View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4015_high_13 (Length: 325)

Name: NF4015_high_13
Description: NF4015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4015_high_13
NF4015_high_13
[»] chr3 (15 HSPs)
chr3 (16-325)||(22435848-22436157)
chr3 (28-325)||(22367141-22367438)
chr3 (16-297)||(22357247-22357528)
chr3 (16-295)||(22467198-22467477)
chr3 (16-295)||(22629693-22629969)
chr3 (16-227)||(22442054-22442268)
chr3 (16-295)||(22353062-22353338)
chr3 (16-294)||(22430418-22430696)
chr3 (16-295)||(37930109-37930386)
chr3 (16-295)||(22634756-22635032)
chr3 (24-212)||(22457819-22458007)
chr3 (24-212)||(22480800-22480988)
chr3 (25-93)||(22614708-22614776)
chr3 (29-83)||(21938118-21938172)
chr3 (29-85)||(30988750-30988806)
[»] chr4 (1 HSPs)
chr4 (173-295)||(29604681-29604803)
[»] chr7 (2 HSPs)
chr7 (30-109)||(872145-872224)
chr7 (30-109)||(1233422-1233501)
[»] chr1 (3 HSPs)
chr1 (27-93)||(34990180-34990246)
chr1 (25-93)||(34976332-34976400)
chr1 (25-93)||(34983443-34983511)


Alignment Details
Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 325
Target Start/End: Complemental strand, 22436157 - 22435848
Alignment:
Q  16 ggaagaataaaaagttgtcgtgttcatgatctagtgcatgcgatgatccttgaaaaatatgaggatttaagcttttgccagaatattattgaagcaagac 115  Q
    |||||| ||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||||| ||| |  |  |    
T  22436157 ggaagagtaaaaagttgtcgtgttcatgatttagtgcatgcaatgatccttgagaaatatgaggatttaagtttttgcaagaatattactgaggacaatc 22436058  T
Q  116 aattgcctttaagtggaatgattcggcgcctatcaatagcacccaattctgataatctaatggaaggtattgaaagctcacatgttcgatcactgctagt 215  Q
    ||||  |||||| | || ||| ||| ||||||||||| ||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22436057 aattttctttaactagagtgactcgacgcctatcaatggcaaccagttcttataatctaatggaaggtattgaaagctcacatgttcgatcactgctagt 22435958  T
Q  216 tctcgaacctaatacattacctaaatcctttgtaaggacgatccctgcaaaatataggcggttgaaggtacttgctttgagctcaaaacaacttgaaatt 315  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22435957 tctcgaacctaatacattacctaaatcctttgtaagggcgatccctgcaaaatataggcggttgaaggtacttgctttaagctcaaaacaacttgaaatt 22435858  T
Q  316 cctcatgatt 325  Q
    ||||||||||    
T  22435857 cctcatgatt 22435848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 28 - 325
Target Start/End: Complemental strand, 22367438 - 22367141
Alignment:
Q  28 agttgtcgtgttcatgatctagtgcatgcgatgatccttgaaaaatatgaggatttaagcttttgccagaatattattgaagcaagacaattgcctttaa 127  Q
    ||||| ||||||||||||||||||||||| ||||||||| | ||| |||||||||||||||||||| ||| |||||  || |  ||||||||||||| ||    
T  22367438 agttgccgtgttcatgatctagtgcatgcaatgatccttaataaacatgaggatttaagcttttgcaagagtattaccgaggacagacaattgccttcaa 22367339  T
Q  128 gtggaatgattcggcgcctatcaatagcacccaattctgataatctaatggaaggtattgaaagctcacatgttcgatcactgctagttctcgaacctaa 227  Q
     |||||||||||| ||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22367338 ctggaatgattcgacgcctatcaatagcatcaagttctgataatctaatggaaggtattgaaagctcacatgttcgatcgctgctagttctcgaacctaa 22367239  T
Q  228 tacattacctaaatcctttgtaaggacgatccctgcaaaatataggcggttgaaggtacttgctttgagctcaaaacaacttgaaattcctcatgatt 325  Q
     ||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||| |||||||| |||| |||||||||||||||||    
T  22367238 aacattacttaaatcctttgtaaggacgatccctacaaaatataggtggttgaaggtgcttactttaagctcaaaccaacatgaaattcctcatgatt 22367141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 16 - 297
Target Start/End: Complemental strand, 22357528 - 22357247
Alignment:
Q  16 ggaagaataaaaagttgtcgtgttcatgatctagtgcatgcgatgatccttgaaaaatatgaggatttaagcttttgccagaatattattgaagcaagac 115  Q
    |||||| ||||| |||||||||||||||||||||||||||  ||||||||||||||| || || |||||||||||||| ||||||||| ||| |  | ||    
T  22357528 ggaagagtaaaacgttgtcgtgttcatgatctagtgcatgaaatgatccttgaaaaacataagcatttaagcttttgcgagaatattactgagggcaaac 22357429  T
Q  116 aattgcctttaagtggaatgattcggcgcctatcaatagcacccaattctgataatctaatggaaggtattgaaagctcacatgttcgatcactgctagt 215  Q
    ||||| |||||| |||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| ||    
T  22357428 aattgtctttaactggaatgattcgacgcctatcaatagcacccaattatgataatcgaatggaaggtattgaaagctcacatgttcgatcattgcttgt 22357329  T
Q  216 tctcgaacctaatacattacctaaatcctttgtaaggacgatccctgcaaaatataggcggttgaaggtacttgctttgagc 297  Q
    | |||||||| | | || || | |||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||    
T  22357328 tttcgaacctcaaagatcacttgaatcctttgtaaagacgatccctacaaaatataggcggttgaaggtgcttgctttgagc 22357247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 16 - 295
Target Start/End: Complemental strand, 22467477 - 22467198
Alignment:
Q  16 ggaagaataaaaagttgtcgtgttcatgatctagtgcatgcgatgatccttgaaaaatatgaggatttaagcttttgccagaatattattgaagcaagac 115  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||||| ||| |  | ||    
T  22467477 ggaagagtaaaaagttgtcgtgttcatgatctagtgcatgcaatgatccttgataaatatgaggatttaagtttttgcaagaatattactgaggacaaac 22467378  T
Q  116 aattgcctttaagtggaatgattcggcgcctatcaatagcacccaattctgataatctaatggaaggtattgaaagctcacatgttcgatcactgctagt 215  Q
    ||||| |||||| |||||||||||| ||||||||||||| | | |  ||||||||| ||||| ||| |||||||| |||||||||||||||||||||  |    
T  22467377 aattgtctttaactggaatgattcgacgcctatcaatagaaactacctctgataatttaatgaaagttattgaaaactcacatgttcgatcactgcttat 22467278  T
Q  216 tctcgaacctaatacattacctaaatcctttgtaaggacgatccctgcaaaatataggcggttgaaggtacttgctttga 295  Q
    | ||  ||| || |||| || ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  22467277 tttcacaccaaagacatcacttaaatcctttgtaaggacgatccctacaaaatataggcggttgaaggtgcttgctttga 22467198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 16 - 295
Target Start/End: Complemental strand, 22629969 - 22629693
Alignment:
Q  16 ggaagaataaaaagttgtcgtgttcatgatctagtgcatgcgatgatccttgaaaaatatgaggatttaagcttttgccagaatattattgaag-caaga 114  Q
    |||||| |||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||||||||| | ||||     
T  22629969 ggaagagtaaaaagttgtcgtgtacatgatctagtgcatgcaatgatccttgagaaatatgaggatttaagtttttgcaagaatattattgaggacaag- 22629871  T
Q  115 caattgcctttaagtggaatgattcggcgcctatcaatagcacccaattctgataatctaatggaaggtattgaaagctcacatgttcgatcactgctag 214  Q
    |||||| |||||| |||||||||| | ||||||||||||||| | |   |||||||| ||||| || ||||||||| ||||||||||||||||||||| |    
T  22629870 caattgtctttaactggaatgatttgacgcctatcaatagcaacta---ctgataatttaatgaaaagtattgaaaactcacatgttcgatcactgcttg 22629774  T
Q  215 ttctcgaacctaatacattacctaaatcctttgtaaggacgatccctgcaaaatataggcggttgaaggtacttgctttga 295  Q
    || ||  ||| ||||||| || |||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||||||    
T  22629773 ttttcacaccaaatacatcacttaaatcctttgtaaagacaatccctacaaaatataggcggttgaaggtgcttgctttga 22629693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 22442268 - 22442054
Alignment:
Q  16 ggaagaataaaaagttgtcgtgttcatgatctagtgcatgcgatgatccttgaaaaatatgaggatttaagcttttgccagaatattattgaagcaagac 115  Q
    |||||| |||||||||| ||||||||||||||||||||||  ||||||||||||||| || || |||||||||||||| ||||||||| ||| | || ||    
T  22442268 ggaagagtaaaaagttgccgtgttcatgatctagtgcatgaaatgatccttgaaaaacataagcatttaagcttttgcgagaatattactgagggaaaac 22442169  T
Q  116 aattgcctttaagtggaatgattcggcgcctatcaatagcacccaattctgataatc---taatggaaggtattgaaagctcacatgttcgatcactgct 212  Q
    ||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||   |||||||||| || || |||||||||||||||||||||||    
T  22442168 aattgtctttaactggaatgattcgacgcctatcaatagcacccaattctgataatctaataatggaaggaatagatagctcacatgttcgatcactgct 22442069  T
Q  213 agttctcgaacctaa 227  Q
     ||||||||||||||    
T  22442068 tgttctcgaacctaa 22442054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 16 - 295
Target Start/End: Complemental strand, 22353338 - 22353062
Alignment:
Q  16 ggaagaataaaaagttgtcgtgttcatgatctagtgcatgcgatgatccttgaaaaatatgaggatttaagcttttgccagaatattattgaagcaagac 115  Q
    |||||| ||||||||||||||||||| |||||||||||||  |||||||||  |||||||||||||||||| |||||| |||||||||    ||||| ||    
T  22353338 ggaagagtaaaaagttgtcgtgttcacgatctagtgcatgaaatgatccttagaaaatatgaggatttaagtttttgcaagaatattacg--agcaa-ac 22353242  T
Q  116 aattgcctttaagtggaatgattcggcgcctatcaatagcacccaattctgataatctaatggaaggtattgaaagctcacatgttcgatcactgctagt 215  Q
    || || | |||| |||||||||| | ||||||||||||||| | | |||||||||  ||||| || ||||||||| ||||||||||||||||||||| ||    
T  22353241 aactgtcattaactggaatgatttgacgcctatcaatagcaactagttctgataagttaatgaaaagtattgaaaactcacatgttcgatcactgcttgt 22353142  T
Q  216 tctcgaacctaatacattacctaaatcctttgtaaggacgatccctgcaaaatataggcggttgaaggtacttgctttga 295  Q
    |||   || ||| |||| ||  |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  22353141 tctgagacataaaacatcactaaaatcctttgtaaggacgatccctacaaaatataggcggttgaaggtgcttgctttga 22353062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 16 - 294
Target Start/End: Complemental strand, 22430696 - 22430418
Alignment:
Q  16 ggaagaataaaaagttgtcgtgttcatgatctagtgcatgcgatgatccttgaaaaatatgaggatttaagcttttgccagaatattattga-agcaaga 114  Q
    |||||| ||| |||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||  || |||| |  || | |||      
T  22430696 ggaagagtaagaagttgtcgtgttcatgatctagtgcatgaaatgatccttaaaaaatatgaggatttaagcttttgtaagtatatcaccgagaacaat- 22430598  T
Q  115 caattgcctttaagtggaatgattcggcgcctatcaatagcacccaattctgataatctaatggaaggtattgaaagctcacatgttcgatcactgctag 214  Q
    ||||||  ||||| |||||||||||  ||||||||||||||||||||||| | || |||||||||||||||||||| | |||||||||||||| |||| |    
T  22430597 caattgtatttaactggaatgattcaacgcctatcaatagcacccaattcaggtattctaatggaaggtattgaaaacccacatgttcgatcagtgcttg 22430498  T
Q  215 ttctcgaacctaatacattacctaaatcctttgtaaggacgatccctgcaaaatataggcggttgaaggtacttgctttg 294  Q
    |||||  |  ||| |||| || | |||||||||| ||||  |||||  ||| |||||||||||||||||| |||||||||    
T  22430497 ttctcacaaataaaacatcacttgaatcctttgtgaggagaatcccaacaacatataggcggttgaaggtgcttgctttg 22430418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 295
Target Start/End: Complemental strand, 37930386 - 37930109
Alignment:
Q  16 ggaagaataaaaagttgtcgtgttcatgatctagtgcatgcgatgatcctt-gaaaaatatgaggatttaagcttttgccagaatattattgaagcaaga 114  Q
    |||||| |||||||||||||||||||||||||||||||||  ||||||||| || |||| |  ||||||||| |||||| ||||||||| | | |  | |    
T  37930386 ggaagagtaaaaagttgtcgtgttcatgatctagtgcatgaaatgatcctttgacaaatttatggatttaagtttttgcgagaatattacttagggcaaa 37930287  T
Q  115 caattgcctttaagtggaatgattcggcgcctatcaatagcacccaattctgataatctaatggaaggtattgaaagctcacatgttcgatcactgctag 214  Q
     ||||| ||   |  ||||| ||| | |||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||      
T  37930286 aaattgtct---accggaataatttgacgcctatcaatagcacccaattctaataatctaatggaaggtattgaaagttcacgtgttcgatcactgctta 37930190  T
Q  215 ttctcgaacctaatacattacctaaatcctttgtaaggacgatccctgcaaaatataggcggttgaaggtacttgctttga 295  Q
    |||| |||||| | |||| ||  ||||||||||| ||||  |||||| ||| |||||| || |||||||| ||||||||||    
T  37930189 ttctagaacctcaaacatcactcaaatcctttgttaggagaatccctacaacatatagccgattgaaggtgcttgctttga 37930109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 295
Target Start/End: Complemental strand, 22635032 - 22634756
Alignment:
Q  16 ggaagaataaaaagttgtcgtgttcatgatctagtgcatgcgatgatccttgaaaaatatgaggatttaagcttttgccagaatattattgaagcaagac 115  Q
    |||||| |||||||||| || |||||||||||||||||||  ||||||||||| |||| | |||||||||| |||||| |||||||| || | |  | |     
T  22635032 ggaagagtaaaaagttgccgcgttcatgatctagtgcatgaaatgatccttgacaaatttaaggatttaagtttttgcaagaatatttttaagggcaaaa 22634933  T
Q  116 aattgcctttaagtggaatgattcggcgcctatcaatagcacccaattctgataatctaatggaaggtattgaaagctcacatgttcgatcactgctagt 215  Q
    | | | ||     |||||||||||| || |||||||||||| |||||||||||||||||| ||||| |||||||||||||  | |||||||| ||||  |    
T  22634932 attggtctgc---tggaatgattcgacgtctatcaatagcatccaattctgataatctaagggaagatattgaaagctcaagtattcgatcattgcttat 22634836  T
Q  216 tctcgaacctaatacattacctaaatcctttgtaaggacgatccctgcaaaatataggcggttgaaggtacttgctttga 295  Q
    |||||||||| | |||| |  | |||||||||| || |  ||||||  |  |||||||||||||||||| ||||||||||    
T  22634835 tctcgaacctcaaacatcagttgaatcctttgtgagtagaatccctagagcatataggcggttgaaggtgcttgctttga 22634756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 212
Target Start/End: Complemental strand, 22458007 - 22457819
Alignment:
Q  24 aaaaagttgtcgtgttcatgatctagtgcatgcgatgatccttgaaaaatatgaggatttaagcttttgccagaatattattgaagcaaga-caattgcc 122  Q
    |||||||||| ||||||||||||| ||||||||  ||||||||||||||| ||| || ||||| |||||| |||||||||  | || | || ||||   |    
T  22458007 aaaaagttgttgtgttcatgatctggtgcatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcg-aggatgaccaatcatc 22457909  T
Q  123 tttaagtggaatgattcggcgcctatcaatagcacccaattctgataatctaatggaaggtattgaaagctcacatgttcgatcactgct 212  Q
    ||||||||| ||| |||| |||||||||||||||  ||  | ||| ||| | ||||||  |||||||| |||||| ||||||||||||||    
T  22457908 tttaagtgggatggttcgacgcctatcaatagcaatcagatttgacaatttgatggaaaatattgaaaactcacaggttcgatcactgct 22457819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 212
Target Start/End: Complemental strand, 22480988 - 22480800
Alignment:
Q  24 aaaaagttgtcgtgttcatgatctagtgcatgcgatgatccttgaaaaatatgaggatttaagcttttgccagaatattattgaagcaaga-caattgcc 122  Q
    |||||||||| ||||||||||||| ||||||||  ||||||||||||||| ||| || ||||| |||||| |||||||||  | || | || ||||   |    
T  22480988 aaaaagttgttgtgttcatgatctggtgcatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcg-aggatgaccaatcatc 22480890  T
Q  123 tttaagtggaatgattcggcgcctatcaatagcacccaattctgataatctaatggaaggtattgaaagctcacatgttcgatcactgct 212  Q
    ||||||||| ||| |||| |||||||||||||||  ||  | ||| ||| | ||||||  |||||||| |||||| ||||||||||||||    
T  22480889 tttaagtgggatggttcgacgcctatcaatagcaatcagatttgacaatttgatggaaaatattgaaaactcacaggttcgatcactgct 22480800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 22614776 - 22614708
Alignment:
Q  25 aaaagttgtcgtgttcatgatctagtgcatgcgatgatccttgaaaaatatgaggatttaagcttttgc 93  Q
    |||||||||||||||||||||||| | | || ||||||| ||||||||| | |||||||||| ||||||    
T  22614776 aaaagttgtcgtgttcatgatctattacgtgtgatgatctttgaaaaatttaaggatttaagtttttgc 22614708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 21938118 - 21938172
Alignment:
Q  29 gttgtcgtgttcatgatctagtgcatgcgatgatccttgaaaaatatgaggattt 83  Q
    |||||||||||||||||||| | | ||  ||||||||||||||| ||||||||||    
T  21938118 gttgtcgtgttcatgatctaatacgtgatatgatccttgaaaaagatgaggattt 21938172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 30988806 - 30988750
Alignment:
Q  29 gttgtcgtgttcatgatctagtgcatgcgatgatccttgaaaaatatgaggatttaa 85  Q
    |||||||||||||||||||| | |  |  |||||||||||||||| |||||||||||    
T  30988806 gttgtcgtgttcatgatctaatacgcgatatgatccttgaaaaatttgaggatttaa 30988750  T

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Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 29604803 - 29604681
Alignment:
Q  173 taatggaaggtattgaaagctcacatgttcgatcactgctagttctcgaacctaatacattacctaaatcctttgtaaggacgatccctgcaaaatatag 272  Q
    |||||||||||||||||| ||||||||||||||||||  | |||| |  |||||| ||||||| | ||||||||| |||||  |||||| ||| ||| ||    
T  29604803 taatggaaggtattgaaaactcacatgttcgatcactttttgttcacccacctaaaacattacttgaatcctttgcaaggagaatccctacaagatacag 29604704  T
Q  273 gcggttgaaggtacttgctttga 295  Q
    | |||||||||| ||||||||||    
T  29604703 gtggttgaaggtgcttgctttga 29604681  T

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Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 872224 - 872145
Alignment:
Q  30 ttgtcgtgttcatgatctagtgcatgcgatgatccttgaaaaatatgaggatttaagcttttgccagaatattattgaag 109  Q
    ||||||||||||||||||| | ||||   ||||||||||||||| |||||||||||  |||||| || |||||| |||||    
T  872224 ttgtcgtgttcatgatctactacatgatttgatccttgaaaaatttgaggatttaaatttttgcaagcatattagtgaag 872145  T

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Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 1233501 - 1233422
Alignment:
Q  30 ttgtcgtgttcatgatctagtgcatgcgatgatccttgaaaaatatgaggatttaagcttttgccagaatattattgaag 109  Q
    ||||||||||||||||||| | ||||   ||||||||||||||| |||||||||||  |||||| || |||||| |||||    
T  1233501 ttgtcgtgttcatgatctactacatgatttgatccttgaaaaatttgaggatttaaatttttgcaagcatattagtgaag 1233422  T

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Target: chr1 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 34990180 - 34990246
Alignment:
Q  27 aagttgtcgtgttcatgatctagtgcatgcgatgatccttgaaaaatatgaggatttaagcttttgc 93  Q
    ||||||| |||||||||||||  | |||  ||||||||||||||| | |||||||||||| ||||||    
T  34990180 aagttgttgtgttcatgatctgatacatatgatgatccttgaaaagtgtgaggatttaagtttttgc 34990246  T

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Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 34976332 - 34976400
Alignment:
Q  25 aaaagttgtcgtgttcatgatctagtgcatgcgatgatccttgaaaaatatgaggatttaagcttttgc 93  Q
    ||||||||| |||||||||||||  | | |  ||||||||||||||| | |||||||||||| ||||||    
T  34976332 aaaagttgttgtgttcatgatctgatacgtatgatgatccttgaaaagtgtgaggatttaagtttttgc 34976400  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 34983443 - 34983511
Alignment:
Q  25 aaaagttgtcgtgttcatgatctagtgcatgcgatgatccttgaaaaatatgaggatttaagcttttgc 93  Q
    ||||||||| |||||||||||||  | | |  ||||||||||||||| | |||||||||||| ||||||    
T  34983443 aaaagttgttgtgttcatgatctgatacgtatgatgatccttgaaaagtgtgaggatttaagtttttgc 34983511  T

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