View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4015_low_4 (Length: 508)

Name: NF4015_low_4
Description: NF4015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4015_low_4
NF4015_low_4
[»] chr4 (72 HSPs)
chr4 (1-488)||(48731013-48731501)
chr4 (146-326)||(36543738-36543918)
chr4 (146-326)||(9469734-9469914)
chr4 (329-469)||(48739078-48739220)
chr4 (146-326)||(53369829-53370009)
chr4 (146-320)||(21441538-21441712)
chr4 (160-320)||(36156303-36156463)
chr4 (146-326)||(45674792-45674972)
chr4 (146-326)||(56224102-56224282)
chr4 (146-326)||(19852935-19853115)
chr4 (146-326)||(50605965-50606145)
chr4 (156-326)||(15697086-15697256)
chr4 (157-320)||(40797798-40797961)
chr4 (146-320)||(50146927-50147101)
chr4 (145-326)||(11055229-11055410)
chr4 (146-326)||(48977533-48977713)
chr4 (146-316)||(44791256-44791426)
chr4 (177-326)||(7505517-7505666)
chr4 (189-326)||(12789555-12789692)
chr4 (157-326)||(22721296-22721464)
chr4 (188-320)||(51995077-51995209)
chr4 (157-320)||(12673037-12673200)
chr4 (145-320)||(26632892-26633067)
chr4 (146-320)||(32397707-32397881)
chr4 (160-326)||(52706188-52706354)
chr4 (157-326)||(80465-80634)
chr4 (145-326)||(22184459-22184640)
chr4 (157-326)||(46944547-46944716)
chr4 (146-265)||(49820939-49821058)
chr4 (146-265)||(52813558-52813677)
chr4 (145-326)||(48339102-48339283)
chr4 (146-234)||(53369645-53369733)
chr4 (157-259)||(25134542-25134644)
chr4 (173-320)||(49083243-49083390)
chr4 (155-326)||(49405638-49405809)
chr4 (188-320)||(9222141-9222271)
chr4 (146-326)||(19455161-19455341)
chr4 (157-312)||(48151143-48151298)
chr4 (156-326)||(27891354-27891523)
chr4 (157-326)||(24007906-24008075)
chr4 (146-285)||(43812101-43812240)
chr4 (189-259)||(6866173-6866243)
chr4 (145-231)||(16742423-16742509)
chr4 (234-326)||(49376773-49376866)
chr4 (159-255)||(1803468-1803564)
chr4 (159-231)||(38493075-38493147)
chr4 (188-326)||(13455700-13455838)
chr4 (155-326)||(48802478-48802650)
chr4 (161-236)||(24550049-24550124)
chr4 (188-326)||(51407952-51408090)
chr4 (159-232)||(25608750-25608823)
chr4 (144-265)||(44378205-44378326)
chr4 (176-265)||(52733765-52733853)
chr4 (157-326)||(55891988-55892157)
chr4 (220-320)||(4274565-4274665)
chr4 (197-317)||(34980516-34980636)
chr4 (145-229)||(43387224-43387308)
chr4 (200-259)||(5764643-5764702)
chr4 (200-259)||(5766887-5766946)
chr4 (202-265)||(34718152-34718215)
chr4 (197-320)||(39736691-39736814)
chr4 (214-259)||(13761824-13761869)
chr4 (156-257)||(43798295-43798396)
chr4 (171-320)||(49059799-49059948)
chr4 (196-260)||(25102666-25102730)
chr4 (191-259)||(50710840-50710908)
chr4 (159-231)||(41822079-41822153)
chr4 (201-259)||(5762615-5762673)
chr4 (201-259)||(5769185-5769243)
chr4 (225-326)||(38791728-38791828)
chr4 (208-261)||(41857160-41857213)
chr4 (147-231)||(27285594-27285678)
[»] chr3 (42 HSPs)
chr3 (153-326)||(46293216-46293389)
chr3 (146-326)||(39135311-39135491)
chr3 (153-319)||(39469541-39469707)
chr3 (146-326)||(54393446-54393626)
chr3 (145-326)||(9505124-9505305)
chr3 (1-144)||(39135024-39135171)
chr3 (146-320)||(39942809-39942983)
chr3 (146-320)||(41609845-41610018)
chr3 (153-326)||(32689133-32689306)
chr3 (146-326)||(33438734-33438914)
chr3 (157-326)||(40943529-40943698)
chr3 (157-326)||(12710670-12710839)
chr3 (157-326)||(19560777-19560946)
chr3 (1-144)||(46293429-46293578)
chr3 (145-320)||(52934768-52934943)
chr3 (145-326)||(25253658-25253839)
chr3 (157-326)||(30662134-30662303)
chr3 (145-265)||(28242539-28242659)
chr3 (157-320)||(20550211-20550374)
chr3 (160-265)||(5418649-5418754)
chr3 (189-326)||(26049543-26049680)
chr3 (146-326)||(44574483-44574663)
chr3 (153-326)||(23206311-23206483)
chr3 (189-326)||(52199429-52199566)
chr3 (145-255)||(28700953-28701063)
chr3 (145-246)||(52199345-52199446)
chr3 (156-262)||(50965370-50965477)
chr3 (156-262)||(51068505-51068612)
chr3 (188-273)||(54432247-54432332)
chr3 (173-319)||(1674613-1674759)
chr3 (146-236)||(53529683-53529773)
chr3 (199-320)||(18074586-18074707)
chr3 (210-319)||(30743593-30743702)
chr3 (189-314)||(31589622-31589747)
chr3 (185-308)||(15822370-15822493)
chr3 (251-326)||(54432180-54432255)
chr3 (1-39)||(39470703-39470741)
chr3 (223-325)||(45714730-45714832)
chr3 (156-265)||(26136300-26136409)
chr3 (156-256)||(1072782-1072882)
chr3 (146-252)||(45995257-45995362)
chr3 (240-320)||(47782130-47782210)
[»] chr7 (61 HSPs)
chr7 (146-326)||(7447838-7448018)
chr7 (149-320)||(20400961-20401132)
chr7 (146-320)||(5776139-5776313)
chr7 (146-320)||(45176207-45176381)
chr7 (146-326)||(665850-666030)
chr7 (157-326)||(33898947-33899116)
chr7 (146-320)||(37334240-37334414)
chr7 (146-326)||(3942138-3942318)
chr7 (146-326)||(5794939-5795119)
chr7 (146-320)||(43052834-43053008)
chr7 (188-320)||(26719819-26719951)
chr7 (160-320)||(45055704-45055864)
chr7 (160-326)||(11595799-11595965)
chr7 (188-326)||(18249996-18250134)
chr7 (146-326)||(22075025-22075205)
chr7 (154-326)||(36926969-36927141)
chr7 (146-325)||(3930720-3930899)
chr7 (146-326)||(28949761-28949941)
chr7 (146-265)||(48505852-48505971)
chr7 (1-134)||(7447583-7447721)
chr7 (189-326)||(17025364-17025501)
chr7 (160-307)||(40480072-40480220)
chr7 (146-326)||(42072045-42072225)
chr7 (189-320)||(18740227-18740358)
chr7 (161-259)||(23237587-23237685)
chr7 (145-326)||(44421904-44422086)
chr7 (188-326)||(49034227-49034365)
chr7 (145-326)||(36472400-36472581)
chr7 (157-326)||(46573615-46573784)
chr7 (146-265)||(26216234-26216353)
chr7 (148-318)||(10618885-10619055)
chr7 (189-319)||(21760593-21760723)
chr7 (145-265)||(33935469-33935589)
chr7 (199-326)||(33124710-33124837)
chr7 (156-326)||(222229-222399)
chr7 (146-256)||(15434205-15434315)
chr7 (157-319)||(23227009-23227171)
chr7 (157-319)||(23236162-23236324)
chr7 (208-326)||(33019325-33019443)
chr7 (145-326)||(37401569-37401750)
chr7 (145-265)||(48634408-48634528)
chr7 (156-326)||(10096443-10096613)
chr7 (161-222)||(23223561-23223622)
chr7 (156-256)||(29037853-29037953)
chr7 (189-259)||(17608717-17608787)
chr7 (156-326)||(33171537-33171707)
chr7 (157-326)||(32356934-32357103)
chr7 (146-326)||(27231542-27231722)
chr7 (188-326)||(35543559-35543694)
chr7 (199-315)||(46652647-46652763)
chr7 (146-237)||(44994056-44994147)
chr7 (226-320)||(388988-389082)
chr7 (159-325)||(31491790-31491956)
chr7 (211-320)||(37106853-37106962)
chr7 (208-257)||(37250058-37250107)
chr7 (191-259)||(37239840-37239908)
chr7 (156-235)||(2466611-2466690)
chr7 (199-236)||(29527401-29527438)
chr7 (290-326)||(15434311-15434347)
chr7 (189-265)||(30919427-30919503)
chr7 (242-326)||(41449798-41449882)
[»] chr5 (44 HSPs)
chr5 (146-326)||(3801367-3801547)
chr5 (155-326)||(38522864-38523035)
chr5 (146-326)||(31620825-31621005)
chr5 (146-320)||(32156955-32157120)
chr5 (146-326)||(27906055-27906235)
chr5 (160-326)||(41783296-41783462)
chr5 (160-319)||(14500716-14500875)
chr5 (146-325)||(18880149-18880328)
chr5 (160-326)||(26218018-26218184)
chr5 (157-326)||(27450584-27450753)
chr5 (145-320)||(1840696-1840871)
chr5 (146-320)||(20190594-20190767)
chr5 (157-326)||(10493953-10494122)
chr5 (146-326)||(15933117-15933300)
chr5 (157-319)||(39407374-39407536)
chr5 (153-326)||(20188937-20189110)
chr5 (189-326)||(27196077-27196214)
chr5 (157-317)||(30660919-30661079)
chr5 (157-326)||(34719660-34719829)
chr5 (162-302)||(11136034-11136173)
chr5 (145-265)||(19282178-19282298)
chr5 (156-320)||(31021830-31021994)
chr5 (199-326)||(29328054-29328180)
chr5 (157-326)||(26298279-26298448)
chr5 (160-319)||(2675987-2676146)
chr5 (155-326)||(32945024-32945195)
chr5 (157-319)||(26299815-26299977)
chr5 (199-310)||(40056382-40056493)
chr5 (157-255)||(39409108-39409206)
chr5 (157-265)||(34723717-34723825)
chr5 (157-320)||(34857315-34857478)
chr5 (156-231)||(43386694-43386769)
chr5 (157-326)||(19716151-19716315)
chr5 (147-319)||(39414140-39414312)
chr5 (196-320)||(34724763-34724887)
chr5 (156-326)||(10327897-10328067)
chr5 (157-320)||(36523719-36523886)
chr5 (160-233)||(4983402-4983475)
chr5 (156-288)||(1225318-1225450)
chr5 (156-224)||(3457793-3457861)
chr5 (157-237)||(30051422-30051502)
chr5 (196-265)||(24536014-24536083)
chr5 (188-255)||(28246731-28246798)
chr5 (244-320)||(27876104-27876180)
[»] scaffold0022 (1 HSPs)
scaffold0022 (144-320)||(124490-124666)
[»] chr1 (59 HSPs)
chr1 (146-326)||(24469820-24470000)
chr1 (146-326)||(35810675-35810855)
chr1 (146-326)||(47602865-47603045)
chr1 (153-326)||(32179822-32179995)
chr1 (146-326)||(36419058-36419238)
chr1 (157-320)||(40159639-40159802)
chr1 (146-321)||(7596350-7596525)
chr1 (146-320)||(20347625-20347797)
chr1 (146-320)||(42916123-42916297)
chr1 (146-320)||(46264953-46265127)
chr1 (159-320)||(20349116-20349277)
chr1 (160-326)||(43087469-43087635)
chr1 (159-320)||(45653441-45653601)
chr1 (160-320)||(19508499-19508659)
chr1 (145-320)||(23915606-23915781)
chr1 (145-326)||(15306449-15306630)
chr1 (153-326)||(25124888-25125061)
chr1 (157-326)||(29677522-29677691)
chr1 (146-326)||(7702792-7702972)
chr1 (146-326)||(23916767-23916947)
chr1 (146-326)||(37441189-37441369)
chr1 (194-326)||(44596522-44596654)
chr1 (147-326)||(13645183-13645362)
chr1 (189-320)||(28006350-28006481)
chr1 (157-319)||(5204479-5204641)
chr1 (196-326)||(15257174-15257304)
chr1 (153-326)||(42937038-42937211)
chr1 (145-265)||(31869550-31869670)
chr1 (211-326)||(14578588-14578703)
chr1 (156-326)||(39802770-39802940)
chr1 (188-326)||(50447340-50447478)
chr1 (145-326)||(36119028-36119208)
chr1 (157-326)||(38061181-38061350)
chr1 (188-320)||(7956323-7956455)
chr1 (159-326)||(45581011-45581178)
chr1 (220-326)||(12224578-12224684)
chr1 (199-320)||(15014325-15014446)
chr1 (189-326)||(24575909-24576046)
chr1 (155-320)||(31816534-31816699)
chr1 (157-320)||(47983223-47983386)
chr1 (146-327)||(15662906-15663087)
chr1 (146-255)||(40002851-40002960)
chr1 (185-320)||(7995967-7996102)
chr1 (208-326)||(7016078-7016196)
chr1 (146-319)||(29113535-29113707)
chr1 (197-308)||(33233574-33233682)
chr1 (209-320)||(21680665-21680776)
chr1 (188-326)||(27076518-27076656)
chr1 (203-320)||(14101876-14101994)
chr1 (189-266)||(14770579-14770656)
chr1 (173-258)||(14796572-14796657)
chr1 (173-258)||(14805446-14805531)
chr1 (222-326)||(6413272-6413376)
chr1 (173-265)||(11991256-11991348)
chr1 (162-265)||(48575144-48575247)
chr1 (231-326)||(7841665-7841759)
chr1 (157-252)||(8828303-8828398)
chr1 (202-265)||(30251437-30251500)
chr1 (196-328)||(572417-572550)
[»] chr2 (43 HSPs)
chr2 (149-326)||(33831455-33831632)
chr2 (160-320)||(2646983-2647143)
chr2 (146-320)||(26436311-26436484)
chr2 (153-326)||(27634635-27634808)
chr2 (145-326)||(3409191-3409372)
chr2 (146-326)||(36538613-36538793)
chr2 (146-326)||(41959100-41959280)
chr2 (146-317)||(34064662-34064833)
chr2 (153-288)||(38409612-38409747)
chr2 (157-326)||(40458889-40459058)
chr2 (154-326)||(11027873-11028045)
chr2 (162-326)||(30713129-30713293)
chr2 (184-326)||(27464575-27464717)
chr2 (159-327)||(11006976-11007142)
chr2 (154-326)||(27902442-27902613)
chr2 (199-319)||(33163990-33164110)
chr2 (146-256)||(34116246-34116356)
chr2 (156-325)||(24844670-24844839)
chr2 (156-259)||(14103234-14103337)
chr2 (146-240)||(39690127-39690221)
chr2 (198-319)||(17616276-17616397)
chr2 (145-326)||(44740486-44740666)
chr2 (189-267)||(1094457-1094535)
chr2 (146-320)||(41332188-41332362)
chr2 (156-329)||(10412407-10412580)
chr2 (196-325)||(17368994-17369122)
chr2 (159-320)||(18667721-18667882)
chr2 (218-320)||(20203723-20203825)
chr2 (197-265)||(2578087-2578155)
chr2 (186-265)||(13829875-13829954)
chr2 (355-453)||(7241919-7242017)
chr2 (145-231)||(40680177-40680263)
chr2 (156-257)||(9963726-9963827)
chr2 (233-326)||(29806950-29807043)
chr2 (146-215)||(33831384-33831453)
chr2 (80-144)||(20987565-20987629)
chr2 (248-320)||(35796284-35796356)
chr2 (189-320)||(9753107-9753237)
chr2 (146-220)||(20987771-20987845)
chr2 (198-320)||(45383147-45383269)
chr2 (159-227)||(44935737-44935805)
chr2 (157-235)||(2328385-2328463)
chr2 (196-262)||(10196870-10196936)
[»] chr8 (19 HSPs)
chr8 (146-326)||(453440-453620)
chr8 (146-320)||(11161529-11161703)
chr8 (146-320)||(34516095-34516269)
chr8 (160-326)||(43967481-43967647)
chr8 (146-319)||(27189092-27189265)
chr8 (156-326)||(3307901-3308071)
chr8 (160-326)||(33279980-33280146)
chr8 (160-326)||(34655006-34655172)
chr8 (166-285)||(23181132-23181251)
chr8 (156-326)||(9412527-9412697)
chr8 (229-326)||(39478090-39478187)
chr8 (157-325)||(22563974-22564142)
chr8 (226-320)||(43384831-43384925)
chr8 (200-307)||(9135963-9136070)
chr8 (213-319)||(32740663-32740769)
chr8 (165-237)||(10749311-10749383)
chr8 (200-262)||(35058318-35058380)
chr8 (203-320)||(24854613-24854730)
chr8 (189-265)||(1091727-1091803)
[»] scaffold0316 (1 HSPs)
scaffold0316 (146-326)||(19253-19433)
[»] chr6 (23 HSPs)
chr6 (145-320)||(4441310-4441485)
chr6 (147-326)||(5640255-5640434)
chr6 (157-326)||(3081721-3081890)
chr6 (146-326)||(10961799-10961979)
chr6 (188-326)||(13312021-13312161)
chr6 (160-326)||(33110429-33110595)
chr6 (146-326)||(9950763-9950943)
chr6 (146-326)||(10346678-10346858)
chr6 (157-319)||(7437272-7437434)
chr6 (146-326)||(8200599-8200768)
chr6 (145-326)||(1501804-1501985)
chr6 (157-326)||(22295884-22296053)
chr6 (145-265)||(6999223-6999343)
chr6 (157-265)||(18095487-18095595)
chr6 (157-320)||(18099784-18099947)
chr6 (146-280)||(27984939-27985073)
chr6 (155-320)||(17441123-17441289)
chr6 (156-215)||(3901548-3901607)
chr6 (273-320)||(12428960-12429007)
chr6 (199-258)||(32163551-32163610)
chr6 (199-232)||(13355722-13355755)
chr6 (176-320)||(9463363-9463507)
chr6 (199-231)||(12428897-12428929)
[»] scaffold0260 (2 HSPs)
scaffold0260 (146-320)||(9948-10120)
scaffold0260 (159-320)||(11439-11600)
[»] scaffold0224 (1 HSPs)
scaffold0224 (146-320)||(7317-7491)
[»] scaffold0223 (1 HSPs)
scaffold0223 (155-326)||(14392-14563)
[»] scaffold0954 (1 HSPs)
scaffold0954 (161-259)||(254-352)
[»] scaffold0204 (1 HSPs)
scaffold0204 (145-326)||(26624-26805)
[»] scaffold0171 (1 HSPs)
scaffold0171 (189-326)||(21088-21224)
[»] scaffold0135 (1 HSPs)
scaffold0135 (188-320)||(32794-32924)
[»] scaffold0192 (1 HSPs)
scaffold0192 (168-237)||(25657-25726)
[»] scaffold0444 (1 HSPs)
scaffold0444 (144-265)||(831-952)
[»] scaffold0002 (1 HSPs)
scaffold0002 (157-320)||(96248-96411)
[»] scaffold0063 (1 HSPs)
scaffold0063 (155-265)||(51366-51476)
[»] scaffold0025 (1 HSPs)
scaffold0025 (199-320)||(11400-11521)


Alignment Details
Target: chr4 (Bit Score: 429; Significance: 0; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 429; E-Value: 0
Query Start/End: Original strand, 1 - 488
Target Start/End: Complemental strand, 48731501 - 48731013
Alignment:
Q  1 aaacgttttatgttttagtggaattggaaaatggaataattattaaaggaattaaggaaatgaagactcttatgctactaagtgaaattcctacttccta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  48731501 aaacgttttatgttttagtggaattggaaaatggaataattattaaaggaattaaggaaatgaagactcttaagctactaagtgaaattcctactcccta 48731402  T
Q  101 gatggtggaacggatggataaaaagaaaaggagaaatgtaacgatatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaact 200  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||| ||||||||||||||||||||||| ||    
T  48731401 gatggtggaacggatggataaaaagaaaaggagaaatgtaacgacatcgagccatcttatgaaccaaatgaattgaactatctataattcaagtacagct 48731302  T
Q  201 catttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatatt 300  Q
    |||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  48731301 catttaattaacgaacttaatttttagctcaagttcagtttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatttcgaactatatt 48731202  T
Q  301 cgagttggttcggttcattggcag-cctacggatggccctaaatcacacccatcattaacctcttctaatagtttacaataacttacttgccattcccaa 399  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48731201 cgagttggttcggttcattggcagccctacggatggccctaaatcacacccatcattaacctcttctaatagtttacaataacttacttgccattcccaa 48731102  T
Q  400 taagctttttctattagaaacaacaaagcttctgcaagagccaaggaataaaaggtatatagagcagatcgacagttcctcttaccggt 488  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48731101 taagctttttctatcagaaacgacaaagcttctgcaagagccaaggaataaaaggtatatagagcagatcgacagttcctcttaccggt 48731013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 36543738 - 36543918
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||||||||||||| ||| |||||||| ||||||| ||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||    
T  36543738 atcgagtcatctcatgaacctaacaaatcgaaccatctatagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggcttattt 36543837  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||| |||||    
T  36543838 ggttcatgaaccaagttcaatggaccaattgtcgagtcgaattacgaactatattcgagttggttcagttcattgtcagcc 36543918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 9469734 - 9469914
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||||||||||||| |||||||||||| ||||||| ||||||| || |||||||||| |||||||||||||||||||||||||| |||| ||||    
T  9469734 atcgagtcatctcatgaacctaacgaatcgaaccatctatagttcaagttcagctcatttaatcaacgaacttaattttcagctcaagtttggctcattt 9469833  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||    
T  9469834 ggttcatgaaccaagttcaatagaccaattgtcgagtcgaattacgaactatattcgagttggttcggttcattgtcagcc 9469914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 329 - 469
Target Start/End: Complemental strand, 48739220 - 48739078
Alignment:
Q  329 cggatggccctaaatcacacccatcattaacctcttctaatagtttacaataacttacttgccattcccaataagctttttctattagaaacaac--aaa 426  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||  |||    
T  48739220 cggatggccctaaatcacacccatcattaacctcttcttatagtttacaatagcttacttgtcattcccaataagctttttctatcagaaacaacataaa 48739121  T
Q  427 gcttctgcaagagccaaggaataaaaggtatatagagcagatc 469  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  48739120 gcttctgcaagagccaaggaataaaagatatatagagcagatc 48739078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 53369829 - 53370009
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  53369829 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 53369928  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||| |||  || | |||||| |||| | |||||||| ||||||||||||||||||||| |||||    
T  53369929 ggttcatgaaccaagttcaacggattaaatatcgagttgaatgtcgaactataatcgagttggttcggttcattgccagcc 53370009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 146 - 320
Target Start/End: Original strand, 21441538 - 21441712
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  21441538 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 21441637  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||||||||||||| ||||| |||  |  | ||||||||||| | |||||||| |||||||||||||||||||||    
T  21441638 ggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 21441712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 160 - 320
Target Start/End: Complemental strand, 36156463 - 36156303
Alignment:
Q  160 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||||||||||| ||||||||  |||| ||||||| || |||| ||| || |||||||||||||||||||||||||||||| |||||||||| |||||||    
T  36156463 tgaaccaaacgagtcgaactacatatagttcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcaagaaccaa 36156364  T
Q  260 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
     ||||| | | |||||||||| |||||||  ||||| || |||||||||||||||||||||    
T  36156363 gttcaacgaatcaattgtcgaatcgaattacgaactttaatcgagttggttcggttcattg 36156303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 45674792 - 45674972
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| |||||||||||||||||||| |||||||||||||||||| | |||  ||     
T  45674792 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcaactcatttaattaacgaatttaattttcagctcaagtccagctcgtta 45674891  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||| | |||  |  | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  45674892 ggttcatgaaccaagttcgacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 45674972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 56224102 - 56224282
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||  | ||||||||||| ||||||| ||| |||| ||||||| ||||| |||||||||||||| |||||||||||||||||||||||| ||||    
T  56224102 atcgagccaatttatgaaccaaacaaatcgaattatatatagttcaagttcaacttatttaattaacgaatttaattttcagctcaagttcggctcattt 56224201  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||| || |||||| ||||| | |  |||||| ||||| | ||| ||||||| || ||||||||||||||||||| |||||    
T  56224202 ggtttattaaccaagttcaacgaattaattgttgagtcaagtttcgaactatgtttgagttggttcggttcattgtcagcc 56224282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 19852935 - 19853115
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| |  ||  ||     
T  19852935 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccatctcgtta 19853034  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||| |||  || | ||||||||||| |  ||||||| ||||||||||||| ||||||| |||||    
T  19853035 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcaaactataatcgagttggttcgattcattgacagcc 19853115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 50605965 - 50606145
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    ||||||||||||||| |||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  50605965 atcgagccatctcataaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 50606064  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||| |||  |  | ||||||||||| | |||||||| |||| |||||||||||||||| |||||    
T  50606065 ggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgaattggttcggttcattgccagcc 50606145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 156 - 326
Target Start/End: Complemental strand, 15697256 - 15697086
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    |||||||||||||||| ||| ||||| | || |||| || || |||||| | ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  15697256 ctcatgaaccaaacgagtcggactatgtttagttcatgttcagctcattaagttaacgaacttaatttttagctcaagttcagcttatttggttcatgaa 15697157  T
Q  256 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
     ||| ||||| | | ||||||||||||||| | | ||||| |||||||||||  ||||||||||| |||||    
T  15697156 tcaagttcaacgaatcaattgtcgagtcgagtctcgaactttattcgagttgtctcggttcattgtcagcc 15697086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 157 - 320
Target Start/End: Original strand, 40797798 - 40797961
Alignment:
Q  157 tcatgaaccaaacgaatcgaactat-ctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    ||||||||||||||| |||||| || ||| | ||||||| ||||||||||| ||||||| ||||||||||| |||||||||| || ||||||||||||||    
T  40797798 tcatgaaccaaacgagtcgaaccatacta-agttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaa 40797896  T
Q  256 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||| ||||||| ||||||| |||| || | | | ||||||| || |||||||||||||||||||    
T  40797897 ccaagttcaatgaaccaattatcgaatcaagtatcgaactatttttgagttggttcggttcattg 40797961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 146 - 320
Target Start/End: Complemental strand, 50147101 - 50146927
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| |||||| ||||||||||||  |||||||  ||||| | |||| || |||| ||| || |||||||||||||||||||||||| ||| | ||||    
T  50147101 atcgagtcatctcgtgaaccaaacgagccgaactacatataacttaagttcagctcaattagttcacgaacttaattttcagctcaagtccggttcattt 50147002  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||||||||||||| ||||| | | |||||||||| |||||||  ||||| || |||| ||||||||||||||||    
T  50147001 ggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacgaactttaatcgaattggttcggttcattg 50146927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 145 - 326
Target Start/End: Complemental strand, 11055410 - 11055229
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    ||||||| || |||||||||||| ||| ||||||||| || |  |||||| |  |||||||| |||||||||||||||||| |||||||||| ||| |||    
T  11055410 tatcgagtcagctcatgaaccaatcgagtcgaactatatacagctcaagttcggctcatttatttaacgaacttaattttccgctcaagttcagctcatt 11055311  T
Q  245 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||||||||||| |||||||    |||| |||| |||| ||  |||||||  ||||||||||||||||||||| |||||    
T  11055310 tggttcatgaaccaagttcaatgagttaattatcgaatcgagttccgaactattgtcgagttggttcggttcattgtcagcc 11055229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 48977533 - 48977713
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    ||||||| |||||||||||| ||||| ||||||||| | ||  |||||| || ||||||||||||||||| ||||||||||||||| || | ||| |||     
T  48977533 atcgagctatctcatgaaccgaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaatttaattttcagctcatgtccagctcatta 48977632  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||||||| || ||||| | |  || | ||||||||||| | ||| |||| ||||||||||||||||||||| |||||    
T  48977633 ggttcatgaacgaagttcaacgaattaaatatcgagtcgaatgtcgaattataatcgagttggttcggttcattgccagcc 48977713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 146 - 316
Target Start/End: Complemental strand, 44791426 - 44791256
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||||||||||||| ||||| ||||||||| | ||  |||| | || ||||||||||||||||||||||||||||| |||||| | |||  ||     
T  44791426 atcgagtcatctcatgaacctaacgagtcgaactatatgtagctcaaattcagctcatttaattaacgaacttaattttcagttcaagtgcagctcgtta 44791327  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttc 316  Q
    |||||||||||||| ||||| |||  |  | ||||||||||| | |||||||| |||||||||||||||||    
T  44791326 ggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttc 44791256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 177 - 326
Target Start/End: Original strand, 7505517 - 7505666
Alignment:
Q  177 actatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattg 276  Q
    ||||| ||||| |||||| ||||||||||| |||||||| |||||||| ||||||||||||||| |||||||||||||| ||| ||||| | || ||||     
T  7505517 actatatataactcaagttcaactcatttagttaacgaatttaatttttagctcaagttcggctcatttggttcatgaatcaagttcaacgaactaatta 7505616  T
Q  277 tcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
     |||||| | || |||||| |||||||||||  ||||||||||| |||||    
T  7505617 ccgagtcaagttctgaactttattcgagttgtatcggttcattgtcagcc 7505666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 189 - 326
Target Start/End: Complemental strand, 12789692 - 12789555
Alignment:
Q  189 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 288  Q
    |||||| || |||||||||||||||||||||||||||||||||||||| |||  || ||||||| |||||| ||||| |||  |  | |||||||||||     
T  12789692 tcaagttcagctcatttaattaacgaacttaattttcagctcaagttcagctcgttaggttcataaaccaagttcaacggattagatatcgagtcgaatg 12789593  T
Q  289 ttgaactatattcgagttggttcggttcattggcagcc 326  Q
    | |||||||| ||||||||||||||||||||| |||||    
T  12789592 tcgaactataatcgagttggttcggttcattgccagcc 12789555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 157 - 326
Target Start/End: Original strand, 22721296 - 22721464
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| ||||||||| ||||| |||||| ||||||||||| ||||||||||||||||| |||| ||||| | ||  ||||||||||||||    
T  22721296 tcatgaaccaaacgagtcgaactatatataactcaagttcaactcatttatttaacgaacttaatttt-agcttaagtttgcctcgtttggttcatgaac 22721394  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||| ||||||| || ||||  ||| |||| ||  ||||| |||||||||||  ||| ||||||| |||||    
T  22721395 caagttcaatgaactaattaccgaatcgagttccgaactttattcgagttgtctcgattcattgccagcc 22721464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 188 - 320
Target Start/End: Original strand, 51995077 - 51995209
Alignment:
Q  188 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 287  Q
    ||||||| |||||| |||| ||||| ||||||||||| ||||||||||||||| |||||||||||||||||| ||||| | |  |||| |||| |||| |    
T  51995077 ttcaagttcaactcgtttatttaacaaacttaattttgagctcaagttcggctcatttggttcatgaaccaagttcaacgaattaattatcgaatcgagt 51995176  T
Q  288 tttgaactatattcgagttggttcggttcattg 320  Q
     | ||||||| ||||||||||||||||||||||    
T  51995177 ctcgaactattttcgagttggttcggttcattg 51995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 157 - 320
Target Start/End: Complemental strand, 12673200 - 12673037
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| |||||| ||    || |||||| | ||||||||| |||| || ||||||||||| |||||||||| || |||||||||||||||    
T  12673200 tcatgaaccaaacgagtcgaaccatactcaactcaagttcgactcatttatttaatgagcttaattttcaactcaagttcgactcatttggttcatgaac 12673101  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    ||| ||||| |   ||||| |||| |||||| | ||||||| ||||||||||||||||||||||    
T  12673100 caagttcaacgagtcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattg 12673037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 145 - 320
Target Start/End: Original strand, 26632892 - 26633067
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    |||||||||| ||||||||||||   | ||| ||||| | |||||||||| |  |||||||| ||||||||||||||||||||||||||||| ||| |||    
T  26632892 tatcgagccaactcatgaaccaactaagtcggactatatgtaattcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatt 26632991  T
Q  245 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    ||||| |||| |||| ||||| |    ||||||||| |||| ||  |||||||  |||||||||||||||||||||    
T  26632992 tggttaatgagccaagttcaacgagttaattgtcgaatcgagttacgaactattatcgagttggttcggttcattg 26633067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 146 - 320
Target Start/End: Complemental strand, 32397881 - 32397707
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| |||||| |||| ||||||| |||| |||  |||| ||||||| || |||| ||| || |||||||||||||| || |||||||||||||||||    
T  32397881 atcgagtcatctcgtgaatcaaacgagtcgagctacatatagttcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggcttattt 32397782  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    | |||||||||||| |||   | | ||||||||||||||||||  ||||| || |||| ||||||||||| ||||    
T  32397781 gattcatgaaccaagttcggcgaatcaattgtcgagtcgaattacgaactttaatcgaattggttcggtttattg 32397707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 160 - 326
Target Start/End: Original strand, 52706188 - 52706354
Alignment:
Q  160 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||| ||||||| ||||||||| ||||| |||||| ||||||||||| |||||||||||||| || |||||||||||||||  |||||||||||||||||    
T  52706188 tgaatcaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaa 52706287  T
Q  260 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
     || || | || ||||  |||||| | ||  ||| | |||||||||||  ||||||||||| |||||    
T  52706288 gtttaacgaactaattaccgagtcaagttccgaattttattcgagttgtatcggttcattgccagcc 52706354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 157 - 326
Target Start/End: Original strand, 80465 - 80634
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| ||||| |||   || ||||||| |  |||||||| || |||| ||||||||||| |||||||||| || |||||||||||||||    
T  80465 tcatgaaccaaacgagtcgaattatacgtagttcaagttcggctcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaac 80564  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||| ||||| | | |||||  ||| || ||||| ||||||| |||||||||| ||||||||||| |||||    
T  80565 caagttcaacgaaacaattaccgaatcaaatttcgaactattttcgagttggatcggttcattgccagcc 80634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 145 - 326
Target Start/End: Original strand, 22184459 - 22184640
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    |||||||||| || |||||||||  || ||||||||| || | ||||||| || |||||||  ||||||||||||||||||||||||||||| |||  ||    
T  22184459 tatcgagccaacttatgaaccaactgagtcgaactatataaagttcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtt 22184558  T
Q  245 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||||||||||| ||||| |    ||||||||| |||| |    ||||||  ||||||||||||||||||||| |||||    
T  22184559 tggttcatgaaccaagttcaacgagttaattgtcgaatcgagtcccaaactattgtcgagttggttcggttcattgccagcc 22184640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 157 - 326
Target Start/End: Complemental strand, 46944716 - 46944547
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| |||||| ||    || |||||| | ||| ||||| ||||||| ||||| ||||| |||||||||| || |||||||||||||||    
T  46944716 tcatgaaccaaacgagtcgaaccatactcaactcaagttcgacttatttatttaacgagcttaaatttcaactcaagttcgactcatttggttcatgaac 46944617  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||| ||||| |  |||||| |||| |||||| | ||||||| || ||||||||||||||||||| |||||    
T  46944616 caagttcaacgagccaattatcgaatcgaatctcgaactatttttgagttggttcggttcattgtcagcc 46944547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 49820939 - 49821058
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || ||||||||||||||||||||||||||||||| |||| | |||  ||     
T  49820939 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgtta 49821038  T
Q  246 ggttcatgaaccaaattcaa 265  Q
    |||||||||||||| |||||    
T  49821039 ggttcatgaaccaagttcaa 49821058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 52813558 - 52813677
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    ||||||||| |||||||||||| ||||||||||||| || |  |||||| || |||||||  |||||||||||||||||||||| |||||| |||  |||    
T  52813558 atcgagccaactcatgaaccaaccgaatcgaactatataaagctcaagttcagctcatttgtttaacgaacttaattttcagcttaagttcagctcgttt 52813657  T
Q  246 ggttcatgaaccaaattcaa 265  Q
    |||||||||||||| |||||    
T  52813658 ggttcatgaaccaagttcaa 52813677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 145 - 326
Target Start/End: Complemental strand, 48339283 - 48339102
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    |||||||  ||||| |||||||||||| ||||||||  ||||  | |||| || |||| ||| || ||||||||||||||||||||||||||| || |||    
T  48339283 tatcgagttatctcgtgaaccaaacgagtcgaactacatatagcttaagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatt 48339184  T
Q  245 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    || |||||||||||| |||||   | || ||||||| |||||||  ||||| || | ||||||||||| ||||||| |||||    
T  48339183 tgattcatgaaccaagttcaacaaatcagttgtcgaatcgaattacgaactctaattgagttggttcgattcattgtcagcc 48339102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 146 - 234
Target Start/End: Original strand, 53369645 - 53369733
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagt 234  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || ||||||||||||||||||||||||||||||||||||    
T  53369645 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagt 53369733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 157 - 259
Target Start/End: Original strand, 25134542 - 25134644
Alignment:
Q  157 tcatgaaccaaacgaatcgaactat-ctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    ||||||||||||||| |||||| || ||| | ||||||| ||||||||||| ||||||||||||||||||| |||||||||| || ||||||||||||||    
T  25134542 tcatgaaccaaacgagtcgaaccatacta-agttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaa 25134640  T
Q  256 ccaa 259  Q
    ||||    
T  25134641 ccaa 25134644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 173 - 320
Target Start/End: Complemental strand, 49083390 - 49083243
Alignment:
Q  173 tcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggacca 272  Q
    |||| |||| ||||| ||||||||| ||||||||||||||||| ||||||||||| ||||||||  || ||| |||| ||||||||| |||||  ||| |    
T  49083390 tcgagctatatataactcaagtacagctcatttaattaacgaatttaattttcagatcaagttcaactcattaggtttatgaaccaagttcaacagacta 49083291  T
Q  273 attgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    ||| ||||||| |||||  ||||||  || |||||||||| |||||||    
T  49083290 attatcgagtccaatttcaaactattctcaagttggttcgattcattg 49083243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 155 - 326
Target Start/End: Complemental strand, 49405809 - 49405638
Alignment:
Q  155 tctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatga 254  Q
    |||| |||| ||||||| |||||||||| |||| |||||| |  |||||||| || |||| ||||||||||   ||||||||| || ||||||||||| |    
T  49405809 tctcgtgaatcaaacgagtcgaactatccataactcaagttcggctcatttatttgacgagcttaattttcgattcaagttcgactcatttggttcataa 49405710  T
Q  255 accaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||| ||||| | | |||||  ||| |||| ||| ||||||| |||| ||||||||||||||||| |||||    
T  49405709 accaagttcaacgaatcaattaccgaatcgagtttcgaactattttcgggttggttcggttcattgtcagcc 49405638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 188 - 320
Target Start/End: Complemental strand, 9222271 - 9222141
Alignment:
Q  188 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 287  Q
    ||||||| ||| ||||||| ||||||| |||||||| || |||||||||| || |||||||   |||||||| ||||| | |||||||||||| |||| |    
T  9222271 ttcaagttcaattcatttatttaacgagcttaatttacaactcaagttcgactcatttggtg--tgaaccaagttcaacgaaccaattgtcgaatcgagt 9222174  T
Q  288 tttgaactatattcgagttggttcggttcattg 320  Q
     | ||||||| ||||||||||||||||||||||    
T  9222173 atcgaactattttcgagttggttcggttcattg 9222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 146 - 326
Target Start/End: Complemental strand, 19455341 - 19455161
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    ||||||||| ||  |||||||||| | ||||||| | ||||  |||||| |||||||||||  |||| ||||||||||||| ||||||||| ||| ||||    
T  19455341 atcgagccaacttgtgaaccaaacaagtcgaactgtatatagctcaagttcaactcatttagataacaaacttaattttcaactcaagttcagctcattt 19455242  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    | |||||||||||| ||||| | |  ||||||| | |||| ||| ||||||| ||||| |  | ||||||||||| |||||    
T  19455241 gattcatgaaccaagttcaacgaattaattgtcaaatcgagtttcgaactattttcgaataagctcggttcattgtcagcc 19455161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 312
Target Start/End: Complemental strand, 48151298 - 48151143
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||| |||||  |||||| || || |||||| | ||| ||||| ||||||||||||||||||||||||||||| ||| ||||||||  |||||    
T  48151298 tcatgaaccaaccgaattaaactatatacaactcaagttcgacttatttatttaacgaacttaattttcagctcaagttcagctcatttggtttgtgaac 48151199  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcg 312  Q
    ||| |||||      ||||||||| |||| ||| |||||||  |||||||||||||    
T  48151198 caagttcaacaagataattgtcgaatcgagtttcgaactattgtcgagttggttcg 48151143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 156 - 326
Target Start/End: Original strand, 27891354 - 27891523
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    |||||||||||| ||| ||||||||| || ||||||| | || |||||||| ||||| || || ||||||||||||||||| ||| |||| |||||||||    
T  27891354 ctcatgaaccaaccgagtcgaactatataaaattcaaattcagctcatttatttaacaaatttgattttcagctcaagttcagctcattt-gttcatgaa 27891452  T
Q  256 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||| ||||| |    ||||||||| |||| ||  |||||||  |||||||| |||| ||||||| |||||    
T  27891453 ccaagttcaacgagttaattgtcgaatcgagttccgaactattgtcgagttgattcgattcattgtcagcc 27891523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 157 - 326
Target Start/End: Complemental strand, 24008075 - 24007906
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| |||||| || | ||  |||||| ||||||||||| ||||||||||||||||| | ||||||||   ||  || |||||||||||    
T  24008075 tcatgaaccaaacgagtcgaaccatatttagctcaagttcaactcatttatttaacgaacttaattttaaactcaagtttaactcgttaggttcatgaac 24007976  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||| ||||| | | ||||  || | |||||| | ||||||| |||||||||||||  ||||||| |||||    
T  24007975 caagttcaacgaatcaatcatcaaatcgaatctcgaactattttcgagttggttcaattcattgtcagcc 24007906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 146 - 285
Target Start/End: Complemental strand, 43812240 - 43812101
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| |||||| ||||| |||||| ||||||||  | || ||||||| || |||| ||| || ||||||||||||||||| | |||||||||  ||||    
T  43812240 atcgagtcatctcgtgaactaaacgagtcgaactacatctagttcaagttcagctcaattagtttacgaacttaattttcagtttaagttcggcccattt 43812141  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcga 285  Q
    |||||||||||||| ||| | | | |||||||||| ||||    
T  43812140 ggttcatgaaccaagttcgacgaatcaattgtcgaatcga 43812101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 6866243 - 6866173
Alignment:
Q  189 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||||| || |||| ||| || |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6866243 tcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaa 6866173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 16742509 - 16742423
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctca 231  Q
    ||||||| || |||||||||||| ||||||||||||| || || |||||| || |||||||| ||||||||||||||||||| ||||    
T  16742509 tatcgagtcagctcatgaaccaatcgaatcgaactatatacaactcaagttcagctcatttatttaacgaacttaattttcaactca 16742423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 49376866 - 49376773
Alignment:
Q  234 ttcggcttatttggttcatg-aaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||| |||| ||||||| || ||| ||||||||||||||||||||||| ||||  ||||||||||||| |||||||||||| ||| |||||    
T  49376866 ttcggctcatttagttcatggaatcaagttcaatggaccaattgtcgagtcaaattacgaactatattcgatttggttcggttcgttgtcagcc 49376773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 1803468 - 1803564
Alignment:
Q  159 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    ||||||||||||| |||||| || | || ||||||| ||||||||||| ||||||| ||||||||| | |||||||||| || ||| ||||||||||    
T  1803468 atgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaa 1803564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 38493147 - 38493075
Alignment:
Q  159 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctca 231  Q
    ||||||||||||| || || ||| ||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  38493147 atgaaccaaacgagtcaaattatatataactcaagttcaactcatttaattaacaaacttaattttcagctca 38493075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 188 - 326
Target Start/End: Original strand, 13455700 - 13455838
Alignment:
Q  188 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 287  Q
    ||||||| |||||| |||| ||||||||||||||||| |||||||||| | || ||||||||||| || ||| ||||| | |  |||| |||| ||||||    
T  13455700 ttcaagttcaactcgtttatttaacgaacttaattttgagctcaagttggactcatttggttcataaatcaagttcaacgaattaattatcgaatcgaat 13455799  T
Q  288 tttgaactatattcgagttggttcggttcattggcagcc 326  Q
     |  || ||| ||| ||||||||||||| |||| |||||    
T  13455800 ctcaaattattttcaagttggttcggtttattgtcagcc 13455838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 155 - 326
Target Start/End: Complemental strand, 48802650 - 48802478
Alignment:
Q  155 tctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatga 254  Q
    |||| |||||||||||| |||||||||  |||  |||||| |  |||||||| || |||| ||||||||||  |||||||||| || |||||||||||||    
T  48802650 tctcgtgaaccaaacgagtcgaactattcatagctcaagttcggctcatttatttgacgagcttaattttcgactcaagttcgactcatttggttcatga 48802551  T
Q  255 accaaattc-aatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    | ||| ||| ||   | ||||   | | |||| ||| ||||||| |||||||||||||||||||||| |||||    
T  48802550 atcaagttcaaaaaaatcaataaccaaatcgagtttcgaactattttcgagttggttcggttcattgtcagcc 48802478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 24550049 - 24550124
Alignment:
Q  161 gaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttc 236  Q
    ||||||||||| |||| ||||  |||| |||||| ||||||||||| ||||| ||||||||||| |||||||||||    
T  24550049 gaaccaaacgagtcgagctatacataactcaagttcaactcatttagttaacaaacttaatttttagctcaagttc 24550124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 188 - 326
Target Start/End: Complemental strand, 51408090 - 51407952
Alignment:
Q  188 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 287  Q
    ||||||| ||||||||||  || |||||||||||||| | | || ||||| || |||||||||||||||||| || || | |  ||||  ||| |||| |    
T  51408090 ttcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcatttggttcatgaaccaagttgaacgaattaattaccgaatcgagt 51407991  T
Q  288 tttgaactatattcgagttggttcggttcattggcagcc 326  Q
     | ||||||| ||||||||||||| |||||||| |||||    
T  51407990 ctcgaactattttcgagttggttcagttcattgtcagcc 51407952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 25608750 - 25608823
Alignment:
Q  159 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaa 232  Q
    ||||| ||||| ||||||| ||| |||||||||||| |||   |||||||||| ||||||||||||||||||||    
T  25608750 atgaaacaaacaaatcgaattatatataattcaagttcaatctatttaattaatgaacttaattttcagctcaa 25608823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 265
Target Start/End: Original strand, 44378205 - 44378326
Alignment:
Q  144 atatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttat 243  Q
    ||||||||| |  |||||||||| |||| ||||| |||   ||  |||||| ||||||||||| ||||||| ||||||||||| | ||| |||  || ||    
T  44378205 atatcgagctagttcatgaaccagacgagtcgaattatacttagctcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcat 44378304  T
Q  244 ttggttcatgaaccaaattcaa 265  Q
    |||||||||||||||| |||||    
T  44378305 ttggttcatgaaccaagttcaa 44378326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 265
Target Start/End: Complemental strand, 52733853 - 52733765
Alignment:
Q  176 aactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaa 265  Q
    |||||| || |||| |||| ||||| ||||| ||||||||||||||||||||||||| |||  || ||||||||||||||  ||||||||    
T  52733853 aactatatacaatttaagttcaacttatttatttaacgaacttaattttcagctcaa-ttcaactcatttggttcatgaattaaattcaa 52733765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 157 - 326
Target Start/End: Complemental strand, 55892157 - 55891988
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||||| |||||||   |   |||||| ||||||||||  || |||||||||||||| | | || ||||| ||  ||||||||||||||    
T  55892157 tcatgaaccaaacgaattgaactatacttggctcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcgtttggttcatgaac 55892058  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||| ||||| | |  ||||  ||| |||| | | ||||||| || |||||||||| |||||||| |||||    
T  55892057 caagttcaacgaattaattaccgaatcgagtctcgaactatttttgagttggttcagttcattgtcagcc 55891988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 4274665 - 4274565
Alignment:
Q  220 attttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 319  Q
    ||||| ||||||||||||||| ||||| |||||||| ||  ||||| |    ||||||||| || | ||| ||||||| |||||||||||||||||||||    
T  4274665 atttttagctcaagttcggctcatttgtttcatgaatcaggttcaacgagataattgtcgaatcaagtttcgaactattttcgagttggttcggttcatt 4274566  T
Q  320 g 320  Q
    |    
T  4274565 g 4274565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 317
Target Start/End: Complemental strand, 34980636 - 34980516
Alignment:
Q  197 aactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaacta 296  Q
    |||||||||| ||| |||  |||||||||| ||||||||||  | ||||| |||||||| ||| ||||||| | ||||| |||| |||| | |  |||||    
T  34980636 aactcatttatttagcgagtttaattttcaactcaagttcgattcatttgattcatgaatcaagttcaatgaatcaattatcgaatcgagtctcaaacta 34980537  T
Q  297 tattcgagttggttcggttca 317  Q
    | |||||||||||| ||||||    
T  34980536 ttttcgagttggtttggttca 34980516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 43387224 - 43387308
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagct 229  Q
    |||||||||| |||||||||||| ||| ||||||||| || | ||||||| || |||||||  |||||| | |||||||||||||    
T  43387224 tatcgagccaactcatgaaccaaccgagtcgaactatataaagttcaagttcagctcatttgtttaacggatttaattttcagct 43387308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 5764702 - 5764643
Alignment:
Q  200 tcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    ||||||| |||||||| ||||||||||||||||  ||  |||||||||||||||||||||    
T  5764702 tcatttatttaacgaatttaattttcagctcaaactcaacttatttggttcatgaaccaa 5764643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 5766946 - 5766887
Alignment:
Q  200 tcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    ||||||| |||||||| ||||||||||||||||  ||  |||||||||||||||||||||    
T  5766946 tcatttatttaacgaatttaattttcagctcaaactcaacttatttggttcatgaaccaa 5766887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 34718152 - 34718215
Alignment:
Q  202 atttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaa 265  Q
    ||||| |||||||| ||||||||||||| ||||||| || |||| |||||| ||||||||||||    
T  34718152 atttatttaacgaaattaattttcagctgaagttcgactcatttagttcataaaccaaattcaa 34718215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 197 - 320
Target Start/End: Original strand, 39736691 - 39736814
Alignment:
Q  197 aactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaacta 296  Q
    ||||| |||| ||||| ||||||||||| |  ||||||||| |||||||||| | |||||||||||||| | | ||||| |||| |||| | |  |||||    
T  39736691 aactcgtttatttaacaaacttaatttttaattcaagttcgacttatttggtccgtgaaccaaattcaacgaatcaattatcgaatcgagtctcaaacta 39736790  T
Q  297 tattcgagttggttcggttcattg 320  Q
    | ||||||||| ||| ||| ||||    
T  39736791 ttttcgagttgattcagtttattg 39736814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 13761824 - 13761869
Alignment:
Q  214 aacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    ||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  13761824 aacttaattttcagctcaaattcagctcatttggttcatgaaccaa 13761869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 156 - 257
Target Start/End: Complemental strand, 43798396 - 43798295
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    |||||||||||||||| |||||||||  |||  |||||| ||||||||||| |||| || ||| |||||   |||||| ||| || |||||||||| |||    
T  43798396 ctcatgaaccaaacgagtcgaactatacatagctcaagttcaactcatttatttaatgatcttcattttttactcaagctcgactcatttggttcaagaa 43798297  T
Q  256 cc 257  Q
    ||    
T  43798296 cc 43798295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 171 - 320
Target Start/End: Complemental strand, 49059948 - 49059799
Alignment:
Q  171 aatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggac 270  Q
    |||| |||||| ||| |||||||| ||  ||| ||| |||| ||||||||||||||||| || |||  |||||||||||||||||  ||||| |||| |     
T  49059948 aatcaaactatatatgattcaagttcagttcacttagttaatgaacttaattttcagctaaaattcaacttatttggttcatgaattaaatttaatgaat 49059849  T
Q  271 caattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
     |||| || | || |||| |||| | |||||||||||  | |||||||||    
T  49059848 taattatcaaatcaaattctgaattttattcgagttgactaggttcattg 49059799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 25102730 - 25102666
Alignment:
Q  196 caactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaa 260  Q
    ||||||||||| ||||| |  ||||| |||| ||||| ||||||| |||||||||||||||||||    
T  25102730 caactcatttatttaacaagtttaatgttcaactcaatttcggctcatttggttcatgaaccaaa 25102666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 50710908 - 50710840
Alignment:
Q  191 aagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||| ||||| ||||| ||||||| ||||||||||| ||||| |||| || ||||| ||||||||||||    
T  50710908 aagttcaacttatttatttaacgagcttaattttcaactcaatttcgactcatttgattcatgaaccaa 50710840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 41822079 - 41822153
Alignment:
Q  159 atgaaccaaacgaatcgaac--tatctataattcaagtacaactcatttaattaacgaacttaattttcagctca 231  Q
    ||||||||||||||||||||  ||| |||| || |||| || |||||||| ||||| ||||||||||||| ||||    
T  41822079 atgaaccaaacgaatcgaactatatatatagtttaagttcagctcatttagttaacaaacttaattttcaactca 41822153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 5762673 - 5762615
Alignment:
Q  201 catttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||||| |||||||| ||||||||||||||||  ||  || ||||||||||||||||||    
T  5762673 catttatttaacgaatttaattttcagctcaaactcaactcatttggttcatgaaccaa 5762615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 5769243 - 5769185
Alignment:
Q  201 catttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||||| |||||||| |||||||||||||||| |||  |  ||||||||||||||||||    
T  5769243 catttatttaacgaatttaattttcagctcaaattcaacccatttggttcatgaaccaa 5769185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 326
Target Start/End: Original strand, 38791728 - 38791828
Alignment:
Q  225 cagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcag 324  Q
    |||||||||||| ||| |||||||||||||||||| ||||| |    ||||||||| | | |||   ||||||  ||||||||||||||||||||| |||    
T  38791728 cagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcgaattg-attccaaactattgtcgagttggttcggttcattgccag 38791826  T
Q  325 cc 326  Q
    ||    
T  38791827 cc 38791828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 41857213 - 41857160
Alignment:
Q  208 ttaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaat 261  Q
    ||||| |||||||| ||||||| |||||| | | ||||||||||||||||||||    
T  41857213 ttaacaaacttaatcttcagcttaagttcagttcatttggttcatgaaccaaat 41857160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 27285594 - 27285678
Alignment:
Q  147 tcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctca 231  Q
    |||| ||| |||| ||| |||| || ||||||||| ||||  ||||||  |||||||||||||||| |||| |||||||| ||||    
T  27285594 tcgaaccaactcacgaatcaaatgagtcgaactatatatagctcaagtttaactcatttaattaacaaactaaattttcaactca 27285678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 6e-72; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 153 - 326
Target Start/End: Complemental strand, 46293389 - 46293216
Alignment:
Q  153 catctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 252  Q
    ||||||||||||||||||||||||||||| |||| || |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  46293389 catctcatgaaccaaacgaatcgaactatttatagtttaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcat 46293290  T
Q  253 gaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||    
T  46293289 gaaccaaattcaattgaccaattgtcaagtcgaattttgaactatattcgagttgattcggttcattgtcagcc 46293216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 39135311 - 39135491
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||||||||||||| |||||||||||| ||||||| || |||| || |||||||||||||||||||||||||||||||||||||||||| ||||    
T  39135311 atcgagtcatctcatgaacctaacgaatcgaaccatctatagtttaagttcagctcatttaattaacgaacttaattttcagctcaagttcggctcattt 39135410  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||    
T  39135411 ggttcatgaaccaagttcaatgaaccaattgtcgagtcgaattatgaactatattcgagttggttcggtttattgccagcc 39135491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 153 - 319
Target Start/End: Complemental strand, 39469707 - 39469541
Alignment:
Q  153 catctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 252  Q
    ||||||||||||| |||||||||||| |||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  39469707 catctcatgaacctaacgaatcgaacaatctataattcaagtttagctcatttaattaacgaacttaattttcagctcaagttcggctcatttgattcat 39469608  T
Q  253 gaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 319  Q
    ||||||| ||||||||||||||| |||| |||||||  ||||||||||||||||||||| |||||||    
T  39469607 gaaccaagttcaatggaccaattatcgaatcgaattacgaactatattcgagttggttcagttcatt 39469541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 146 - 326
Target Start/End: Complemental strand, 54393626 - 54393446
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| |||||| |||||||||||| ||||||||  |||| ||||||| |  |||| ||| || |||||||||||||||||||||||||||||| ||||    
T  54393626 atcgagtcatctcgtgaaccaaacgagtcgaactacatatagttcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcattt 54393527  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||| ||||||||| ||||| | | |||||||||| |||||||  ||||| || ||||||||||||||||||||| |||||    
T  54393526 ggtttatgaaccaagttcaacgaatcaattgtcgaatcgaattacgaactttaatcgagttggttcggttcattgccagcc 54393446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 145 - 326
Target Start/End: Complemental strand, 9505305 - 9505124
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    |||||||||| |||||||||||| |||| |||||||| ||||  |||||| || |||||||| |||||||||||||||||||||||||||||  || |||    
T  9505305 tatcgagccagctcatgaaccaaccgaaccgaactatatatatctcaagttcagctcatttatttaacgaacttaattttcagctcaagttcaactcatt 9505206  T
Q  245 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||||||||||| ||||| |    ||||||||| |||| ||  |||||||  ||||||||||||||||||||| |||||    
T  9505205 tggttcatgaaccaagttcaacgagttaattgtcgaatcgagttccgaactattgtcgagttggttcggttcattgccagcc 9505124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 39135024 - 39135171
Alignment:
Q  1 aaacgttttatgttttagtggaattggaaaatggaataattattaaaggaattaaggaaatgaagactcttat---gctact-aagtgaaattcctactt 96  Q
    |||||||||||||||| ||||||||| ||||||||||||| ||||||||| ||||| |||||||| ||||| |   |||| | |||||||||||||||||    
T  39135024 aaacgttttatgttttggtggaattgaaaaatggaataatgattaaaggagttaagcaaatgaaggctcttcttaggctaattaagtgaaattcctactt 39135123  T
Q  97 cctagatggtggaacggatggataaaaagaaaaggagaaatgtaacga 144  Q
    ||||||| ||||||||||||| |||||| ||||||||| |||||||||    
T  39135124 cctagatagtggaacggatgggtaaaaataaaaggagatatgtaacga 39135171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 146 - 320
Target Start/End: Complemental strand, 39942983 - 39942809
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    ||||||| | ||||| |||||||||| |||| | |||||||| |||||| || ||||| || ||||||||||||||||||||||||||||| ||| |||     
T  39942983 atcgagctaactcataaaccaaacgagtcgagccatctataactcaagttcagctcatctatttaacgaacttaattttcagctcaagttcagctcatta 39942884  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
     ||||||||||||| |||||  ||  ||||| ||| |||||||| |||||||| |||||||||||| ||||||||    
T  39942883 agttcatgaaccaagttcaacagattaattgccgaatcgaatttcgaactatactcgagttggttcagttcattg 39942809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 146 - 320
Target Start/End: Original strand, 41609845 - 41610018
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  41609845 atcgagtcatctcatgaacccaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 41609944  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||||||||||||| ||||| |||  || | ||||||||||| | |||||||| ||||||||| |||||||||||    
T  41609945 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttgg-tcggttcattg 41610018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 153 - 326
Target Start/End: Original strand, 32689133 - 32689306
Alignment:
Q  153 catctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 252  Q
    ||||||||||||  ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  || |||||||    
T  32689133 catctcatgaacttaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcat 32689232  T
Q  253 gaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||| ||||| |||  |  | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  32689233 gaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcagcc 32689306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 146 - 326
Target Start/End: Complemental strand, 33438914 - 33438734
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| |||||| |||||||||| | ||||||||  |||| ||||| |  | |||| ||| || ||||||||||||||||||||||||||| || ||||    
T  33438914 atcgagtcatctcgtgaaccaaacaagtcgaactacatatagttcaactttagctcaattagttgacgaacttaattttcagctcaagttcgactcattt 33438815  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||| | | |||||||||| |||||||   |||| || ||||||||||||||||||||| |||||    
T  33438814 ggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacaaactttaatcgagttggttcggttcattgtcagcc 33438734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 157 - 326
Target Start/End: Original strand, 40943529 - 40943698
Alignment:
Q  157 tcatgaaccaaacgaatcgaactat-ctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    ||||||||||||||| |||||| || ||| | ||||||| ||||||||||| ||||||| ||||||||||| |||||||||| || ||||||||||||||    
T  40943529 tcatgaaccaaacgagtcgaaccatacta-agttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaa 40943627  T
Q  256 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||| | ||||| ||||||| || | |||| | | ||||||| ||||||||||||||||| |||| |||||    
T  40943628 ccaagtccaatgaaccaattatcaaatcgagtatcgaactattttcgagttggttcggtttattgccagcc 40943698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 157 - 326
Target Start/End: Original strand, 12710670 - 12710839
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| |||||| ||    || |||||| | ||||||||| ||||||| ||||||||||| |||||||||| || |||||||||||||||    
T  12710670 tcatgaaccaaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaac 12710769  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||| ||||| |   ||||| |||| |||||| | ||||||| |||||||||||||||||||||| |||||    
T  12710770 caagttcaacgagtcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgccagcc 12710839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 157 - 326
Target Start/End: Complemental strand, 19560946 - 19560777
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    |||||||| || ||| || |||||| ||||| |||||| |  |||||||| |||||| |||||| | | | ||||||||| |||| ||| ||||||||||    
T  19560946 tcatgaacaaatcgagtcaaactatatataactcaagttcggctcatttatttaacggacttaactcttaactcaagttcagcttgtttcgttcatgaac 19560847  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||| ||||| | |  |||||||||||||||||  |||||||||||||||||||||||||||||| |||||    
T  19560846 caagttcaacgaattaattgtcgagtcgaattccgaactatattcgagttggttcggttcattgccagcc 19560777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 46293578 - 46293429
Alignment:
Q  1 aaacgttttatgttttagtggaattggaaaatggaataattattaaaggaattaaggaaatgaagact-------cttatgctactaagtgaaattccta 93  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||        ||   ||| |||||||||||||||    
T  46293578 aaacgttttatattttggtggaattggaaaatggaataattattaaaggatttaaggaaatgaagactttgggcagttggactaataagtgaaattccta 46293479  T
Q  94 cttcctagatggtggaacggatggataaaaagaaaaggagaaatgtaacga 144  Q
    || | ||||| ||| ||||||||| | ||||||||||||||||||||||||    
T  46293478 ctccatagatagtgaaacggatgggt-aaaagaaaaggagaaatgtaacga 46293429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 145 - 320
Target Start/End: Original strand, 52934768 - 52934943
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    ||||||| || |||||||||||| ||| ||||||||| ||||  |||||| |  |||||||| |||||||||||||||||| |||||||||| ||| |||    
T  52934768 tatcgagtcagctcatgaaccaatcgagtcgaactatatatagatcaagttcggctcatttatttaacgaacttaattttctgctcaagttcagctcatt 52934867  T
Q  245 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    ||||||||||||||| |||||||    |||| |||| |||| ||  |||||||  || ||||||||| ||||||||    
T  52934868 tggttcatgaaccaagttcaatgagttaattatcgaatcgagttccgaactattgtcaagttggttcagttcattg 52934943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 145 - 326
Target Start/End: Original strand, 25253658 - 25253839
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    |||||||||| |||||||||||| ||| ||||  ||  ||||  | |||| |  |||||||| ||||||||||||||||| ||||||||||| ||| |||    
T  25253658 tatcgagccaactcatgaaccaatcgagtcgagttacatatagcttaagttcggctcatttatttaacgaacttaatttttagctcaagttcagctcatt 25253757  T
Q  245 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||||||||||| |||||       ||||||||||||| ||   ||||||||||||||||||||||||||||| |||||    
T  25253758 tggttcatgaaccaagttcaacaagtttattgtcgagtcgagttccaaactatattcgagttggttcggttcattgccagcc 25253839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 157 - 326
Target Start/End: Complemental strand, 30662303 - 30662134
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| |||||||||    || |||||| | ||||||||| ||||||| ||||||||||| |||||||||| || ||||| |||||||||    
T  30662303 tcatgaaccaaacgagtcgaactatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaac 30662204  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||| ||||| |   ||||| |||| |||||| |  |||||| ||||||||||||||| |||||| |||||    
T  30662203 caagttcaacgagtcaattatcgaatcgaatctcaaactattttcgagttggttcggctcattgtcagcc 30662134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 28242539 - 28242659
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    |||||||||| |||||||||||| ||| ||||||||| || |  |||||| ||  ||||||| |||||||| |||||||||||||||| ||| ||| |||    
T  28242539 tatcgagccagctcatgaaccaaccgagtcgaactatatacagctcaagttcagatcatttatttaacgaatttaattttcagctcaaattcagctcatt 28242638  T
Q  245 tggttcatgaaccaaattcaa 265  Q
    |||||||||||||||||||||    
T  28242639 tggttcatgaaccaaattcaa 28242659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 320
Target Start/End: Complemental strand, 20550374 - 20550211
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||| ||||||| |||||| ||   || ||||||||||||||||||| |||||||| |||||||||| |||| ||||| || ||||||||| |||||    
T  20550374 tcatgaatcaaacgagtcgaaccatacttagttcaagtacaactcatttatttaacgaatttaattttcaactcatgttcgactcatttggttcgtgaac 20550275  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    ||| |||||   | ||||| |||| |||| | | ||||||| |||||||||||| |||||||||    
T  20550274 caagttcaacaaatcaattatcgaatcgagtatcgaactattttcgagttggtttggttcattg 20550211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 160 - 265
Target Start/End: Original strand, 5418649 - 5418754
Alignment:
Q  160 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    ||||||||| || ||||||||| ||||| |||||| ||||||||||| |||||||||||||| || |||||||||||| ||  |||||||||||||| ||    
T  5418649 tgaaccaaatgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcgactcgtttggttcatgaactaa 5418748  T
Q  260 attcaa 265  Q
     |||||    
T  5418749 gttcaa 5418754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 189 - 326
Target Start/End: Complemental strand, 26049680 - 26049543
Alignment:
Q  189 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 288  Q
    |||||| | ||| ||||| ||||||| ||||||||||| |||||||||| || ||||| |||||||||||| |||||  |  ||||| |||| ||||||     
T  26049680 tcaagttcgactaatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaacaggtcaattatcgaatcgaatc 26049581  T
Q  289 ttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |  |||||| |||||||||||||||||||||| |||||    
T  26049580 tcaaactattttcgagttggttcggttcattgccagcc 26049543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 44574483 - 44574663
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    ||||||| | ||||||||||||||||  |||||||| | ||  |||||| |  |||||||||| ||||||||| ||||| | ||||||||| ||| |||     
T  44574483 atcgagctaactcatgaaccaaacgagccgaactatatgtagctcaagttcggctcatttaataaacgaacttgatttttaactcaagttcagctcatta 44574582  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||| |||| || ||||| | |  ||||| ||||||||  || |||||||||||||||||  ||||||||||| |||||    
T  44574583 ggttcacgaactaagttcaacgaattaattgccgagtcgagcttcgaactatattcgagttgtctcggttcattgccagcc 44574663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 326
Target Start/End: Complemental strand, 23206483 - 23206311
Alignment:
Q  153 catctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 252  Q
    ||||||||||||| ||  | ||||||||| | ||  | |||| || ||||||||||||| |||||||||||||||||||||| | |||  || |||||||    
T  23206483 catctcatgaacctaataagtcgaactatatgtagcttaagttcagctcatttaattaa-gaacttaattttcagctcaagtccagctcgttaggttcat 23206385  T
Q  253 gaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||| || |||||  ||  || | || |||||||| | |||||||| ||||||||||||||||||||| |||||    
T  23206384 gaacaaagttcaacagattaaatatcaagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 23206311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 326
Target Start/End: Original strand, 52199429 - 52199566
Alignment:
Q  189 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 288  Q
    |||||| || |||||||  ||||||||||||||||||||||||||||| |||  ||||||||||||||||| ||||| | |  ||||||||| |||| |     
T  52199429 tcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgaattaattgtcgaatcgagtc 52199528  T
Q  289 ttgaactatattcgagttggttcggttcattggcagcc 326  Q
       ||||||  ||||||||||||| ||||||| |||||    
T  52199529 ccaaactattgtcgagttggttcgattcattgtcagcc 52199566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 145 - 255
Target Start/End: Original strand, 28700953 - 28701063
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    ||||||| || |||||||| ||| ||| ||||||||  ||||| |||||| ||||||||||  |||||||| ||||||||||| |||| |||  ||||||    
T  28700953 tatcgagtcaactcatgaatcaaccgagtcgaactagatataactcaagttcaactcatttttttaacgaatttaattttcagttcaacttcaacttatt 28701052  T
Q  245 tggttcatgaa 255  Q
    |||||||||||    
T  28701053 tggttcatgaa 28701063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 145 - 246
Target Start/End: Original strand, 52199345 - 52199446
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    |||||||||| ||||||||||||  || ||||||||| || |  |||||| || |||||||  ||||||||||||||||||||||||||||| ||| |||    
T  52199345 tatcgagccaactcatgaaccaactgagtcgaactatataaagctcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcatt 52199444  T
Q  245 tg 246  Q
    ||    
T  52199445 tg 52199446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 156 - 262
Target Start/End: Original strand, 50965370 - 50965477
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaa-ttttcagctcaagttcggcttatttggttcatga 254  Q
    ||||||| |||| ||| |||||| || ||||  |||||| || |||||||| ||||||||||||| |||||||||||| ||| ||| ||| |||||||||    
T  50965370 ctcatgagccaatcgagtcgaaccatatatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatga 50965469  T
Q  255 accaaatt 262  Q
    ||||||||    
T  50965470 accaaatt 50965477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 156 - 262
Target Start/End: Original strand, 51068505 - 51068612
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaa-ttttcagctcaagttcggcttatttggttcatga 254  Q
    ||||||| |||| ||| |||||| || ||||  |||||| || |||||||| ||||||||||||| |||||||||||| ||| ||| ||| |||||||||    
T  51068505 ctcatgagccaatcgagtcgaaccatatatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatga 51068604  T
Q  255 accaaatt 262  Q
    ||||||||    
T  51068605 accaaatt 51068612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 273
Target Start/End: Complemental strand, 54432332 - 54432247
Alignment:
Q  188 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaa 273  Q
    ||||||| ||||||||||| ||||||| ||||||||| | |||||||||| || |||| ||||||||||||| | ||||| |||||    
T  54432332 ttcaagttcaactcatttatttaacgagcttaatttttaactcaagttcgactcatttagttcatgaaccaagtccaatgaaccaa 54432247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 173 - 319
Target Start/End: Original strand, 1674613 - 1674759
Alignment:
Q  173 tcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggacca 272  Q
    ||||||||| || || |||||| || || ||||| |||||  ||  ||||||||||| ||||||  || |||||||||||||||||| |||||      |    
T  1674613 tcgaactatatacaactcaagttcagcttatttatttaacatacaaaattttcagcttaagttcaactcatttggttcatgaaccaagttcaacaagata 1674712  T
Q  273 attgtcgagtcgaattttgaactatattcgagttggttcggttcatt 319  Q
    ||||| || ||||||| ||||||||  ||||||||||||||||||||    
T  1674713 attgttgaatcgaattctgaactattgtcgagttggttcggttcatt 1674759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 53529773 - 53529683
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttc 236  Q
    |||||| |||||  |||||||||||| |||||| |  |||| ||||||| || |||| ||| || ||||||||||||||||||||||||||    
T  53529773 atcgagtcatcttgtgaaccaaacgagtcgaacaacatatagttcaagttcagctcaattagttgacgaacttaattttcagctcaagttc 53529683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 320
Target Start/End: Original strand, 18074586 - 18074707
Alignment:
Q  199 ctcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactata 298  Q
    |||||||| |||||||||||||||||||| |||| |||  || |||| ||||||||| ||||||||| | |  |||| || | |||| | | ||||| ||    
T  18074586 ctcatttagttaacgaacttaattttcagttcaaattcaactcatttagttcatgaaacaaattcaacgaattaattatcaaatcgagtctcgaactcta 18074685  T
Q  299 ttcgagttggttcggttcattg 320  Q
    |||||||||| || ||||||||    
T  18074686 ttcgagttggctcagttcattg 18074707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 210 - 319
Target Start/End: Original strand, 30743593 - 30743702
Alignment:
Q  210 aacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggt 309  Q
    ||||||||||||| ||| ||||| ||| ||| |||||||||||||||||| ||||| |     ||  |||||||||  |  |||||||||||||||||||    
T  30743593 aacgaacttaattctcaactcaaattcagctcatttggttcatgaaccaagttcaacgagttcatcttcgagtcgagctccgaactatattcgagttggt 30743692  T
Q  310 tcggttcatt 319  Q
    ||||||||||    
T  30743693 tcggttcatt 30743702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 31589622 - 31589747
Alignment:
Q  189 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 288  Q
    |||||| |||| | |||| ||||| ||||||||||||| |||||||| | ||||||||||| ||||||||| | ||||| |   |||  ||| || ||||    
T  31589622 tcaagttcaacccgtttatttaacaaacttaattttcaactcaagtttgacttatttggtttatgaaccaagtccaatgaattgattaccgaatcaaatt 31589721  T
Q  289 ttgaactatattcgagttggttcggt 314  Q
    ||||| ||| || |||||||||||||    
T  31589722 ttgaattattttggagttggttcggt 31589747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 185 - 308
Target Start/End: Complemental strand, 15822493 - 15822370
Alignment:
Q  185 taattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcg 284  Q
    |||||||||| |  |||||||| || |||| ||||||||||| |||||||||  || | |||| ||||||||||| ||||| | | |||||  ||| |||    
T  15822493 taattcaagttcggctcatttatttgacgagcttaattttcaactcaagttctactcaattggatcatgaaccaagttcaacgaaacaattaccgaatcg 15822394  T
Q  285 aattttgaactatattcgagttgg 308  Q
    ||||| ||||||| ||||| ||||    
T  15822393 aatttcgaactattttcgaattgg 15822370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 326
Target Start/End: Complemental strand, 54432255 - 54432180
Alignment:
Q  251 atgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||||| | ||||| ||||||| |||| |||| | | ||||||| |||||||||||||||||||||| |||||    
T  54432255 atgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgccagcc 54432180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 39470741 - 39470703
Alignment:
Q  1 aaacgttttatgttttagtggaattggaaaatggaataa 39  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  39470741 aaacgttttatgttttggtggaattggaaaatggaataa 39470703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 45714730 - 45714832
Alignment:
Q  223 ttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggc 322  Q
    ||||||||||||||| || ||||| || ||||| ||| ||||| | | |||||||||| ||||||   ||||| || |||||||||||| |||||||| |    
T  45714730 ttcagctcaagttcgactcatttgatttatgaatcaagttcaacgaatcaattgtcgaatcgaataacgaactttaatcgagttggttcagttcattgcc 45714829  T
Q  323 agc 325  Q
    |||    
T  45714830 agc 45714832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 156 - 265
Target Start/End: Original strand, 26136300 - 26136409
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    |||||||||||||||| || |||||| | || || | || ||||||||||  ||||| ||| ||||||| | ||||||||||||| | || |||||| ||    
T  26136300 ctcatgaaccaaacgagtcaaactatatgtagtttatgttcaactcatttgtttaacaaacataattttgaactcaagttcggctcacttagttcataaa 26136399  T
Q  256 ccaaattcaa 265  Q
    |||| |||||    
T  26136400 ccaagttcaa 26136409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 1072882 - 1072782
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    |||||| |||||||||  |||||||| ||||| |||||| ||  |||||  |||||| |||||||||||| ||||||  ||  || ||||||||||||||    
T  1072882 ctcatggaccaaacgaggcgaactatatataactcaagttcagttcattatattaacaaacttaattttcggctcaaactcaactcatttggttcatgaa 1072783  T
Q  256 c 256  Q
    |    
T  1072782 c 1072782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 45995257 - 45995362
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| |||||| ||||| |||||||| ||||||  ||||| |||||| || || | ||| || ||||||||||||||  | |||||||| ||| ||||    
T  45995257 atcgagtcatctcgtgaactaaacgaatagaactacatataactcaagttcagcttaattagttgacgaacttaatttt-tgttcaagttcagctcattt 45995355  T
Q  246 ggttcat 252  Q
    |||||||    
T  45995356 ggttcat 45995362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 320
Target Start/End: Complemental strand, 47782210 - 47782130
Alignment:
Q  240 ttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||||| |||||||||||||||||||||     ||||||||||||| |||  || |||||| ||||||  |||||||||||    
T  47782210 ttatttagttcatgaaccaaattcaatgtgttgattgtcgagtcgagtttaaaaatatatttgagttgactcggttcattg 47782130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 137; Significance: 3e-71; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 7447838 - 7448018
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| | ||||||||||| |||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7447838 atcgagtcgtctcatgaacctaacgaatcgaaccatctatagttcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcattt 7447937  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  7447938 ggttcatgaaccaagttcaatgaaccaattgtcgagtcgaattatgaactatattcgagttggttcggttcattgtcagcc 7448018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 149 - 320
Target Start/End: Original strand, 20400961 - 20401132
Alignment:
Q  149 gagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggt 248  Q
    |||||| ||||| |||||||||| ||||||||| | ||| |||||| || ||||||||||||| ||||||||| || ||||||||||| | | | | |||    
T  20400961 gagccaactcattaaccaaacgagtcgaactatatgtaactcaagttcagctcatttaattaaagaacttaatatttagctcaagttcagttcagtaggt 20401060  T
Q  249 tcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||||||||||||||||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||||    
T  20401061 tcatgaaccaaattcaatggactaattaccgagtcgaatttcgaactatattcgagttggttcggttcattg 20401132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 146 - 320
Target Start/End: Complemental strand, 5776313 - 5776139
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  5776313 atcgagtcatctcatgaaccgaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 5776214  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||||||||||||| ||||| |||  || | ||||||||||| | |||||||| |||||||||||||||||||||    
T  5776213 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 5776139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 146 - 320
Target Start/End: Original strand, 45176207 - 45176381
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||||||||||||| ||||| ||||| ||| | ||  |||||| |||||||||||||||||||||||||||||||||| |||||| |||  |||    
T  45176207 atcgagtcatctcatgaacctaacgagtcgaattatatgtagctcaagttcaactcatttaattaacgaacttaattttcagctaaagttcagctcgttt 45176306  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||||||||||||| ||||| |||  |||| ||||||||||| |  ||||||| ||||||| |||||||||||||    
T  45176307 ggttcatgaaccaagttcaacggattaattatcgagtcgaatgtcaaactataatcgagtttgttcggttcattg 45176381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 146 - 326
Target Start/End: Complemental strand, 666030 - 665850
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||||||||||||| ||||| |||| |||| | ||  |||| | || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  666030 atcgagccatctcatgaacctaacgagtcgagctatatgtagctcaaattcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 665931  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||||||||||||| || |||  || | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  665930 ggttcatgaaccaaatttaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 665850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 157 - 326
Target Start/End: Complemental strand, 33899116 - 33898947
Alignment:
Q  157 tcatgaaccaaacgaatcgaactat-ctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    ||||||||||||||| |||||| || ||| |||| |||| ||||||||||| ||||||| ||||||||||| |||||||||| || ||||||||||||||    
T  33899116 tcatgaaccaaacgagtcgaaccatacta-aatttaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaa 33899018  T
Q  256 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||| | ||||| || |||| |||| |||||| | ||||||| |||||||||||||||||||||| |||||    
T  33899017 ccaagtccaatgaactaattctcgaatcgaatatcgaactattttcgagttggttcggttcattgtcagcc 33898947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 146 - 320
Target Start/End: Original strand, 37334240 - 37334414
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||||||||||||| || || ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  37334240 atcgagccatctcatgaacctaatgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 37334339  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||||||||||||| ||||| |||  || | |||| |||||| | |||||||| |||||||||||||||||||||    
T  37334340 ggttcatgaaccaagttcaacggattaaatatcgaatcgaatgtcgaactataatcgagttggttcggttcattg 37334414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 3942138 - 3942318
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| |||||| ||||||||||||  |||||||  ||||  |||||| || |||| |||||| ||||||||||||||||||||||||  || | ||||    
T  3942138 atcgagtcatctcgtgaaccaaacgagccgaactacatatagctcaagttcagctcaattaattcacgaacttaattttcagctcaagtctggttcattt 3942237  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||||| | ||| |||||| |||||||  ||||| || ||||||||||||||||||||| |||||    
T  3942238 ggttcatgaaccaagttcaatgaatcaactgtcgaatcgaattacgaactttaatcgagttggttcggttcattgtcagcc 3942318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 146 - 326
Target Start/End: Complemental strand, 5795119 - 5794939
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||||||||||||| ||||| | ||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  5795119 atcgagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 5795020  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||| |||  |  | ||||||||||| | |||||||| ||| ||||||||||||||||| |||||    
T  5795019 ggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgggttggttcggttcattgccagcc 5794939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 146 - 320
Target Start/End: Original strand, 43052834 - 43053008
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||||||||||| | ||||| ||||||||| | ||  |||||| || ||||| ||||||||||||||||||||| |||||||| | ||| |||     
T  43052834 atcgagtcatctcatgaatctaacgagtcgaactatatgtagctcaagttcagctcatctaattaacgaacttaattttcggctcaagtccagctcatta 43052933  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||||||||||||| ||||| |||  || | ||||||||||| | |||||||| |||||||||||||||||||||    
T  43052934 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 43053008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 188 - 320
Target Start/End: Original strand, 26719819 - 26719951
Alignment:
Q  188 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 287  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||||||| || |||||||||||||||||| | ||||| ||||||| |||| |||| |    
T  26719819 ttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagt 26719918  T
Q  288 tttgaactatattcgagttggttcggttcattg 320  Q
     | ||||||| |||||||||||||| |||||||    
T  26719919 atcgaactattttcgagttggttcgattcattg 26719951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 160 - 320
Target Start/End: Original strand, 45055704 - 45055864
Alignment:
Q  160 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||| ||||||| ||||||||| ||||| |||||| ||||||||||| |||||||||||||| || |||||||||||||||  |||||||||||||||||    
T  45055704 tgaatcaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaa 45055803  T
Q  260 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
     ||||| | || ||||  |||||||| ||  ||||| |||||||||||  |||||||||||    
T  45055804 gttcaacgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattg 45055864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 160 - 326
Target Start/End: Complemental strand, 11595965 - 11595799
Alignment:
Q  160 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||||||||| | ||||||||| ||||| |||||  ||||||||||| |||||||||||||| || |||||||||||||||  |||||||||||||||||    
T  11595965 tgaaccaaacaagtcgaactatatataactcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaa 11595866  T
Q  260 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
     ||||| | || ||||  |||||||| ||  ||||| |||||||||||  ||||||||||| |||||    
T  11595865 gttcaacgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgtcagcc 11595799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 188 - 326
Target Start/End: Complemental strand, 18250134 - 18249996
Alignment:
Q  188 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 287  Q
    ||||||| ||||||||||| ||||||| | ||||||||| |||||||||| || |||||||||||||||||| ||||| | | ||||| |||| |||| |    
T  18250134 ttcaagttcaactcatttatttaacgagcataattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaatcaattatcgaatcgagt 18250035  T
Q  288 tttgaactatattcgagttggttcggttcattggcagcc 326  Q
     ||||||||| |||||||||||||||||||||| |||||    
T  18250034 cttgaactattttcgagttggttcggttcattgccagcc 18249996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 22075025 - 22075205
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    ||||||||| || ||||||||| ||| ||||||||| || |  |||||| || |||||||| ||||||||||||||||||||||||||||| ||| ||||    
T  22075025 atcgagccaactaatgaaccaatcgagtcgaactatatacagatcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcattt 22075124  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||| |||||||  ||||| |    ||||||||| |||| || | ||||||  ||||||||||||||||||||| |||||    
T  22075125 ggttcgtgaaccacgttcaacgagttaattgtcgaatcgagttctaaactattatcgagttggttcggttcattgccagcc 22075205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 154 - 326
Target Start/End: Original strand, 36926969 - 36927141
Alignment:
Q  154 atctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatg 253  Q
    ||||||||| || ||||| ||||||||| | ||  |||||| ||||||||||||||||||||||||||||| ||||||||| |  ||  || ||||||||    
T  36926969 atctcatgagcctaacgagtcgaactatatgtagctcaagttcaactcatttaattaacgaacttaatttttagctcaagtccaactcgttaggttcatg 36927068  T
Q  254 aaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||| ||||| |||  |  | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  36927069 aaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 36927141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 146 - 325
Target Start/End: Complemental strand, 3930899 - 3930720
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||||||||| ||| ||||| | ||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  3930899 atcgagccatctcatgtacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 3930800  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagc 325  Q
    |||||||| ||||| ||||| |||  |  | ||||||||||| | |||||||| |||||||| |||||||||||| ||||    
T  3930799 ggttcatggaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttgtttcggttcattgccagc 3930720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 146 - 326
Target Start/End: Complemental strand, 28949941 - 28949761
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||| ||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||| ||||||| | | |||  ||     
T  28949941 atcgagtcatttcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaatttttagctcaattccagctcgtta 28949842  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||| |||  |  | ||||||||||| | |||||||| |||||||| |||||||||||| |||||    
T  28949841 ggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttgattcggttcattgccagcc 28949761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 48505971 - 48505852
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||||||||| ||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | ||| |||     
T  48505971 atcgagccatctcatgtacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcatta 48505872  T
Q  246 ggttcatgaaccaaattcaa 265  Q
    |||||||||||||| |||||    
T  48505871 ggttcatgaaccaagttcaa 48505852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 7447583 - 7447721
Alignment:
Q  1 aaacgttttatgttttagtggaattggaaaatggaataattattaaaggaattaaggaaatgaagactct---tatgctact--aagtgaaattcctact 95  Q
    |||| ||||||||||| || |||||||||||||||||||| ||||||||| ||||| |||||||| ||||   || |||| |  ||||||||||||||||    
T  7447583 aaacattttatgttttggtagaattggaaaatggaataatgattaaaggagttaagcaaatgaaggctcttggtaggctaattaaagtgaaattcctact 7447682  T
Q  96 tcctagatggtggaacggatggataaaaagaaaaggaga 134  Q
    |||||||| ||||||||||||| |||||| ||| |||||    
T  7447683 tcctagatagtggaacggatgggtaaaaataaatggaga 7447721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 189 - 326
Target Start/End: Complemental strand, 17025501 - 17025364
Alignment:
Q  189 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 288  Q
    |||||| | ||||||||| ||||||| ||||||||||| |||||||||| || ||||||||| |||||||| ||||| |   ||||| |||| |||||      
T  17025501 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgagtcaattatcgaatcgaacc 17025402  T
Q  289 ttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  17025401 ttgaactattttcgagttggttcggttcattgtcagcc 17025364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 160 - 307
Target Start/End: Complemental strand, 40480220 - 40480072
Alignment:
Q  160 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggct-tatttggttcatgaacca 258  Q
    |||||||||||| ||||||||| ||||| |||||| ||||||||||| |||||||||||||| || |||||||||||||||   ||||||||||||||||    
T  40480220 tgaaccaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgttttggttcatgaacca 40480121  T
Q  259 aattcaatggaccaattgtcgagtcgaattttgaactatattcgagttg 307  Q
    | ||||| | || ||||  ||| |||| ||  ||||| |||||||||||    
T  40480120 agttcaacgaactaattaccgactcgagttccgaactttattcgagttg 40480072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 42072045 - 42072225
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  42072045 atcgagtcatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 42072144  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||| ||| ||||| |||  |  | |||| |||||| |  ||||||| |||||||| |||||| ||||| |||||    
T  42072145 ggttcatgaatcaagttcaacggattagatatcgaatcgaatgtcaaactataatcgagttgtttcggtacattgtcagcc 42072225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 320
Target Start/End: Complemental strand, 18740358 - 18740227
Alignment:
Q  189 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 288  Q
    |||||| | ||||||||| ||||||| ||||||||||| |||||||||| || |||||||||||||||||| || ||||   ||||| || | ||||||     
T  18740358 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtttaatgagtcaattatcaaatcgaatc 18740259  T
Q  289 ttgaactatattcgagttggttcggttcattg 320  Q
    | ||||||| ||||||||||||||||||||||    
T  18740258 tcgaactattttcgagttggttcggttcattg 18740227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 23237685 - 23237587
Alignment:
Q  161 gaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||| |||||| ||||||| ||||||| |||||| ||||||||||||||||||||||||||| | | ||||||||||||| ||| ||||||||||||||    
T  23237685 gaacaaaacgagtcgaactgtctataactcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaa 23237587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 145 - 326
Target Start/End: Complemental strand, 44422086 - 44421904
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaactt-aattttcagctcaagttcggcttat 243  Q
    |||||||||| |||||||||||| ||| ||||||||| || |  |||||| || |||||||  ||||||||||| |||||||||||||||||| |||  |    
T  44422086 tatcgagccaactcatgaaccaaccgagtcgaactatataaagctcaagttcagctcatttgtttaacgaacttaaattttcagctcaagttcagctcgt 44421987  T
Q  244 ttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||||| ||||| |    ||||||||| |||| |    ||||||  ||||||||||||||||||||| |||||    
T  44421986 ttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtcccaaactattgtcgagttggttcggttcattgacagcc 44421904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 188 - 326
Target Start/End: Complemental strand, 49034365 - 49034227
Alignment:
Q  188 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 287  Q
    ||||||| | ||||||||| || |||| ||||||||||| |||||||||| || |||||||||||||||||| ||||| | | |||||  ||| ||||||    
T  49034365 ttcaagttcgactcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaaacaattaccgaatcgaat 49034266  T
Q  288 tttgaactatattcgagttggttcggttcattggcagcc 326  Q
    || ||||||| |||||||||| ||||||| ||| |||||    
T  49034265 ttcgaactattttcgagttggatcggttcgttgccagcc 49034227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 145 - 326
Target Start/End: Original strand, 36472400 - 36472581
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    ||||||||||  ||||||||||||||| |||||| ||      ||||||| ||||| ||||| ||||||| ||||||||||| ||||||||||||| |||    
T  36472400 tatcgagccagttcatgaaccaaacgagtcgaaccatgctcggttcaagttcaacttatttatttaacgagcttaattttcaactcaagttcggctcatt 36472499  T
Q  245 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||||||||||| ||||| | | || || |||| |||| | |  |  ||| |||||||||||||||||||||| |||||    
T  36472500 tggttcatgaaccaagttcaacgaatcatttatcgaatcgagtatcaagttattttcgagttggttcggttcattgtcagcc 36472581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 157 - 326
Target Start/End: Complemental strand, 46573784 - 46573615
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| |||||| ||    || |||||| | ||||||||| ||||||| ||||||||||| || ||||||| || |||||||||||||||    
T  46573784 tcatgaaccaaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaacttaagttcgactcatttggttcatgaac 46573685  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||| ||||| |   ||||| |||| |||||| | ||| ||| || ||||||||||||||||||| |||||    
T  46573684 caagttcaacgagtcaattatcgaatcgaatctcgaattatttttgagttggttcggttcattgccagcc 46573615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 26216234 - 26216353
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || ||| |||||||||||||||||||||||||||||||| | |||  ||     
T  26216234 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcctttaattaacgaacttaattttcagctcaagtccagctcgtta 26216333  T
Q  246 ggttcatgaaccaaattcaa 265  Q
    ||||||| |||||| |||||    
T  26216334 ggttcataaaccaagttcaa 26216353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 148 - 318
Target Start/End: Original strand, 10618885 - 10619055
Alignment:
Q  148 cgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttgg 247  Q
    ||||||| |||||||| |||  || ||||||||| || |  |||||| || |||||||| ||||||||||||||||||||||||||||| ||| |||| |    
T  10618885 cgagccagctcatgaagcaacagagtcgaactatatacagctcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttag 10618984  T
Q  248 ttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcat 318  Q
    |||||||||||| ||||| |    ||||||||| |||| ||   ||||||  |||||||| ||||||||||    
T  10618985 ttcatgaaccaagttcaacgagttaattgtcgaatcgagttccaaactattgtcgagttgattcggttcat 10619055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 189 - 319
Target Start/End: Complemental strand, 21760723 - 21760593
Alignment:
Q  189 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 288  Q
    |||||| ||||||||||| |||||||  ||| |||||| |||||||||| || ||||||||| ||||| || ||||| | | ||||| |||| |||| ||    
T  21760723 tcaagttcaactcatttatttaacgagtttagttttcaactcaagttcgactcatttggttcgtgaacaaagttcaacgaatcaattatcgaatcgagtt 21760624  T
Q  289 ttgaactatattcgagttggttcggttcatt 319  Q
    | ||||||| |||||||||||||||||||||    
T  21760623 tcgaactattttcgagttggttcggttcatt 21760593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 33935469 - 33935589
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    |||||||||| |||||| || || ||| ||||||||| || |  |||||| || |||||||  ||||||||||||||||||||||||||||| |||  ||    
T  33935469 tatcgagccaactcatggactaaccgagtcgaactatataaagctcaagttcatctcatttgtttaacgaacttaattttcagctcaagttcagctcgtt 33935568  T
Q  245 tggttcatgaaccaaattcaa 265  Q
    ||||||||||||||| |||||    
T  33935569 tggttcatgaaccaagttcaa 33935589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 326
Target Start/End: Original strand, 33124710 - 33124837
Alignment:
Q  199 ctcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactata 298  Q
    |||||||| |||||||||||||||||||||||||||||   | ||||||||||| |||||| ||||| |    ||||||||| |||| |||  ||||||     
T  33124710 ctcatttatttaacgaacttaattttcagctcaagttcaattcatttggttcataaaccaagttcaacgagttaattgtcgaatcgagtttcaaactatt 33124809  T
Q  299 ttcgagttggttcggttcattggcagcc 326  Q
     ||||||||||||||||||||| |||||    
T  33124810 gtcgagttggttcggttcattgccagcc 33124837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 156 - 326
Target Start/End: Complemental strand, 222399 - 222229
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    |||||||||||| ||| ||||||||| || |  |||||| || |||||||  |||||||| ||||||||||| |||||||| |||  |||||||||||||    
T  222399 ctcatgaaccaaccgagtcgaactatataaagctcaagttcagctcatttgtttaacgaatttaattttcagttcaagttcagctcgtttggttcatgaa 222300  T
Q  256 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||| |    ||||||||| || | |    ||||||  ||||||||||||||||||||| |||||    
T  222299 ccaaattcaacgagttaattgtcgaatcaagtcccaaactattgtcgagttggttcggttcattgccagcc 222229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 146 - 256
Target Start/End: Original strand, 15434205 - 15434315
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||||||||||| | ||||| ||||||||  | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  15434205 atcgagccatctcatgaagctaacgagtcgaactagatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 15434304  T
Q  246 ggttcatgaac 256  Q
    |||||||||||    
T  15434305 ggttcatgaac 15434315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 157 - 319
Target Start/End: Complemental strand, 23227171 - 23227009
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||| ||| || | |||| || || |||||| |  |||||||| ||||||||||||||||||||||||||||| ||| ||||| |||||| ||    
T  23227171 tcatgaaccaaccgagtcaagctatatacaactcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtac 23227072  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 319  Q
    ||| |||||      ||||||||| |||| ||| |||||||  |||||||||||||| |||||    
T  23227071 caagttcaacaagataattgtcgaatcgagtttcgaactattgtcgagttggttcggatcatt 23227009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 157 - 319
Target Start/End: Complemental strand, 23236324 - 23236162
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||| ||| || | |||| || || |||||| |  |||||||| ||||||||||||||||||||||||||||| ||| ||||| |||||| ||    
T  23236324 tcatgaaccaaccgagtcaagctatatacaactcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtac 23236225  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 319  Q
    ||| |||||      ||||||||| |||| ||| |||||||  |||||||||||||| |||||    
T  23236224 caagttcaacaagataattgtcgaatcgagtttcgaactattgtcgagttggttcggatcatt 23236162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 208 - 326
Target Start/End: Original strand, 33019325 - 33019443
Alignment:
Q  208 ttaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttg 307  Q
    |||||||  |||||||||| |||||||||| |||||||| ||| |||||||| ||||| | ||||||| |||| |||| | | ||||||| || ||||||    
T  33019325 ttaacgagtttaattttcaactcaagttcgacttatttgattcgtgaaccaagttcaacgaaccaattatcgaatcgagtatcgaactatttttgagttg 33019424  T
Q  308 gttcggttcattggcagcc 326  Q
    ||||||||||||| |||||    
T  33019425 gttcggttcattgtcagcc 33019443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 145 - 326
Target Start/End: Complemental strand, 37401750 - 37401569
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    ||||||| |||||| |||| ||||||| || |||||  ||||  |||| | || |||| ||| || |||||||||||||||| |||||||| |||| |||    
T  37401750 tatcgagtcatctcgtgaatcaaacgagtccaactacatatagctcaacttcagctcaattagttgacgaacttaattttcaactcaagtttggctcatt 37401651  T
Q  245 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||||||| ||| |||||   | ||||| |||| |||||||  ||||| || |||| |||||| ||||||||| |||||    
T  37401650 tggttcatgaatcaagttcaacaaatcaattttcgaatcgaattacgaactctaatcgaattggtttggttcattgtcagcc 37401569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 48634408 - 48634528
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    |||||||| | |||||||| ||| ||| ||||||||| |  || |||| |  |||||||||| ||||||||||||||||| |||||||||||  || |||    
T  48634408 tatcgagctaactcatgaatcaaccgagtcgaactatattcaactcaattctaactcatttatttaacgaacttaatttttagctcaagttcaactcatt 48634507  T
Q  245 tggttcatgaaccaaattcaa 265  Q
    ||||||||||||||| |||||    
T  48634508 tggttcatgaaccaagttcaa 48634528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 156 - 326
Target Start/End: Original strand, 10096443 - 10096613
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    |||||||| |||||||  |||| ||| | || || |||| || |||||||| ||| ||||||||||||   | ||||||||  || ||||||||||||||    
T  10096443 ctcatgaatcaaacgagccgaattatatgtagtttaagttcagctcatttagttagcgaacttaatttctcgttcaagttcaactcatttggttcatgaa 10096542  T
Q  256 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||| ||| ||| || |||||||||||||| ||| ||||||| ||||| |||  || |||||||| |||||    
T  10096543 ccaagttcgatgaacaaattgtcgagtcgagtttcgaactatgttcgaattgcctcagttcattgccagcc 10096613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 23223622 - 23223561
Alignment:
Q  161 gaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaatt 222  Q
    |||| |||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  23223622 gaacaaaacgagtcgaactatctataactcaagttcaactcatttaattaacgaacttaatt 23223561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 29037953 - 29037853
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    |||||||| ||||||| |||||| || |||| || || | ||||||||||  |||||| |||||||||||| |||||||||| || ||||||||||||||    
T  29037953 ctcatgaatcaaacgagtcgaaccatatatagtttaaattcaactcatttgtttaacggacttaattttcaactcaagttcgtctcatttggttcatgaa 29037854  T
Q  256 c 256  Q
    |    
T  29037853 c 29037853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 259
Target Start/End: Original strand, 17608717 - 17608787
Alignment:
Q  189 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||||| ||||||| ||| || ||||||||||||||||| |||||||||||| ||||||||||| ||||||    
T  17608717 tcaagttcaactcaattagttgacgaacttaattttcagatcaagttcggctcatttggttcatcaaccaa 17608787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 156 - 326
Target Start/End: Complemental strand, 33171707 - 33171537
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    |||||||||||| ||| || |||||| || || |||||| |  |||||||| |||| |||||||||||| ||||||||||| ||| ||||||||||| ||    
T  33171707 ctcatgaaccaaccgagtcaaactatatacaactcaagttcggctcatttatttaatgaacttaatttttagctcaagttcagctcatttggttcataaa 33171608  T
Q  256 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
     ||| |||||      |||||||   |||| ||| |||||||  |||||||||||||| |||||| |||||    
T  33171607 tcaagttcaacaagataattgtcttatcgagtttcgaactattatcgagttggttcggatcattgccagcc 33171537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 326
Target Start/End: Original strand, 32356934 - 32357103
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    |||||||||||| || ||||  |||  ||| || |||| |||||| |||| ||||||||||| ||||||| ||||| ||||||| |||| |||||||||     
T  32356934 tcatgaaccaaatgagtcgagttatacatagtttaagttcaactcgtttacttaacgaactttattttcaactcaaattcggctcatttagttcatgaat 32357033  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||| ||||| | |  |||| |||| |||| | | ||||||| ||  |||||||| ||||||||| |||||    
T  32357034 caagttcaacgaattaattatcgaatcgagtctcgaactatttttaagttggtttggttcattgtcagcc 32357103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 146 - 326
Target Start/End: Complemental strand, 27231722 - 27231542
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||||||||||||||||||| || |||||  ||||  | |||| |   ||| ||| || ||||||||||||||||| |||||||||||| ||||    
T  27231722 atcgagtcatctcatgaaccaaacgagtcaaactacatatagcttaagttcggttcaattagttgacgaacttaattttcagttcaagttcggctcattt 27231623  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    | | |||||| ||| ||| | | | ||||| |||| |||||||  ||||| || |  || ||||||||||||||| |||||    
T  27231622 gatacatgaatcaagttcgacgaatcaattatcgaatcgaattacgaactctaattaagctggttcggttcattgtcagcc 27231542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 188 - 326
Target Start/End: Complemental strand, 35543694 - 35543559
Alignment:
Q  188 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 287  Q
    ||||||| ||||||||||| |   ||| ||||||||||| |||||||||| || |||| ||||||||||||| ||||| | | ||||| |||| | || |    
T  35543694 ttcaagttcaactcatttatt---cgagcttaattttcaactcaagttcgactcatttagttcatgaaccaagttcaacgaatcaattatcgaatggagt 35543598  T
Q  288 tttgaactatattcgagttggttcggttcattggcagcc 326  Q
     |  |||||| |||||||||||||| ||||||| |||||    
T  35543597 ctcaaactattttcgagttggttcgattcattgtcagcc 35543559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 199 - 315
Target Start/End: Complemental strand, 46652763 - 46652647
Alignment:
Q  199 ctcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactata 298  Q
    |||||||||||||| ||||||||| | || | |||||| || |||| |||||||||||||| | |||  ||  |||| |||| |||||||| ||||||||    
T  46652763 ctcatttaattaacaaacttaattcttagtttaagttcagcatattaggttcatgaaccaagtccaacagattaattatcgaatcgaatttcgaactata 46652664  T
Q  299 ttcgagttggttcggtt 315  Q
    ||||| ||||| |||||    
T  46652663 ttcgaattggtccggtt 46652647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 44994147 - 44994056
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcg 237  Q
    |||||| |||||||||||| ||| || ||||||||| || || |||| | || |||| ||| ||| ||||||||||||||||||||||||||    
T  44994147 atcgagtcatctcatgaacaaaatgagtcgaactatatacaactcaaattcagctcaattagttagcgaacttaattttcagctcaagttcg 44994056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 320
Target Start/End: Original strand, 388988 - 389082
Alignment:
Q  226 agctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    ||||||||||| |||  || |||||||||||||| ||||| |||  || | |||||| |||| | |||||||| |||||||| ||||||||||||    
T  388988 agctcaagttcagctcgttaggttcatgaaccaagttcaacggattaaatatcgagttgaatgtcgaactataatcgagttgattcggttcattg 389082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 325
Target Start/End: Original strand, 31491790 - 31491956
Alignment:
Q  159 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaacca 258  Q
    ||||||||||| ||| || |||   ||| ||||||| ||||| ||||| |||||||||||||| || || | ||||||| || ||||||||||||   ||    
T  31491790 atgaaccaaacaaattgagctaaacatagttcaagttcaactaatttatttaacgaacttaatattgagtttaagttcgactcatttggttcatgtgtca 31491889  T
Q  259 aattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagc 325  Q
    | ||||| | |  |||| |||| |||||| |  |||||| || |||||| |||||||||||| ||||    
T  31491890 agttcaacgaattaattatcgaatcgaatctcaaactatttttgagttgattcggttcattgtcagc 31491956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 211 - 320
Target Start/End: Original strand, 37106853 - 37106962
Alignment:
Q  211 acgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggtt 310  Q
    |||||||||||||| ||||||||||||||| ||||||| ||| ||| || ||| | | |  |||| |||| |||||||  ||||| || | |||| ||||    
T  37106853 acgaacttaatttttagctcaagttcggctcatttggtacattaactaagttcgacgaattaattatcgaatcgaattacgaactctaattgagtcggtt 37106952  T
Q  311 cggttcattg 320  Q
    ||||||||||    
T  37106953 cggttcattg 37106962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 257
Target Start/End: Original strand, 37250058 - 37250107
Alignment:
Q  208 ttaacgaacttaattttcagctcaagttcggcttatttggttcatgaacc 257  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||| ||||    
T  37250058 ttaacgaaattaattttcagctcaagtgcggctcatttggttcattaacc 37250107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 37239840 - 37239908
Alignment:
Q  191 aagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||| |||||||||| |||||| ||||| ||||| ||||||| |||  || ||||||||||||||||||    
T  37239840 aagttcaactcatttgattaacaaacttgattttaagctcaaattcatctcatttggttcatgaaccaa 37239908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 2466690 - 2466611
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagtt 235  Q
    |||||||||||| ||| ||||| ||  |||| || ||||  | |||||||| |||||||||| |||||||||||||||||    
T  2466690 ctcatgaaccaatcgagtcgaattacatatagtttaagtttagctcatttatttaacgaactaaattttcagctcaagtt 2466611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 29527401 - 29527438
Alignment:
Q  199 ctcatttaattaacgaacttaattttcagctcaagttc 236  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  29527401 ctcatttaattaacgaacttaatttacagctgaagttc 29527438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 326
Target Start/End: Original strand, 15434311 - 15434347
Alignment:
Q  290 tgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  15434311 tgaactataatcgagttggttcggttcattgccagcc 15434347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 30919427 - 30919503
Alignment:
Q  189 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaa 265  Q
    |||||| |||||||||||  ||||||  ||| |||||| |||||||||| || ||||||||| | |||||| |||||    
T  30919427 tcaagttcaactcatttatctaacgagtttagttttcaactcaagttcgactcatttggttcgtaaaccaagttcaa 30919503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 326
Target Start/End: Original strand, 41449798 - 41449882
Alignment:
Q  242 atttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||| ||||||||||| ||||| |    ||||||||| |||| ||| |||||||  |||||||||||||| |||||| |||||    
T  41449798 atttggatcatgaaccaagttcaacgagataattgtcgaatcgagtttcgaactattgtcgagttggttcggatcattgtcagcc 41449882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 133; Significance: 6e-69; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 146 - 326
Target Start/End: Complemental strand, 3801547 - 3801367
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||||||||||||| |||||||||||| || |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3801547 atcgagtcatctcatgaacctaacgaatcgaaccatttatagttcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcattt 3801448  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||    
T  3801447 ggttcatgaaccaagttcaatgaaccaattgtcgagtcgaattacgaactatattcgagttggttcggttcattgccagcc 3801367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 155 - 326
Target Start/End: Complemental strand, 38523035 - 38522864
Alignment:
Q  155 tctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatga 254  Q
    ||||||||||| |||||||||||| ||||||| ||||||| || ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  38523035 tctcatgaacccaacgaatcgaaccatctatagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggctcatttggttcatga 38522936  T
Q  255 accaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||| ||||||||||||||| ||||||| ||||  |||||||||||||||||||||||||||||| |||||    
T  38522935 accaagttcaatggaccaattatcgagtcaaattacgaactatattcgagttggttcggttcattgccagcc 38522864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 31620825 - 31621005
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||  |||| |||||||||| ||||| ||| | ||| |||||| || ||||||||||||||||||||||| ||||||| ||||||  || |||     
T  31620825 atcgagccaagtcattaaccaaacgagtcgaattatatgtaactcaagttcagctcatttaattaacgaacttaatattcagctgaagttcaactcatta 31620924  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||| |||||    
T  31620925 ggttcatgaaccaaattcaatggactaattgtcgagtcgaatttcgaactatattcaagttggttcggttcattgtcagcc 31621005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 146 - 320
Target Start/End: Complemental strand, 32157120 - 32156955
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||||||||||||  |||||||||||| ||||||| ||||||| || |||||||||||||||||||||||||||| ||||||         |||    
T  32157120 atcgagtcatctcatgaacttaacgaatcgaaccatctatagttcaagttcagctcatttaattaacgaacttaattttcaactcaag---------ttt 32157030  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    || ||||||| ||| |||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||||||    
T  32157029 ggctcatgaaacaagttcaatggaccaattgtcaagtcgaattacgaactatattcgaattggttcggttcattg 32156955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 27906055 - 27906235
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    ||||||||||||||||| || ||| | ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  27906055 atcgagccatctcatgagcctaacaagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 27906154  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||| |||  |  | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  27906155 ggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 27906235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 160 - 326
Target Start/End: Original strand, 41783296 - 41783462
Alignment:
Q  160 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||||||||||  ||||||||  ||||| |||||| ||||||||||| |||||||||||||| || ||||||||||||||| ||||||||||||||||||    
T  41783296 tgaaccaaacgggtcgaactacatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcatttggttcatgaaccaa 41783395  T
Q  260 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
     ||||| | || ||||  |||||||| ||  ||||| |||||||||||  ||||||||||| |||||    
T  41783396 gttcaacgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgtcagcc 41783462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 160 - 319
Target Start/End: Complemental strand, 14500875 - 14500716
Alignment:
Q  160 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||||||||||| |||| |||| ||||| |||||| ||||||||| | |||||||||||||| || |||||||||||||||  |||||||||||||||||    
T  14500875 tgaaccaaacgagtcgagctatatataactcaagttcaactcattcagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaa 14500776  T
Q  260 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 319  Q
     ||||| | || |||| ||||||||| ||  ||||| |||||||||||  ||||||||||    
T  14500775 gttcaacgaactaattatcgagtcgagttccgaactgtattcgagttgtatcggttcatt 14500716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 146 - 325
Target Start/End: Original strand, 18880149 - 18880328
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||||||||| ||| ||||| | ||||||| | ||  |||||| || ||||||||||||||||||||||||||||||| |||| | |||  ||     
T  18880149 atcgagccatctcatgtacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgtta 18880248  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagc 325  Q
    |||||||||||||| ||||| |||  |  | ||||||||||| | |||||||| ||||||||||||||||||||| ||||    
T  18880249 ggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcagc 18880328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 160 - 326
Target Start/End: Original strand, 26218018 - 26218184
Alignment:
Q  160 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||||||||||| ||||||||| ||||| ||||||  |||||||||| |||||||||||||| || |||||||||||||||  |||||||||||||||||    
T  26218018 tgaaccaaacgagtcgaactatatataactcaagtttaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaa 26218117  T
Q  260 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
     ||||| | || ||||  |||||||| ||  ||||| |||| ||||||  ||||||||||| |||||    
T  26218118 gttcaacgaactaattaccgagtcgagttccgaactttatttgagttgtatcggttcattgccagcc 26218184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 157 - 326
Target Start/End: Complemental strand, 27450753 - 27450584
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| |||||| |  | || ||||||| ||||||||||| ||||||| ||||||||| | |||||||||| || ||| ||||||||||     
T  27450753 tcatgaaccaaacgagtcgaaccacatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaat 27450654  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||||| | | ||||| |||| |||||| | | ||||| |||||||||||||||||||||| |||||    
T  27450653 caaattcaacgaatcaattatcgaatcgaatctcgcactattttcgagttggttcggttcattgccagcc 27450584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 145 - 320
Target Start/End: Complemental strand, 1840871 - 1840696
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    |||||||||| || ||||||||| |||  |||||||| || |  |||||| || |||||||| || |||||||||||||||||||||||||| ||| |||    
T  1840871 tatcgagccagcttatgaaccaaccgagccgaactatatacatctcaagttcagctcatttatttcacgaacttaattttcagctcaagttcagctcatt 1840772  T
Q  245 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    ||||||||||||||| ||||| |    ||||||||| | || || ||||||||  |||||||||||||||||||||    
T  1840771 tggttcatgaaccaagttcaacgagttaattgtcgaattgagttctgaactattgtcgagttggttcggttcattg 1840696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 146 - 320
Target Start/End: Complemental strand, 20190767 - 20190594
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||||||||||||||||||| ||||||||  ||||  |||||| || |||| |||   | ||||||||||||| ||||||||||||||| ||||    
T  20190767 atcgagtcatctcatgaaccaaacgattcgaactacatatagctcaagttcagctcaattaggcagcgaacttaattttgagctcaagttcggctcattt 20190668  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||||||||||||| ||| ||| | ||||| |||| |||||||  ||||| || | |||||||||||||||||||    
T  20190667 ggttcatgaaccaagttcgatgaatcaattatcgaatcgaattacgaact-taatagagttggttcggttcattg 20190594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 157 - 326
Target Start/End: Original strand, 10493953 - 10494122
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| |||||||||   || ||||||| || |||||||| ||||||| ||||||||||| |||||||||| || ||||||||  |||||    
T  10493953 tcatgaaccaaacgagtcgaactatacttagttcaagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggtttgtgaac 10494052  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||| ||||| | ||||||| | || |||||| |  |||||| || ||||||||||||||||||| |||||    
T  10494053 caagttcaacgaaccaattattgaatcgaatatcaaactatttttgagttggttcggttcattgccagcc 10494122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 15933117 - 15933300
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaatt---ttcagctcaagttcggctta 242  Q
    ||||||| | |||||||||||||||| |||||| |||||||  |||||| |  |||||||| ||||||||||||||    || |||||| ||||  || |    
T  15933117 atcgagctaactcatgaaccaaacgagtcgaaccatctatagctcaagttcggctcatttatttaacgaacttaatagtatttagctcatgttcaactca 15933216  T
Q  243 tttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    || |||||||||||||| ||||| | |  || ||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  15933217 ttaggttcatgaaccaagttcaacgaattaactgtcgagtcgaatttcgaactatactcgagttggttcggttcattgccagcc 15933300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 39407374 - 39407536
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| |||||| || | || ||||||| ||||||||||| ||||||| ||||||||| | |||||||||| || ||| ||||||||||     
T  39407374 tcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaat 39407473  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 319  Q
    ||| ||||| | | ||||| |||| |||||| | | ||||| || ||||||||||||||||||    
T  39407474 caagttcaacgaatcaattatcgaatcgaatctcgcactatttttgagttggttcggttcatt 39407536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 153 - 326
Target Start/End: Original strand, 20188937 - 20189110
Alignment:
Q  153 catctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 252  Q
    |||||| |||||||||||| ||||||||  ||||  |||||| || |||| ||| || |||||||||||||| || |||||||||||| |||||||||||    
T  20188937 catctcgtgaaccaaacgagtcgaactacatatagctcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcat 20189036  T
Q  253 gaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||| ||| | | | ||||| |||| || ||||  ||||| || |||||||| |||||||||||| |||||    
T  20189037 gaaccaagttcgacgaatcaattatcgaatcaaattacgaactctaatcgagttgattcggttcattgtcagcc 20189110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 189 - 326
Target Start/End: Original strand, 27196077 - 27196214
Alignment:
Q  189 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 288  Q
    |||||| |||||| ||||  |||||| ||||||||||| |||||||||| || ||||||||||||||||||||| || | | ||||| |||| |||| |     
T  27196077 tcaagttcaactcctttatctaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaatttaacgaatcaattatcgaatcgagtc 27196176  T
Q  289 ttgaactatattcgagttggttcggttcattggcagcc 326  Q
    | ||||||| |||||||||||||||||||||| |||||    
T  27196177 tcgaactattttcgagttggttcggttcattgtcagcc 27196214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 157 - 317
Target Start/End: Complemental strand, 30661079 - 30660919
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| ||||||||| |||| |||| || | |||||| |||||||| ||||||||||||| || || ||| ||| |||| ||||||||||    
T  30661079 tcatgaaccaaacgagtcgaactatatatagttcatgttcgactcatataattaacaaacttaattttcaacttaaattcagctcatttagttcatgaac 30660980  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttca 317  Q
     || ||||||  | ||||| |||| |||| |||| ||||| ||||||||||||||| ||||    
T  30660979 taagttcaataaatcaattatcgaatcgagttttaaactaaattcgagttggttcgattca 30660919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 157 - 326
Target Start/End: Complemental strand, 34719829 - 34719660
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| |||||| || | || ||||||| ||||||||||| ||||||| ||||||||| | |||||||||| || |||  |||||||||     
T  34719829 tcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaagttcatgaat 34719730  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||| ||||| | | ||||| |||| || ||| | | ||||| |||||||||||||| ||||||| |||||    
T  34719729 caagttcaacgaatcaattatcgaatcaaatctcgcactattttcgagttggttcgtttcattgccagcc 34719660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 162 - 302
Target Start/End: Complemental strand, 11136173 - 11136034
Alignment:
Q  162 aaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaat 261  Q
    |||||||||| ||||||||| ||||| |||||| ||||||||||| |||||||||||||| || |||||||||||||||  |||||||| |||||||| |    
T  11136173 aaccaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttc-tgaaccaagt 11136075  T
Q  262 tcaatggaccaattgtcgagtcgaattttgaactatattcg 302  Q
    |||| | || ||||  |||||||| ||  ||||| ||||||    
T  11136074 tcaacgaactaattaccgagtcgagttccgaactttattcg 11136034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 19282298 - 19282178
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    |||||| ||| |||||||| ||| ||| ||||||||| || | ||||||| || ||||| || ||||||||| ||||||||||||||||||| ||| |||    
T  19282298 tatcgaaccagctcatgaatcaaccgagtcgaactatatacagttcaagttcagctcatctacttaacgaacctaattttcagctcaagttcagctcatt 19282199  T
Q  245 tggttcatgaaccaaattcaa 265  Q
    ||||||||||||||| |||||    
T  19282198 tggttcatgaaccaagttcaa 19282178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 156 - 320
Target Start/End: Original strand, 31021830 - 31021994
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    |||||||| |||||||  |||||||| ||||  | || | || |||||||| ||||| ||||||||||  ||||||| ||| ||| ||||||||||||||    
T  31021830 ctcatgaatcaaacgagacgaactatgtatagcttaaattcagctcatttagttaacaaacttaatttcaagctcaaattcagctcatttggttcatgaa 31021929  T
Q  256 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    ||||| |||| |    |||| ||||||||| ||  ||||||||||||||||||||||||||||||    
T  31021930 ccaaactcaacgagttaattatcgagtcgagttccgaactatattcgagttggttcggttcattg 31021994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 199 - 326
Target Start/End: Original strand, 29328054 - 29328180
Alignment:
Q  199 ctcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactata 298  Q
    |||||||||||||||||||||||||||||||||||| | || | || |||||||||| ||| ||||| |||  || | ||||||||||| | ||||||||    
T  29328054 ctcatttaattaacgaacttaattttcagctcaagtccagc-tgttaggttcatgaatcaagttcaacggattaaatatcgagtcgaatgtcgaactata 29328152  T
Q  299 ttcgagttggttcggttcattggcagcc 326  Q
     ||||||| ||||||||||||| |||||    
T  29328153 atcgagtttgttcggttcattgtcagcc 29328180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 157 - 326
Target Start/End: Original strand, 26298279 - 26298448
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| |||||| || | || || |||| ||||||||||| ||||||| ||||||||| | |||||||| | || ||| ||||||||||     
T  26298279 tcatgaaccaaacgagtcgaaccatatttagtttaagttcaactcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaat 26298378  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||| ||||| | | ||||| |||| |||||| |   ||||| || ||||||||||||||||||| |||||    
T  26298379 caagttcaacgaatcaattatcgaatcgaatctcacactatttttgagttggttcggttcattgccagcc 26298448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 319
Target Start/End: Original strand, 2675987 - 2676146
Alignment:
Q  160 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||||||||||| ||||| ||  |||| ||||||| ||| | | ||| || ||||||||||||||||||||||||||| || |||||||||||||||| |    
T  2675987 tgaaccaaacgagtcgaattacatatagttcaagttcaatttaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccta 2676086  T
Q  260 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 319  Q
     ||| | | | |||||||||  |||||||  ||||| || |||| |||||| ||||||||    
T  2676087 gttcgacgaatcaattgtcggatcgaattacgaactttaatcgaattggtttggttcatt 2676146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 155 - 326
Target Start/End: Complemental strand, 32945195 - 32945024
Alignment:
Q  155 tctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatga 254  Q
    |||||||||| |||||| | |||||||  |||| || ||| |  |||||||| || |||| |||||||||   |||||||||| || |||||||||||||    
T  32945195 tctcatgaacaaaacgagttgaactatgcataactccagttcggctcatttatttgacgagcttaatttttgactcaagttcgactcatttggttcatga 32945096  T
Q  255 accaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||| || || | | |||||  ||| |||| ||| ||||||| |||||||||||||||||||||| |||||    
T  32945095 accaagtttaacgaatcaattaccgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcc 32945024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 26299815 - 26299977
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||| ||||||| |||||| || | || ||||||| ||| ||||||| ||||||| ||||||||| | |||||||| | || ||| ||||||||||     
T  26299815 tcatgaatcaaacgagtcgaaccatatttagttcaagttcaattcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaat 26299914  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 319  Q
     || ||||| | | ||||| |||| |||||| | | ||||| |||||||||||||||||||||    
T  26299915 gaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgagttggttcggttcatt 26299977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 199 - 310
Target Start/End: Complemental strand, 40056493 - 40056382
Alignment:
Q  199 ctcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactata 298  Q
    |||||||| ||||||||||||||||||| ||||| ||   ||||||||||||||||||||||||||| |    ||||||||| ||||||||  ||||||     
T  40056493 ctcatttatttaacgaacttaattttcatctcaaatttaacttatttggttcatgaaccaaattcaacgagataattgtcgaatcgaatttcaaactatt 40056394  T
Q  299 ttcgagttggtt 310  Q
     |||||||||||    
T  40056393 atcgagttggtt 40056382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 39409108 - 39409206
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    ||||||||||||||| |||||| || | || ||||||| ||||||||||| ||||||| ||||||||| | |||||||||| || ||| ||||||||||    
T  39409108 tcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaa 39409206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 34723825 - 34723717
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| |||||| || | || ||||||| ||||||||||| ||||||| ||||||||| | ||||| |||| || ||| ||||||||||     
T  34723825 tcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaaattcgactcattaggttcatgaat 34723726  T
Q  257 caaattcaa 265  Q
    ||| |||||    
T  34723725 caagttcaa 34723717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 157 - 320
Target Start/End: Original strand, 34857315 - 34857478
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| |||||| || | || || ||||  |||||||||| ||||||| ||||||||| | |||||||||| || ||| | ||||||||     
T  34857315 tcatgaaccaaacgagtcgaaccatatttagtttaagtttaactcatttatttaacgagcttaattttaaactcaagttcgactcattagattcatgaat 34857414  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    ||| ||||| | | ||||| | || | |||| |   ||||| ||||||||||||||||||||||    
T  34857415 caagttcaacgaatcaattattgaattgaatctcacactattttcgagttggttcggttcattg 34857478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 43386694 - 43386769
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctca 231  Q
    |||||||||||||||| | |||| |||||||| |||||| ||| ||||||| |||| |||||||||||||||||||    
T  43386694 ctcatgaaccaaacgagttgaaccatctataactcaagttcaattcatttatttaaagaacttaattttcagctca 43386769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 326
Target Start/End: Original strand, 19716151 - 19716315
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| || ||| || | || ||||||| ||| ||||||| ||||||| ||||||||| | || ||||||| || ||| ||||||||||     
T  19716151 tcatgaaccaaacgagtcaaaccatatttagttcaagttcaattcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcatgaat 19716250  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||| ||||| | | |||||      |||||| | | ||||| |||||||||||||||||||||| |||||    
T  19716251 caagttcaacgaatcaatt-----atcgaatctcgcactattttcgagttggttcggttcattgccagcc 19716315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 319
Target Start/End: Original strand, 39414140 - 39414312
Alignment:
Q  147 tcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagc-tcaagttcggcttattt 245  Q
    |||||||| ||||||||||||  || |||| |||| ||||| |||||| || |||||||| ||||||||||||||||| | | | |||||| ||| |||     
T  39414140 tcgagccagctcatgaaccaattgagtcga-ctatatataactcaagttcagctcatttatttaacgaacttaatttttaacttaaagttcagctcatta 39414238  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 319  Q
    |||||||| ||||| ||||| |    ||||||||| |  | ||| |||||||  ||||||||||||||||||||    
T  39414239 ggttcatggaccaagttcaacgagttaattgtcgaattaagtttcgaactattgtcgagttggttcggttcatt 39414312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 196 - 320
Target Start/End: Complemental strand, 34724887 - 34724763
Alignment:
Q  196 caactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaact 295  Q
    ||||||||||| ||||||| ||||||||| | |||||||||| || ||| |||||||||| ||| ||||| | | ||||| || | |||||| |   |||    
T  34724887 caactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcaaatcgaatctcacact 34724788  T
Q  296 atattcgagttggttcggttcattg 320  Q
    || ||| ||||||||||||||||||    
T  34724787 attttcaagttggttcggttcattg 34724763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 156 - 326
Target Start/End: Original strand, 10327897 - 10328067
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    ||||||||| |||||| |||||||||  |||  ||||||  || ||||||| ||  |||  ||||| |||  |||||||| |  | ||||||||||||||    
T  10327897 ctcatgaacaaaacgagtcgaactatacatagctcaagtttaattcatttatttgtcgagtttaatattcgactcaagtttgattcatttggttcatgaa 10327996  T
Q  256 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
     ||| ||||| | | |||||  ||| |||| |||||||| || |||||||||||||||||||||| |||||    
T  10327997 tcaagttcaacgaatcaattaccgaatcgagttttgaacaattttcgagttggttcggttcattgtcagcc 10328067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 157 - 320
Target Start/End: Original strand, 36523719 - 36523886
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaac----gaacttaattttcagctcaagttcggcttatttggttcat 252  Q
    |||||||||||||||||| ||||||  |||  |||||| || |||||||| |||||     ||||||||||| |  ||||||||| || |||||||||||    
T  36523719 tcatgaaccaaacgaatcaaactatacatagctcaagttcagctcatttatttaacaaattaacttaatttttaaatcaagttcgactcatttggttcat 36523818  T
Q  253 gaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    ||||||| ||||||| | | ||| |||| || | | | | ||| ||||||||||  ||||||||||||    
T  36523819 gaaccaagttcaatgaatctattatcgaatcaagtctcggactttattcgagttaattcggttcattg 36523886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 4983475 - 4983402
Alignment:
Q  160 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaag 233  Q
    |||||||||||||| ||||||  ||||| |||||| |||||| |||| |||||||||||||| || ||||||||    
T  4983475 tgaaccaaacgaattgaactacatataactcaagttcaactcctttagttaacgaacttaatctttagctcaag 4983402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 288
Target Start/End: Original strand, 1225318 - 1225450
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    |||||||||||||||| ||||| |||   || ||||||| |   ||||||| || |||| ||||||||||| |||||||||| || ||||||||||| ||    
T  1225318 ctcatgaaccaaacgagtcgaattatacgtagttcaagttcggttcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcataaa 1225417  T
Q  256 ccaaattcaatggaccaattgtcgagtcgaatt 288  Q
    | || ||||| | | ||||| |||| |||||||    
T  1225418 ctaagttcaacgaaacaattatcgaatcgaatt 1225450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 224
Target Start/End: Original strand, 3457793 - 3457861
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaatttt 224  Q
    |||||||||||||||| ||  ||||| ||||  |||||| ||||||||||| |||||||||||||||||    
T  3457793 ctcatgaaccaaacgagtcagactatatatagctcaagtccaactcatttatttaacgaacttaatttt 3457861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 30051422 - 30051502
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcg 237  Q
    |||||||| |||||| ||||||||| |||| |||| || | |||||| |||||||| ||||||||||||| ||||| ||||    
T  30051422 tcatgaactaaacgagtcgaactatatatagttcatgttcgactcatataattaacaaacttaattttcatctcaaattcg 30051502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 24536014 - 24536083
Alignment:
Q  196 caactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaa 265  Q
    |||||| |||| ||||||||||||||||| ||||||| ||  ||| ||||| ||||||||||| ||||||    
T  24536014 caactcgtttatttaacgaacttaattttgagctcaaatttagctcatttgattcatgaaccagattcaa 24536083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 28246731 - 28246798
Alignment:
Q  188 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    ||||||| ||||||||||| |||| ||  |||||||||| |||||||||| || ||||||||| ||||    
T  28246731 ttcaagttcaactcatttatttaatgagtttaattttcaactcaagttcgactcatttggttcgtgaa 28246798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 320
Target Start/End: Complemental strand, 27876180 - 27876104
Alignment:
Q  244 ttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    ||||||||||||| || ||||||| | ||||||| ||||| ||  | ||||| | ||| ||||||||||||||||||    
T  27876180 ttggttcatgaacgaagttcaatgaatcaattgttgagtcaaacctcgaactttgttcaagttggttcggttcattg 27876104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 144 - 320
Target Start/End: Complemental strand, 124666 - 124490
Alignment:
Q  144 atatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttat 243  Q
    ||||| || ||||||||||||||||||||||||| |||||||| ||||| | || |||||||||||||| ||||||||  |||||||||||||| || ||    
T  124666 atatcaagtcatctcatgaaccaaacgaatcgaaatatctatagttcaaattcagctcatttaattaacaaacttaataatcagctcaagttcgactcat 124567  T
Q  244 ttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  124566 ttggttcatgaaccaagttcaatggaccaattgtcgagtcaaatttcgaactatattcgagttggttcggttcattg 124490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 1e-42; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 146 - 326
Target Start/End: Complemental strand, 24470000 - 24469820
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  24470000 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 24469901  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||| |||  || | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  24469900 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 24469820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 35810675 - 35810855
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| |||||| |||||||||||| ||||||||  |||| ||||||| |  |||| ||| || |||||||||||||||||||||||||||||| ||||    
T  35810675 atcgagtcatctcgtgaaccaaacgagtcgaactacatatagttcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcattt 35810774  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||| | | |||||||||| |||||||  ||||| || ||||||||||||||||||||| |||||    
T  35810775 ggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacgaactttaatcgagttggttcggttcattgccagcc 35810855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 146 - 326
Target Start/End: Complemental strand, 47603045 - 47602865
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  47603045 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 47602946  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||| |||  || | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  47602945 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcagcc 47602865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 153 - 326
Target Start/End: Original strand, 32179822 - 32179995
Alignment:
Q  153 catctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 252  Q
    ||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | ||| ||| |||| ||    
T  32179822 catctcatgaaccgaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggtttat 32179921  T
Q  253 gaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||| ||||| |||  || | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  32179922 gaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 32179995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 36419058 - 36419238
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||||||||||||| ||||| ||||||||| | ||  |||||| || ||||||||||||||||||||||||||| |||||||| | ||| |||     
T  36419058 atcgagtcatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcggctcaagtccagctcatta 36419157  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||| | |||  || | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  36419158 ggttcatgaaccaagttcgacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 36419238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 157 - 320
Target Start/End: Complemental strand, 40159802 - 40159639
Alignment:
Q  157 tcatgaaccaaacgaatcgaactat-ctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    ||||||||||||||| |||||| || ||| | ||||||| ||||||||||| ||||||||||||||||||| |||||||||| || ||||| ||||||||    
T  40159802 tcatgaaccaaacgagtcgaaccatacta-agttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttgattcatgaa 40159704  T
Q  256 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||| | ||||| ||||||| |||| |||||| |  |||||| ||||||||||||||||||||||    
T  40159703 ccaagtccaatgaaccaattatcgaatcgaatatcaaactattttcgagttggttcggttcattg 40159639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 146 - 321
Target Start/End: Original strand, 7596350 - 7596525
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||||||||||| ||||||| ||||||||  |||| ||||||| || |||| ||| ||| ||||||||||||||||||||||||||||| ||||    
T  7596350 atcgagtcatctcatgaatcaaacgagtcgaactacatatagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcattt 7596449  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattgg 321  Q
    ||||||| |||||| ||| | | | ||||| |||| || ||||  ||||| || ||||||||||||||||||||||    
T  7596450 ggttcataaaccaagttcgacgaatcaattatcgaatcaaattacgaactctaatcgagttggttcggttcattgg 7596525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 146 - 320
Target Start/End: Original strand, 20347625 - 20347797
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| || || ||||||||||||| ||||| |||  ||| | ||| | || |||||||||||||||||||||||||||| || |||||||||| ||||    
T  20347625 atcgagtcaactgatgaaccaaacgagtcgaattat--atagtacaaattcagctcatttaattaacgaacttaattttcatcttaagttcggctcattt 20347722  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    ||| |||||| ||||||||| | |  |||||||||||| |||||| |||||||||||||||| ||||||||||||    
T  20347723 ggtacatgaatcaaattcaacgaattaattgtcgagtcaaattttaaactatattcgagttgattcggttcattg 20347797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 146 - 320
Target Start/End: Complemental strand, 42916297 - 42916123
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||||||||||||||||||| |||| |||| |||  ||||||| || |||| ||| ||| ||||||||||||||||||||||||||||| ||||    
T  42916297 atcgagtcatctcatgaaccaaacgagtcgacctatatatggttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcattt 42916198  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||||||||||||| ||| | | | ||||| |||| |||||||  ||||  || |||| ||||||||||||||||    
T  42916197 ggttcatgaaccaagttcgacgaatcaattatcgaatcgaattacgaacactaatcgaattggttcggttcattg 42916123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 146 - 320
Target Start/End: Complemental strand, 46265127 - 46264953
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||||||||||||||||||| |||| |||| |||| ||||||| || |||| ||| ||| ||||||||||||||||||||||||||||| ||||    
T  46265127 atcgagtcatctcatgaaccaaacgagtcgacctatatatagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcattt 46265028  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
     ||||||||||||| ||| | | | ||||| |||| |||||||  ||||  || |||| ||||||||||||||||    
T  46265027 agttcatgaaccaagttcgacgaatcaattatcgaatcgaattacgaacactaatcgaattggttcggttcattg 46264953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 20349116 - 20349277
Alignment:
Q  159 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaacca 258  Q
    ||||||||||||| ||||| ||| |||| ||||| | || |||||||||||||||||||||||||||| || |||||||||| |||||||  ||||| ||    
T  20349116 atgaaccaaacgagtcgaattatatatagttcaaattcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatca 20349215  T
Q  259 aattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    | ||||| | |  |||| ||||||| |||||| |||||| ||||||||||||||||||||||    
T  20349216 agttcaacgaattaattatcgagtcaaattttaaactatgttcgagttggttcggttcattg 20349277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 160 - 326
Target Start/End: Complemental strand, 43087635 - 43087469
Alignment:
Q  160 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||| || || ||||||||||||  |||||||||||||||||    
T  43087635 tgaaccaaacgaatcgaactatatataactcaagttcaactcatttaattaacgaacttaatctttagttcaagttcggctcgtttggttcatgaaccaa 43087536  T
Q  260 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
     |||||   || ||||  |||||||| ||  ||||| ||||| |||||  || |||||||| |||||    
T  43087535 gttcaacaaactaattaccgagtcgagttccgaactttattcaagttgtatcagttcattgtcagcc 43087469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 159 - 320
Target Start/End: Complemental strand, 45653601 - 45653441
Alignment:
Q  159 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaacca 258  Q
    ||||| ||||||| ||||||||| |||| |||| || ||  |||||||  |||||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  45653601 atgaatcaaacgagtcgaactatatatagttcatgttcagttcatttagctaacgaacttaacttttagctcaagttcggctcatttggttcatgaacca 45653502  T
Q  259 aattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    | ||||| | |  ||||||||| |||| ||||||||||| |||||||||| |||||||||||    
T  45653501 agttcaacgaaataattgtcgaatcgagttttgaactattttcgagttgg-tcggttcattg 45653441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 160 - 320
Target Start/End: Original strand, 19508499 - 19508659
Alignment:
Q  160 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||||||||| | ||||||||| ||||| |||||  ||||||||||| |||||||||||||| || |||||||||||||||  |||||||||||||||||    
T  19508499 tgaaccaaacaagtcgaactatatataactcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaa 19508598  T
Q  260 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
     ||||| | || ||||  |||||||| ||  ||||| |||||||||||  |||||||||||    
T  19508599 gttcaacgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattg 19508659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 145 - 320
Target Start/End: Complemental strand, 23915781 - 23915606
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    |||||||||| ||||| |||||| ||| ||||||||| || || |||||| ||||||||||| |||| ||||||||||||||||| |||||| ||| |||    
T  23915781 tatcgagccaactcattaaccaatcgagtcgaactatatacaactcaagttcaactcatttatttaatgaacttaattttcagctaaagttcagctcatt 23915682  T
Q  245 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    ||||||||||||||| ||||| |    |||||| || |||| ||| ||||| |  ||||||||||||| |||||||    
T  23915681 tggttcatgaaccaagttcaacgagataattgttgaatcgagtttcgaacttttgtcgagttggttcgattcattg 23915606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 145 - 326
Target Start/End: Original strand, 15306449 - 15306630
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    ||||||| || |||||||||||| ||| ||||||||| || |  |||||| |  |||||||| |||| ||||||||||||| |||||||||| ||| |||    
T  15306449 tatcgagtcagctcatgaaccaatcgagtcgaactatatacagctcaagttcggctcatttatttaatgaacttaattttccgctcaagttcagctcatt 15306548  T
Q  245 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||||||||||| ||||||| |  |||| |||| |||| ||  |||||||  || |||||||||||||||||| |||||    
T  15306549 tggttcatgaaccaagttcaatgaattaattatcgaatcgagttccgaactattgtcaagttggttcggttcattgccagcc 15306630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 153 - 326
Target Start/End: Complemental strand, 25125061 - 25124888
Alignment:
Q  153 catctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 252  Q
    |||||| ||||||||||||   ||||||  ||||  |||||| || |||| ||| || ||||| |||||||||||||||||||||||| |||||||||||    
T  25125061 catctcgtgaaccaaacgagctgaactacatatagctcaagttcagctcaattagttcacgaaattaattttcagctcaagttcggctcatttggttcat 25124962  T
Q  253 gaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||| ||||| | | ||||| || | |||||||  ||||| || ||||||||||||||||||||| |||||    
T  25124961 gaaccaagttcaacgaatcaattatcaaatcgaattacgaactttaatcgagttggttcggttcattgccagcc 25124888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 157 - 326
Target Start/End: Complemental strand, 29677691 - 29677522
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||| ||||||| |||||||||   || ||||||| || |||||||| |||| || ||||||||||| |||||||||| || ||||||||| |||||    
T  29677691 tcatgaagcaaacgagtcgaactatacttagttcaagttcagctcatttatttaaagagcttaattttcaactcaagttcgactcatttggttcgtgaac 29677592  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||| ||||| | ||||||| || | |||| | | ||||||| |||||||||||||||||||||| |||||    
T  29677591 caagttcaacgaaccaattatcaaatcgagtatcgaactattttcgagttggttcggttcattgccagcc 29677522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 7702792 - 7702972
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    ||||||| |||||||||||| ||||| | ||| |||   ||  | |||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  7702792 atcgagctatctcatgaacctaacgagtagaattatgcgtagcttaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 7702891  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    | |||||||||||| ||||| |||  || | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  7702892 gcttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 7702972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 23916767 - 23916947
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| |||||| |||||||||||| ||||||||  |||   |||||| || |||| ||| || ||||||||||||||||||||||||| |||| ||||    
T  23916767 atcgagtcatctcgtgaaccaaacgagtcgaactacatattgctcaagttcagctcaattagttgacgaacttaattttcagctcaagttaggctcattt 23916866  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||| ||||||||| ||  ||| | ||||| |||| |||||||  ||||| || ||||||||||| ||||||||| |||||    
T  23916867 ggttaatgaaccaagtttgatgaatcaattatcgaatcgaattacgaactttaatcgagttggtttggttcattgtcagcc 23916947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 146 - 326
Target Start/End: Complemental strand, 37441369 - 37441189
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| |||||||| |||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  37441369 atcgagacatctcattaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 37441270  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||| |||  |  | |||||| |||| | |||||||| || ||||| |||||||||||| |||||    
T  37441269 ggttcatgaaccaagttcaacggattagatatcgagttgaatgtcgaactataatctagttgattcggttcattgccagcc 37441189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 194 - 326
Target Start/End: Original strand, 44596522 - 44596654
Alignment:
Q  194 tacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaa 293  Q
    ||||||||||||| |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||| |    ||||||||| |||| ||   ||    
T  44596522 tacaactcatttatttaacgaacttaattttcagttcaagttcagctcatttggttcatgaaccaaattcaacgagttaattgtcgaatcgagttccaaa 44596621  T
Q  294 ctatattcgagttggttcggttcattggcagcc 326  Q
    ||||  ||||||||||||||||||||| |||||    
T  44596622 ctattgtcgagttggttcggttcattgccagcc 44596654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 147 - 326
Target Start/End: Complemental strand, 13645362 - 13645183
Alignment:
Q  147 tcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttg 246  Q
    ||||||||  |||||||||||| || ||||||||| ||||| |||| | ||||||||||| |||||||||||||| || |||||||||||||||  ||||    
T  13645362 tcgagccagttcatgaaccaaatgagtcgaactatatataactcaaattcaactcatttacttaacgaacttaatctttagctcaagttcggctcgtttg 13645263  T
Q  247 gttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
     |||||||||||| || |||| || ||||  |||||||| ||   |||| ||||| |||||  | |||||||||||||||    
T  13645262 attcatgaaccaagttaaatgaactaattaccgagtcgagttccaaactttattcaagttgtcttggttcattggcagcc 13645183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 189 - 320
Target Start/End: Original strand, 28006350 - 28006481
Alignment:
Q  189 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 288  Q
    |||||| | ||||||||| ||||||| ||||||||||| |||||||||| || |||||||||||||||||| ||||| |   ||||| |||| ||||||     
T  28006350 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatc 28006449  T
Q  289 ttgaactatattcgagttggttcggttcattg 320  Q
    | ||||||| ||||||||||||||||||||||    
T  28006450 tcgaactattttcgagttggttcggttcattg 28006481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 157 - 319
Target Start/End: Complemental strand, 5204641 - 5204479
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| |||||| ||    ||||||||| | ||||||||| ||||||||||||||||||| |||||||||| || |||||||||| ||||    
T  5204641 tcatgaaccaaacgagtcgaaccatactcaattcaagttcgactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcacgaac 5204542  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 319  Q
    ||| ||||| |   ||||| |||| |||||| |  |||||| |||||||||||||| ||||||    
T  5204541 caagttcaacgagtcaattatcgaatcgaatctcaaactattttcgagttggttcgattcatt 5204479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 15257304 - 15257174
Alignment:
Q  196 caactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaact 295  Q
    ||||||||||| ||||||| ||||||||||| |||||||||| || |||||||||||||||||| | ||||| ||||||| |||| |||| | |  ||||    
T  15257304 caactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcaaact 15257205  T
Q  296 atattcgagttggttcggttcattggcagcc 326  Q
    || || ||||||||||||||||||| |||||    
T  15257204 atttttgagttggttcggttcattgtcagcc 15257174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 153 - 326
Target Start/End: Original strand, 42937038 - 42937211
Alignment:
Q  153 catctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 252  Q
    |||||| |||||||||||| | |||||||  |||  |||||| || |||| ||| || |||||||||||||| ||||||||||||||| ||||| |||||    
T  42937038 catctcgtgaaccaaacgagttgaactatacatagctcaagttcagctcaattagttgacgaacttaattttaagctcaagttcggctcatttgattcat 42937137  T
Q  253 gaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||| ||| | | | ||||||| || |||||||  ||||| || |||||||||||| |||||||| |||||    
T  42937138 gaaccaagttcgacgaatcaattgttgaatcgaattacgaactctaatcgagttggttcagttcattgccagcc 42937211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 31869550 - 31869670
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    |||||||||| |||||||||||| ||| ||||| ||| || |  |||||| |  |||||||| |||||||||||||||||||||| |||||||||| |||    
T  31869550 tatcgagccagctcatgaaccaaccgagtcgaattatatacagctcaagttcggctcatttatttaacgaacttaattttcagcttaagttcggctcatt 31869649  T
Q  245 tggttcatgaaccaaattcaa 265  Q
    ||||||||||||||| |||||    
T  31869650 tggttcatgaaccaagttcaa 31869670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 326
Target Start/End: Complemental strand, 14578703 - 14578588
Alignment:
Q  211 acgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggtt 310  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||| |||||   | |||||||| | |||||||  ||||| || |||||||||||    
T  14578703 acgaacttaattttcagctccagttcggctcatttggttcatgaaccaagttcaacaaatcaattgtctaatcgaattacgaactctaatcgagttggtt 14578604  T
Q  311 cggttcattggcagcc 326  Q
    |||||||||| |||||    
T  14578603 cggttcattgtcagcc 14578588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 156 - 326
Target Start/End: Complemental strand, 39802940 - 39802770
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    ||||||||||||||||||||| ||||  |||  |||||| |  |||||||| ||||||||||||||||||| |||||||||| || ||||||||||||||    
T  39802940 ctcatgaaccaaacgaatcgagctatacatagctcaagttcggctcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaa 39802841  T
Q  256 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||  ||||| | |  || || |||  ||| | | ||||||| |||||||||||||| ||||||| |||||    
T  39802840 ccatgttcaacgaattaactgccgaaccgagtctcgaactattttcgagttggttcgattcattgccagcc 39802770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 188 - 326
Target Start/End: Original strand, 50447340 - 50447478
Alignment:
Q  188 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 287  Q
    ||||||| ||||||||||| ||||||||||||||||| || |||||||||||| ||||||||||| |||||| || || | |  |||| |||| |||| |    
T  50447340 ttcaagttcaactcatttatttaacgaacttaattttaagttcaagttcggctcatttggttcataaaccaagtttaacgaattaattatcgaatcgagt 50447439  T
Q  288 tttgaactatattcgagttggttcggttcattggcagcc 326  Q
     | ||||||| |||||||||||| ||||||||| |||||    
T  50447440 ctcgaactattttcgagttggtttggttcattgtcagcc 50447478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 145 - 326
Target Start/End: Original strand, 36119028 - 36119208
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    |||||||||| |||||||||||||||||||||| ||| |||| ||||||| || ||| |||| ||||| ||||| | ||| | ||||||||| | | |||    
T  36119028 tatcgagccaactcatgaaccaaacgaatcgaattatatatagttcaagttcagctcgtttagttaacaaacttca-tttgaactcaagttcagttcatt 36119126  T
Q  245 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||| |||||| ||| | |    ||||||||| |||||||| ||||||| ||  |||||||||||||||||| |||||    
T  36119127 tggttcataaaccaagttcgacgagaaaattgtcgaatcgaatttcgaactattttttagttggttcggttcattgtcagcc 36119208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 157 - 326
Target Start/End: Complemental strand, 38061350 - 38061181
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| |||||| || | || ||||||| ||||||||||| ||||||| ||||||||| | || ||||||| || ||| ||||||| ||     
T  38061350 tcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcataaat 38061251  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||| ||||| | | ||||| || | |||||| | | ||||| |||||||||||||||||||||| |||||    
T  38061250 caagttcaacgaatcaattatcaaatcgaatctcgcactattttcgagttggttcggttcattgccagcc 38061181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 320
Target Start/End: Original strand, 7956323 - 7956455
Alignment:
Q  188 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 287  Q
    ||||||| ||||||||||| ||||| | |||||||||||  ||||||||| || |||| ||||||||||||| | ||||| ||||||| |||| | || |    
T  7956323 ttcaagttcaactcatttatttaacaagcttaattttcaattcaagttcgactaattttgttcatgaaccaagtccaatgaaccaattatcgaattgagt 7956422  T
Q  288 tttgaactatattcgagttggttcggttcattg 320  Q
     | ||||||| ||||||||||||||||||||||    
T  7956423 atcgaactattttcgagttggttcggttcattg 7956455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 159 - 326
Target Start/End: Complemental strand, 45581178 - 45581011
Alignment:
Q  159 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaacca 258  Q
    ||||||||||||| |||||| || ||||  | | || || |||||||| |||| ||||||||||||| ||||||||||  || |||||||||||||||||    
T  45581178 atgaaccaaacgagtcgaaccatatatagctaatgttcatctcatttagttaatgaacttaattttccgctcaagttcaactcatttggttcatgaacca 45581079  T
Q  259 aattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    | ||||| |    |||| |||| |||| ||| ||||||| ||| |||||||||||||||||| |||||    
T  45581078 agttcaacgagataattatcgaatcgagtttcgaactattttcaagttggttcggttcattgtcagcc 45581011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 220 - 326
Target Start/End: Complemental strand, 12224684 - 12224578
Alignment:
Q  220 attttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 319  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||| |    ||||||||| |||||||  |||||||  ||||||||||||||||||||    
T  12224684 attttcagctcaagttcggctcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgaattccgaactattgtcgagttggttcggttcatt 12224585  T
Q  320 ggcagcc 326  Q
    | |||||    
T  12224584 gtcagcc 12224578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 199 - 320
Target Start/End: Original strand, 15014325 - 15014446
Alignment:
Q  199 ctcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactata 298  Q
    |||| |||||| | |||||||||||||| ||||||||||||| |||||||||||||| ||| ||| | | | ||||| |||| |||||||  ||||| ||    
T  15014325 ctcaattaattgatgaacttaattttcaactcaagttcggctcatttggttcatgaatcaagttcgacgaatcaattatcgaatcgaattacgaactcta 15014424  T
Q  299 ttcgagttggttcggttcattg 320  Q
     |||||||||||||||||||||    
T  15014425 atcgagttggttcggttcattg 15014446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 189 - 326
Target Start/End: Original strand, 24575909 - 24576046
Alignment:
Q  189 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 288  Q
    |||||| | ||||||||| ||||| | ||||||||||| ||||||||||  | |||||||||||||||||| ||||| |   ||||| |||| || |||     
T  24575909 tcaagttcgactcatttatttaacaagcttaattttcaactcaagttcgtttcatttggttcatgaaccaagttcaacgagtcaattatcgaatcaaatc 24576008  T
Q  289 ttgaactatattcgagttggttcggttcattggcagcc 326  Q
    | ||||||| |||||||||||||||||||||| |||||    
T  24576009 tcgaactattttcgagttggttcggttcattgtcagcc 24576046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 155 - 320
Target Start/End: Original strand, 31816534 - 31816699
Alignment:
Q  155 tctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatga 254  Q
    |||| |||||||||||| ||||| |||| |||| |||||| |  |||||||| || |||| ||||||||||  || ||||||  || |||||||||||||    
T  31816534 tctcgtgaaccaaacgagtcgaattatccataactcaagttcggctcatttatttgacgagcttaattttcgactgaagttcaactcatttggttcatga 31816633  T
Q  255 accaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    ||||| ||||| | | |||||  ||| | || ||| ||||||| ||||||||||||||||||||||    
T  31816634 accaagttcaacgaatcaattaccgaattgagtttcgaactattttcgagttggttcggttcattg 31816699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 320
Target Start/End: Original strand, 47983223 - 47983386
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| |||||| ||   ||| | |||| ||||||||||| |||||||  |||  ||| | |||||||||| || ||||||||| |||||    
T  47983223 tcatgaaccaaacgagtcgaaccatacttaacttaagttcaactcatttatttaacgagtttagattttaactcaagttcgactcatttggttcgtgaac 47983322  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    ||| |||||   | ||||| |||| |||||| | ||||||| ||||||||||||||||||||||    
T  47983323 caagttcaacaaatcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattg 47983386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 146 - 327
Target Start/End: Original strand, 15662906 - 15663087
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| |||||||||||||||| || ||||||||  ||||  | |||| |   ||| ||| || |||||||||||||||||||||||||||||| ||||    
T  15662906 atcgagtcatctcatgaaccaaaagagtcgaactacatatagcttaagttcggttcaattagttgacgaacttaattttcagctcaagttcggctcattt 15663005  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcct 327  Q
    ||| |||||||||| ||| | | | ||||| | || | |||||   |||| || | ||||||||||||||||||| ||||||    
T  15663006 ggtacatgaaccaagttcgacgaatcaattattgaattgaattacaaactctaattgagttggttcggttcattgtcagcct 15663087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 146 - 255
Target Start/End: Original strand, 40002851 - 40002960
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| |||||| |||| ||||||| ||||||||  ||||  |||||| ||||||| ||| || |||||||||||||||| ||||||||||||| ||||    
T  40002851 atcgagtcatctcgtgaatcaaacgagtcgaactacatatagctcaagttcaactcaattagttgacgaacttaattttcaactcaagttcggctcattt 40002950  T
Q  246 ggttcatgaa 255  Q
    | ||||||||    
T  40002951 gattcatgaa 40002960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 185 - 320
Target Start/End: Original strand, 7995967 - 7996102
Alignment:
Q  185 taattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcg 284  Q
    ||||||||||  | |||||||| ||||||| ||||||||| | || ||||||| || ||| |||| ||||||||| ||||| | | ||||| |||| |||    
T  7995967 taattcaagttgagctcatttatttaacgagcttaattttaaacttaagttcgactcattaggtttatgaaccaagttcaacgaatcaattatcgaatcg 7996066  T
Q  285 aattttgaactatattcgagttggttcggttcattg 320  Q
    ||| | ||||||| ||| ||||||||||||||||||    
T  7996067 aatctcgaactattttcaagttggttcggttcattg 7996102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 326
Target Start/End: Complemental strand, 7016196 - 7016078
Alignment:
Q  208 ttaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttg 307  Q
    ||||| |||||| |||| ||||||||||| ||| |||||||||||||||||| |||||   | |||||||||| |||| | | ||| | | |||||||||    
T  7016196 ttaacaaacttagttttgagctcaagttcagctcatttggttcatgaaccaagttcaacaaatcaattgtcgaatcgagtctcgaattttgttcgagttg 7016097  T
Q  308 gttcggttcattggcagcc 326  Q
    ||||||||||||| |||||    
T  7016096 gttcggttcattgtcagcc 7016078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 146 - 319
Target Start/End: Complemental strand, 29113707 - 29113535
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    ||||||| | |||||||||||||||| | |||||||  |||  |||||| || ||| |||| ||  | |||||||||||||| |||| ||| || |||||    
T  29113707 atcgagctaactcatgaaccaaacgagttgaactatacatagctcaagttcacctctttta-ttggcaaacttaattttcagttcaaattcagcctattt 29113609  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 319  Q
    |||||||||||||| ||||| | | |||||| | | | || ||||||||| |||| ||||||||| ||||||||    
T  29113608 ggttcatgaaccaagttcaacgaatcaattgccaaattgagttttgaactttatttgagttggtttggttcatt 29113535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 197 - 308
Target Start/End: Complemental strand, 33233682 - 33233574
Alignment:
Q  197 aactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaacta 296  Q
    ||||| |||| ||||||| |||||||||||||||||||||  |||||||| |||||||| ||| |||   | |  |||||||||||| ||||||||||||    
T  33233682 aactcgtttagttaacgaccttaattttcagctcaagttcaacttatttgattcatgaatcaatttc---gaattaattgtcgagtcaaattttgaacta 33233586  T
Q  297 tattcgagttgg 308  Q
    | ||||||||||    
T  33233585 tgttcgagttgg 33233574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 209 - 320
Target Start/End: Complemental strand, 21680776 - 21680665
Alignment:
Q  209 taacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttgg 308  Q
    |||||||||||||||| ||||||||||||||| ||||  ||||| |||||| ||||| |    |||| |||| |||| ||| ||||||| |||||| |||    
T  21680776 taacgaacttaatttttagctcaagttcggctcatttcattcataaaccaagttcaacgagataattatcgaatcgagtttcgaactattttcgagctgg 21680677  T
Q  309 ttcggttcattg 320  Q
    ||||||||||||    
T  21680676 ttcggttcattg 21680665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 188 - 326
Target Start/End: Complemental strand, 27076656 - 27076518
Alignment:
Q  188 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 287  Q
    ||||||| |||||| |||| ||||||||||||| ||| ||||||||||||||| |||| ||||||| ||||| ||||| | |  |||| |||| || | |    
T  27076656 ttcaagttcaactcgtttatttaacgaacttaactttgagctcaagttcggctcatttagttcatggaccaagttcaacgaattaattatcgaatcaagt 27076557  T
Q  288 tttgaactatattcgagttggttcggttcattggcagcc 326  Q
     || |||||| ||| |||||||||  ||||||| |||||    
T  27076556 cttaaactattttcaagttggttcaattcattgtcagcc 27076518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 203 - 320
Target Start/End: Original strand, 14101876 - 14101994
Alignment:
Q  203 tttaattaacgaacttaatttt-cagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattc 301  Q
    |||| |||||||| |||||||| |||||||| ||| ||| ||||||||||||||| || |||||||    ||||||||| |||| ||| |||||||  ||    
T  14101876 tttatttaacgaatttaatttttcagctcaaattcagctcatttggttcatgaactaagttcaatgagataattgtcgaatcgagtttggaactattatc 14101975  T
Q  302 gagttggttcggttcattg 320  Q
     ||||||||||| ||||||    
T  14101976 aagttggttcggatcattg 14101994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 14770656 - 14770579
Alignment:
Q  189 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaat 266  Q
    |||||| || |||| ||| || |||||||||||||| || |||||||||||| ||||||||||| |||||| ||||||    
T  14770656 tcaagttcagctcaattagttcacgaacttaatttttagatcaagttcggctcatttggttcataaaccaagttcaat 14770579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 258
Target Start/End: Original strand, 14796572 - 14796657
Alignment:
Q  173 tcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaacca 258  Q
    ||||||||| |||| |  |||| ||||||||||| ||||||||||||||||  || ||||||||  |||| |||||||||||||||    
T  14796572 tcgaactatatatagtcaaagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaacca 14796657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 258
Target Start/End: Original strand, 14805446 - 14805531
Alignment:
Q  173 tcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaacca 258  Q
    ||||||||| |||| |  |||| ||||||||||| ||||||||||||||||  || ||||||||  |||| |||||||||||||||    
T  14805446 tcgaactatatatagtcaaagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaacca 14805531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 326
Target Start/End: Original strand, 6413272 - 6413376
Alignment:
Q  222 tttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattgg 321  Q
    ||||| ||||||||||  | |||||||||||||||||  ||||| | | ||||| || | |||||| | ||||||| |||||||||||||| |||||||     
T  6413272 tttcaactcaagttcgattcatttggttcatgaaccaggttcaacgaatcaattatcaaatcgaatctcgaactattttcgagttggttcgattcattgc 6413371  T
Q  322 cagcc 326  Q
    |||||    
T  6413372 cagcc 6413376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 265
Target Start/End: Original strand, 11991256 - 11991348
Alignment:
Q  173 tcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaa 265  Q
    ||||||||| |||| || |||| ||  ||||||| ||||||||| |||||||||  | ||||||  |||||||||||||||||||| ||||||    
T  11991256 tcgaactatatatagtttaagttcagttcatttagttaacgaacataattttcaatttaagttcatcttatttggttcatgaaccatattcaa 11991348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 162 - 265
Target Start/End: Complemental strand, 48575247 - 48575144
Alignment:
Q  162 aaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaat 261  Q
    |||||||||  |||||||||   ||| |||||| ||||||||||| || |||||||||||||| |  |||||||||  |  ||||||||||||||||| |    
T  48575247 aaccaaacgggtcgaactatacttaactcaagttcaactcatttatttgacgaacttaattttaaattcaagttcgattcgtttggttcatgaaccaagt 48575148  T
Q  262 tcaa 265  Q
    ||||    
T  48575147 tcaa 48575144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 326
Target Start/End: Original strand, 7841665 - 7841759
Alignment:
Q  231 aagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||| | |||||||||||||||||| ||||| | |  |||| |||| |||| | | ||| ||| |||||||||||||||||||||| |||||    
T  7841665 aagttcggttcatttggttcatgaaccaagttcaacgaattaattatcgaatcgagtctcgaa-tattttcgagttggttcggttcattgacagcc 7841759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 8828398 - 8828303
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 252  Q
    ||||||| ||||||| ||||| ||| | ||  |||||| ||||| ||||| |||||  ||||||||||||||||||||||   | |||||||||||    
T  8828398 tcatgaatcaaacgagtcgaattatgtctagctcaagttcaacttatttagttaacagacttaattttcagctcaagttcaattcatttggttcat 8828303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 30251437 - 30251500
Alignment:
Q  202 atttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaa 265  Q
    ||||| ||||||||||||||||| |||||||||||   | |||| |||||||||||||| ||||    
T  30251437 atttagttaacgaacttaatttttagctcaagttcaattcatttagttcatgaaccaaactcaa 30251500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 328
Target Start/End: Complemental strand, 572550 - 572417
Alignment:
Q  196 caactcatttaattaacgaacttaattttcagctcaagttcggctta-tttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaac 294  Q
    |||||||||||||||||||| || ||||| || | || ||||||| | |||||||  |||||||| |||||   | ||||| ||||||||| | | ||||    
T  572550 caactcatttaattaacgaattttatttttagtttaaattcggctcattttggtttttgaaccaagttcaacaaatcaattatcgagtcgagtctcgaac 572451  T
Q  295 tatattcgagttggttcggttcattggcagccta 328  Q
    | | |||||||| | ||| ||||||| |||||||    
T  572450 tttgttcgagtttgctcgattcattgtcagccta 572417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 7e-41; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 149 - 326
Target Start/End: Original strand, 33831455 - 33831632
Alignment:
Q  149 gagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggt 248  Q
    ||||||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  || |||    
T  33831455 gagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggt 33831554  T
Q  249 tcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||||||||||||| |||  |  | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  33831555 tcatgaaccaaattcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 33831632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 160 - 320
Target Start/End: Complemental strand, 2647143 - 2646983
Alignment:
Q  160 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||||||||||| ||||||||| ||||| |||||| ||||| ||||| ||||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  2647143 tgaaccaaacgagtcgaactatatataactcaagttcaacttatttagttaacgaacttaatttttagctcaagttcggctcgtttggttcatgaaccaa 2647044  T
Q  260 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
     ||||| | || ||||  |||||||| || |||||| |||| ||||||  |||||||||||    
T  2647043 gttcaacgaactaattaccgagtcgagttctgaactttatttgagttgtatcggttcattg 2646983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 146 - 320
Target Start/End: Original strand, 26436311 - 26436484
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || ||||||||||||||||||||||||||||||||| |||| |||  ||     
T  26436311 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcacgttcagctcgtta 26436410  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||||||||||||| ||||| |||  || | |||||||||| | | || |||| |||||||||||||||||||||    
T  26436411 ggttcatgaaccaagttcaacggattaaatatcgagtcgaa-tgtcaattataatcgagttggttcggttcattg 26436484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 153 - 326
Target Start/End: Original strand, 27634635 - 27634808
Alignment:
Q  153 catctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 252  Q
    ||||||||||||| ||||| || |||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  || |||||||    
T  27634635 catctcatgaacctaacgagtcaaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcat 27634734  T
Q  253 gaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||| || ||||| |||  || | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  27634735 gaactaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 27634808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 145 - 326
Target Start/End: Complemental strand, 3409372 - 3409191
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    ||||||| || |||||||| ||| ||| ||||||||| || |  |||| | || |||||||| ||||||||||||||||||||||||||||| | | |||    
T  3409372 tatcgagtcagctcatgaatcaatcgagtcgaactatatacagctcaaattcagctcatttatttaacgaacttaattttcagctcaagttcagttcatt 3409273  T
Q  245 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||||||||||| ||||| |    ||||||||| |||| ||| |||||||  ||||||||||||||||||||| |||||    
T  3409272 tggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattgtcgagttggttcggttcattgccagcc 3409191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 36538613 - 36538793
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||||||||||||| ||||| ||||||||| | ||  ||||||  | |||||||||||||||||||||||||||||||||||| |  ||  ||     
T  36538613 atcgagtcatctcatgaacctaacgagtcgaactatatgtagctcaagtttagctcatttaattaacgaacttaattttcagctcaagtccaactcgtta 36538712  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||| |||  |  | ||||||||||| | |||||||| ||||||||||| ||||||||| |||||    
T  36538713 ggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggtttggttcattgtcagcc 36538793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 41959100 - 41959280
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    ||||||||||||||| |||| ||||| ||||||||| | ||  | | || || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  41959100 atcgagccatctcattaacctaacgagtcgaactatatgtagcttatgttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 41959199  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||| ||| ||||| |||  |  | ||||||||||| | |||||||| |||||||| |||||||||||| |||||    
T  41959200 ggttcatgaatcaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttgattcggttcattgtcagcc 41959280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 146 - 317
Target Start/End: Original strand, 34064662 - 34064833
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    ||||| |||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  34064662 atcgaaccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 34064761  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttca 317  Q
    ||||||||||| || ||||| |||  |  | | ||||||||| | |||||||| | ||||||||||||||||    
T  34064762 ggttcatgaactaagttcaacggattagatattgagtcgaatgtcgaactataattgagttggttcggttca 34064833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 153 - 288
Target Start/End: Complemental strand, 38409747 - 38409612
Alignment:
Q  153 catctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 252  Q
    |||||| ||||||||||||  |||||||| |||| || |||| || |||| ||| || || ||||||||||||||||||||||||||| |||||||||||    
T  38409747 catctcgtgaaccaaacgagccgaactatatatagttaaagttcagctcaattagttcacaaacttaattttcagctcaagttcggctcatttggttcat 38409648  T
Q  253 gaaccaaattcaatggaccaattgtcgagtcgaatt 288  Q
    ||||||||||| | | | |||||||||| |||||||    
T  38409647 gaaccaaattcgacgaatcaattgtcgaatcgaatt 38409612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 157 - 326
Target Start/End: Original strand, 40458889 - 40459058
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| |||||||||   || ||||||| || |||||||| ||||||| ||||||||||| |||||||||| || ||||||||| |||||    
T  40458889 tcatgaaccaaacgagtcgaactatacttagttcaagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 40458988  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||| |||||   ||||||| | || |||| | |  |||||| ||| |||||||||||||||||| |||||    
T  40458989 caagttcaacaaaccaattattgaatcgagtatcaaactattttcaagttggttcggttcattgtcagcc 40459058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 154 - 326
Target Start/End: Original strand, 11027873 - 11028045
Alignment:
Q  154 atctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatg 253  Q
    ||||| |||||||||||| ||||||||  ||||  |||||| || |||| ||| || |||||||||||||| || |||||||||||| ||||||||||||    
T  11027873 atctcgtgaaccaaacgagtcgaactacatatagctcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatg 11027972  T
Q  254 aaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||| ||| | | | ||||| |||| | |||||  ||||| || | ||||||||||||||||||| |||||    
T  11027973 aaccaagttcgacgaatcaattatcgaattgaattacgaactctaattgagttggttcggttcattgccagcc 11028045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 162 - 326
Target Start/End: Original strand, 30713129 - 30713293
Alignment:
Q  162 aaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaat 261  Q
    |||||||||| |||||||   ||||  |||||| ||||||| ||| || |||||||||| |||||||||| |||||||| |||||||||||||||||| |    
T  30713129 aaccaaacgagtcgaactgcatatagctcaagttcaactcaattagttgacgaacttaaatttcagctcatgttcggctcatttggttcatgaaccaagt 30713228  T
Q  262 tcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    || | | | ||||| |||| |||||||  ||||  || ||||||||||||||||||||| |||||    
T  30713229 tcgacgaatcaattatcgaatcgaattacgaacactaatcgagttggttcggttcattgccagcc 30713293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 184 - 326
Target Start/End: Complemental strand, 27464717 - 27464575
Alignment:
Q  184 ataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtc 283  Q
    ||||||||||| |||||| |||| |||  ||||||||||||||  ||||||||| || ||||||||||||||||||||||||   | ||||| |||| ||    
T  27464717 ataattcaagtccaactcctttatttagggaacttaattttcaattcaagttcgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 27464618  T
Q  284 gaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
     | | | ||||||| |||||||||||||||||||||| |||||    
T  27464617 aagtctcgaactattttcgagttggttcggttcattgtcagcc 27464575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 159 - 327
Target Start/End: Complemental strand, 11007142 - 11006976
Alignment:
Q  159 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaacca 258  Q
    ||||||||||||| ||||| |||   || ||||||| ||||||||||| ||||||| ||||||||||| |||||||||| || ||||||||| |||||||    
T  11007142 atgaaccaaacgagtcgaattatacttatttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaacca 11007043  T
Q  259 aattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcct 327  Q
    | ||||| | | ||||| |||  ||||   |  |||||| |||||||||||||||||||||| ||||||    
T  11007042 agttcaacgaatcaattatcggatcga--gtcaaactattttcgagttggttcggttcattgtcagcct 11006976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 326
Target Start/End: Complemental strand, 27902613 - 27902442
Alignment:
Q  154 atctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatg 253  Q
    ||||| |||||||||||| ||||||||  ||||  |||||| ||||||| ||| || ||||  |||||||||||||||||||||| | |||| |||||||    
T  27902613 atctcgtgaaccaaacgagtcgaactacatatagctcaagttcaactcaattagttgacgat-ttaattttcagctcaagttcggttcattttgttcatg 27902515  T
Q  254 aaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||| ||| | | | |||||||||| |||| ||  ||||| || |||||||||||||||||| || |||||    
T  27902514 aaccaagttcgacgaatcaattgtcgaatcgatttacgaactttaatcgagttggttcggttcaatgtcagcc 27902442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 199 - 319
Target Start/End: Complemental strand, 33164110 - 33163990
Alignment:
Q  199 ctcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactata 298  Q
    |||||||||||||||||||||||||||||||||||| | |||  || |||||||||||||| ||||| |||  |  | ||||||||||| | ||||||||    
T  33164110 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactata 33164011  T
Q  299 ttcgagttggttcggttcatt 319  Q
     |||| |||||||||||||||    
T  33164010 atcgaattggttcggttcatt 33163990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 146 - 256
Target Start/End: Complemental strand, 34116356 - 34116246
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| |||| |||||||||||||| ||||||||  ||||  |||||| || |||| ||| ||| ||||||||||||| ||||||||||||||| ||||    
T  34116356 atcgagtcatcacatgaaccaaacgagtcgaactacatatagctcaagttcagctcaattatttagcgaacttaattttaagctcaagttcggctcattt 34116257  T
Q  246 ggttcatgaac 256  Q
    |||||||||||    
T  34116256 ggttcatgaac 34116246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 156 - 325
Target Start/End: Complemental strand, 24844839 - 24844670
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    ||||||||||||  |||||||| ||| || |  | |||| || |||||||| ||| |||| |||||||||||||||||||| ||| ||||||||||||||    
T  24844839 ctcatgaaccaattgaatcgaattatatacaccttaagttcagctcatttatttatcgaatttaattttcagctcaagttcagctcatttggttcatgaa 24844740  T
Q  256 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagc 325  Q
    |||| ||||| |    ||||| ||| |||| ||| |||||||  |||||||||||||| |||||| ||||    
T  24844739 ccaagttcaacgagataattgccgaatcgagtttcgaactattatcgagttggttcggatcattgtcagc 24844670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 259
Target Start/End: Original strand, 14103234 - 14103337
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    |||||||| |||| |||||||| ||| |||| || |||| |  ||||||||||||||||||||||||||||| | ||||||| ||||||||| |||||||    
T  14103234 ctcatgaatcaaatgaatcgaaatatatatagtttaagttctgctcatttaattaacgaacttaattttcagtttaagttcgacttatttggctcatgaa 14103333  T
Q  256 ccaa 259  Q
    ||||    
T  14103334 ccaa 14103337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 39690127 - 39690221
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggct 240  Q
    |||||| ||||||||||||||||||| ||||||||  ||||  |||||| ||||||| ||| || ||||||||||||||||||||||||| ||||    
T  39690127 atcgagtcatctcatgaaccaaacgagtcgaactacatatagctcaagttcaactcaattagttgacgaacttaattttcagctcaagtttggct 39690221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 17616276 - 17616397
Alignment:
Q  198 actcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactat 297  Q
    |||| |||| |||| |||||||||||| ||||||||||||||| |||||||||||| | ||||||||| |    ||||||||| |||| |||  ||||||    
T  17616276 actcgtttagttaatgaacttaatttttagctcaagttcggctcatttggttcatgtatcaaattcaacgagataattgtcgaatcgagtttctaactat 17616375  T
Q  298 attcgagttggttcggttcatt 319  Q
     |||||||||||||| ||||||    
T  17616376 tttcgagttggttcgattcatt 17616397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 145 - 326
Target Start/End: Complemental strand, 44740666 - 44740486
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    ||||||| || |||||||||||  ||| ||||||||| || |  |||||| || |||||||  ||||||||||||||||| ||||||||||| |||  ||    
T  44740666 tatcgagtcaactcatgaaccac-cgagtcgaactatataaagctcaagttcagctcatttgtttaacgaacttaatttttagctcaagttcagctcgtt 44740568  T
Q  245 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||||||||||| ||||| |    ||||||||| |||| |    ||||||  ||||||||||||||||||||| |||||    
T  44740567 tggttcatgaaccaagttcaacgagttaattgtcgaatcgagtcccaaactattgtcgagttggttcggttcattgccagcc 44740486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 1094457 - 1094535
Alignment:
Q  189 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatg 267  Q
    |||||| | ||||||||| | ||||| ||||||||||| |||||||||| || ||||||||||||||||||||||||||    
T  1094457 tcaagttcgactcatttattcaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaattcaatg 1094535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 146 - 320
Target Start/End: Original strand, 41332188 - 41332362
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    ||||||| | ||| |||||||| ||| ||||||||| || || ||| || |  | |||||| ||||| ||||||||||||||||||| |||  || | ||    
T  41332188 atcgagcaagctcgtgaaccaaccgagtcgaactatgtacaactcatgttcggcccatttatttaacaaacttaattttcagctcaaattcaactcaatt 41332287  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||| ||||||||| |||||      ||||||||| |||| ||| |||||||||||||||||||| |||||||||    
T  41332288 ggtttatgaaccaagttcaacaagttaattgtcgaatcgagtttcgaactatattcgagttggtttggttcattg 41332362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 156 - 329
Target Start/End: Original strand, 10412407 - 10412580
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    ||||||||||||| || ||| | ||| ||||  |||||| ||||||||||| ||||||| ||||||||| | |||||||||| || || | ||| | |||    
T  10412407 ctcatgaaccaaatgagtcggattatatatagctcaagtccaactcatttatttaacgagcttaatttttaactcaagttcgactcatctagtttacgaa 10412506  T
Q  256 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcctac 329  Q
    || |||| || | || ||||  ||| |||||| | ||||||| |||||||||||| ||||||||  ||||||||    
T  10412507 ccgaatttaacgaactaattaccgaatcgaatctcgaactattttcgagttggtttggttcattatcagcctac 10412580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 196 - 325
Target Start/End: Complemental strand, 17369122 - 17368994
Alignment:
Q  196 caactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaact 295  Q
    ||||||||||| ||||| || |||||||||| |||||||||| || ||| ||||||| ||| |||||||| |    ||||||||||| || ||  |||||    
T  17369122 caactcatttacttaacaaatttaattttcaactcaagttcgactcatt-ggttcataaactaaattcaacgagttaattgtcgagttgagttccgaact 17369024  T
Q  296 atattcgagttggttcggttcattggcagc 325  Q
    ||||||||||||| ||||||||||| ||||    
T  17369023 atattcgagttggctcggttcattgtcagc 17368994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 18667721 - 18667882
Alignment:
Q  159 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaacca 258  Q
    ||||||||||||| ||||||||| ||||| |||||| ||||| ||||| |||||||| ||||  || ||||||| ||  |||  ||||||||||||||||    
T  18667721 atgaaccaaacgagtcgaactatatataactcaagttcaacttatttatttaacgaaattaagctttagctcaaattatgctcgtttggttcatgaacca 18667820  T
Q  259 aattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    | ||||||  |  ||||  |||||||| ||  ||||| |||| ||||||  |||||||||||    
T  18667821 agttcaataaaataattaccgagtcgagttccgaactttatttgagttgtatcggttcattg 18667882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 320
Target Start/End: Complemental strand, 20203825 - 20203723
Alignment:
Q  218 taattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttca 317  Q
    |||||||||||||| ||| | || |||||||||||||||||| ||||| | | ||||||| || |||||||  ||||| || |||||||||||||||| |    
T  20203825 taattttcagctcaggtttgactcatttggttcatgaaccaagttcaacgaatcaattgttgaatcgaattacgaactttaatcgagttggttcggttaa 20203726  T
Q  318 ttg 320  Q
    |||    
T  20203725 ttg 20203723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 2578087 - 2578155
Alignment:
Q  197 aactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaa 265  Q
    |||||||||| |||||||| |||||||||||||||||||| ||| ||||| |||||||| ||| |||||    
T  2578087 aactcatttatttaacgaatttaattttcagctcaagttcagctcatttgattcatgaatcaagttcaa 2578155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 265
Target Start/End: Original strand, 13829875 - 13829954
Alignment:
Q  186 aattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaa 265  Q
    ||||||||| |||||||||||||||||||  |||||||| | |||||||||  || |||||||| ||||||||| |||||    
T  13829875 aattcaagttcaactcatttaattaacgagtttaatttttaactcaagttcaactcatttggtttatgaaccaagttcaa 13829954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 355 - 453
Target Start/End: Original strand, 7241919 - 7242017
Alignment:
Q  355 ttaacctcttctaatagtttacaataacttacttgccattcccaataagctttttctattagaaacaacaaagcttctgcaagagccaaggaataaaag 453  Q
    |||||||| || ||||||| ||| || |||| || ||| ||||||||||| || ||| |||  |||||||||||||||||||||||||| | |||||||    
T  7241919 ttaacctcatccaatagttcacagtagcttaatttccactcccaataagccttctctgttaagaacaacaaagcttctgcaagagccaatgcataaaag 7242017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 40680177 - 40680263
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctca 231  Q
    ||||||| || || ||||||||| ||| ||||||||| ||||| |||| | || |||||||| ||||||||| ||||||||||||||    
T  40680177 tatcgagtcagcttatgaaccaatcgagtcgaactatatataactcaaattcagctcatttatttaacgaacataattttcagctca 40680263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 9963726 - 9963827
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    |||||||||||| ||| ||  ||||| || || |||||| || ||||||||  |||||||||||||||| | || |||||| ||| ||||||||||||||    
T  9963726 ctcatgaaccaatcgagtcagactatatacaactcaagttcagctcatttatctaacgaacttaatttttaacttaagttcagctcatttggttcatgaa 9963825  T
Q  256 cc 257  Q
    ||    
T  9963826 cc 9963827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 326
Target Start/End: Original strand, 29806950 - 29807043
Alignment:
Q  233 gttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||| ||||||||| | |||||| ||||| | | ||||| |||| |||| | ||||||||| ||||| |||||||||||||||| |||||    
T  29806950 gttcggctcatttggttcgtaaaccaagttcaacgaatcaattatcgaatcgagtcttgaactattttcgaattggttcggttcattgccagcc 29807043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 33831384 - 33831453
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaa 215  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||    
T  33831384 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaa 33831453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 20987565 - 20987629
Alignment:
Q  80 aagtgaaattcctacttcctagatggtggaacggatggataaaaagaaaaggagaaatgtaacga 144  Q
    |||||||||||||||||||||||| |||||| |||||| |||||  ||||||||| | |||||||    
T  20987565 aagtgaaattcctacttcctagatagtggaatggatgggtaaaagtaaaaggagatacgtaacga 20987629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 320
Target Start/End: Original strand, 35796284 - 35796356
Alignment:
Q  248 ttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||||||||||| ||||||| | ||| ||| |||||||||||  |||||||||||||||| |||| |||||||    
T  35796284 ttcatgaaccaagttcaatgaatcaactgttgagtcgaatttcaaactatattcgagttgattcgattcattg 35796356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 320
Target Start/End: Original strand, 9753107 - 9753237
Alignment:
Q  189 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 288  Q
    |||||| ||||||||||| ||  || |||||||||| || ||| ||||  || ||||||||||||||||||| | || | | |||||||||| ||||||     
T  9753107 tcaagttcaactcatttagttgccggacttaatttt-agttcacgttcttctcatttggttcatgaaccaaacttaacgaatcaattgtcgaatcgaatc 9753205  T
Q  289 ttgaactatattcgagttggttcggttcattg 320  Q
    | ||||| | ||||| |||| |||||||||||    
T  9753206 tcgaactttgttcgacttggctcggttcattg 9753237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 20987771 - 20987845
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaa 220  Q
    |||||| ||||||||||| | |||||||||||| || |||| ||||| | || |||||||||| |||||||||||    
T  20987771 atcgagtcatctcatgaatctaacgaatcgaaccatttatagttcaacttcagctcatttaatcaacgaacttaa 20987845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 320
Target Start/End: Complemental strand, 45383269 - 45383147
Alignment:
Q  198 actcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactat 297  Q
    |||||||||||||| ||| |||||||| ||||||| ||  ||  |||||||||||||| ||| ||||  |   ||||||| || ||||| || ||||||     
T  45383269 actcatttaattaatgaaattaattttaagctcaaatttagcgcatttggttcatgaatcaagttcatcgagtcaattgttgaatcgaacttcgaactaa 45383170  T
Q  298 attcgagttggttcggttcattg 320  Q
    |||| |||| |||||||||||||    
T  45383169 attcaagttagttcggttcattg 45383147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 44935737 - 44935805
Alignment:
Q  159 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcag 227  Q
    ||||||||||||| || |||||| ||||||| |||| || |||||||| ||||||||| | ||||||||    
T  44935737 atgaaccaaacgagtcaaactatatataatttaagttcagctcatttagttaacgaacatgattttcag 44935805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 2328463 - 2328385
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagtt 235  Q
    ||||||| || |||| ||||||||| |||||||||||| ||||||||||| || | |   |||||||||| ||||||||    
T  2328463 tcatgaatcacacgagtcgaactatatataattcaagttcaactcatttatttgaagggtttaattttcaactcaagtt 2328385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 10196936 - 10196870
Alignment:
Q  196 caactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaatt 262  Q
    ||||||||||| | ||| | || ||||||||||||||  || ||||||||| |||||||||||||||    
T  10196936 caactcatttattgaacaagctcaattttcagctcaaaatcagcttatttgattcatgaaccaaatt 10196870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 3e-40; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 453440 - 453620
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| ||||||||||||||||||||||||||||||| ||||||| | |||  ||     
T  453440 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcaactcatttaattaacgaacttaattttcaactcaagtccagctcgtta 453539  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||| |||  |  | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  453540 ggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 453620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 146 - 320
Target Start/End: Original strand, 11161529 - 11161703
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  11161529 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 11161628  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||||||||||||| ||||| |||  || | ||||||||||| | |||||||| || |||||||| |||||||||    
T  11161629 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcaagttggtttggttcattg 11161703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 146 - 320
Target Start/End: Original strand, 34516095 - 34516269
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| |||||| |||||||||||| ||||||||  |||| ||||||| || |||| |||||  |||||||||||||||||||||||||||||| ||||    
T  34516095 atcgagtcatctcgtgaaccaaacgagtcgaactacatatagttcaagttcagctcaattaatcgacgaacttaattttcagctcaagttcggctcattt 34516194  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||| ||||| ||| ||||||| | |||||||||| | |||||  ||||| || | |||||||||||||||||||    
T  34516195 ggttgatgaatcaagttcaatgaatcaattgtcgaattgaattacgaactttaattgagttggttcggttcattg 34516269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 160 - 326
Target Start/End: Original strand, 43967481 - 43967647
Alignment:
Q  160 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||||||||||| ||||||||| ||||| |||||| ||||||||||| |||||||||||||| || |||||||||||||||  |||||||||||||||||    
T  43967481 tgaaccaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaa 43967580  T
Q  260 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||| | || ||||   ||||||| ||  ||||| | ||| |||||  ||||||||||| |||||    
T  43967581 attcaacgaactaattactgagtcgagttccgaactttgttcaagttgtatcggttcattgccagcc 43967647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 146 - 319
Target Start/End: Complemental strand, 27189265 - 27189092
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| |||| | ||||||||| |||||||| ||  ||||| |||||| ||||||| ||| || ||||||||||||||||||||||||||| || ||||    
T  27189265 atcgagtcatcccgtgaaccaaatgaatcgaattacatataactcaagttcaactcaattagttgacgaacttaattttcagctcaagttcgactcattt 27189166  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 319  Q
    |||||||||||||| ||| | | | ||||| |||| || ||||  ||||| || |||||||| |||||||||||    
T  27189165 ggttcatgaaccaagttcgacgaatcaattatcgaatctaattacgaactctaatcgagttgattcggttcatt 27189092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 156 - 326
Target Start/End: Original strand, 3307901 - 3308071
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    ||||| |||||| ||| ||||||||| || |  |||||| |  |||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  3307901 ctcataaaccaatcgagtcgaactatatacagctcaagttcggctcatttatttaacgaacttaattttctgctcaagttcggctcatttggttcatgaa 3308000  T
Q  256 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    | || ||| | |    ||||||||| |||| ||  |||||||  ||||||||||||||||||||| |||||    
T  3308001 ctaagttctacgagttaattgtcgaatcgagttccgaactattgtcgagttggttcggttcattgccagcc 3308071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 160 - 326
Target Start/End: Complemental strand, 33280146 - 33279980
Alignment:
Q  160 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||||||||||| || |||||  |||| ||||||| || |||| ||| || |||||||||||||| ||||||  ||||||| ||||||||||||||||||    
T  33280146 tgaaccaaacgagtctaactacatatagttcaagttcagctcaattagttgacgaacttaattttaagctcatattcggctcatttggttcatgaaccaa 33280047  T
Q  260 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
     ||| | | | ||||| |||| || ||||  ||||| || ||||||||||||||||||||| |||||    
T  33280046 gttcgacgaatcaattatcgaatcaaattacgaactttaatcgagttggttcggttcattgtcagcc 33279980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 160 - 326
Target Start/End: Original strand, 34655006 - 34655172
Alignment:
Q  160 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||||||||||| ||||||||| ||||| ||||||  |||||||||| ||||| |||||||| || |||||||||||| ||  |||||||||||||| ||    
T  34655006 tgaaccaaacgagtcgaactatatataactcaagtttaactcatttagttaacaaacttaatctttagctcaagttcgactcgtttggttcatgaactaa 34655105  T
Q  260 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
     |||||   || ||||  |||||||| ||  ||||| |||||||||||  ||||||||||| |||||    
T  34655106 gttcaacaaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgccagcc 34655172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 166 - 285
Target Start/End: Original strand, 23181132 - 23181251
Alignment:
Q  166 aaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaa 265  Q
    |||||| ||||||||  | || ||||||| || |||| ||| || ||||||||||||||||| |||||||||||| |||||||||||||||||||||| |    
T  23181132 aaacgagtcgaactacatctagttcaagttcagctcaattagtttacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaaattcga 23181231  T
Q  266 tggaccaattgtcgagtcga 285  Q
     | | |||||||||| ||||    
T  23181232 cgaatcaattgtcgaatcga 23181251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 156 - 326
Target Start/End: Complemental strand, 9412697 - 9412527
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 255  Q
    ||||||||  |||||| ||||| ||| ||||| |||| | || ||||||||  ||||||| |||||| ||| ||||||||| ||| ||||||||||||||    
T  9412697 ctcatgaattaaacgagtcgaattatatataactcaaattcagctcatttatgtaacgaatttaattctcaactcaagttcagctcatttggttcatgaa 9412598  T
Q  256 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||| ||||| |     |||||||||||||  |   ||||||| ||||||||||||||||||||| |||||    
T  9412597 ccaagttcaacgagttcattgtcgagtcgagctccaaactataatcgagttggttcggttcattgccagcc 9412527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 229 - 326
Target Start/End: Original strand, 39478090 - 39478187
Alignment:
Q  229 tcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||||  || |||||||||||||||||| | ||||| ||||||| |||| |||| | | ||||||| |||||||||||||||||||||| |||||    
T  39478090 tcaagttcaactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgccagcc 39478187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 325
Target Start/End: Original strand, 22563974 - 22564142
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| ||||| ||| | || ||||||| |   ||||| | || |||| ||||||||||| ||||||||||  |||||||||||||||||    
T  22563974 tcatgaaccaaacgagtcgaattatatgtagttcaagttcggttcattcatttgacgagcttaattttcaactcaagttcgatttatttggttcatgaac 22564073  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagc 325  Q
    ||| ||||| | | |||||  ||| || |||||  || ||| |||||||||| ||||||| ||| ||||    
T  22564074 caagttcaacgaaacaattaccgaatcaaatttcaaattattttcgagttggatcggttcgttgccagc 22564142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 226 - 320
Target Start/End: Original strand, 43384831 - 43384925
Alignment:
Q  226 agctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||||||||||  || |||||||||||||||||| ||||| | |  |||| |||| |||||| | ||||||| ||||||||||||||||||||||    
T  43384831 agctcaagttcaactcatttggttcatgaaccaacttcaacgaattaattatcgaatcgaatctcgaactattttcgagttggttcggttcattg 43384925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 200 - 307
Target Start/End: Original strand, 9135963 - 9136070
Alignment:
Q  200 tcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatat 299  Q
    ||||||| ||||| ||||||| ||||||||||||||| ||||||||| ||||| |||||| ||||| |    |||||||||||||| || | |||||| |    
T  9135963 tcatttagttaacaaacttaaatttcagctcaagttcagcttatttgattcataaaccaagttcaacgagttaattgtcgagtcgagttctaaactattt 9136062  T
Q  300 tcgagttg 307  Q
    | ||||||    
T  9136063 ttgagttg 9136070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 213 - 319
Target Start/End: Original strand, 32740663 - 32740769
Alignment:
Q  213 gaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcg 312  Q
    ||||||| ||||||| |||||||| | | ||||||||||||||||||||||||||    ||||||||| | || ||   ||||||  |||||||||||||    
T  32740663 gaacttatttttcagttcaagttcagttcatttggttcatgaaccaaattcaatgagttaattgtcgaattgagttccaaactattgtcgagttggttcg 32740762  T
Q  313 gttcatt 319  Q
    |||||||    
T  32740763 gttcatt 32740769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 237
Target Start/End: Complemental strand, 10749383 - 10749311
Alignment:
Q  165 caaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcg 237  Q
    ||||||| ||||||||  ||||  |||||| || |||| ||| || |||||||||||||||||||||||||||    
T  10749383 caaacgagtcgaactacatatagctcaagttcagctcaattagttgacgaacttaattttcagctcaagttcg 10749311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 35058318 - 35058380
Alignment:
Q  200 tcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaatt 262  Q
    ||||||| ||||| ||||| ||||||||||||||||| ||| ||||| ||  |||||||||||    
T  35058318 tcatttagttaacaaacttgattttcagctcaagttcagctcatttgattgttgaaccaaatt 35058380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 320
Target Start/End: Original strand, 24854613 - 24854730
Alignment:
Q  203 tttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcg 302  Q
    ||||||||||||  ||||||||||||||||||||  || ||||||||||  |||||| || || |    ||||||||||| ||||||  |||| |||||     
T  24854613 tttaattaacgagtttaattttcagctcaagttcaactcatttggttcacaaaccaagtttaacgagttaattgtcgagttgaatttcaaactttattca 24854712  T
Q  303 agttggttcggttcattg 320  Q
    || || ||||||| ||||    
T  24854713 agctgtttcggtttattg 24854730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 1091727 - 1091803
Alignment:
Q  189 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaa 265  Q
    |||||| ||||||||||  || |||||||||||||| | |||| ||||| ||  ||||||||||||| ||| |||||    
T  1091727 tcaagttcaactcatttgtttgacgaacttaattttaaactcaggttcgactcgtttggttcatgaatcaagttcaa 1091803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 19253 - 19433
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||||||||||||| ||||| ||||| ||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  19253 atcgagccatctcatgaacctaacgagtcgaattatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 19352  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||| |||  |  | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  19353 ggttcatgaaccaagttcaaaggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 19433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 3e-37; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 145 - 320
Target Start/End: Complemental strand, 4441485 - 4441310
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    |||||| ||| |||||||||||| ||||||||||||| || | ||||||| || |||||||| ||||||||||||||||||| ||||||||| ||| |||    
T  4441485 tatcgaaccagctcatgaaccaaccgaatcgaactatatacagttcaagttcagctcatttatttaacgaacttaattttcaactcaagttcagctcatt 4441386  T
Q  245 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    | |||| |||||||| ||||| |  | ||||||||| |||| ||| |||||||  |||||||||||||||||||||    
T  4441385 tagttcgtgaaccaagttcaacgagctaattgtcgaatcgagtttcgaactattgtcgagttggttcggttcattg 4441310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 147 - 326
Target Start/End: Complemental strand, 5640434 - 5640255
Alignment:
Q  147 tcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttg 246  Q
    ||||| |||||  |||||||||||| ||||||||| |||| ||||||| || |||| ||| || ||||||||||||||||| |||||||||||| |||||    
T  5640434 tcgagtcatcttgtgaaccaaacgagtcgaactatatatagttcaagttcagctcaattagttgacgaacttaattttcagttcaagttcggctcatttg 5640335  T
Q  247 gttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||||||||||| ||| | | | ||||| |||| |||||||  ||||| || ||||||||||||||||||||| |||||    
T  5640334 gttcatgaaccaagttcgacgaatcaattatcgaatcgaattacgaactctaatcgagttggttcggttcattgccagcc 5640255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 157 - 326
Target Start/End: Complemental strand, 3081890 - 3081721
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| |||||||||   || ||||||| || |||||||||||||||| ||||||||||| |||||||||| || ||||||||| |||||    
T  3081890 tcatgaaccaaacgagtcgaactatacttagttcaagttcagctcatttaattaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 3081791  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||| ||||| | ||||||| |||| |||| | | ||||||| |||||| ||||||||||||||| |||||    
T  3081790 caagttcaacgaaccaattatcgaatcgagtatcgaactattttcgagctggttcggttcattgccagcc 3081721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 146 - 326
Target Start/End: Complemental strand, 10961979 - 10961799
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| |||||| |||||||||||| ||||||||  |||| ||||||| || |||| ||| || |||||||||||||||||||||| |||| || ||||    
T  10961979 atcgagtcatctcgtgaaccaaacgagtcgaactacatatagttcaagttcagctcaattagttgacgaacttaattttcagctcaaattcgactcattt 10961880  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||| | | |||||||||| || ||||   |||| || ||||||||||||||||||||| |||||    
T  10961879 ggttcatgaaccaagttcaacgaatcaattgtcgaatcaaattacaaactttaatcgagttggttcggttcattgccagcc 10961799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 188 - 326
Target Start/End: Original strand, 13312021 - 13312161
Alignment:
Q  188 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcga-- 285  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||||||| || |||||||||||||||||| | ||||| ||||||| |||| ||||      
T  13312021 ttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagt 13312120  T
Q  286 attttgaactatattcgagttggttcggttcattggcagcc 326  Q
    || | ||||||| |||||||||||||||||||||| |||||    
T  13312121 atatcgaactattttcgagttggttcggttcattgccagcc 13312161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 160 - 326
Target Start/End: Original strand, 33110429 - 33110595
Alignment:
Q  160 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||||||||||| ||||||||| ||||| |||||| | ||||||||| |||||||||||||| || |||| ||||||||||  |||||||||||||||||    
T  33110429 tgaaccaaacgagtcgaactatatataactcaagttcgactcatttagttaacgaacttaatctttagcttaagttcggctcgtttggttcatgaaccaa 33110528  T
Q  260 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
     ||||| | || ||||  |||||||| ||  ||||| |||||||||||  ||||||||||| |||||    
T  33110529 gttcaacgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgccagcc 33110595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 146 - 326
Target Start/End: Complemental strand, 9950943 - 9950763
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| |||||| |||||||||||| | ||||||  ||||  |||||| || |||| ||| || |||||||||||||||| ||||||||||||| ||||    
T  9950943 atcgagtcatctcgtgaaccaaacgagttgaactacatatagctcaagttcagctcaattagttgacgaacttaattttcaactcaagttcggctcattt 9950844  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||| ||| | || ||||||| || |||| |||||| || |||||||| |||| ||||||| |||||    
T  9950843 ggttcatgaaccaagttcgatgaatcatttgtcgaatcaaattatgaactttaatcgagttgattcgattcattgccagcc 9950763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 10346678 - 10346858
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||||||||||||  ||||| ||||||||| | ||| |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  10346678 atcgagtcatctcatgaacttaacgagtcgaactatatgtaactcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 10346777  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||||| ||||| |||  |  | | ||||||||| | |||||||| |||| |||||| ||||||||| |||||    
T  10346778 ggttcatgaaccaagttcaacggattagatatagagtcgaatgtcgaactataatcgatttggtttggttcattgccagcc 10346858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 7437272 - 7437434
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| |||||||||   || ||||||| || |||||||| ||||||| ||||||||||| || ||||||| || ||||||||| |||||    
T  7437272 tcatgaaccaaacgagtcgaactatacttagttcaagttcagctcatttatttaacgagcttaattttcaactaaagttcgactcatttggttcgtgaac 7437371  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 319  Q
    ||| ||||| | ||| ||| |||| |||| | | ||||||| |||||||| ||||||||||||    
T  7437372 caagttcaacgaacccattatcgaatcgagtatcgaactattttcgagttagttcggttcatt 7437434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 146 - 326
Target Start/End: Original strand, 8200599 - 8200768
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| |||||||||||||||||||||||||||||||||||            ||     
T  8200599 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcaactcatttaattaacgaacttaattttcagctc-----------gtta 8200687  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||| ||| ||||| |||  || | ||||||||||| | |||||||| ||||||||||| ||||||||| |||||    
T  8200688 ggttcatgaatcaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggtttggttcattgtcagcc 8200768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 145 - 326
Target Start/End: Original strand, 1501804 - 1501985
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    ||||||| || |||||||||||| ||| ||||||||| || |  | ||||    |||||||| ||||||||||||||||||||||||||||||| | |||    
T  1501804 tatcgagtcagctcatgaaccaaccgagtcgaactatatacagcttaagtttggctcatttatttaacgaacttaattttcagctcaagttcggttcatt 1501903  T
Q  245 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    |||||||||||| || ||||| |    ||||||| | |||| ||| |||| ||  ||||||||||||||||||||| |||||    
T  1501904 tggttcatgaacgaagttcaacgagttaattgtcaaatcgagtttcgaacaattgtcgagttggttcggttcattgtcagcc 1501985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 157 - 326
Target Start/End: Original strand, 22295884 - 22296053
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    |||||||||||| || | ||||||| ||||| |||| | |||| |||||| |||||||||||||| || |||||||||||||||  ||||||||||||||    
T  22295884 tcatgaaccaaaagagttgaactatatataactcaaattcaacacatttacttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaac 22295983  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||| || |||  || ||||   ||||||| ||  ||||| ||||| |||||  | |||||||||||||||    
T  22295984 caagtttaataaactaattactgagtcgagttccgaactttattcaagttgtcttggttcattggcagcc 22296053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 6999223 - 6999343
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    |||||||||| |||||||||||| ||| ||||||||| || | ||||||| ||  ||||||  ||||| ||||||||||||||||||||||| ||| |||    
T  6999223 tatcgagccaactcatgaaccaaccgagtcgaactatataaagttcaagttcagttcatttgtttaacaaacttaattttcagctcaagttcagctcatt 6999322  T
Q  245 tggttcatgaaccaaattcaa 265  Q
    | |||||| |||||| |||||    
T  6999323 tagttcattaaccaagttcaa 6999343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 18095487 - 18095595
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    |||||||| ||| |||| |||||||  |||  |||||| || |||||||| ||||||||||||||||| | |||||||||| |||||||||||| |||||    
T  18095487 tcatgaacaaaatgaattgaactatgcatagctcaagttcatctcatttatttaacgaacttaatttttaactcaagttcgacttatttggttcgtgaac 18095586  T
Q  257 caaattcaa 265  Q
    ||| |||||    
T  18095587 caagttcaa 18095595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 157 - 320
Target Start/End: Original strand, 18099784 - 18099947
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||||| |||||||  |||  |||||| || |||||||| ||||||||||||||| | | ||||| |||| || ||||||||| |||||    
T  18099784 tcatgaaccaaacgaattgaactatgcatagctcaagttcatctcatttatttaacgaacttaattgttaactcaaattcgactcatttggttcgtgaac 18099883  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    ||| ||||| | | | ||| |||| |||| | |  |||| | |||||||||||| |||||||||    
T  18099884 caagttcaacgaatccattatcgaatcgagtctcaaacttttttcgagttggtttggttcattg 18099947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 146 - 280
Target Start/End: Complemental strand, 27985073 - 27984939
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| |||||| ||||| |||||| ||||||||  | || ||||||| || |||| ||| || || |||||||||||||| |||||||||||| ||||    
T  27985073 atcgagtcatctcgtgaactaaacgagtcgaactacatctagttcaagttcagctcaattagtttacaaacttaattttcagttcaagttcggctcattt 27984974  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcga 280  Q
    ||||||| |||||| ||| | | | ||||||||||    
T  27984973 ggttcataaaccaagttcgacgaatcaattgtcga 27984939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 155 - 320
Target Start/End: Original strand, 17441123 - 17441289
Alignment:
Q  155 tctcatgaaccaaacgaatcgaactatctataattcaagtacaac-tcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatg 253  Q
    |||| ||||||||| || |||||||||| |||| |||||| |  | ||||||| || |||| ||||||||||| |||||||||  || ||||||||||||    
T  17441123 tctcgtgaaccaaatgagtcgaactatccataactcaagttcggcctcatttatttgacgagcttaattttcaactcaagttcaactcatttggttcatg 17441222  T
Q  254 aaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    ||| || ||||| | |  ||||  | | |||| ||| ||||||| |||| |||||||||||||||||    
T  17441223 aactaagttcaacgaattaattaccaaatcgagtttcgaactattttcgggttggttcggttcattg 17441289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 3901548 - 3901607
Alignment:
Q  156 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaa 215  Q
    ||||||||||||||||| |||||||| ||||| | |||| || |||||||||||||||||    
T  3901548 ctcatgaaccaaacgaaccgaactatatataacttaagttcagctcatttaattaacgaa 3901607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 12428960 - 12429007
Alignment:
Q  273 attgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    ||||||||||||| || ||||||||||| |||||||||||||||||||    
T  12428960 attgtcgagtcgagttctgaactatatttgagttggttcggttcattg 12429007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 32163551 - 32163610
Alignment:
Q  199 ctcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaacca 258  Q
    |||||||| ||||||||||||||||||| ||||||||  ||| ||| |||||||||||||    
T  32163551 ctcatttagttaacgaacttaattttcaactcaagtttagctcattaggttcatgaacca 32163610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 232
Target Start/End: Complemental strand, 13355755 - 13355722
Alignment:
Q  199 ctcatttaattaacgaacttaattttcagctcaa 232  Q
    ||||||||||||||||||||||||||||||||||    
T  13355755 ctcatttaattaacgaacttaattttcagctcaa 13355722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 320
Target Start/End: Complemental strand, 9463507 - 9463363
Alignment:
Q  176 aactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaatt 275  Q
    ||||||||||| || |||| |  ||| ||||| |||||||||||||||| || | || ||| ||| ||||||||||| ||| || || ||||    ||||    
T  9463507 aactatctatagtttaagttcggctcgtttaaataacgaacttaatttttagtttaaattcagctcatttggttcataaactaagtttaatgagttaatt 9463408  T
Q  276 gtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
     ||||||||| ||  ||||| ||||||||| |  |||||||||||    
T  9463407 atcgagtcgagttccgaactttattcgagtagtctcggttcattg 9463363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 231
Target Start/End: Original strand, 12428897 - 12428929
Alignment:
Q  199 ctcatttaattaacgaacttaattttcagctca 231  Q
    |||||||| ||||||||||||||||||||||||    
T  12428897 ctcatttatttaacgaacttaattttcagctca 12428929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 76; Significance: 6e-35; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 146 - 320
Target Start/End: Original strand, 9948 - 10120
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| || || ||||||||||||| ||||| |||  ||| | ||| | || |||||||||||||||||||||||||||| || |||||||||| ||||    
T  9948 atcgagtcaactgatgaaccaaacgagtcgaattat--atagtacaaattcagctcatttaattaacgaacttaattttcatcttaagttcggctcattt 10045  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    ||| |||||| ||||||||| | |  |||||||||||| |||||| |||||||||||||||| ||||||||||||    
T  10046 ggtacatgaatcaaattcaacgaattaattgtcgagtcaaattttaaactatattcgagttgattcggttcattg 10120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 11439 - 11600
Alignment:
Q  159 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaacca 258  Q
    ||||||||||||| ||||| ||| |||| ||||| | || |||||||||||||||||||||||||||| || |||||||||| |||||||  ||||| ||    
T  11439 atgaaccaaacgagtcgaattatatatagttcaaattcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatca 11538  T
Q  259 aattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    | ||||| | |  |||| ||||||| |||||| |||||| ||||||||||||||||||||||    
T  11539 agttcaacgaattaattatcgagtcaaattttaaactatgttcgagttggttcggttcattg 11600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 146 - 320
Target Start/End: Complemental strand, 7491 - 7317
Alignment:
Q  146 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 245  Q
    |||||| ||||||||||||||||||| |||| |||| |||  ||||||| || |||| ||| ||| ||||||||||||||||||||||||||||| ||||    
T  7491 atcgagtcatctcatgaaccaaacgagtcgacctatatatggttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcattt 7392  T
Q  246 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
    |||||||||||||| ||| | | | ||||| |||| |||||||  ||||  || |||| ||||||||||||||||    
T  7391 ggttcatgaaccaagttcgacgaatcaattatcgaatcgaattacgaacactaatcgaattggttcggttcattg 7317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 155 - 326
Target Start/End: Original strand, 14392 - 14563
Alignment:
Q  155 tctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatga 254  Q
    |||| |||||||||||| |||||||||| |||| | |||| |  |||||||| || |||| ||||||||||  |||||||||   | |||||||||||||    
T  14392 tctcgtgaaccaaacgagtcgaactatccataactaaagttcggctcatttatttgacgagcttaattttcgactcaagttcaaatcatttggttcatga 14491  T
Q  255 accaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    ||||| ||||||| | |||||  ||| |||| ||| ||||||| |||| ||||||||||||||||| |||||    
T  14492 accaagttcaatgaatcaattaccgaatcgagtttcgaactattttcgggttggttcggttcattgtcagcc 14563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 352 - 254
Alignment:
Q  161 gaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 259  Q
    |||| |||||| ||||||| ||||||| |||||| ||||||||||||||||||||||||||| | | ||||||||||||| ||| ||||||||||||||    
T  352 gaacaaaacgagtcgaactgtctataactcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaa 254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 145 - 326
Target Start/End: Complemental strand, 26805 - 26624
Alignment:
Q  145 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 244  Q
    |||||||  ||||| |||||||||||| ||||||||  ||||  | |||| || |||| ||| || ||||||||||||||||||||||||||| || |||    
T  26805 tatcgagttatctcgtgaaccaaacgagtcgaactacatatagcttaagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatt 26706  T
Q  245 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 326  Q
    || |||||||||||| |||||   | || ||||||| |||||||  ||||| || | ||||||||||| ||||||| |||||    
T  26705 tgattcatgaaccaagttcaacaaatcagttgtcgaatcgaattacgaactctaattgagttggttcgattcattgtcagcc 26624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 189 - 326
Target Start/End: Original strand, 21088 - 21224
Alignment:
Q  189 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 288  Q
    |||||| ||||||||||| |||| || ||||||||||| |||||||||| ||  ||||||||||||||||| ||||| | | ||||| |||| |||| |     
T  21088 tcaagttcaactcatttatttaatgagcttaattttcaactcaagttcgactc-tttggttcatgaaccaagttcaacgaatcaattatcgaatcgagtc 21186  T
Q  289 ttgaactatattcgagttggttcggttcattggcagcc 326  Q
    | ||||||| |||||||||||||||||||||| |||||    
T  21187 tcgaactattttcgagttggttcggttcattgtcagcc 21224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 188 - 320
Target Start/End: Complemental strand, 32924 - 32794
Alignment:
Q  188 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 287  Q
    ||||||| ||| ||||||| ||||||| |||||||| || |||||||||| || |||||||   |||||||| ||||| | |||||||||||| |||| |    
T  32924 ttcaagttcaattcatttatttaacgagcttaatttacaactcaagttcgactcatttggtg--tgaaccaagttcaacgaaccaattgtcgaatcgagt 32827  T
Q  288 tttgaactatattcgagttggttcggttcattg 320  Q
     | ||||||| ||||||||||||||||||||||    
T  32826 atcgaactattttcgagttggttcggttcattg 32794  T

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Target: scaffold0192 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 25726 - 25657
Alignment:
Q  168 acgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcg 237  Q
    |||||||||||||| |||||||||||| || ||||||||||||||| ||||||||||||| | |||||||    
T  25726 acgaatcgaactatatataattcaagttcatctcatttaattaacggacttaattttcagtttaagttcg 25657  T

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Target: scaffold0444 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 265
Target Start/End: Complemental strand, 952 - 831
Alignment:
Q  144 atatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttat 243  Q
    ||||||||| |  |||||||||| |||| ||||| |||   ||  |||||| ||||||||||| ||||||| ||||||||||| | ||| |||  || ||    
T  952 atatcgagctagttcatgaaccagacgagtcgaattatacttagctcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcat 853  T
Q  244 ttggttcatgaaccaaattcaa 265  Q
    |||||||||||||||| |||||    
T  852 ttggttcatgaaccaagttcaa 831  T

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Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 157 - 320
Target Start/End: Original strand, 96248 - 96411
Alignment:
Q  157 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 256  Q
    ||||||||||||||| ||||| ||   |||| |||||| ||||||||||| ||||||| ||||||||| | || ||||| | || |||||||||| |||     
T  96248 tcatgaaccaaacgagtcgaattacacataactcaagttcaactcatttatttaacgagcttaattttgaacttaagttggactcatttggttcacgaat 96347  T
Q  257 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 320  Q
     || ||||||| |  | ||  |||  ||||| | ||||||| |||||| | |||||||||||||    
T  96348 taagttcaatgaattatttaacgaaccgaatctcgaactattttcgagctagttcggttcattg 96411  T

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Target: scaffold0063 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 265
Target Start/End: Complemental strand, 51476 - 51366
Alignment:
Q  155 tctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatga 254  Q
    ||||| |||||||| || ||||||||   ||||||||||| ||||||||||| ||||| | ||||||||| |  ||| ||||| || |||||||||| ||    
T  51476 tctcaagaaccaaatgagtcgaactacacataattcaagttcaactcatttatttaacaagcttaattttaaaatcacgttcgactcatttggttcacga 51377  T
Q  255 accaaattcaa 265  Q
    || || |||||    
T  51376 actaagttcaa 51366  T

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Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 320
Target Start/End: Original strand, 11400 - 11521
Alignment:
Q  199 ctcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactata 298  Q
    |||||||| ||||||||||||||||| | || ||||||  || ||||||||||||||| || ||| | |    ||||||||| |||| ||   ||||||     
T  11400 ctcatttatttaacgaacttaatttttaacttaagttcacctcatttggttcatgaactaagttcgacgaggtaattgtcgaatcgagttccaaactatt 11499  T
Q  299 ttcgagttggttcggttcattg 320  Q
     |||||||||||||||||||||    
T  11500 atcgagttggttcggttcattg 11521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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