View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4013_low_18 (Length: 244)
Name: NF4013_low_18
Description: NF4013
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4013_low_18 |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 1881945 - 1881727
Alignment:
| Q |
13 |
gagagtaagaggagtagttcatttcgtttagagttcataactacgaagtcaagtcccggtgcaagaagcagtcctggtccaagaagcggtcctggtccaa |
112 |
Q |
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| T |
1881945 |
gagagtaagaggagtagttcatttcgtttagagttcataactacgaagtcaagtcccggtgcaagaagcagtcctggtccaagaagcggtcctggtccaa |
1881846 |
T |
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| Q |
113 |
gaagcgacaactcgagtttcagatatgtatatgatgaaagcagaagtcctaaatatgttagaaaatattccagatatgggggagtaactagaagtcctat |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1881845 |
gaagcgacaactcgagtttcagatatgtatatgatgaaagcagaagtcctaaatatgttagaaaatattccagatatgggggagtaactagaagtcctat |
1881746 |
T |
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| Q |
213 |
aaaaatagaggttgttgat |
231 |
Q |
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||||||||||||||||||| |
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| T |
1881745 |
aaaaatagaggttgttgat |
1881727 |
T |
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