View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4014_high_67 (Length: 242)
Name: NF4014_high_67
Description: NF4014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4014_high_67 |
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Alignment Details
Target: chr6 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 9301126 - 9301355
Alignment:
| Q |
1 |
caaagaatatggatattgatctattttttgtaagagaaaaggtgctagctgaacaacttattgtgaagcacattcctgctgatgaccaatgggaagatat |
100 |
Q |
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| T |
9301126 |
caaagaatatggatattgatctattttttgtaagagaaaaggtgctagctgaacaacttattgtgaagcacattcctgctgatgaccaatgggcagatat |
9301225 |
T |
|
| Q |
101 |
tcttaccaagtctatttccagtaccaagt---tttccttactagtagtggaatgcaacataattgtaatagaacagaaaatcaatgaaaaattgtttgac |
197 |
Q |
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|||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9301226 |
tcttaccaagtctatttccagtgccaagtttctttccttactagtagtggaatgcaacataattgtaatagaacagaaaatcaatgaaaaattgtttgac |
9301325 |
T |
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| Q |
198 |
actttctctcaaattctaacaatccaagtg |
227 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
9301326 |
actttctctcaaattctaacaatccaagtg |
9301355 |
T |
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