View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4014_high_83 (Length: 221)
Name: NF4014_high_83
Description: NF4014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4014_high_83 |
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Alignment Details
Target: chr8 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 30 - 207
Target Start/End: Complemental strand, 27293838 - 27293661
Alignment:
| Q |
30 |
tataattggacgaatcgggattcgaaccctatcattttagtattttttccaattgatttagatttcatttctaacttagttaaatgacaaattcaaccag |
129 |
Q |
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| T |
27293838 |
tataattggacgaaccgggattcgaaccctatcattttagtattttttccaattgatttagatttcatttctaacttagttaaatgacaaattcaaccag |
27293739 |
T |
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| Q |
130 |
aataggtaaggaacagaggttcaccttatcttatccatatcctacaagacaaacttaataatctccctccatcatcat |
207 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27293738 |
aataggtaaggaacagagtttcaccttatcttatccatatcctacaagacaaacttaataatctccctccatcatcat |
27293661 |
T |
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