View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4013_high_22 (Length: 217)
Name: NF4013_high_22
Description: NF4013
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4013_high_22 |
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Alignment Details
Target: chr5 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 20513236 - 20513435
Alignment:
| Q |
1 |
gaccctatattatatttaattaaggacaaacctgagtatcagtatcatttcctacaagtagtctctccgcatagccatacctttcatggcgttccagtat |
100 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20513236 |
gaccctatattatatttaattagggacaaacctgagtatcagtatcatttcctacaagtagtctctccgcatagccatacctttcatggcgttccagtat |
20513335 |
T |
|
| Q |
101 |
ctgctccatgctgtttaatcaatgaaacagtatagcaaaattacaatataatatatagttctcaaacaatgttattttcttgaaaccctcgattcaaaca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||| |
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| T |
20513336 |
ctgctccatgctgtttaatcaatgaaacagtatagcaaaattacactataatatatagttctcaaacaatgttattttcttgaaaccttcaattcaaaca |
20513435 |
T |
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