T |
 |
| Q |
520 |
taggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
|||| ||||||||||||| ||||||||| | |||||||| |||||||| |
|
|
| T |
15543004 |
aaggagttcaacaaattagggttcccatagggttacatcagattcatct |
15543052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 104 - 568
Target Start/End: Original strand, 7650146 - 7650610
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagta |
203 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||| |||||||||||||||||||| || || |||||||||||||||| || || |||||||||| ||| |
|
|
| T |
7650146 |
gtatggttaagacatttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgattatctagtttaaagatagattaacaaggta |
7650245 |
T |
 |
| Q |
204 |
attttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaa |
303 |
Q |
| |
|
||| ||| ||||||||| |||||||||||| |||| || | |||| || |||||||||| | ||||||||||| | |||||||||||| || ||||| |
|
|
| T |
7650246 |
attctactcaatctctttacctagaattctccccgcaagtgacaaccccttaatctcttgagtgaattcgaaatcgctggaggttttaatagaaggttaa |
7650345 |
T |
 |
| Q |
304 |
tccctatatc---------ataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttag |
394 |
Q |
| |
|
||||||| || ||||||||||||| |||||||||||||| ||| ||||||||||| | |||||||| |||| |||||| ||||| |
|
|
| T |
7650346 |
tccctatgtcataacctaaataacctaataatgatctatctctagcttgattttttaggttaaacttattacctagttctgagtcaaaagc---ggttag |
7650442 |
T |
 |
| Q |
395 |
tggtcaatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaat |
494 |
Q |
| |
|
|||| | |||| |||||||||| |||| | | || ||| |||| | |||||| || ||||||||| |||| ||||||||||| ||| |||||| |
|
|
| T |
7650443 |
tggttattcaatctctaagatcaatttgcatattcataaagttagggttagtagtcgatgataaacatacaaaaaacattaaacataaagtaacatgaat |
7650542 |
T |
 |
| Q |
495 |
aaaaactagacttttattgatatgataggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
||| |||||||||| |||||||| ||| ||||||||||||| ||| |||||| ||||||||| |||||||| |
|
|
| T |
7650543 |
aaagactagactttcattgatat--tag---ttcaacaaattagggtt-ccataaaattacatcaaattcatct |
7650610 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 253 - 559
Target Start/End: Original strand, 11989171 - 11989478
Alignment:
| Q |
253 |
ttaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacctaataattgtctatctctagcttaattacttag |
352 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||||||| || |||||||| |||| | | ||||||||||| |||||||||| ||| ||||| ||| |
|
|
| T |
11989171 |
ttaatctcttaagtgaattcgaaaccgttggaggttttaatagaacgttaatctctatgttaaaacctaataatgatctatctctaacttgattacatag |
11989270 |
T |
 |
| Q |
353 |
gttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaa |
452 |
Q |
| |
|
||||||| | |||||| | ||||| |||||| ||||||||||| |||| |||||||||| || | | | || |||||||| | |||||| | |
|
|
| T |
11989271 |
gttaaacctaatacctagatcagagtcaaaagcgaaggttagtggtcattcaatctctaagatcaatttgtatattcataaagctagggttagtagtcga |
11989370 |
T |
 |
| Q |
453 |
taataaacataagaaaattattaaacataagataatatgaataaaaactagacttttattgata-tgataggaattcaacaaattagagttcccataaga |
551 |
Q |
| |
|
| ||||||||| |||| ||||||||||| |||||||||||||||||||||||| ||||||| | | |||| ||||||||||||| |||||||||| | |
|
|
| T |
11989371 |
tgataaacatacaaaaagcattaaacataaagtaatatgaataaaaactagactttcattgatattcaaaggagttcaacaaattagggttcccataaaa |
11989470 |
T |
 |
| Q |
552 |
ttacatca |
559 |
Q |
| |
|
|||||||| |
|
|
| T |
11989471 |
ttacatca |
11989478 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 11988974 - 11989127
Alignment:
| Q |
9 |
tattaaattcaatgttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaaagag--gta |
106 |
Q |
| |
|
|||||||||||||| | ||||||||| ||||||| ||| |||||||||||||||||||||||| |||||| || | |||| |||||||| |||| ||| |
|
|
| T |
11988974 |
tattaaattcaatggtcccctaggcagttgagttgatttttgtaacataaacagattaaaaacgataaaagat-tgattttagaaaattagagagaagta |
11989072 |
T |
 |
| Q |
107 |
tggttaagacattcgaatcctctgaagttct--attatggtaatttgcactccta |
159 |
Q |
| |
|
||||||||| ||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
11989073 |
aggttaagaccttcgaatcctccaaagttctcctatatggtaatttgcactccta |
11989127 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 586 - 654
Target Start/End: Original strand, 28562795 - 28562863
Alignment:
| Q |
586 |
gaaattagctagacatagaaatataaataaatagcatggaaaataaaattaaccatgaaaccatgttgt |
654 |
Q |
| |
|
||||||||||||||||||| ||| |||| |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
28562795 |
gaaattagctagacatagagatacaaattaatagcatgggaaataaaattaaccatgaaaccatgttgt |
28562863 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 586 - 654
Target Start/End: Original strand, 28566363 - 28566431
Alignment:
| Q |
586 |
gaaattagctagacatagaaatataaataaatagcatggaaaataaaattaaccatgaaaccatgttgt |
654 |
Q |
| |
|
||||||||||||||||||| ||| |||| |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
28566363 |
gaaattagctagacatagagatacaaattaatagcatgggaaataaaattaaccatgaaaccatgttgt |
28566431 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 582 - 665
Target Start/End: Complemental strand, 42062628 - 42062548
Alignment:
| Q |
582 |
aagagaaattagctagacatagaaatataaataaatagcatggaaaataaaattaaccatgaaaccatgttgttcctcatttct |
665 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||| ||| | ||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
42062628 |
aagagaaattagctagacatagagatacaaataaagagcgt-gaaaataaaattaaccatg--accatgttgttcctcaattct |
42062548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 314 - 357
Target Start/End: Original strand, 23993447 - 23993490
Alignment:
| Q |
314 |
ataacctaataattgtctatctctagcttaattacttaggttaa |
357 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
23993447 |
ataacctaataattgtctatctctagcttaatttcttaggttaa |
23993490 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 344
Target Start/End: Complemental strand, 13372011 - 13371859
Alignment:
| Q |
192 |
attaacaaagtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggtttta |
291 |
Q |
| |
|
|||||||||||| ||| | |||||||||||| ||||| ||| ||| || | ||||||| |||||||||||| |||||| ||| |||||||||||| |
|
|
| T |
13372011 |
attaacaaagtagtttaaatcaatctcttgacttagaactctcccctaaagtcacaatcccttaatctcttaagtgaattaaaaaatgttggaggtttta |
13371912 |
T |
 |
| Q |
292 |
acagtccgttaatccctatatcataacctaataattgtctatctctagcttaa |
344 |
Q |
| |
|
|| |||||||| || |||||||| ||| | |||||||||| |||||||| |
|
|
| T |
13371911 |
gtcgttcgttaatctataaatcataacttaagagttgtctatctatagcttaa |
13371859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17944882 - 17944841
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtt |
42 |
Q |
| |
|
||||||| |||||||||||||| ||||||||||| ||||||| |
|
|
| T |
17944882 |
aaaggatatattaaattcaatggtgccctaggcagttgagtt |
17944841 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0567 (Bit Score: 159; Significance: 3e-84; HSPs: 1)
Name: scaffold0567
Description:
Target: scaffold0567; HSP #1
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 86 - 580
Target Start/End: Original strand, 5995 - 6491
Alignment:
| Q |
86 |
tttttgaaaattaaagag--gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagtta |
183 |
Q |
| |
|
|||| |||||||| |||| ||||||||||||| ||||||||||| || ||||| |||||||||||||||| ||| || || |||||||||||||| | |
|
|
| T |
5995 |
ttttagaaaattagagagaagtatggttaagaccttcgaatcctccgaggttctcctatggtaatttgcactactaattcaaacaatgattatctaggtt |
6094 |
T |
 |
| Q |
184 |
aacgacagattaacaaagtaattttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattgg |
283 |
Q |
| |
|
|||||||||||||| | ||| | ||||||||||||||| |||||||||| |||| || | ||| || |||||||||||| ||||||| ||| |||||| |
|
|
| T |
6095 |
cacgacagattaacacaataactctacccaatctcttgatctagaattctccccgcaagtggcaaccccttaatctcttaagtgaattcaaaatcattgg |
6194 |
T |
 |
| Q |
284 |
aggttttaacagtccgttaatccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaa |
383 |
Q |
| |
|
|||||||||||| |||||| |||||| ||||||||||||||| ||||||||||| || ||||||||| |||||| | |||||||| ||||| |||| |
|
|
| T |
6195 |
aggttttaacagaacgttaaaccctatgtcataacctaataatgatctatctctaggttgattacttagattaaacttattacctagttcagagtcaaaa |
6294 |
T |
 |
| Q |
384 |
gccggtgttagtggtcaatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataag |
483 |
Q |
| |
|
| | | ||||||||||| |||| |||||||||| |||| | | || |||||||| | |||||| || ||||||||| |||| ||||||||||| |
|
|
| T |
6295 |
gtcagggttagtggtcattcaatctctaagatcaatttgcatattcataaagctagggttagtagtcgatgataaacatacaaaaagcattaaacataaa |
6394 |
T |
 |
| Q |
484 |
ataatatgaataaaaactagacttttattgata-tgataggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaacca |
580 |
Q |
| |
|
||| ||||||||| ||| |||||| ||||||| | | |||| |||||||||||| |||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
6395 |
gtaacatgaataaacact-gactttcattgatattcaaaggagttcaacaaattaaggttcccataagattacatcagattcatctaaatctcaacca |
6491 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0440 (Bit Score: 145; Significance: 6e-76; HSPs: 1)
Name: scaffold0440
Description:
Target: scaffold0440; HSP #1
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 26 - 400
Target Start/End: Complemental strand, 9982 - 9607
Alignment:
| Q |
26 |
ccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaa-agaggtatggttaagacattcgaat |
124 |
Q |
| |
|
||||||||| ||||||| ||| | ||||||||||| |||||||||||||||| || ||||||| ||||||| | ||| ||||||||||| | ||||||| |
|
|
| T |
9982 |
ccctaggcagttgagttgatt-tagtaacataaactgattaaaaacaataaataattggtttttagaaaattgagagaagtatggttaagtccttcgaat |
9884 |
T |
 |
| Q |
125 |
cctctgaagttctattatggtaatttgcactcctatttt-aagcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctcttgac |
223 |
Q |
| |
|
|||| |||| ||| ||||| |||||||||||||| | || |||||||||| ||||| ||||| ||||||| ||||||| |||||||||||||||| |
|
|
| T |
9883 |
cctccgaagctctcctatggcaatttgcactcctaaatacaatcaatgattatttagtttcacgacggattaacttagtaattctacccaatctcttgac |
9784 |
T |
 |
| Q |
224 |
ctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacctaat |
323 |
Q |
| |
|
|||||||||| |||| || | |||| || |||||||||||| |||||||||||||||||||||| |||| | |||||||||||||||||||||||||| |
|
|
| T |
9783 |
ctagaattctccccgcaagtgacaaccccttaatctcttaagtgaattcgaaaccattggaggtattaaacgaacgttaatccctatatcataacctaat |
9684 |
T |
 |
| Q |
324 |
aattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtca |
400 |
Q |
| |
|
||| ||||||| |||||| |||||||||||||||| | ||||| || ||||||||||||| | ||||||||||| |
|
|
| T |
9683 |
aatgatctatctttagcttgattacttaggttaaacctattacctaattcagagttaaaagccagggttagtggtca |
9607 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 141; Significance: 1e-73; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 24 - 568
Target Start/End: Original strand, 22626436 - 22626982
Alignment:
| Q |
24 |
tgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaa-agaggtatggttaagacattcga |
122 |
Q |
| |
|
||||||||||| ||||||| ||| | ||||||||||| |||||||||||||||| || || ||| ||||||| | ||| ||||||||||| | ||||| |
|
|
| T |
22626436 |
tgccctaggcagttgagttgatt-tagtaacataaactgattaaaaacaataaagaattggattta-gaaaattgagagaagtatggttaagtccttcga |
22626533 |
T |
 |
| Q |
123 |
atcctctgaagttctattatggtaatttgcactcctatttta-agcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctcttg |
221 |
Q |
| |
|
|||||| ||| ||| |||||||||||||||||||| | | |||||||||| ||||| ||||| ||||||| ||||||| || ||||||||||| |
|
|
| T |
22626534 |
atcctccaaagctctcctatggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacggattaacttagtaattctatccaatctcttg |
22626633 |
T |
 |
| Q |
222 |
acctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataaccta |
321 |
Q |
| |
|
|||||||||||| |||| || | |||| || |||||||||||| |||||||||||||||||||||| |||| | |||||||||||||||||||||||| |
|
|
| T |
22626634 |
acctagaattctccccgcaagtgacaaccccttaatctcttaagtgaattcgaaaccattggaggtattaaacgaacgttaatccctatatcataaccta |
22626733 |
T |
 |
| Q |
322 |
ataattgtc-tatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcc |
420 |
Q |
| |
|
||||| || |||||||||||| |||||||||||||||| | ||||| || ||||||||||||| | ||||||||||| |||| ||||| ||||| |
|
|
| T |
22626734 |
ataatgatcttatctctagcttgattacttaggttaaacctattacctaattcagagttaaaagccagggttagtggtcattcaatttctatgatcaata |
22626833 |
T |
 |
| Q |
421 |
tgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactagacttttattgat-atga |
519 |
Q |
| |
|
|||| | | || | |||||| | ||||| || ||||||||| || ||||| || || |||||||||||||||||| ||||| |||||| | | |
|
|
| T |
22626834 |
tgcatattcataacgctagggttaatagtctatcataaacatacataaggcattaagcacaaagtaatatgaataaaaactaaactttcattgatgttca |
22626933 |
T |
 |
| Q |
520 |
taggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
|||| ||||||||||||| ||||||||| |||||||||| |||||||| |
|
|
| T |
22626934 |
aaggagttcaacaaattagggttcccataggattacatcagattcatct |
22626982 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 24 - 508
Target Start/End: Original strand, 39563634 - 39564118
Alignment:
| Q |
24 |
tgccctaggcaattgagtttattcttgtaacataaacaga-ttaaaaacaataaaatataggttttttgaaaattaaagag--gtatggttaagacattc |
120 |
Q |
| |
|
||||||||||| ||||||| ||| |||||||||||||| | ||||||| | ||||| || |||||| |||||| |||| | ||||||||| | ||| |
|
|
| T |
39563634 |
tgccctaggcagttgagttgatt-ttgtaacataaacaaaattaaaaatagtaaaagattggtttta-gaaaatctgagagaagaatggttaagtccttc |
39563731 |
T |
 |
| Q |
121 |
gaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctctt |
220 |
Q |
| |
|
|||||||| || | ||| |||| ||||||||||||||| || || ||||| |||| ||||| ||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
39563732 |
gaatcctccgacgctctcctatgataatttgcactcctaattcaatcaatggttatttagtttcacgacagattaacttagtaattctacccaatctctt |
39563831 |
T |
 |
| Q |
221 |
gacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacct |
320 |
Q |
| |
|
||||||||||||| |||| || | |||| || |||||||||||| ||||||||||||| |||||||| |||| || ||||||||||||| ||||||||| |
|
|
| T |
39563832 |
gacctagaattctccccgcaagtgacaaccccttaatctcttaagtgaattcgaaaccgttggaggtattaaaagaacgttaatccctatgtcataacct |
39563931 |
T |
 |
| Q |
321 |
aataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcc |
420 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||| | |||||||| ||| ||||||| | | ||||||||||| |||| ||||| ||||| |
|
|
| T |
39563932 |
aataatgatctatctctagcttgattacttaggttaaacctattacctagttcaga-ttaaaagtcagggttagtggtcattcaatttctatgatcaata |
39564030 |
T |
 |
| Q |
421 |
tgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactagacttt |
508 |
Q |
| |
|
|||| | | || |||||||| | |||||||| ||||||||| ||| |||||||| ||| ||||||||||||| |||| ||||| |
|
|
| T |
39564031 |
tgcatattcataaagctagggttaatagtcaatgataaacatacataaagcattaaacacaaggtaatatgaataaagactaaacttt |
39564118 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 24 - 568
Target Start/End: Original strand, 11138694 - 11139238
Alignment:
| Q |
24 |
tgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaa-agaggtatggttaagacattcga |
122 |
Q |
| |
|
||||||||||| ||||||| ||| | ||||||||||| |||||||||||||| | || || || ||||||| | ||| ||||||||||| | ||||| |
|
|
| T |
11138694 |
tgccctaggcagttgagttgatt-tagtaacataaactgattaaaaacaatatagaattggattca-gaaaattgagagaagtatggttaagtccttcga |
11138791 |
T |
 |
| Q |
123 |
atcctctgaagttctattatggtaatttgcactcctatttta-agcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctcttg |
221 |
Q |
| |
|
|||||| ||| ||| |||||||||||||||||||| | | |||||||||| ||||| ||||| ||||||| ||||||| || ||||||||||| |
|
|
| T |
11138792 |
atcctccaaagctctcctatggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacggattaacttagtaattctatccaatctcttg |
11138891 |
T |
 |
| Q |
222 |
acctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataaccta |
321 |
Q |
| |
|
|||||||||||| |||| || | |||| | |||||||||||| ||||||||||||||| |||||| |||| | |||||||||||||||||||||||| |
|
|
| T |
11138892 |
acctagaattctccccgcaagtgacaactccttaatctcttaagtgaattcgaaaccataggaggtattaaacgaacgttaatccctatatcataaccta |
11138991 |
T |
 |
| Q |
322 |
ataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcct |
421 |
Q |
| |
|
||||| |||||||||||||| |||||| ||||||||| | | ||| || ||||||||||||| | |||||||| || |||| ||||| ||||| | |
|
|
| T |
11138992 |
ataatgatctatctctagcttgattactgaggttaaacctatta-ctatttcagagttaaaagccagggttagtggccattcaatttctatgatcaatat |
11139090 |
T |
 |
| Q |
422 |
gcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactagacttttattgat-atgat |
520 |
Q |
| |
|
||| | | || | |||||| | |||| || ||||||||| || ||||| || || |||||||||||||||||| ||||| |||||| | | |
|
|
| T |
11139091 |
gcatattcataacgctagggttaatagtttatcataaacatacataaggcattaagcacaaagtaatatgaataaaaactaaactttcattgatgttcaa |
11139190 |
T |
 |
| Q |
521 |
aggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
|||| ||||||||||||| ||||||||| |||||||||| |||||||| |
|
|
| T |
11139191 |
aggagttcaacaaattagggttcccataggattacatcagattcatct |
11139238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 104 - 358
Target Start/End: Complemental strand, 13979527 - 13979273
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagta |
203 |
Q |
| |
|
||||||||||||| || |||||||| |||| ||| |||||||||||||||||| | || || |||||||||| ||||| | ||||||||||| |||| |
|
|
| T |
13979527 |
gtatggttaagacctttgaatcctccgaagctctcctatggtaatttgcactccaagttcaaacaatgattatttagtttcatgacagattaacttagta |
13979428 |
T |
 |
| Q |
204 |
attttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaa |
303 |
Q |
| |
|
| | || |||||| |||||||||||||||| |||| || | |||| | |||||||||||| ||||||||||| | || ||||| |||| || |||||| |
|
|
| T |
13979427 |
actctatccaatcccttgacctagaattctccccgcaagtgacaacctcttaatctcttaagtgaattcgaaatcgttcgaggtattaaaagaacgttaa |
13979328 |
T |
 |
| Q |
304 |
tccctatatcataacctaataattgtctatctctagcttaattacttaggttaaa |
358 |
Q |
| |
|
||||||| ||||||||||||||| |||||||| | ||| |||||||| |||||| |
|
|
| T |
13979327 |
tccctatgtcataacctaataatgatctatctccaacttgattacttaagttaaa |
13979273 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 105 - 494
Target Start/End: Complemental strand, 35366415 - 35366028
Alignment:
| Q |
105 |
tatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaa |
204 |
Q |
| |
|
||||||||||| ||| |||||||| | ||||| || |||||||||||| || ||| || ||||| | || || || ||||||| |||||||| ||| |
|
|
| T |
35366415 |
tatggttaagatcttcaaatcctctaatgttcttctacggtaatttgcaccccaattc-aatcaatgttcatataatttaacgacaaattaacaagataa |
35366317 |
T |
 |
| Q |
205 |
ttttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaat |
304 |
Q |
| |
|
|| ||| |||||||||||||||||| ||| ||| | | ||||||| |||||||||||| ||||||| | || ||||||||||||||||||||||||| |
|
|
| T |
35366316 |
ttctactcaatctcttgacctagaactctctccgcgagtgacaatcccttaatctcttaagtgaattcaagactcttggaggttttaacagtccgttaat |
35366217 |
T |
 |
| Q |
305 |
ccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatca |
404 |
Q |
| |
|
|| | ||||| |||||||||| |||||||||| |||||||||||||||||||| | |||||| | ||||| ||||||| | ||||||||| ||| |
|
|
| T |
35366216 |
ccatgagtcatagcctaataattttctatctctaacttaattacttaggttaaacctattacctagatcagagtcaaaagccaaggctagtggtcattca |
35366117 |
T |
 |
| Q |
405 |
agttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaat |
494 |
Q |
| |
|
|||| |||||||| |||| | | | | ||||| || |||||||||||||||||||| || | |||||||| ||| |||||||||| |
|
|
| T |
35366116 |
agttttaagatcaatttgcacattcacgatgctagtgctagtagtcaataataaacataa-aacaacattaaacacaaggtaatatgaat |
35366028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 86 - 248
Target Start/End: Complemental strand, 46731555 - 46731391
Alignment:
| Q |
86 |
tttttgaaaattaaagag--gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagtta |
183 |
Q |
| |
|
|||| |||||||| |||| ||| ||||||||| ||||||||||| |||||||| |||||||||||||||||||| || || |||||||||||||||| |
|
|
| T |
46731555 |
ttttagaaaattagagagatgtaaggttaagaccttcgaatcctccgaagttctcatatggtaatttgcactcctaattcaatcaatgattatctagttc |
46731456 |
T |
 |
| Q |
184 |
aacgacagattaacaaagtaattttacccaatctcttgacctagaattcttcccggaaataacaa |
248 |
Q |
| |
|
||||||| ||||||||||||| | |||||||||||||||||| || |||| |||| || |||||| |
|
|
| T |
46731455 |
aacgacatattaacaaagtaactctacccaatctcttgacctggagttctccccgcaagtaacaa |
46731391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 105 - 517
Target Start/End: Complemental strand, 47412222 - 47411819
Alignment:
| Q |
105 |
tatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaa |
204 |
Q |
| |
|
|||| ||||||| || ||||||||| | ||||| || |||||||||||| | | || || ||||| | ||||| || ||| ||||||||||| ||| |
|
|
| T |
47412222 |
tatgattaagacctttgaatcctctaatgttcttctacggtaatttgcacccacaattcaatcaatgttcatctaatttaacaacagattaacacgataa |
47412123 |
T |
 |
| Q |
205 |
ttttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaat |
304 |
Q |
| |
|
|| ||| |||||||||||||||||||||| ||| || | |||||| |||||| |||||||| || ||| ||| ||||||||||| |||||| |
|
|
| T |
47412122 |
ttctactcaatctcttgacctagaattctctccgcaagtgacaatc--------tcttaagtgaattcgggactattagagattttaacagtctgttaat |
47412031 |
T |
 |
| Q |
305 |
ccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatca |
404 |
Q |
| |
|
| || ||| || ||||||||| |||||||||| |||||||||||||||||||| | |||||| | ||||| ||||| | | ||||| ||| ||| |
|
|
| T |
47412030 |
ctctgagtcacaatctaataattttctatctctaacttaattacttaggttaaacctattacctagatcagagtcaaaaggcaggactagtgatcattca |
47411931 |
T |
 |
| Q |
405 |
agttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactaga |
504 |
Q |
| |
|
||||||||||||| | || | | | ||| ||| || ||||||||||||||||||| || | |||||||| ||| |||||||||| |||||||| |
|
|
| T |
47411930 |
agttctaagatcaattttcatattcaagaagttagtgctagtagtcaataataaacatacaaacaacattaaacacaaggtaatatgaat-taaactaga |
47411832 |
T |
 |
| Q |
505 |
cttttattgatat |
517 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
47411831 |
ctttcattgatat |
47411819 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 586 - 654
Target Start/End: Complemental strand, 2783804 - 2783736
Alignment:
| Q |
586 |
gaaattagctagacatagaaatataaataaatagcatggaaaataaaattaaccatgaaaccatgttgt |
654 |
Q |
| |
|
||||||||||||||||||| ||| |||| |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
2783804 |
gaaattagctagacatagagatacaaattaatagcatgggaaataaaattaaccatgaaaccatgttgt |
2783736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 582 - 665
Target Start/End: Original strand, 18645107 - 18645187
Alignment:
| Q |
582 |
aagagaaattagctagacatagaaatataaataaatagcatggaaaataaaattaaccatgaaaccatgttgttcctcatttct |
665 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||| ||| | ||||||||||||||||||| ||| |||||||||||| |||| |
|
|
| T |
18645107 |
aagagaaattagctagacatagagatacaaataaagagcgt-gaaaataaaattaaccatg--accgtgttgttcctcaattct |
18645187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 586 - 665
Target Start/End: Complemental strand, 35412303 - 35412227
Alignment:
| Q |
586 |
gaaattagctagacatagaaatataaataaatagcatggaaaataaaattaaccatgaaaccatgttgttcctcatttct |
665 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| ||| | ||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
35412303 |
gaaattagctagacatagagatacaaataaagagcgt-gaaaataaaattaaccatg--accatgttgttcctcaattct |
35412227 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 521 - 580
Target Start/End: Complemental strand, 13979113 - 13979054
Alignment:
| Q |
521 |
aggaattcaacaaattagagttcccataagattacatcatattcatctaagtctcaacca |
580 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||| ||| |||| ||||||||| ||||| |
|
|
| T |
13979113 |
aggagttcaacaaattagggttcccataagattacctcagattcgtctaagtcttaacca |
13979054 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 50096925 - 50096848
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaa |
78 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||| ||||||| ||| ||||||||||||| | |||||||| ||||| |
|
|
| T |
50096925 |
aaaggatgtattaaattcaagagtgccctaagcagttgagttgatttttgtaacataaacgtaataaaaacagtaaaa |
50096848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 540 - 580
Target Start/End: Original strand, 31878312 - 31878352
Alignment:
| Q |
540 |
gttcccataagattacatcatattcatctaagtctcaacca |
580 |
Q |
| |
|
|||| |||||||||| |||| |||||||||||||||||||| |
|
|
| T |
31878312 |
gttctcataagattatatcagattcatctaagtctcaacca |
31878352 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0063 (Bit Score: 136; Significance: 1e-70; HSPs: 1)
Name: scaffold0063
Description:
Target: scaffold0063; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 106 - 568
Target Start/End: Original strand, 7199 - 7662
Alignment:
| Q |
106 |
atggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaat |
205 |
Q |
| |
|
||||||||| | |||||||||||||| ||| |||||||||||| ||||||| || || |||||||||| ||||| ||||||||||||| |||||| |
|
|
| T |
7199 |
atggttaagtccttcgaatcctctgatactctcctatggtaatttgtactcctaattcaatcaatgattatttagtttcacgacagattaacttagtaat |
7298 |
T |
 |
| Q |
206 |
tttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatc |
305 |
Q |
| |
|
| || |||||||||||| ||||||||| |||| || | |||| || |||||||||||| ||||||||||||| |||||||| |||| || |||||||| |
|
|
| T |
7299 |
tctattcaatctcttgacttagaattctccccgcaagtgacaaccccttaatctcttaagtgaattcgaaaccgttggaggtattaaaagaacgttaatc |
7398 |
T |
 |
| Q |
306 |
cctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaa |
405 |
Q |
| |
|
||||| ||||||||||||||| |||||||||||||| |||||||||||||||| | |||||||| |||| ||||||| | |||||||||||||||| |
|
|
| T |
7399 |
cctatgtcataacctaataatgatctatctctagctttattacttaggttaaacctattacctagttctgagtaaaaagccagggttagtggtcaatcaa |
7498 |
T |
 |
| Q |
406 |
gttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactagac |
505 |
Q |
| |
|
||||| ||||| |||| | | || |||||||| | ||||| || ||||||||| ||| ||||||| || |||||||||||||||||| || |
|
|
| T |
7499 |
attctatgatcaatatgcatattcataaagctagggttaatagtcgatgataaacatacataaagcattaaactcaaagtaatatgaataaaaactaaac |
7598 |
T |
 |
| Q |
506 |
ttttattgat-atgataggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
||| ||| || | | |||| ||||||||||||| |||||| || |||||||||| |||||||| |
|
|
| T |
7599 |
tttcatttatgttcaaaggagttcaacaaattagggttcccgtaggattacatcagattcatct |
7662 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0264 (Bit Score: 121; Significance: 1e-61; HSPs: 1)
Name: scaffold0264
Description:
Target: scaffold0264; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 55 - 417
Target Start/End: Original strand, 24337 - 24701
Alignment:
| Q |
55 |
ataaacagattaaaaacaataaaatataggttttttgaaaattaa-agaggtatggttaagacattcgaatcctctgaagttctattatggtaatttgca |
153 |
Q |
| |
|
|||||| |||||||||||||||| || ||||||| ||||||| | ||| | ||||||||| | ||||||||||| |||| ||| |||||||||||||| |
|
|
| T |
24337 |
ataaactgattaaaaacaataaagaattggtttttagaaaattgagagaagcatggttaagtccttcgaatcctccgaagctctcctatggtaatttgca |
24436 |
T |
 |
| Q |
154 |
ctcctatttt-aagcaatgattatctagttaaacgacagattaacaaagtaattttacccaatctcttgacctagaattcttcccggaaataacaatcca |
252 |
Q |
| |
|
|||||| | || ||||||||| |||| ||||| ||||||| ||||||| |||||||||||||||||||||||||| |||| || | |||| || |
|
|
| T |
24437 |
ctcctaaatacaataaatgattatttagtatcacgacggattaacttagtaattctacccaatctcttgacctagaattctccccgcaagtgacaacccc |
24536 |
T |
 |
| Q |
253 |
ttaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacctaataattgtctatctctagcttaattacttag |
352 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| | |||||||||||| ||||||||| |
|
|
| T |
24537 |
ttaatctcttatgtgaattcgaaaccattggaggaattaaataaacgttaatccctatatcataacctaataatgatatatctctagcttgattacttag |
24636 |
T |
 |
| Q |
353 |
gttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatca |
417 |
Q |
| |
|
||||||| | |||| ||| ||||||||||||| | ||||||||||| |||| ||||| ||||| |
|
|
| T |
24637 |
gttaaacctattacctggttcagagttaaaagccagggttagtggtcattcaatttctatgatca |
24701 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0500 (Bit Score: 111; Significance: 1e-55; HSPs: 1)
Name: scaffold0500
Description:
Target: scaffold0500; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 106 - 568
Target Start/End: Complemental strand, 2732 - 2267
Alignment:
| Q |
106 |
atggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagtaat |
205 |
Q |
| |
|
||||||||| | |||||||||||||| ||| |||||||| ||||||||||| || || |||||||||| ||||| ||||||||||||| |||||| |
|
|
| T |
2732 |
atggttaagtccttcgaatcctctgatactctcctatggtaacttgcactcctaattcaatcaatgattatttagtttcacgacagattaacttagtaat |
2633 |
T |
 |
| Q |
206 |
ttt--acccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaa |
303 |
Q |
| |
|
|| || |||||||||||||||||||||| |||| || | |||| || | |||||||||| ||||||||||||| |||||||| |||| || |||| | |
|
|
| T |
2632 |
attctactcaatctcttgacctagaattctccccgcaagtgacaacccctaaatctcttaagtgaattcgaaaccgttggaggtattaaaagaacgttga |
2533 |
T |
 |
| Q |
304 |
tccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagccggtgttagtggtcaatc |
403 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||| ||||||||||| |||| | |||||||| ||||| ||||||| | ||||||||||| | |
|
|
| T |
2532 |
tccctatgtcataacctaataatgatctatctctagcttgattacttaggtcaaacctattacctagttcagagtaaaaagccagggttagtggtcattt |
2433 |
T |
 |
| Q |
404 |
aagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataataaacataagaaaattattaaacataagataatatgaataaaaactag |
503 |
Q |
| |
|
| ||||| ||||| |||| | | || |||||||| | |||| || ||||||||| ||| |||||||| || ||||||||||||| |||| |
|
|
| T |
2432 |
attttctatgatcaatatgcatattcataaagctagggttaatagttgatgataaacatacataaagcattaaacacaaagtaatatgaataaagactaa |
2333 |
T |
 |
| Q |
504 |
acttttattg-atatgataggaattcaacaaattagagttcccataagattacatcatattcatct |
568 |
Q |
| |
|
||||| |||| | | | |||| ||||||||||||| |||||| || |||||||||| |||||||| |
|
|
| T |
2332 |
actttcattgaagttcaaaggagttcaacaaattagggttcccgtaggattacatcagattcatct |
2267 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0665 (Bit Score: 106; Significance: 1e-52; HSPs: 1)
Name: scaffold0665
Description:
Target: scaffold0665; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 256 - 568
Target Start/End: Original strand, 1 - 314
Alignment:
| Q |
256 |
atctcttaaatgaattcgaaaccattggaggttttaacagtccgttaatccctatatcataacctaataattgtctatctctagcttaattacttaggtt |
355 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||||| || ||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
1 |
atctcttaagtgaattcgaaaccgttggaggttttaaaagaacgttaatccctatgtcataacctaataatgatctatctctagcttgattacttaggtt |
100 |
T |
 |
| Q |
356 |
aaacattccacctagtttagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcctgcaaacttatcaagctaggacttgtagtcaataa |
455 |
Q |
| |
|
|||| | |||||| | ||||| |||| || | |||||| |||| | || ||||||||||| |||| | | || |||||||| | ||||||||| | |
|
|
| T |
101 |
aaacttattacctagatcagagtcaaaaaccagggttagtagtcatttaatctctaagatcagtttgcatattcataaagctagggttagtagtcaatga |
200 |
T |
 |
| Q |
456 |
taaacataagaaaattattaaacataagataatatgaataaaaactagacttttattgata-tgataggaattcaacaaattagagttcccataagatta |
554 |
Q |
| |
|
|||||||| |||| || |||||||| |||||||||| ||||||||||||| | ||||| | | |||| ||||||||||||| ||||||||| ||||| |
|
|
| T |
201 |
taaacatacaaaaagcataaaacataaagtaatatgaattaaaactagactttcaatgatattcaaaggagttcaacaaattagggttcccataggatta |
300 |
T |
 |
| Q |
555 |
catcatattcatct |
568 |
Q |
| |
|
||||| |||||||| |
|
|
| T |
301 |
catcagattcatct |
314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0352 (Bit Score: 103; Significance: 7e-51; HSPs: 1)
Name: scaffold0352
Description:
Target: scaffold0352; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 104 - 386
Target Start/End: Original strand, 2808 - 3090
Alignment:
| Q |
104 |
gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactcctattttaagcaatgattatctagttaaacgacagattaacaaagta |
203 |
Q |
| |
|
|||| |||||||| || |||||||| |||| ||| |||||||||||||||||||| || || |||||||||| ||||| |||| ||||||| |||| |
|
|
| T |
2808 |
gtatcgttaagacctttgaatcctccgaagctctcctatggtaatttgcactcctagttcaatcaatgattatatagtttcacgaaagattaaggtagta |
2907 |
T |
 |
| Q |
204 |
attttacccaatctcttgacctagaattcttcccggaaataacaatccattaatctcttaaatgaattcgaaaccattggaggttttaacagtccgttaa |
303 |
Q |
| |
|
||| |||| ||||||||||||||||||||| |||| || | |||| || |||||||||||| ||||||| |||| ||||||||| |||| || |||||| |
|
|
| T |
2908 |
attctaccaaatctcttgacctagaattctccccgcaagtgacaaccccttaatctcttaagtgaattcaaaactattggaggtattaaaagaacgttaa |
3007 |
T |
 |
| Q |
304 |
tccctatatcataacctaataattgtctatctctagcttaattacttaggttaaacattccacctagtttagagttaaaagcc |
386 |
Q |
| |
|
||| | | |||||| |||||||| |||||||||||||| |||||||||||||||| | |||||||| |||||| |||||| |
|
|
| T |
3008 |
tccttgtgtcataatctaataatgatctatctctagcttgattacttaggttaaacgtattacctagttcagagttgaaagcc |
3090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0363 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0363
Description:
Target: scaffold0363; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 109 - 267
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatg-ttgccctaggcaattgagtttattcttgtaacataaacagattaaaaacaataaaatataggttttttgaaaattaa |
99 |
Q |
| |
|
||||||| | |||||||||||| |||||||||||| ||||||| || || |||||||||| |||||||||||||||| | |||||| ||| |||| |
|
|
| T |
109 |
aaaggatatgttaaattcaatggttgccctaggcagttgagttggttttt--aacataaacaaattaaaaacaataaaagtt-ggttttaagaatattag |
205 |
T |
 |
| Q |
100 |
agag--gtatggttaagacattcgaatcctctgaagttctattatggtaatttgcactccta |
159 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||| |||| |||| ||||||||||||||| |
|
|
| T |
206 |
agagaagtatggttaagacattcgaatcctccgaatttctcctatgataatttgcactccta |
267 |
T |
 |
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Target: scaffold0363; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 323 - 363
Alignment:
| Q |
298 |
cgttaatccctatatcataacctaataattgtctatctcta |
338 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
323 |
cgttaatccctatatcataatctaataatgatctatctcta |
363 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0134 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0134
Description:
Target: scaffold0134; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7498 - 7457
Alignment:
| Q |
1 |
aaaggatgtattaaattcaatgttgccctaggcaattgagtt |
42 |
Q |
| |
|
||||||| |||||||||||||| ||||||||||| ||||||| |
|
|
| T |
7498 |
aaaggatatattaaattcaatggtgccctaggcagttgagtt |
7457 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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