View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4013_high_18 (Length: 236)
Name: NF4013_high_18
Description: NF4013
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4013_high_18 |
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Alignment Details
Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 6737768 - 6737548
Alignment:
| Q |
1 |
cagggttgtgttgggttatatacatatatatcaaatggaactgcacagcaactactcttatgagtgaatttatagtctgtacccgccggccatctaataa |
100 |
Q |
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| T |
6737768 |
cagggttgtgttgggttatatacatatatatcaaatggaactgcacagcaactacacttatgagtgaatttatagtctgtgcccgccggccatctaataa |
6737669 |
T |
|
| Q |
101 |
tttcattagaaattttacacctctcaacataaatccacaaattgataataaataagacac--tattgatactcttgttaaggtttaaacagaacatgtat |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |
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| T |
6737668 |
tttcattagaaattttacacctctcaacataaatccacaagttgataataaataagacacaatattgatactcttgttaaggtttaaatagaacatgtat |
6737569 |
T |
|
| Q |
199 |
gcactggaaacactgtgatat |
219 |
Q |
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||||||||||||||||||||| |
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| T |
6737568 |
gcactggaaacactgtgatat |
6737548 |
T |
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