View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4014_low_71 (Length: 239)
Name: NF4014_low_71
Description: NF4014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4014_low_71 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 36799342 - 36799565
Alignment:
| Q |
1 |
aaactaaatccatgctagcctataaataattaattaaaaacatattaatatgaagtgtaacaaaataagagagtagtgtgtaacacaattcatcgtgaaa |
100 |
Q |
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| T |
36799342 |
aaactaaatccatgctagcctataaataattaattaaaaacacattaatatgaagtgtaacaaaataagagagtagtgtgtaacacaattcatcgtgaaa |
36799441 |
T |
|
| Q |
101 |
taattattaactacaccttagaattggacgatgatggctctacatgcataggctgagaaggaaaaatgttaagagttggtggcctcattcctgatgttga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36799442 |
taattattaactacaccttagaattggacgatgatggctctacatgcataggctgagaaggaaaaatgttaagagttggtggcctcattcctgatgttga |
36799541 |
T |
|
| Q |
201 |
attctctgtggagacgcaaatatt |
224 |
Q |
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|||||||||||||| ||||||||| |
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| T |
36799542 |
attctctgtggagatgcaaatatt |
36799565 |
T |
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