View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4016_low_10 (Length: 368)
Name: NF4016_low_10
Description: NF4016
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4016_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 7 - 359
Target Start/End: Original strand, 36400144 - 36400508
Alignment:
| Q |
7 |
attttgccctttggatttgcacttgaagttttggtcttaatgtgaatagatgttatgtgggatgtgatgtccatacttacacattacaacaaacatgcac |
106 |
Q |
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| T |
36400144 |
attttgccctttggatttgcacttgaagttttggtcttaatgtgaatagatgttatgtgggatgtgatgtccatacttacacattacaacaaacatgcac |
36400243 |
T |
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| Q |
107 |
aaataa------------acatgacaacatttattgagaatgttgtgaaagagcaatagccacacaacaatgataattgattcaaaggagggagaccaag |
194 |
Q |
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| T |
36400244 |
aaataagttggcctcatgacatgacaacatttattgagaatgttgtgaaagagcaatagccacacaacaatgataattgattcaaaggagggagaccaag |
36400343 |
T |
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| Q |
195 |
ttacaaannnnnnngcaaactacagtgcatcttaatagtatttcattacttaagtccccacatgttatttatggtttattaactgcttcaaaaattggat |
294 |
Q |
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| T |
36400344 |
ttacaaatttttgtgcaaactacagtgcatcttaatagtatttcattacttaagtccccacatgttatttatggtttattaactacttaaaaaattggat |
36400443 |
T |
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| Q |
295 |
ttattgcgctctccccacacatagacacatagttaaaatgtgaatgtacaatcttaattctctgc |
359 |
Q |
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| T |
36400444 |
ttattgcgctctccccacacatagacacatagttaaaatgtgaatgtacaatcttaattctctgc |
36400508 |
T |
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