View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4014_high_24 (Length: 354)
Name: NF4014_high_24
Description: NF4014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4014_high_24 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 3 - 309
Target Start/End: Original strand, 25630146 - 25630451
Alignment:
| Q |
3 |
aaagagattaacaaatgtgttgtattgtaaatttttaacagcaaccatttagtgagaaagccttaaattatcgaattgaaagataaaaaatatcactgga |
102 |
Q |
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| T |
25630146 |
aaagagagtaaccaaaatgttgtattgtaaatttttaatagcaaccattcagtgagaaagccttaaattatcgaattgaaagataaaaaatatcactgga |
25630245 |
T |
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| Q |
103 |
aaaagaacaggtatcaatggnnnnnnntggtagaatgaatgagtctatgtagaggatgtgtgtgccgaattcagttagtgggaaggaaataaaaaccgaa |
202 |
Q |
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||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |
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| T |
25630246 |
aaaagaacaagtatcaatg-aaaaaaatggtagaatgaatgagtctatgtagaggatgtgtgtgccgaattcagttagtgggaaggaaataaaagcctaa |
25630344 |
T |
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| Q |
203 |
acgttatatttgtagtcggcttctatttgccaaactgttattgcatgagattatagagtgagttatggcatgtgcattcctcagttggacttcttattga |
302 |
Q |
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|||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
25630345 |
acgttatatttgtagtcggcttctattttccaaactgttgttgcatgagattatagagtgagttatggcatgtgcattcctcagttagacttcttattga |
25630444 |
T |
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| Q |
303 |
aattcaa |
309 |
Q |
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| ||||| |
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| T |
25630445 |
acttcaa |
25630451 |
T |
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