View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4017-Insertion-13 (Length: 433)

Name: NF4017-Insertion-13
Description: NF4017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4017-Insertion-13
NF4017-Insertion-13
[»] chr5 (17 HSPs)
chr5 (11-433)||(24190144-24190566)
chr5 (9-433)||(22404215-22404638)
chr5 (7-416)||(22245811-22246216)
chr5 (7-433)||(22251493-22251919)
chr5 (43-433)||(25104948-25105319)
chr5 (43-433)||(25164041-25164412)
chr5 (9-420)||(23420011-23420425)
chr5 (9-395)||(9421970-9422353)
chr5 (40-411)||(23757742-23758112)
chr5 (40-411)||(23823198-23823568)
chr5 (72-305)||(26037190-26037420)
chr5 (72-354)||(38405723-38406003)
chr5 (40-355)||(26328700-26329012)
chr5 (72-300)||(22082208-22082433)
chr5 (9-355)||(30605145-30605490)
chr5 (225-355)||(18221471-18221600)
chr5 (118-172)||(23624417-23624471)
[»] chr3 (19 HSPs)
chr3 (10-433)||(24195805-24196229)
chr3 (7-433)||(17135597-17136020)
chr3 (7-433)||(23954010-23954434)
chr3 (9-433)||(18482827-18483249)
chr3 (7-427)||(1918696-1919113)
chr3 (9-410)||(7028525-7028914)
chr3 (9-420)||(13790974-13791382)
chr3 (9-420)||(18547944-18548353)
chr3 (59-395)||(44452804-44453137)
chr3 (7-411)||(19634184-19634585)
chr3 (244-433)||(15635559-15635749)
chr3 (9-414)||(18063661-18064068)
chr3 (250-433)||(17702688-17702872)
chr3 (9-248)||(15572457-15572687)
chr3 (214-414)||(18034554-18034757)
chr3 (224-427)||(13515263-13515467)
chr3 (9-188)||(13515073-13515251)
chr3 (72-172)||(295983-296083)
chr3 (74-172)||(28051680-28051778)
[»] chr1 (13 HSPs)
chr1 (7-433)||(26971848-26972277)
chr1 (7-433)||(13165677-13166101)
chr1 (9-427)||(4246324-4246743)
chr1 (9-351)||(20840718-20841059)
chr1 (252-433)||(14745481-14745660)
chr1 (9-290)||(20200542-20200820)
chr1 (54-305)||(24986393-24986643)
chr1 (9-196)||(11667357-11667543)
chr1 (128-355)||(17850949-17851173)
chr1 (307-410)||(11667611-11667716)
chr1 (245-355)||(12753422-12753532)
chr1 (230-355)||(23477609-23477732)
chr1 (230-262)||(25349876-25349908)
[»] chr4 (15 HSPs)
chr4 (7-433)||(23399648-23400072)
chr4 (7-433)||(28019586-28020010)
chr4 (7-431)||(33898461-33898881)
chr4 (7-433)||(18601112-18601534)
chr4 (7-433)||(16384172-16384597)
chr4 (7-373)||(25117199-25117563)
chr4 (222-433)||(10191169-10191379)
chr4 (93-355)||(10724621-10724883)
chr4 (93-355)||(10938390-10938652)
chr4 (40-410)||(15161969-15162341)
chr4 (9-355)||(15699790-15700133)
chr4 (348-433)||(25117108-25117193)
chr4 (237-355)||(19659800-19659917)
chr4 (245-355)||(33746279-33746389)
chr4 (230-355)||(19183357-19183481)
[»] scaffold0103 (1 HSPs)
scaffold0103 (7-433)||(25130-25551)
[»] chr2 (6 HSPs)
chr2 (10-433)||(24789614-24790036)
chr2 (7-433)||(12910772-12911199)
chr2 (7-433)||(22611174-22611598)
chr2 (7-433)||(23758907-23759331)
chr2 (230-355)||(19444962-19445086)
chr2 (230-305)||(21530793-21530867)
[»] chr8 (13 HSPs)
chr8 (7-428)||(22485421-22485840)
chr8 (9-420)||(23540861-23541273)
chr8 (39-409)||(45136418-45136786)
chr8 (40-409)||(27924938-27925307)
chr8 (100-260)||(22476635-22476794)
chr8 (319-428)||(22476518-22476626)
chr8 (9-410)||(33977362-33977764)
chr8 (214-414)||(13660030-13660232)
chr8 (214-414)||(13718673-13718875)
chr8 (124-410)||(33962043-33962331)
chr8 (9-196)||(26536807-26536992)
chr8 (230-320)||(24092353-24092443)
chr8 (230-300)||(25240776-25240846)
[»] scaffold0024 (1 HSPs)
scaffold0024 (7-433)||(159355-159778)
[»] chr6 (40 HSPs)
chr6 (7-433)||(17527336-17527762)
chr6 (7-433)||(23879169-23879592)
chr6 (7-433)||(9281162-9281585)
chr6 (7-428)||(17234881-17235301)
chr6 (9-420)||(33666088-33666496)
chr6 (9-427)||(19100187-19100602)
chr6 (15-428)||(13195611-13196023)
chr6 (7-433)||(17855477-17855902)
chr6 (70-433)||(25969624-25969984)
chr6 (70-433)||(25974064-25974424)
chr6 (9-419)||(13869856-13870260)
chr6 (9-420)||(19171711-19172120)
chr6 (10-360)||(19077499-19077847)
chr6 (7-345)||(19894120-19894457)
chr6 (9-411)||(21722861-21723262)
chr6 (97-411)||(8465213-8465529)
chr6 (40-414)||(12039193-12039569)
chr6 (40-412)||(20465379-20465753)
chr6 (258-433)||(25964977-25965151)
chr6 (214-420)||(14259208-14259418)
chr6 (40-239)||(12028628-12028825)
chr6 (9-174)||(21705984-21706149)
chr6 (9-225)||(20989244-20989458)
chr6 (9-195)||(20653589-20653774)
chr6 (72-195)||(25805928-25806050)
chr6 (54-196)||(17876253-17876394)
chr6 (54-167)||(17863973-17864086)
chr6 (73-355)||(23882216-23882495)
chr6 (218-410)||(17864087-17864281)
chr6 (277-404)||(20989484-20989612)
chr6 (7-74)||(25970317-25970384)
chr6 (7-74)||(25974757-25974824)
chr6 (118-355)||(29253245-29253479)
chr6 (288-414)||(25805753-25805882)
chr6 (118-190)||(28623142-28623213)
chr6 (73-172)||(15930366-15930465)
chr6 (375-433)||(19894441-19894499)
chr6 (230-264)||(17869589-17869623)
chr6 (230-264)||(17879341-17879375)
chr6 (230-291)||(15930521-15930582)
[»] chr7 (21 HSPs)
chr7 (7-433)||(645416-645840)
chr7 (7-433)||(11520864-11521288)
chr7 (74-431)||(11588748-11589105)
chr7 (7-433)||(14165447-14165872)
chr7 (70-411)||(11999186-11999525)
chr7 (39-414)||(16207365-16207739)
chr7 (9-414)||(20991841-20992248)
chr7 (40-360)||(4459095-4459413)
chr7 (9-410)||(29545595-29545993)
chr7 (9-395)||(12326133-12326517)
chr7 (9-174)||(15438617-15438781)
chr7 (214-410)||(15506571-15506767)
chr7 (9-116)||(15506828-15506935)
chr7 (214-357)||(15438455-15438599)
chr7 (230-355)||(10280172-10280296)
chr7 (118-355)||(14927009-14927244)
chr7 (118-355)||(15350475-15350710)
chr7 (73-172)||(16437317-16437416)
chr7 (230-281)||(21260866-21260917)
chr7 (213-263)||(6045771-6045821)
chr7 (230-355)||(16437136-16437261)
[»] scaffold0037 (1 HSPs)
scaffold0037 (7-433)||(109711-110136)
[»] scaffold0185 (1 HSPs)
scaffold0185 (7-433)||(1820-2244)
[»] scaffold0088 (1 HSPs)
scaffold0088 (9-433)||(36874-37295)
[»] scaffold0059 (2 HSPs)
scaffold0059 (7-264)||(47844-48101)
scaffold0059 (336-433)||(48125-48222)
[»] scaffold0020 (1 HSPs)
scaffold0020 (230-430)||(12185-12384)
[»] scaffold0226 (3 HSPs)
scaffold0226 (40-410)||(17610-17982)
scaffold0226 (40-410)||(27004-27376)
scaffold0226 (54-410)||(7037-7395)
[»] scaffold0004 (1 HSPs)
scaffold0004 (98-433)||(356838-357178)
[»] scaffold0359 (2 HSPs)
scaffold0359 (7-193)||(2411-2597)
scaffold0359 (242-395)||(2241-2392)
[»] scaffold0069 (2 HSPs)
scaffold0069 (102-411)||(6210-6519)
scaffold0069 (42-92)||(9296-9346)
[»] scaffold0190 (1 HSPs)
scaffold0190 (40-411)||(16106-16476)
[»] scaffold0213 (1 HSPs)
scaffold0213 (40-357)||(8064-8382)
[»] scaffold0259 (1 HSPs)
scaffold0259 (40-208)||(16811-16977)
[»] scaffold0129 (1 HSPs)
scaffold0129 (7-110)||(16109-16212)
[»] scaffold0453 (1 HSPs)
scaffold0453 (7-110)||(1453-1556)
[»] scaffold0003 (2 HSPs)
scaffold0003 (73-172)||(26947-27046)
scaffold0003 (230-355)||(26766-26891)
[»] scaffold0480 (1 HSPs)
scaffold0480 (118-163)||(11732-11777)


Alignment Details
Target: chr5 (Bit Score: 331; Significance: 0; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 11 - 433
Target Start/End: Complemental strand, 24190566 - 24190144
Alignment:
Q  11 tattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacgat 110  Q
    ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  24190566 tattgatcaagtaacgcgcatatcatctaagaatcagctgtagaatatttctaaagtgtattttatattttaggaaatatttaatattttttggaacgat 24190467  T
Q  111 cctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaacg 210  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  24190466 cctataaatgttccgacattttaggactttccagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagcccaaca 24190367  T
Q  211 tattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttga 310  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||| || |    
T  24190366 tattatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgttcattcaagccgtcatactaaaaagtttagatttttagggtttta 24190267  T
Q  311 gtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtgtgt 410  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||  |||||| |||||||||| |||||||| |||||    
T  24190266 gtcttcatgtattctgcttttgtatcgtttgtgatgcaagtttagaatctattgtgtgttctttctcatatcgtttgtgatacttgttaggactctgtgt 24190167  T
Q  411 gagtattgattactctttgtact 433  Q
    |||||||||||||||||||||||    
T  24190166 gagtattgattactctttgtact 24190144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 9 - 433
Target Start/End: Original strand, 22404215 - 22404638
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    ||||||||||||| || ||||||||  ||||||||||| ||||  ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  22404215 cttattgatcaagcaaagcgcatatcttctaagaatcaactgtgaaatatttctaaagtgtattttatattttaggaaatatttattattgtttggaacg 22404314  T
Q  109 atcctataaa-tgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcca 207  Q
    |||||||||| |||| |||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  22404315 atcctataaaatgtttcgacattttaggactttatagatttgtttatgattcttgttttgcagattaagctgaaccgatctgcatt-ttactgaagccca 22404413  T
Q  208 acgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggt 307  Q
    ||| ||||||||||||||||| ||||||||||  |||||||||||||||||||||||   ||||| | |||||| ||||||  ||||||||||||||| |    
T  22404414 acgaattatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgattattcaagccgtcattctaaaat-tttagatttttagggtt 22404512  T
Q  308 tgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtg 407  Q
    ||||||||||| |||| |||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||| |||||||||| |||||||||||    
T  22404513 tgagtcttcatttattatgctcttgtatcatttgtgatgcaagtttagaatctactatgtgttctttcttgtatcgtttgtgatacttgttaggactgtg 22404612  T
Q  408 tgtgagtattgattactctttgtact 433  Q
    ||||| |||||| |||||||||||||    
T  22404613 tgtgattattgactactctttgtact 22404638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 7 - 416
Target Start/End: Original strand, 22245811 - 22246216
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| ||||||||||| |||||||||||| || |  ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22245811 aacttattgatcaagcaacgcgcatatcatctaagaatcaactatggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaa 22245910  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||| |||||||||||||||| || |||||| ||    
T  22245911 cgatcctatacatgttccgacattttaggactttccagatttgtttttgattctcgttttgcagattaagttgaaccgatctgcatt-ttgctgaagccc 22246009  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    ||||  |||||||||||||||| ||  ||||||  |||||||||||||||||||||||| |||||| |||||||| ||||||   ||||||||||||||     
T  22246010 aacgagttatttagcccaagctgctatagtatataaggaagacttcaagacctaattgttcattcaagtcgtcattctaaaa--gttagatttttagggt 22246107  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgt 406  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||| || ||||||||||    
T  22246108 ttgagtcttcatggattttgctcttgtatcgtttgtgatgcaagtttagaatctactgtgtgttc-ttcttgtatcgtctatgatatttgttaggactgt 22246206  T
Q  407 gtgtgagtat 416  Q
    ||||||||||    
T  22246207 gtgtgagtat 22246216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 7 - 433
Target Start/End: Original strand, 22251493 - 22251919
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    |||||||| |||||| ||||||||||| ||| |||||| ||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  22251493 aacttattaatcaagcaacgcgcatatcatccaagaattagctgtggaatatttctaaagtgtattttatattttaggaaatatttaatattgttttgaa 22251592  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    ||||| |||||||||| ||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||| ||||||||| || |||||| ||    
T  22251593 cgatcgtataaatgttgcgacattttaggactttccagatttgtttattattcttgttttgcagattaagctgaacctatctgcatt-ttgctgaagccc 22251691  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    |||| ||||||||||||||||| ||||||||||  |||||||||||||||||||||||| |||||| | |||||| ||||||   ||||||||||||||     
T  22251692 aacgaattatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgttcattcaagccgtcattctaaaa--gttagatttttagggt 22251789  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgc---aagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggac 403  Q
    |||||||||||||||||||||||||||||| ||||||||||   || |||||||| || ||||||||| ||||||||||||||||||||||| |||||||    
T  22251790 ttgagtcttcatgtattctgctcttgtatcttttgtgatgcaaaaaatttagaatgtattgtgtgttc-ttcttgtatcgtctgtgatacttgttaggac 22251888  T
Q  404 tgtgtgtgagtattgattact-ctttgtact 433  Q
    ||||||||||||||||||||| |||||||||    
T  22251889 tgtgtgtgagtattgattactcctttgtact 22251919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 43 - 433
Target Start/End: Original strand, 25104948 - 25105319
Alignment:
Q  43 atcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttc 142  Q
    ||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25104948 atcagctctagaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactttcc 25105047  T
Q  143 agatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaacgtattatttagcccaagctacttcagtataaga 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||                ||||| ||||||||||  |    
T  25105048 agatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttattgaagccca----------------aagctgcttcagtatataa 25105131  T
Q  243 ggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttgagtcttcatgtattctgctcttgtatcgtttgt 342  Q
    ||||||||||||||||||||| | |||||| | | |||| ||||||   |||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  25105132 ggaagacttcaagacctaatttttcattcaagccatcattctaaaa--gttagatttttagggtttgagtcttcatgtattctactcttgtatcgtttgt 25105229  T
Q  343 gatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtgtgtgagtattgattactctttgtact 433  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  25105230 gatgcaagtttagaatctactgtgtgttc-ttcttgtatcgtctttgatacttgttaggactgtgtgtgagtattgattactctttgtact 25105319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 43 - 433
Target Start/End: Original strand, 25164041 - 25164412
Alignment:
Q  43 atcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttc 142  Q
    ||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25164041 atcagctctagaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactttcc 25164140  T
Q  143 agatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaacgtattatttagcccaagctacttcagtataaga 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||                ||||| ||||||||||  |    
T  25164141 agatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttattgaagccca----------------aagctgcttcagtatataa 25164224  T
Q  243 ggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttgagtcttcatgtattctgctcttgtatcgtttgt 342  Q
    ||||||||||||||||||||| | |||||| | | |||| ||||||   |||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  25164225 ggaagacttcaagacctaatttttcattcaagccatcattctaaaa--gttagatttttagggtttgagtcttcatgtattctactcttgtatcgtttgt 25164322  T
Q  343 gatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtgtgtgagtattgattactctttgtact 433  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  25164323 gatgcaagtttagaatctactgtgtgttc-ttcttgtatcgtctttgatacttgttaggactgtgtgtgagtattgattactctttgtact 25164412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 9 - 420
Target Start/End: Original strand, 23420011 - 23420425
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    ||||||||||||| || ||||||||  |||||||||||| |||  ||||||||||||||   |||||||||||| |||||||||| ||||| ||||||||    
T  23420011 cttattgatcaagcaatgcgcatatcttctaagaatcagttgtggaatatttctaaagtagtttttatattttaggaaatatttattattggttggaacg 23420110  T
Q  109 atcctataaatgttccgacattttaggacttttcag-atttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcca 207  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||| |||    
T  23420111 atcctataaatgttccgacattttaggacttt-cagtatttgtttctgattcttgttttgcagatta-gctgaaccgatctgctttgtt-ctgaagccca 23420207  T
Q  208 acgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggt 307  Q
    ||  |||||||||||||||||||||||||||   |  ||||||||||||||||||||  |||||| | |||||||||||||||||||||||||||||| |    
T  23420208 actaattatttagcccaagctacttcagtatgtaaaaaagacttcaagacctaattgctcattcaagccgtcatactaaaaagtttagatttttagggtt 23420307  T
Q  308 tgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatct---agtgtgtgttctttcttgtatcgtctgtgatactttttaggact 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||   | |||||||||||| ||||||||| |||||||||| |||||| |    
T  23420308 tgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctcttactgtgtgttctttattgtatcgtttgtgatacttgttaggagt 23420407  T
Q  405 gtg--tgtgagtattgat 420  Q
    |||  |||||||||||||    
T  23420408 gtgtgtgtgagtattgat 23420425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 9 - 395
Target Start/End: Original strand, 9421970 - 9422353
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    ||||||||||||| ||  |||||||  ||||||||||||||||  |||||||||||| |  ||||||||||||| |||||||||| ||||| ||||||||    
T  9421970 cttattgatcaagcaatacgcatatcttctaagaatcagctgtgaaatatttctaaattagattttatattttaggaaatatttattattggttggaacg 9422069  T
Q  109 atcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaa 208  Q
    |||||||||||||||| |||||||||||||||  || |||||||||||||||||||||||||||| |||||||||||||||| ||| | |||||||||||    
T  9422070 atcctataaatgttccaacattttaggactttctagttttgtttctgattcttgttttgcagatt-agctgaaccgatctgctttg-tgctgaagtccaa 9422167  T
Q  209 cgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggtt 308  Q
    |  | |||||||||||| || ||||||||||  ||||||||||||| ||||||||||  ||||| | |||||| ||||||||||||||||||||||| ||    
T  9422168 ctaagtatttagcccaaactgcttcagtatataaggaagacttcaatacctaattgt-tattcaagccgtcattctaaaaagtttagatttttagggatt 9422266  T
Q  309 gagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactt 395  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||| | |||||||| ||||||||||| ||||||||||    
T  9422267 gagtcttcatgtattatgctcttgtatcgtctgtgatgcaagtttagaatctactatgtgttctctcttgtatcgtatgtgatactt 9422353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 40 - 411
Target Start/End: Original strand, 23757742 - 23758112
Alignment:
Q  40 agaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactt 139  Q
    ||||| ||||||  ||||||||||||||  ||||||||||||| |||||||||  ||||| ||||||||||||||||||||||  |||||||||||||||    
T  23757742 agaattagctgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctataaatgttttgacattttaggactt 23757841  T
Q  140 ttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaacgtattatttagcccaagctacttcagtata 239  Q
    | |||||||||||| | ||||||||| ||||||| |||||||||||||||| ||| |  ||||| |||||  | |||||| |||||||| ||||||||||    
T  23757842 tccagatttgtttcgggttcttgtttggcagatt-agctgaaccgatctgctttg-tgttgaagcccaactaagtatttatcccaagctgcttcagtata 23757939  T
Q  240 agaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagtcttcatgtattctgctcttgtatcgt 338  Q
      | ||||||| |||||||||||||  |||||| |  |||||||||||||||||||||||||||||  ||||||||| ||||  |||  |||||||||||    
T  23757940 taaagaagactacaagacctaattgatcattcaagctgtcatactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttgtatcgt 23758039  T
Q  339 ttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactt-tttaggactgtgtgtg 411  Q
    ||||||||||||| ||||| ||  |||| | |||||||||||||||||||||||||| ||||||||||| ||||    
T  23758040 ttgtgatgcaagtctagaaccttttgtgag-tctttcttgtatcgtctgtgatacttgtttaggactgtttgtg 23758112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 40 - 411
Target Start/End: Original strand, 23823198 - 23823568
Alignment:
Q  40 agaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactt 139  Q
    ||||| ||||||  ||||||||||||||  ||||||||||||| |||||||||  ||||| ||||||||||||||||||||||  |||||||||||||||    
T  23823198 agaattagctgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctataaatgttttgacattttaggactt 23823297  T
Q  140 ttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaacgtattatttagcccaagctacttcagtata 239  Q
    | |||||||||||| | ||||||||| ||||||| |||||||||||||||| ||| |  ||||| |||||  | |||||| |||||||| ||||||||||    
T  23823298 tccagatttgtttcgggttcttgtttggcagatt-agctgaaccgatctgctttg-tgttgaagcccaactaagtatttatcccaagctgcttcagtata 23823395  T
Q  240 agaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagtcttcatgtattctgctcttgtatcgt 338  Q
      | ||||||| |||||||||||||  |||||| |  |||||||||||||||||||||||||||||  ||||||||| ||||  |||  |||||||||||    
T  23823396 taaagaagactacaagacctaattgatcattcaagctgtcatactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttgtatcgt 23823495  T
Q  339 ttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactt-tttaggactgtgtgtg 411  Q
    ||||||||||||| ||||| ||  |||| | |||||||||||||||||||||||||| ||||||||||| ||||    
T  23823496 ttgtgatgcaagtctagaaccttttgtgag-tctttcttgtatcgtctgtgatacttgtttaggactgtttgtg 23823568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 72 - 305
Target Start/End: Complemental strand, 26037420 - 26037190
Alignment:
Q  72 tttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcaga 171  Q
    ||||||||||| |||||||||  |||||||| | ||||||||| | ||||||||||||||||||||||| || ||||| ||||||||| |||||||||||    
T  26037420 tttatattttaggaaatatttgttattgttttggacgatcctaaagatgttccgacattttaggactttccatatttg-ttctgattc-tgttttgcaga 26037323  T
Q  172 ttaagctgaaccgatctgcattgttactgaagtccaac-gtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccatt 270  Q
    || |||||||| ||||| | ||||| |||||| | |||   | |||||  ||| |||| ||||||||||  ||| |||||||||||||||||   | |||    
T  26037322 tt-agctgaactgatcttctttgtt-ctgaagccaaactaaagtatttgacccgagctgcttcagtatataagggagacttcaagacctaatgaactatt 26037225  T
Q  271 catgtcgtcatactaaaaagtttagatttttaggg 305  Q
    || | |||||| |||||||||||||||||||||||    
T  26037224 caagccgtcattctaaaaagtttagatttttaggg 26037190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 72 - 354
Target Start/End: Complemental strand, 38406003 - 38405723
Alignment:
Q  72 tttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcaga 171  Q
    ||||||||||| |||||||||  |||||||| | ||||||||| ||||| ||||||||||||||||||| || |||||| ||||||||||||||||||||    
T  38406003 tttatattttaggaaatattttttattgttttggacgatcctaaaaatgatccgacattttaggactttccatatttgtctctgattcttgttttgcaga 38405904  T
Q  172 ttaagctgaaccgatctgcattgttactgaagtccaac-gtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccatt 270  Q
     | | ||| | |||||||  ||||| |||||| | |||   | |||||  |||||| | ||||||||||  |||||||||||||||| ||||||   |||    
T  38405903 -tcatctgga-cgatctgttttgtt-ctgaagccaaactagaatatttgacccaagatgcttcagtatataaggaagacttcaagacttaattgagtatt 38405807  T
Q  271 catgtcgtcatactaaaaagtttagatttttag-gggttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagttta 354  Q
    || | | |||| ||||||||||||||||||||| |  |||||||| |||||  ||| |||||||||| | | |||||||||||||    
T  38405806 caagccttcattctaaaaagtttagatttttagtgttttgagtctacatgtgctctactcttgtatcatgt-tgatgcaagttta 38405723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 40 - 355
Target Start/End: Original strand, 26328700 - 26329012
Alignment:
Q  40 agaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactt 139  Q
    |||||||| ||| ||||||| |||||||     ||||||||||  ||||||||||| |||||| | ||| ||||| | |||||| |||||||||||||||    
T  26328700 agaatcagttgtgtaatattcctaaagttgtgattatattttagaaaatatttaatgttgttttggacgctcctaaagatgttctgacattttaggactt 26328799  T
Q  140 ttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaac-gtattatttagcccaagctacttcagtat 238  Q
    | || |||||| |||||||||||||||||||| | ||||| | |||||||  ||||| |||||| |||||  || |||||  |||  ||| |||| ||||    
T  26328800 tccatatttgtctctgattcttgttttgcaga-tcagctgga-cgatctgttttgtt-ctgaagcccaacaataatatttgacccttgctgcttcggtat 26328896  T
Q  239 aagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttgagtcttcatgtattctgctcttgtatcgt 338  Q
    || |||||||| ||||||||||||   ||||||| | |||||| ||||| ||||||| ||||  ||  |||||| | ||||| ||||  ||||||||| |    
T  26328897 aaaaggaagacatcaagacctaatgaaccattcaagccgtcattctaaagagtttagcttttagggttttgagtatacatgtgttctattcttgtatcat 26328996  T
Q  339 ttgtgatgcaagtttag 355  Q
     | ||||||||||||||    
T  26328997 gt-tgatgcaagtttag 26329012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 72 - 300
Target Start/End: Original strand, 22082208 - 22082433
Alignment:
Q  72 tttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcaga 171  Q
    ||||||||||| |||||||||  |||||||| | ||||||||| | |||||| ||||||||| |||||| || |||||| |||||||||||||||||| |    
T  22082208 tttatattttaggaaatatttgttattgttttggacgatcctaaagatgttctgacattttaagactttccatatttgtctctgattcttgttttgcata 22082307  T
Q  172 ttaagctgaaccgatctgcattgttactgaagtccaacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattc 271  Q
     | ||||| | |||||||  ||||| ||| ||||||||  | |||||  ||| |||| ||| ||||||  ||| ||||||||| |||||||||  |||||    
T  22082308 -tcagctgga-cgatctgttttgtt-ctggagtccaacaaagtatttgacccgagctgctttagtatataagggagacttcaaaacctaattgagcattc 22082404  T
Q  272 atgtcgtcatactaaaaagtttagatttt 300  Q
    | |  ||||| ||||||||||||| ||||    
T  22082405 aagctgtcattctaaaaagtttagctttt 22082433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 355
Target Start/End: Original strand, 30605145 - 30605490
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttgga-ac 107  Q
    ||||||||||||| |||||||||||  |   |||||||| |||  |||||| |||||||    ||||||||||| ||||||||| |  |||||| |  ||    
T  30605145 cttattgatcaagcaacgcgcatatctttacagaatcagttgtggaatattcctaaagttgtgtttatattttaggaaatatttgaagttgttttgtgac 30605244  T
Q  108 gatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcca 207  Q
    ||||||| | ||||||||||||| ||||||||| || |||||||||| |||||||||||||||| | || || | |||||||  ||||| |||||| |||    
T  30605245 gatcctaaagatgttccgacattataggactttccatatttgtttctaattcttgttttgcaga-tcagttgga-cgatctgttttgtt-ctgaagccca 30605341  T
Q  208 ac--gtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg 305  Q
    ||  || ||||||  |   || | ||||||||||  ||| |||||||||||||||||   | ||||| | ||| || |||||||||||||||||||||||    
T  30605342 acaagt-ttatttgacttgagttgcttcagtatataagggagacttcaagacctaatgaactattcaagccgtaattctaaaaagtttagatttttaggg 30605440  T
Q  306 -gttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttag 355  Q
      |||||| | ||||| |||| |||||||||| | | ||||||||||||||    
T  30605441 ttttgagtatacatgtgttctactcttgtatcatgt-tgatgcaagtttag 30605490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 355
Target Start/End: Complemental strand, 18221600 - 18221471
Alignment:
Q  225 agctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttgagtcttcatgtattc 324  Q
    |||| ||||| ||||| ||||||||  |||||||||||||  |||||| |  | ||| ||||||||||||| ||||  ||  |||||||||||||| |||    
T  18221600 agctgcttcattataaaaggaagacaacaagacctaattgatcattcaagcggacattctaaaaagtttagcttttagggttttgagtcttcatgtgttc 18221501  T
Q  325 tgctcttgtatcgtttgtgatgcaagtttag 355  Q
    |  ||||||||| | | ||||||||||||||    
T  18221500 tattcttgtatcatgt-tgatgcaagtttag 18221471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 23624471 - 23624417
Alignment:
Q  118 atgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagat 172  Q
    ||||||| |||||||||||||||||   ||||| |||||||| ||||||||||||    
T  23624471 atgttcctacattttaggacttttcttttttgtctctgattcctgttttgcagat 23624417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 321; Significance: 0; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 10 - 433
Target Start/End: Complemental strand, 24196229 - 24195805
Alignment:
Q  10 ttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacga 109  Q
    |||||||||||| ||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24196229 ttattgatcaagcaacgcgcatatcatctaagaatcagctgtggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacga 24196130  T
Q  110 tcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaac 209  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  |||||    
T  24196129 tcctataaatattccgacattttaggacttttcaaatttgtttctgattcttgttttgcagattaagctgaactgatctacattgttactgaaacccaac 24196030  T
Q  210 gtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttg 309  Q
     |||||||||||||||||| ||||||||||  |||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||| |||    
T  24196029 atattatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgttcattcaagccgtcatactaaaaagtttagatttttagggtttg 24195930  T
Q  310 agtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcg-tctgtgatactttttaggactgtgt 408  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||| ||||||||||||    
T  24195929 agtcttcatgtattcgtctcttgtatcgtttgtgatgcaagtttagaatctactgtgtgttctttcttgtatcgttttgtgatacttgttaggactgtgt 24195830  T
Q  409 gtgagtattgattactctttgtact 433  Q
    |||||||||||||||||||||||||    
T  24195829 gtgagtattgattactctttgtact 24195805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 7 - 433
Target Start/End: Original strand, 17135597 - 17136020
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17135597 aacttattgatcaagcaacgcgcatatcttctaagaatcagctgtggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaa 17135696  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| |||||||||| |||| ||||||||||||||||||| ||    
T  17135697 cgatcctataaatgttccgacattttagaactttccagatttgtttttgattcttgttttgaagattaagctaaaccaatctgcattgttactgaagccc 17135796  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    |||| ||||||||||||||||| ||||||||| | |  ||||||||||||||||||||| |||||| | | |||| ||||||   ||||||||||||||     
T  17135797 aacgaattatttagcccaagctgcttcagtat-ataataagacttcaagacctaattgttcattcaagccatcattctaaaa--gttagatttttagggt 17135893  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgt 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  17135894 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctactgtgtgttctttcttgtatcgtttgtgatacttgttaggactgt 17135993  T
Q  407 gtgtgagtattgattactctttgtact 433  Q
    |||||||||||||||||||||||||||    
T  17135994 gtgtgagtattgattactctttgtact 17136020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 7 - 433
Target Start/End: Original strand, 23954010 - 23954434
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||  ||||||||| | |||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23954010 aacttattgatcaaacaacgcgcatgtcatctaagaatcagctgtggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaa 23954109  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  23954110 cgatactataaatgttccgacattttaggactttccagatttgtttttgattcttgttttgcagattaagctgaaccgatctccattgttactgaagccc 23954209  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    ||| ||||||||||||||| || ||||||||||  | |||||||||||||||||||||| |||||| | |||||| || ||||||||||||||| | ||     
T  23954210 aacatattatttagcccaaactgcttcagtatataaagaagacttcaagacctaattgttcattcaagccgtcattct-aaaagtttagattttcaaggt 23954308  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgt 406  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| |||||||||| ||||||||||    
T  23954309 ttgagtcttcatgtattctgcttttgtatcgtttgtgatgcaagtttaaaatctattgtgtgttc-ttcttgtatcgtatgtgatacttgttaggactgt 23954407  T
Q  407 gtgtgagtattgattactctttgtact 433  Q
    |||||||||||||||||||||||||||    
T  23954408 gtgtgagtattgattactctttgtact 23954434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 9 - 433
Target Start/End: Original strand, 18482827 - 18483249
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    ||||||||||||| |||||||||||  |||||||||||  |||  ||||||||||||||||||||||||||||| |||||||||| | ||||||||||||    
T  18482827 cttattgatcaagcaacgcgcatatcttctaagaatcaattgtggaatatttctaaagtgtattttatattttaggaaatatttattcttgtttggaacg 18482926  T
Q  109 atcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaa 208  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  | |||||| | ||    
T  18482927 atcctataaatgttctgacattttaggacttttcagatttgtttccgattcttgttttgcagattaagctgaaccgatctgcatt-atgctgaagccaaa 18483025  T
Q  209 cgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggtt 308  Q
    || ||||||||||||||||| ||||||||||  |||||||||||||||||||||||| |||||| |||||||| || |||||||||||||||||||| ||    
T  18483026 cgaattatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgttcattcaagtcgtcattct-aaaagtttagatttttagggttt 18483124  T
Q  309 gagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtgt 408  Q
    ||||||| ||||||| |||||||||||| ||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  18483125 gagtctttatgtattatgctcttgtatcatttgtgatgcaagtttagaatttattgtgtgttctttcttgtattgtctgtgatacttgttaggactgtgt 18483224  T
Q  409 gtgagtattgattactctttgtact 433  Q
    |||||||||||||||||||||||||    
T  18483225 gtgagtattgattactctttgtact 18483249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 7 - 427
Target Start/End: Original strand, 1918696 - 1919113
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| ||||||||||| ||||||||||  | |||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  1918696 aacttattgatcaagcaacgcgcatatcatctaagaattcgttgtagaatatttttaaagtgtattttatattttaggaaatatttaatattgtttggaa 1918795  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
     | ||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||  || |||||||||||||||| ||    
T  1918796 gggtcctataaatgctccgacattttaggactttccagatttgtttttgattcttgttttgcagattaagttgaactaatatgcattgttactgaagccc 1918895  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    ||| |||||||||||||||||| ||||||||||  |||||||||| ||||||||||||| |||||| | |||||| ||||||   ||||||||||||||     
T  1918896 aacatattatttagcccaagctgcttcagtatataaggaagactttaagacctaattgttcattcaagccgtcattctaaaa--gttagatttttagggt 1918993  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactg- 405  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||| |||||| ||     
T  1918994 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaag-ttataatctagtgtgtgttc-ttcttgtatcgtctgtgatacttgttaggattgt 1919091  T
Q  406 tgtgtgagtattgattactctt 427  Q
    ||||||||||||||||||||||    
T  1919092 tgtgtgagtattgattactctt 1919113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 9 - 410
Target Start/End: Original strand, 7028525 - 7028914
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    ||||||||||||| ||||||||||| |||| ||||||||| ||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  7028525 cttattgatcaagcaacgcgcatatcatctgagaatcagccgtagaatatttctaaagtgtattttatattttaggaaatattttatattgtttggaacg 7028624  T
Q  109 atcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaa 208  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  7028625 atcctataaatgttccgacattttaggactttccagatttgtttctgattcttgttttgcagattaagttgaaccgatctgcattattactgaagcccaa 7028724  T
Q  209 cgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggtt 308  Q
    |||||||||||||||||||| |||||||| |  ||||||||||||||||||||||||  ||| | | ||||||| |||||||||||||||||||||| ||    
T  7028725 cgtattatttagcccaagctgcttcagtacataaggaagacttcaagacctaattgtttatttaagccgtcatattaaaaagtttagatttttagggttt 7028824  T
Q  309 gagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtgt 408  Q
    |           ||| |||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||| | |||| |||||    
T  7028825 g-----------attttgctcttgtatcgtttgtgatgcaagtttagaatttactgtgtgttc-ttcttgtatcgtctgtgatacttgtaaggagtgtgt 7028912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 9 - 420
Target Start/End: Complemental strand, 13791382 - 13790974
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    ||||||||||||  ||||| |||||  |||||||||||| |||  ||||||||||||||  || |||||||||| |||||||||| |||||||||||||     
T  13791382 cttattgatcaaacaacgcacatatcttctaagaatcagttgtggaatatttctaaagtaaatattatattttaggaaatatttattattgtttggaaca 13791283  T
Q  109 atcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaa 208  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||| ||||    
T  13791282 atcctataaatgttctgacattttaggactttccagatttgtttctaattcttgttttgcagattaagctgaaccgatctgcatt-ttgctgaagcccaa 13791184  T
Q  209 cgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggtt 308  Q
    ||  |||||||||||||||| ||||||||||  |||||||||||||||||||||||   ||||| | |||||| ||||||   |||||||||||||| ||    
T  13791183 cgatttatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgattattcaagccgtcattctaaaa--gttagatttttagggttt 13791086  T
Q  309 gagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtgt 408  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||| |||| ||||||||||||    
T  13791085 gagtcttcatgtattctgctcttgtatcgtttgtgatgcatgtttagaatctactctgtgttctttcttgtatcgtctgtgacacttgttaggactgtgt 13790986  T
Q  409 gtgagtattgat 420  Q
    |||| |||||||    
T  13790985 gtgaatattgat 13790974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 9 - 420
Target Start/End: Complemental strand, 18548353 - 18547944
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    ||||||||||||| ||||  |||||  | ||||||||| ||||  ||||||||||||||  || |||||||||| |||||||||| ||||||||||||||    
T  18548353 cttattgatcaagcaacggacatatcttttaagaatcaactgtggaatatttctaaagtagatattatattttaggaaatatttattattgtttggaacg 18548254  T
Q  109 atcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaa 208  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||  |||||| |||     
T  18548253 atcctgtaaatgttccgacattttaggactttccagatttgtttctgattcttgttttgcagatta-gctgaaccgatttgctttgtg-ctgaagcccat 18548156  T
Q  209 cgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggtt 308  Q
    |  | ||||||||||||||| ||||||||||  | ||||||||||| |||||||||| |||||| | |||||| |||||||||||||||||||| || ||    
T  18548155 ctaaatatttagcccaagctgcttcagtatataaagaagacttcaaaacctaattgttcattcaagccgtcattctaaaaagtttagatttttaaggttt 18548056  T
Q  309 gagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtgt 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||| |||||||| | |||||| |||||    
T  18548055 gagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctactatgtattctttcttgtatcgtttgtgatacgtgttaggattgtgt 18547956  T
Q  409 gtgagtattgat 420  Q
    ||||||||||||    
T  18547955 gtgagtattgat 18547944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 59 - 395
Target Start/End: Complemental strand, 44453137 - 44452804
Alignment:
Q  59 ttctaaagtgtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgatt 158  Q
    |||||||||  ||||||||||||| |||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44453137 ttctaaagtagattttatattttaggaaatatttattattggttggaacaatcctataaatgttccgacattttaggacttttcagttttgtttctgatt 44453038  T
Q  159 cttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaacgtattatttagcccaagctacttcagtataagaggaagacttcaagacc 258  Q
    |||||||||||||||| ||||||||||||| | ||||  |||||| |||||  | ||||||||||||||| ||||||||||  || ||||||||||||||    
T  44453037 cttgttttgcagatta-gctgaaccgatctactttgtg-ctgaagcccaactaagtatttagcccaagctgcttcagtatataagaaagacttcaagacc 44452940  T
Q  259 taattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaat 358  Q
    |||||||  ||||| | |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44452939 taattgtt-attcaagccgtcattctaaaaagtttagatttttagggtttgagtcttcatgtattctgctcttgtatcgtttgtgaagcaagtttagaat 44452841  T
Q  359 ctagtgtgtgttctttcttgtatcgtctgtgatactt 395  Q
    ||| |||||||||| ||||||||||||||||||||||    
T  44452840 ctactgtgtgttctctcttgtatcgtctgtgatactt 44452804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 7 - 411
Target Start/End: Complemental strand, 19634585 - 19634184
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    |||||| |||||||| |||||| || ||  |||||||||||||||  ||||||||||||||  || |||||||||| |||||||||| ||||||||||||    
T  19634585 aacttactgatcaagcaacgcgtatctt--ctaagaatcagctgtggaatatttctaaagtagatattatattttaggaaatatttattattgtttggaa 19634488  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
     ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||  ||||||  |||| || ||| | |||||| ||    
T  19634487 tgattctataaatgttccgacattttaggactttccagatttgtttctgattcttgttttgcaggtt-tgctgaattgatcagctttg-tgctgaagccc 19634390  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg- 305  Q
    |||  | ||||||||||||| | ||||||||||  ||||||||||||||||||||||||  ||||| | ||||||||||||||||||||||||||||||     
T  19634389 aactaagtatttagcccaagttgcttcagtatataaggaagacttcaagacctaattgttaattcaagccgtcatactaaaaagtttagatttttagggt 19634290  T
Q  306 gttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatact-ttttaggact 404  Q
     ||||||||| ||||  |||  ||||||||||||| |||||||||| ||||| ||  |||| |  |||||||||||||||||||||| | ||||||||||    
T  19634289 tttgagtctttatgtgctctattcttgtatcgtttatgatgcaagtctagaaccttttgtgag-cctttcttgtatcgtctgtgatattcttttaggact 19634191  T
Q  405 gtgtgtg 411  Q
    || ||||    
T  19634190 gtttgtg 19634184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 244 - 433
Target Start/End: Original strand, 15635559 - 15635749
Alignment:
Q  244 gaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttgagtcttcatgtattctgctcttgtatcgtttgtg 343  Q
    ||||||||||||| |||||||| |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15635559 gaagacttcaagaactaattgttcattcaagccgtcatactaaaaagtttagatttttagggtttgagtcttcatgtattctgctcttgtatcgtttgtg 15635658  T
Q  344 atgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtgtgtgagtattgattact-ctttgtact 433  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  15635659 atgcaagtttagaatctactgtgtgttcttgcttgtatcgcctgtgatacttgttaggactgtgtgtgagtattgattactcctttgtact 15635749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 9 - 414
Target Start/End: Original strand, 18063661 - 18064068
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatcta-agaatcagctgtataatatttctaaagt-gtattttatattttacgaaatatttaatattgtttggaa 106  Q
    |||||||| |||| ||| |||||||| |||| |||||||||||   |||||||||||||| |||||| |||||||| ||||||||||||||||||| | |    
T  18063661 cttattgaccaagcaacacgcatatt-tctacagaatcagctgaggaatatttctaaagtagtattt-atattttaggaaatatttaatattgttttgga 18063758  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    || | ||| | ||||| ||||||||||||||||| || |||||| ||| ||||||||||||||||||| ||| ||||||||||| ||||  |||||| ||    
T  18063759 cgtttctaaagatgtttcgacattttaggactttccatatttgtctctaattcttgttttgcagatta-gctaaaccgatctgctttgtg-ctgaagccc 18063856  T
Q  207 aacgt-attatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagattttta-gg 304  Q
    |||   | ||||| |||| |||| ||||||||||  ||||||||||||| |||||||||| |||||| | ||||||||||||||||||||||||||| ||    
T  18063857 aactagaatatttggcccgagctgcttcagtatataaggaagacttcaatacctaattgttcattcaagccgtcatactaaaaagtttagatttttacgg 18063956  T
Q  305 ggttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagt-gtgtgttctttcttgtatcgtctgtgatactt-tttagga 402  Q
      ||||||||| ||||  ||| ||| ||||||||||||||||||||||||||| ||  |  ||||||| |||||||||||| |||| ||||| |||||||    
T  18063957 ttttgagtctttatgtgctctactcatgtatcgtttgtgatgcaagtttagaacctcttattgtgttccttcttgtatcgtttgtgctacttgtttagga 18064056  T
Q  403 ctgtgtgtgagt 414  Q
     |||||||||||    
T  18064057 ttgtgtgtgagt 18064068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 250 - 433
Target Start/End: Complemental strand, 17702872 - 17702688
Alignment:
Q  250 ttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaa 349  Q
    |||||| ||||||||| |||||| | | |||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  17702872 ttcaagccctaattgttcattcaagccatcatactaaaaagtttagatttttagggtttgagtcttcatgtattctcgtcttgtatcgtttgtgatgcaa 17702773  T
Q  350 gtttagaatctagtgtgtgttctttcttgtatcg-tctgtgatactttttaggactgtgtgtgagtattgattactctttgtact 433  Q
    |||||||||||| |||||||||||| |||||||| | |||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  17702772 gtttagaatctactgtgtgttcttttttgtatcgttttgtgatacttgttaggattgtgtgtgactattgattactctttgtact 17702688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 15572457 - 15572687
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    ||||||||||||  |||||| ||||  ||||||||||| ||||  |||||||| |||||||||||||||||||| |||||||||| ||||||||||||||    
T  15572457 cttattgatcaaccaacgcgtatatcttctaagaatcatctgtggaatatttcaaaagtgtattttatattttaggaaatatttattattgtttggaacg 15572556  T
Q  109 atcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaa 208  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||| |       |||||||||| |||| ||||||||||||||| |  ||||| ||||    
T  15572557 atcctataaatgttccgacattttaagacttttctgatttgtttctaa-------tttgcagatt-agcttaaccgatctgcattg-tgttgaagcccaa 15572647  T
Q  209 cgtattatttagcccaagctacttcagtataagaggaaga 248  Q
    || ||||||||||  ||||| ||||| ||||  |||||||    
T  15572648 cgaattatttagcttaagctgcttcaatatataaggaaga 15572687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 214 - 414
Target Start/End: Original strand, 18034554 - 18034757
Alignment:
Q  214 tatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagt 312  Q
    |||||||||| |||| ||||||||||  || ||||||||||||||||||| | |||||| | ||||||||||||||||||||||||||||||  ||||||    
T  18034554 tatttagcccgagcttcttcagtatataagtaagacttcaagacctaatttttcattcaagccgtcatactaaaaagtttagatttttagggttttgagt 18034653  T
Q  313 cttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagt-gtgtgttctttcttgtatcgtctgtgatactt-tttaggactgtgtgt 410  Q
    ||| ||||  ||| ||||||||| ||||||||||||||||||||| ||  |  | ||||| |||||||||||| |||||||||| ||||||| |||||||    
T  18034654 ctttatgtgctctactcttgtattgtttgtgatgcaagtttagaacctcttactatgttccttcttgtatcgtttgtgatacttgtttaggagtgtgtgt 18034753  T
Q  411 gagt 414  Q
    ||||    
T  18034754 gagt 18034757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 427
Target Start/End: Original strand, 13515263 - 13515467
Alignment:
Q  224 aagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagtcttcatgtat 322  Q
    ||||| ||||||| ||  |||||||||||||||| |||||   |||||| | ||||||||||||||||||||||||||||||  ||||||||| ||||      
T  13515263 aagctgcttcagtttataaggaagacttcaagacttaatttatcattcaagccgtcatactaaaaagtttagatttttagggttttgagtctttatgtgc 13515362  T
Q  323 tctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactt-tttaggactgtgtgtgagtattgatt 421  Q
    |||  |||||||||||||||||||||||| ||||| ||  |||| |  ||||||||||| || |||||||||| |||||||||||||||||||||||| |    
T  13515363 tctattcttgtatcgtttgtgatgcaagtctagaaccttttgtgag-cctttcttgtattgtttgtgatacttgtttaggactgtgtgtgagtattgaat 13515461  T
Q  422 actctt 427  Q
    ||||||    
T  13515462 actctt 13515467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 13515073 - 13515251
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatcta-agaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaac 107  Q
    ||||||||||||| |||||||||||  | || |||||||| |||  |||||||| |||||  ||||||||||||| |||||||||  ||||| |||||||    
T  13515073 cttattgatcaagcaacgcgcatatc-tatacagaatcagttgtggaatatttcaaaagtagattttatattttaggaaatatttgttattggttggaac 13515171  T
Q  108 gatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatct 188  Q
    ||||||||||||||| |||||||||||| |||| || |||||||| |||||||||||||||||||| |||||| |||||||    
T  13515172 gatcctataaatgttacgacattttaggcctttccatatttgtttatgattcttgttttgcagatt-agctgagccgatct 13515251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 72 - 172
Target Start/End: Complemental strand, 296083 - 295983
Alignment:
Q  72 tttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcaga 171  Q
    ||||||||||| |||||||||  |||||||| | ||||||||| | ||||||||||||||||||||||| || |||||| ||||||||||||||||||||    
T  296083 tttatattttaggaaatatttgttattgttttggacgatcctaaagatgttccgacattttaggactttccatatttgtctctgattcttgttttgcaga 295984  T
Q  172 t 172  Q
    |    
T  295983 t 295983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 74 - 172
Target Start/End: Complemental strand, 28051778 - 28051680
Alignment:
Q  74 tatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagat 172  Q
    ||||||||| ||||||||| |  |||||| | ||| ||||| | ||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  28051778 tatattttaggaaatatttgaagttgttttggacgctcctaaagatgttccgacattttaggactttccatatttgtttctgattcttgttttgcagat 28051680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 304; Significance: 1e-171; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 7 - 433
Target Start/End: Original strand, 26971848 - 26972277
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||  |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  26971848 aacttattgatcaagcaacgcgcatatcttctaagaatcagctgttgaatatttctaaagtgtattttatattttagaaaatatttaatattgtttggaa 26971947  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    | |||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  26971948 ccatcctataaatgttccgacattttagaactttccatatttgtttatgattcttgttttgcagattaagctgaaccgatctgcattgttactaaagccc 26972047  T
Q  207 aacgtattatttagcccaagctacttcagtataaga---ggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttag 303  Q
    |||  ||||||||||||||||| ||||||||||  |   |||||||||||||||||||||||  ||||| | |||||||||||| |||||||||||||||    
T  26972048 aacaaattatttagcccaagctgcttcagtatataataaggaagacttcaagacctaattgttgattcaagccgtcatactaaatagtttagatttttag 26972147  T
Q  304 gggttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggac 403  Q
    || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  26972148 ggtttgagtcttcatgtattctgctcttgtatcgtttgtgattcaagtttagaatctattgtgtgttctttcttgtatcgtctgtgatacttgttaggac 26972247  T
Q  404 tgtgtgtgagtattgattactctttgtact 433  Q
    ||||||||||||||||||||||||||||||    
T  26972248 tgtgtgtgagtattgattactctttgtact 26972277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 7 - 433
Target Start/End: Complemental strand, 13166101 - 13165677
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| ||||| ||||| ||||||||||||| |||  ||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  13166101 aacttattgatcaagcaacgcacatatcatctaagaatcagttgtggaatatttctaaagtgtattttatattttaggaaatatttattattgtttggaa 13166002  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    ||||||||||||| |||||||  ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  13166001 cgatcctataaatcttccgactctttaggactttccagatttgtttctaattcttgttttgcagattaagctgaaccgatctgcatt-ttactgaagccc 13165903  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    || | ||||||||||||||| | ||||||||||  |||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||     
T  13165902 aatgaattatttagcccaagttgcttcagtatataaggaagacttcaagacataattgttcattcaagtcgtcatactaaaaagtttagatttttagggt 13165803  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgt 406  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| | ||||||||||    
T  13165802 ttgagtcttcatgtattctgctcttgtatcggttgtgatgcaagtttagaatctactgtgtgttc-ttcttgtatcgtctgtgatacgtgttaggactgt 13165704  T
Q  407 gtgtgagtattgattactctttgtact 433  Q
    |||||||||||||||||||||||||||    
T  13165703 gtgtgagtattgattactctttgtact 13165677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 9 - 427
Target Start/End: Complemental strand, 4246743 - 4246324
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagc--tgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||| ||| |||||||  |||||||||||||  |||  ||||||||||||||  ||||||||||||| |||||||||| ||||| ||||||    
T  4246743 cttattgatcaagcaacacgcatatcttctaagaatcagcgttgtggaatatttctaaagtagattttatattttaggaaatatttattattggttggaa 4246644  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    ||||| ||| ||||||||||||||||||||||||  | |||||||||||||||||||||||||||||| ||||||||||||||| ||||  |||||| ||    
T  4246643 cgatcttatgaatgttccgacattttaggactttcaatatttgtttctgattcttgttttgcagatta-gctgaaccgatctgctttgtg-ctgaagccc 4246546  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    |||  ||||||||||||||||| ||||||||||  | |||||||||||||||||||||| |||||| | || |||||||||||||||||||||||||||     
T  4246545 aactaattatttagcccaagctgcttcagtatataaagaagacttcaagacctaattgttcattcaagccgccatactaaaaagtttagatttttagggt 4246446  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactt-tttaggactg 405  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| || ||||||||||    
T  4246445 ttgagtcttcatgtattttgctcttgtatcgtttgtgatgcaagtttagaatctattgtgtgttctttcttgtatcgtatgtgatatttgtttaggactg 4246346  T
Q  406 tgtgtgagtattgattactctt 427  Q
    |||||||||||||| |||||||    
T  4246345 tgtgtgagtattgaatactctt 4246324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 9 - 351
Target Start/End: Original strand, 20840718 - 20841059
Alignment:
Q  9 cttattgatcaagaaacgcgcatat-tatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaac 107  Q
    ||||||||||||| ||||||||||| |||  || |||||| |||  ||||||||||||||  ||||||||||||| |||||||||  ||||| |||||||    
T  20840718 cttattgatcaagcaacgcgcatatctataaaa-aatcagttgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaac 20840816  T
Q  108 gatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcca 207  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| |||||||| ||||||| ||| |||||||| |||    
T  20840817 gatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgtagatt-agctgaactgatctgctttg-tactgaagccca 20840914  T
Q  208 acgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttag-ggg 306  Q
    ||  | ||||||||||||||| ||||| ||||  || || |||||||||||||||||  |||| | | |||||||||||||||||||||||||||| |      
T  20840915 actaagtatttagcccaagcttcttcaatatataagaaatacttcaagacctaattgatcatttaagccgtcatactaaaaagtttagatttttagtgtt 20841014  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagt 351  Q
    ||||||||| ||||  | |  ||||||||||||||||||||||||    
T  20841015 ttgagtctttatgtgctatattcttgtatcgtttgtgatgcaagt 20841059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 252 - 433
Target Start/End: Original strand, 14745481 - 14745660
Alignment:
Q  252 caagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagt 351  Q
    |||||||||||||| |||||| | |||||| ||||||   ||||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||||||    
T  14745481 caagacctaattgttcattcaagccgtcattctaaaag--ttagaattttagggtttgagtcttcatgtattcttctcttgtatcatttgtgatgcaagt 14745578  T
Q  352 ttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtgtgtgagtattgattactctttgtact 433  Q
    |||||||||| |||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  14745579 ttagaatctattgtgtgttatttcttgtatcgtctgtgatacttgttaggactgtgcgtgagtattgattactctttgtact 14745660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 9 - 290
Target Start/End: Original strand, 20200542 - 20200820
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaag-aatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaac 107  Q
    ||||||||||||| |||||||||||  |||||| |||||| |||  ||||||||||||||  |||| |||||||| |||||||||  ||||| |||||||    
T  20200542 cttattgatcaagcaacgcgcatatc-tctaaggaatcagttgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaac 20200639  T
Q  108 gatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcca 207  Q
    ||||||||||||||||| | |||||||||||||  | |||||| | |||||||||||||||||||| |||||||||||||||| ||| | |||||| | |    
T  20200640 gatcctataaatgttccaatattttaggactttctaaatttgtatatgattcttgttttgcagatt-agctgaaccgatctgctttg-tgctgaagccta 20200737  T
Q  208 acgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaag 290  Q
    ||  | ||||||||| ||||| ||||||||||  | |||||||||||||| ||||||  |||||| | |||||||||||||||    
T  20200738 actaagtatttagcctaagctgcttcagtatataacgaagacttcaagacataattgatcattcaagccgtcatactaaaaag 20200820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 54 - 305
Target Start/End: Complemental strand, 24986643 - 24986393
Alignment:
Q  54 aatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttc 153  Q
    ||||||||||||||    ||||||||||| |||||||||  | |||||| |||||||| || | ||||||||||||||||||||||| || |||||||||    
T  24986643 aatatttctaaagtaatatttatattttaggaaatatttgtttttgttttgaacgatcataaagatgttccgacattttaggactttccatatttgtttc 24986544  T
Q  154 tgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaac-gtattatttagcccaagctacttcagtataagaggaagacttc 252  Q
    |||||  ||||||| ||||| |||||||||||| ||| || || ||||||  ||||   | ||||||||||||||| ||||||||||  ||| |||||||    
T  24986543 tgatttctgttttgtagatt-agctgaaccgatttgc-ttttttctgaagcgcaactaaagtatttagcccaagctgcttcagtatataagggagacttc 24986446  T
Q  253 aagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg 305  Q
    |||||||||| |  |||||| | |||||| |||||||||||||||||||||||    
T  24986445 aagacctaatagatcattcaagccgtcattctaaaaagtttagatttttaggg 24986393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 11667357 - 11667543
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagt-gtattttatattttacgaaatatttaatattgtttggaac 107  Q
    |||||||| |||| |||||||||||  |   ||||| || |||  |||||||||||||| |||||| |||||||| |||||||||  |||||||| | ||    
T  11667357 cttattgaccaagcaacgcgcatatctttacagaataagttgtggaatatttctaaagtagtattt-atattttaggaaatatttgttattgttttggac 11667455  T
Q  108 gatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgtt 196  Q
    ||||||| | ||||| | ||||||||||| ||| || |||||||||| ||||||||||||||| || |||||||| ||||||| |||||    
T  11667456 gatcctaaagatgttacaacattttaggattttccatatttgtttctaattcttgttttgcaggtt-agctgaactgatctgctttgtt 11667543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 355
Target Start/End: Original strand, 17850949 - 17851173
Alignment:
Q  128 attttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaac--gtattatttagcccaa 225  Q
    ||||||||||||| ||  ||| | ||||||||||||||||||||||| |||| || ||| ||| ||||| |||||| |||||  |  ||||| ||||||     
T  17850949 attttaggactttccatttttatctctgattcttgttttgcagatta-gctggac-gatttgctttgtt-ctgaagcccaacaaggtttatt-agcccat 17851044  T
Q  226 gctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagtcttcatgtattc 324  Q
      | ||||||||||  |||||||||||||||||||||||   ||||| | |||||| ||||||||| ||| |||||||||  |||||||||  ||| |||    
T  17851045 atttcttcagtatataaggaagacttcaagacctaattgattattcaagccgtcattctaaaaagtgtag-tttttagggttttgagtctttgtgtgttc 17851143  T
Q  325 tgctcttgtatcgtttgtgatgcaagtttag 355  Q
    | |||||||||||  | ||||||||||||||    
T  17851144 tactcttgtatcgcgt-tgatgcaagtttag 17851173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 410
Target Start/End: Original strand, 11667611 - 11667716
Alignment:
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtg-ttctttcttgtatcgtctgtgatac-tttttaggact 404  Q
    |||||||| ||||| |||| || |||||||||||||||| ||||||||||| ||    |||| | |||||||||||||| |||||||| | || ||||||    
T  11667611 ttgagtctacatgtgttctacttttgtatcgtttgtgattcaagtttagaacctttattgtgatcctttcttgtatcgtttgtgatacatgttaaggact 11667710  T
Q  405 gtgtgt 410  Q
    ||||||    
T  11667711 gtgtgt 11667716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 12753532 - 12753422
Alignment:
Q  245 aagacttcaagacctaattgtccattcatgtcgtcatact-aaaaagtttagatttttaggg-gttgagtcttcatgtattctgctcttgtatcgtttgt 342  Q
    ||||||||||||||||||| | |||||| | ||||| ||| ||||||||||| |||||||||  || ||||||  ||| |||| |||||||||||| | |    
T  12753532 aagacttcaagacctaattattcattcaagccgtcaaactaaaaaagtttag-tttttagggtttttagtctttgtgtgttctactcttgtatcgtgt-t 12753435  T
Q  343 gatgcaagtttag 355  Q
    |||||||||||||    
T  12753434 gatgcaagtttag 12753422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 355
Target Start/End: Original strand, 23477609 - 23477732
Alignment:
Q  230 cttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttgagtcttcatgtattctgctc 329  Q
    ||||||||||| |||||| | ||||||||||||     ||||| | |||||| ||||||||||||  ||||  ||  |||||||||||||| ||||  ||    
T  23477609 cttcagtataaaaggaagccatcaagacctaatgtattattcaagccgtcattctaaaaagtttatcttttagggttttgagtcttcatgtgttctattc 23477708  T
Q  330 ttgtatcgtttgtgatgcaagtttag 355  Q
    |||||||   ||||||||||||||||    
T  23477709 ttgtatc--atgtgatgcaagtttag 23477732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 25349876 - 25349908
Alignment:
Q  230 cttcagtataagaggaagacttcaagacctaat 262  Q
    ||||||||||| |||||||||||||||||||||    
T  25349876 cttcagtataaaaggaagacttcaagacctaat 25349908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 297; Significance: 1e-167; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 7 - 433
Target Start/End: Original strand, 23399648 - 23400072
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23399648 aacttattgatcaagcaacgcacatattatctaagaatcagctgtagaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaa 23399747  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    ||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  23399748 cgatcctataaatgttctgacattttaggactttccaaatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttagtgaagccc 23399847  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    ||| |||||||||||| ||| | ||||||||||  |||||||||||||||||||||||| ||||||    ||||| ||||||  |||||||||||||||     
T  23399848 aacatattatttagcctaagttgcttcagtatataaggaagacttcaagacctaattgttcattcaaactgtcattctaaaa--tttagatttttagggt 23399945  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactg- 405  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||     
T  23399946 tcgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttc-ttcttgtatcatctgtgatacttgttaggactgt 23400044  T
Q  406 tgtgtgagtattgattactctttgtact 433  Q
    | ||||||||||||||||||||||||||    
T  23400045 tttgtgagtattgattactctttgtact 23400072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 7 - 433
Target Start/End: Complemental strand, 28020010 - 28019586
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| |||| |||||| ||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28020010 aacttattgatcaagcaacgtgcatatcatctaagaatcagctataaaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaa 28019911  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||| ||    
T  28019910 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctaaaccgatctacattgttattgaagccc 28019811  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    |||| ||||||||||||||| | ||||||||||  ||||||||||||||||||||||||  ||||| | |||||| ||||||   ||||||||||||||     
T  28019810 aacgaattatttagcccaagttgcttcagtatataaggaagacttcaagacctaattgtttattcaagccgtcattctaaaa--gttagatttttagggt 28019713  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactg- 405  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||     
T  28019712 ttgagtcttcatgtattctgctcttgtctcgtttgtgatgcaagtttagaatctagtgtgtgttc-ttcttgtatcgtctgtgatacttgttaagactgt 28019614  T
Q  406 tgtgtgagtattgattactctttgtact 433  Q
    | ||||||||||||||||||||||||||    
T  28019613 tttgtgagtattgattactctttgtact 28019586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 7 - 431
Target Start/End: Original strand, 33898461 - 33898881
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  33898461 aacttattgatcaagcaacgcgcatatcttctaagaatcagctgtggaatatttctaaagtgtattttatattttaggaaatatttattattgtttggaa 33898560  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  33898561 cgatcctataaatgttccgacattttaggactttccagatttgtttatgattcttgttttgcagattaagctgaactgatctgcatt-ttactgaagtcc 33898659  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    |||| |||||||||||||| || ||||| ||||  |||||||| ||||||||||||||| |||||| |  ||||| ||||||   |||||||||||||      
T  33898660 aacgaattatttagcccaaactgcttcactatataaggaagacgtcaagacctaattgttcattcaagctgtcattctaaaa--gttagatttttaggat 33898757  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgt 406  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||| ||||||||| ||||||||||   |||||||||| ||||||||||    
T  33898758 ttgagtcttcatgtattatgctcttgtatcgtttgtgatacaaatttagaatctactgtgtgttc-ttcttgtatcaattgtgatacttgttaggactgt 33898856  T
Q  407 gtgtgagtattgattactctttgta 431  Q
    |||||||||||||||||||||||||    
T  33898857 gtgtgagtattgattactctttgta 33898881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 7 - 433
Target Start/End: Original strand, 18601112 - 18601534
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||| ||| ||||| ||    
T  18601112 aacttattgatcaagcaacgcgcatatcttctaagaatcagctgtgaaatatttctaaagtgtattttatactttaggaaatatttattatagtttgaaa 18601211  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    |||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||| |||||||||||| | |||||| ||    
T  18601212 cgatcctataaatgttccgacattttaggactttccatatttgtttatgattcttgttttgcagattaagctgaatcgatctgcattg-tgctgaagccc 18601310  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    |||| ||||| ||||||||||| ||||||||||  || |||||||||||| |||||| | |||||| | |||||| ||||||   ||||||||||||||     
T  18601311 aacgaattatgtagcccaagctgcttcagtatataagaaagacttcaagaactaattattcattcaagccgtcattctaaaa--gttagatttttagggt 18601408  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgt 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||  ||||||||||    
T  18601409 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctattgtgtgttc-ttcttgtatcgtctgtgatactagttaggactgt 18601507  T
Q  407 gtgtgagtattgattactctttgtact 433  Q
    |||||||||||||||||||||| ||||    
T  18601508 gtgtgagtattgattactctttttact 18601534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 7 - 433
Target Start/End: Complemental strand, 16384597 - 16384172
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||  ||| |||||||  |||||||||||| |||  ||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  16384597 aacttattgatcaaacaacacgcatatcttctaagaatcagttgtggaatatttctaaagtgtattttatattttaggaaatatttattattgtttggaa 16384498  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    |||||||||||||||||| ||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||| | || |||||| ||    
T  16384497 cgatcctataaatgttccaacattttaggacttcccaaatttgtttctgattcttgttttgcagattaagctgaaccgatctgca-tcttgctgaagccc 16384399  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    || | ||||||||||||||||| ||| ||||||  || || |||||||||||||||||   ||||| | | |||| || ||||||||||||||||||||     
T  16384398 aatgaattatttagcccaagctgctttagtatataagaaatacttcaagacctaattgattattcaagccatcattct-aaaagtttagatttttagggt 16384300  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgt 406  Q
    || | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  16384299 ttaactcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctattgtgtgttctttcttgtatcgtctgtgatacttgttaggactgt 16384200  T
Q  407 gtgtgagtattgattact-ctttgtact 433  Q
    |||||||||||||||||| |||||||||    
T  16384199 gtgtgagtattgattactcctttgtact 16384172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 7 - 373
Target Start/End: Complemental strand, 25117563 - 25117199
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| |||   ||||| ||||||||||| ||| |  ||||||||||||||||||||||||||||| |||||| |||||||| |||||||    
T  25117563 aacttattgatcaagcaacattcatatcatctaagaatcggctttggaatatttctaaagtgtattttatattttaagaaatacttaatattttttggaa 25117464  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||    
T  25117463 cgatcctataaatgttccgacattttaggactttccagatttgtttctgattcttgttttgcaaattaagctgaaccgatctgcatttttactgaagccc 25117364  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||  ||||| | | |||| ||||||   ||||||||||||||     
T  25117363 aacgtattatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgttaattcaagccatcattctaaaa--gttagatttttagggt 25117266  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctt 373  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||    
T  25117265 ttgagtcttcatgtattctgctcttgtatcgtttgtgaggtaagtttagaatctactgtgtgttctt 25117199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 222 - 433
Target Start/End: Complemental strand, 10191379 - 10191169
Alignment:
Q  222 ccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttgagtcttcatgta 321  Q
    ||||||| ||||| ||||  |||||||||||||||||||||| | |||||| | |||||| |||||| |||||||||||||||| |||||||||||||||    
T  10191379 ccaagctgcttcactatataaggaagacttcaagacctaattattcattcaagccgtcattctaaaa-gtttagatttttagggtttgagtcttcatgta 10191281  T
Q  322 ttctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtgtgtgagtattgatt 421  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10191280 ttctgctcttgtatcgtttgtgatgcaagtttagaatctattgtgtgttctttcttgtatcgtctgtgatacttgttaggactgtgtgtgagtattgatt 10191181  T
Q  422 actctttgtact 433  Q
    ||||||||||||    
T  10191180 actctttgtact 10191169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 93 - 355
Target Start/End: Complemental strand, 10724883 - 10724621
Alignment:
Q  93 aatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcat 192  Q
    ||||||| |||| | ||||||| | |||||| |||||||||||||||| || |||||||| ||||||||||||||||||||| ||||||||||||||| |    
T  10724883 aatattggttgggatgatcctaaagatgttctgacattttaggactttccatatttgtttttgattcttgttttgcagatta-gctgaaccgatctgctt 10724785  T
Q  193 tgttactgaagtccaacgtat-tatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagt 291  Q
    |||  | |||| |||||  |  ||||||||||||| | ||||||||||  ||| |||||||||||||||||||  |||| | | |||||| || ||||||    
T  10724784 tgtgcc-gaagcccaactaaagtatttagcccaagttgcttcagtatataagggagacttcaagacctaattgatcatttaagccgtcattctgaaaagt 10724686  T
Q  292 ttagatttttaggg-gttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttag 355  Q
     |||||||||||||  |||||||| |||||  ||| |||||||||||||||||||||||||||||    
T  10724685 gtagatttttagggttttgagtctacatgtgctctactcttgtatcgtttgtgatgcaagtttag 10724621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 93 - 355
Target Start/End: Complemental strand, 10938652 - 10938390
Alignment:
Q  93 aatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcat 192  Q
    ||||||| |||| | ||||||| | |||||| |||||||||||||||| || |||||||| ||||||||||||||||||||| ||||||||||||||| |    
T  10938652 aatattggttgggatgatcctaaagatgttctgacattttaggactttccatatttgtttttgattcttgttttgcagatta-gctgaaccgatctgctt 10938554  T
Q  193 tgttactgaagtccaacgtat-tatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagt 291  Q
    |||  | |||| |||||  |  ||||||||||||| | ||||||||||  ||| |||||||||||||||||||  |||| | | |||||| || ||||||    
T  10938553 tgtgcc-gaagcccaactaaagtatttagcccaagttgcttcagtatataagggagacttcaagacctaattgatcatttaagccgtcattctgaaaagt 10938455  T
Q  292 ttagatttttaggg-gttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttag 355  Q
     |||||||||||||  |||||||| |||||  ||| |||||||||||||||||||||||||||||    
T  10938454 gtagatttttagggttttgagtctacatgtgctctactcttgtatcgtttgtgatgcaagtttag 10938390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 40 - 410
Target Start/End: Original strand, 15161969 - 15162341
Alignment:
Q  40 agaatcagctgtataatatttctaaagt-gtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggact 138  Q
    ||||||||||||  |||||||||||||| |||||| |||||||| |||||||||  ||||| |||| |   ||||| | |||  ||||||||||||||||    
T  15161969 agaatcagctgtggaatatttctaaagtagtattt-atattttaggaaatatttgttattggttgggagattcctaaagatgacccgacattttaggact 15162067  T
Q  139 tttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaacgtat-tatttagcccaagctacttcagta 237  Q
    || || |||| ||| |||||| ||||||||| ||||| ||||||| |||||| ||||  |||||| |||||  |  ||||||||||||||| ||||||||    
T  15162068 ttccatatttttttatgattcatgttttgcaaattaa-ctgaacctatctgctttgtg-ctgaagcccaactaaagtatttagcccaagctgcttcagta 15162165  T
Q  238 taagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttag-gggttgagtcttcatgtattctgctcttgtatc 336  Q
    ||  ||| |||||||||||||||||||   ||||| | | |||| ||||||||||||||||||||| |  || ||||| |||||  ||| ||||||||||    
T  15162166 tataagggagacttcaagacctaattgattattcaagccatcattctaaaaagtttagatttttagagttttaagtctacatgtgctctactcttgtatc 15162265  T
Q  337 gtttgtgatgcaagtttagaatctagtgtgtg-ttctttcttgtatcgtctgtgatac-tttttaggactgtgtgt 410  Q
    |||| |||||||||||||||| ||   ||||| | |||||||||||||| |||||||| |  ||||||||||||||    
T  15162266 gtttatgatgcaagtttagaacctttagtgtgatcctttcttgtatcgtttgtgatacatgcttaggactgtgtgt 15162341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 355
Target Start/End: Original strand, 15699790 - 15700133
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    |||||||| |||||||| |||||||  |  | ||||||||| |  |||||| |||||||    || |||||||| ||||||||| |  |||||| | |||    
T  15699790 cttattgaccaagaaacacgcatatctttaatgaatcagctttggaatattcctaaagttgtgttcatattttaggaaatatttgaagttgttttggacg 15699889  T
Q  109 atcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaa 208  Q
     ||||| | ||||||| ||||||||||||||| || |||||| |||||||||||||||||||| | ||||| | |||||||  ||||| |||||| ||||    
T  15699890 ctcctaaagatgttcctacattttaggactttccatatttgtctctgattcttgttttgcaga-tcagctgga-cgatctgttttgtt-ctgaagcccaa 15699986  T
Q  209 c-gtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggt 307  Q
    |   | |||||  ||| |||| ||||||||||  ||| | |||||||||||||||   |||||||    ||||| ||||||||||||| ||||  ||  |    
T  15699987 caagagtatttgacccgagctgcttcagtatataagggaaacttcaagacctaatgaaccattcaatctgtcattctaaaaagtttagcttttagggttt 15700086  T
Q  308 tgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttag 355  Q
    ||||||| ||||| ||||  ||||||||| | | ||||||||||||||    
T  15700087 tgagtctacatgtgttctattcttgtatcatgt-tgatgcaagtttag 15700133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 348 - 433
Target Start/End: Complemental strand, 25117193 - 25117108
Alignment:
Q  348 aagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtgtgtgagtattgattact-ctttgtact 433  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||||  |||||||| |||||||||||||||||| |||||||||    
T  25117193 aagtttagaatctactgtgtgttctt-cttgtattgtctgtgatacttgctaggactgggtgtgagtattgattactcctttgtact 25117108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 355
Target Start/End: Complemental strand, 19659917 - 19659800
Alignment:
Q  237 ataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagtcttcatgtattctgctcttgtat 335  Q
    |||| |||||||||||||||||||||| |  ||||| | |||||| ||||||||||||| |||||||||  |||||||||  ||| |||| |||||||||    
T  19659917 ataaaaggaagacttcaagacctaattatgtattcaagccgtcattctaaaaagtttag-tttttagggttttgagtctttgtgtgttctactcttgtat 19659819  T
Q  336 cgtttgtgatgcaagtttag 355  Q
     || | ||||||||||||||    
T  19659818 tgtgt-tgatgcaagtttag 19659800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 33746389 - 33746279
Alignment:
Q  245 aagacttcaagacctaattgtccattcatgtcgtcatactaaaaa-gtttagatttttaggggttgagtcttcatgtattctgctcttgtatcgtttgtg 343  Q
    ||||||||||||||||||| | |||||| | ||||| |||||||| |||||| |||| |||  |||||||||  ||| |||| ||||||||| || | ||    
T  33746389 aagacttcaagacctaattattcattcaagccgtcaaactaaaaaggtttagtttttaaggttttgagtctttgtgtgttctcctcttgtattgtgt-tg 33746291  T
Q  344 atgcaagtttag 355  Q
    ||||||||||||    
T  33746290 atgcaagtttag 33746279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 355
Target Start/End: Original strand, 19183357 - 19183481
Alignment:
Q  230 cttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagtcttcatgtattctgct 328  Q
    ||||||||| | |||||||| ||||||||||||||  |||||| | |||||| ||||||||||||| ||| |||||  ||| |||||  ||| ||||  |    
T  19183357 cttcagtatgaaaggaagacatcaagacctaattgatcattcaagacgtcattctaaaaagtttag-tttgtagggttttgtgtctttgtgtgttctatt 19183455  T
Q  329 cttgtatcgtttgtgatgcaagtttag 355  Q
    |||||||||| | ||||||||||||||    
T  19183456 cttgtatcgtgt-tgatgcaagtttag 19183481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 7 - 433
Target Start/End: Original strand, 25130 - 25551
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| | ||| ||||| |||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25130 aacttattgatcaagcatcgcacatatcatctaagaatcagctgttgaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaa 25229  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  25230 cgatcctataaatgttccgacattttaggactttccagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcatt-ttactgaagccc 25328  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    |||| ||||||||||||||||| ||||||||||  |||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||     
T  25329 aacgaattatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgttcattcaagtcgtcatactaaaaaggttagatttttagggt 25428  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgt 406  Q
    ||||||||||||||||||| ||| |||||||||||||||||| |||||||||||| | | |||||||||||||||||| ||||||||||||||     ||    
T  25429 ttgagtcttcatgtattctactcgtgtatcgtttgtgatgcacgtttagaatctactatatgttctttcttgtatcgtttgtgatacttttta-----gt 25523  T
Q  407 gtgtgagtattgattact-ctttgtact 433  Q
    |||||||||||||||||| |||||||||    
T  25524 gtgtgagtattgattactcctttgtact 25551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 296; Significance: 1e-166; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 10 - 433
Target Start/End: Original strand, 24789614 - 24790036
Alignment:
Q  10 ttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacga 109  Q
    ||||||| |||| |||| || ||| |||||||||||||||||  |||||| |||||||||||||||||||||| |||| |||||||||||||||||||||    
T  24789614 ttattgaccaagcaacgtgcttatcatctaagaatcagctgtggaatattactaaagtgtattttatattttaggaaaaatttaatattgtttggaacga 24789713  T
Q  110 tcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaac 209  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||| |||||    
T  24789714 tcctataaatgttccgacattttaggactttccagatttgtttctgattcttgttttgcagattaagctgaatccatttgcattgttactgaagcccaac 24789813  T
Q  210 gtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttg 309  Q
     |||||||||||||||||| ||||||||||  || ||||||||||||||||||||| |||||| | |||||| || |||||||||||||||||||| |||    
T  24789814 atattatttagcccaagctgcttcagtatataagtaagacttcaagacctaattgttcattcaagccgtcattct-aaaagtttagatttttagggtttg 24789912  T
Q  310 agtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtgtg 409  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||    
T  24789913 agtcttcgtgtattctactcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctgtcttgtatcgtctgtgatacttgttaggactgtttg 24790012  T
Q  410 tgagtattgattactctttgtact 433  Q
    ||||||||||||||||||||||||    
T  24790013 tgagtattgattactctttgtact 24790036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 7 - 433
Target Start/End: Complemental strand, 12911199 - 12910772
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||  |||||||||||||||||| |||||||||| |||||||||| ||||||||||||    
T  12911199 aacttattgatcaagcaacgcgcgtatcatctaagaatcagctgtgaaatatttctaaagtgtatcttatattttaggaaatatttattattgtttggaa 12911100  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||| ||    
T  12911099 cgatcctataaatgttccgacattttaggactttccagatttgtttctgatttttgttttgcagattaagctgaaccgatctgcattg-tgctgaagccc 12911001  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    |||| |||||||||||||| || ||||||||||  ||||||| ||||||||||||||||  ||||| | ||||||  | ||||||||||||||||||||     
T  12911000 aacgaattatttagcccaaactgcttcagtatataaggaagatttcaagacctaattgtttattcaagccgtcattat-aaaagtttagatttttagggt 12910902  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgt 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  12910901 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatacttgttaggattgt 12910802  T
Q  407 gtgtgagtattg---attactctttgtact 433  Q
    ||||||||||||   |||||||||||||||    
T  12910801 gtgtgagtattgatcattactctttgtact 12910772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 7 - 433
Target Start/End: Complemental strand, 22611598 - 22611174
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| |||||||||||  |||||||||||||| |  ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22611598 aacttattgatcaagcaacgcgcatatcttctaagaatcagctatggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaa 22611499  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    ||||| |||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  22611498 cgatcttataaatgttccgacattttaggactttccaaatttgtttatgattcttgttttgcagattaagctgaaccgatctgcatttttactgaagccc 22611399  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    |||||||||||||||||||| | ||||||||||  |||||||||||||||||||||||| | |||| | |||||| ||||||   ||||||||||| ||     
T  22611398 aacgtattatttagcccaaggtgcttcagtatataaggaagacttcaagacctaattgttccttcaagccgtcattctaaaa--gttagatttttacggt 22611301  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgt 406  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||| |||| |||||    
T  22611300 ttgagtcttcatgtattctgttcttgtaccgtttgttatgcaagtttagaatctattgtgtgttctttcttgtatcgtttgtgatacttgttagaactgt 22611201  T
Q  407 gtgtgagtattgattactctttgtact 433  Q
    |||||||||||||||||||||||||||    
T  22611200 gtgtgagtattgattactctttgtact 22611174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 7 - 433
Target Start/End: Complemental strand, 23759331 - 23758907
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| |||| |||||| || |||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23759331 aacttattgatcaagcaacgtgcatatcatataagaatcagttgtagaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaa 23759232  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||    
T  23759231 cgatcctataaatgttccaacattttaggactttctagatttgtttctgattcttgttttgtagattaagctgaaacgatctgcattgttactgaagccc 23759132  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    |||||||||||||||||||||| |||||||| |    ||||| || ||||||||||||  |||||| | |||||| ||||||   ||||||||||||||     
T  23759131 aacgtattatttagcccaagctgcttcagtacatatagaagagttgaagacctaattgcacattcaagccgtcattctaaaa--gttagatttttagggt 23759034  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgt 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| ||||||||||    
T  23759033 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctactgtgtattctttcttgtatcgtctgtggtacttgttaggactgt 23758934  T
Q  407 gtgtgagtattgattactctttgtact 433  Q
     ||||||||||||||||||||||||||    
T  23758933 ttgtgagtattgattactctttgtact 23758907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 230 - 355
Target Start/End: Complemental strand, 19445086 - 19444962
Alignment:
Q  230 cttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagtcttcatgtat-tctgc 327  Q
    ||||||||||| |||||||||||||||||||||| || ||||  | |||||| ||||||||||||| |||||||||  |||||||||  ||||| ||| |    
T  19445086 cttcagtataaaaggaagacttcaagacctaattatctattctagccgtcattctaaaaagtttag-tttttagggttttgagtctt-ttgtatgtctac 19444989  T
Q  328 tcttgtatcgtttgtgatgcaagtttag 355  Q
    ||||||||||| | ||||||||||||||    
T  19444988 tcttgtatcgtgt-tgatgcaagtttag 19444962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 305
Target Start/End: Complemental strand, 21530867 - 21530793
Alignment:
Q  230 cttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg 305  Q
    ||||||||||| |||||||||||||||||||||||   ||||| |  ||||| ||||||||||||| |||||||||    
T  21530867 cttcagtataaaaggaagacttcaagacctaattgaatattcaagctgtcattctaaaaagtttag-tttttaggg 21530793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 294; Significance: 1e-165; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 7 - 428
Target Start/End: Complemental strand, 22485840 - 22485421
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| ||| ||||||| || ||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  22485840 aacttattgatcaagcaacacgcatatcatttaagaatcagctgtggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttagaa 22485741  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||    
T  22485740 cgatcctataaatgttccgacattttaggactttccagatttgtttctgattcttgttttgcagattaagctgaatcgatctgcatt-ttactgaagccc 22485642  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    || | | | ||||||||||| | ||||||||||  |||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||| |||     
T  22485641 aatgaaatctttagcccaagttgcttcagtatataaggaagacttcaagacctaattgttcattcaagccgtcatactaaaaagtttagattttttgggt 22485542  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgt 406  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||    
T  22485541 ttgagtcttcatgtattctgctcttgtatcatttgtgatgcaagtttagaatctagtgtatgttc-ttcttgtatcgtctgtgatacttgttaggactgt 22485443  T
Q  407 gtgtgagtattgattactcttt 428  Q
    ||||||||||| ||||||||||    
T  22485442 gtgtgagtattaattactcttt 22485421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 9 - 420
Target Start/End: Original strand, 23540861 - 23541273
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    ||||||||| ||| |||||||||||  ||||||||||||||||  ||||||||||||||  ||||||||||||| |||||||||  ||||| ||||||||    
T  23540861 cttattgattaagcaacgcgcatatcttctaagaatcagctgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacg 23540960  T
Q  109 atcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaa 208  Q
    ||||||||||||||| |||||||| ||||||| || ||||||||||||||||||||||||||||| || ||||||||||||| ||| | |||||  ||||    
T  23540961 atcctataaatgttctgacatttttggactttccatatttgtttctgattcttgttttgcagatt-agttgaaccgatctgctttg-tgctgaaacccaa 23541058  T
Q  209 cgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gt 307  Q
    |  | ||||||||||||||| ||||| ||||  ||||||||| ||| ||||||||   |||||| ||||||||||||||||||||||||||||||||  |    
T  23541059 ctaagtatttagcccaagctgcttcaatatataaggaagactccaatacctaattaatcattcaagtcgtcatactaaaaagtttagatttttagggttt 23541158  T
Q  308 tgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatc--tagtgtgtgttctttcttgtatcgtctgtgatactt-tttaggact 404  Q
    |||||||| ||||||||||||||| |||| | | ||||||||||||||||||  || ||||| || ||||||||||||| |||||||||| ||||||| |    
T  23541159 tgagtctttatgtattctgctcttttatcatgt-tgatgcaagtttagaatctttactgtgtcttatttcttgtatcgtttgtgatacttgtttaggatt 23541257  T
Q  405 gtgtgtgagtattgat 420  Q
    ||||||||||||||||    
T  23541258 gtgtgtgagtattgat 23541273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 39 - 409
Target Start/End: Complemental strand, 45136786 - 45136418
Alignment:
Q  39 aagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggact 138  Q
    |||||||||||||  |||||||||||||| |||||||||||||| |||||||||  ||||| ||||||||||||||||||||||||||||||||||||||    
T  45136786 aagaatcagctgtggaatatttctaaagtatattttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggact 45136687  T
Q  139 tttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaacgtattatttagcccaagctacttcagtat 238  Q
    || || |||||||| |||||||||||||||||||| |||||||| ||| ||| ||| | |||||| |||||  | |||||| | |||||| ||| |||||    
T  45136686 ttccatatttgtttatgattcttgttttgcagatt-agctgaactgatttgctttg-tgctgaagcccaactaagtatttatctcaagctgcttgagtat 45136589  T
Q  239 aagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagtcttcatgtattctgctcttgtatcg 337  Q
    |  |||||||||||||||||||||||   ||||| | |||||||||||||||| |||||||||||||  ||||||||| |||   |||  ||||||||||    
T  45136588 ataaggaagacttcaagacctaattgattattcaagccgtcatactaaaaagtatagatttttagggttttgagtctttatgagctctattcttgtatcg 45136489  T
Q  338 tttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactt-tttaggactgtgtg 409  Q
    |||||||||||||| ||||| |||   ||||||| |||||||||||| |||||||||| ||||||||||||||    
T  45136488 tttgtgatgcaagtctagaaccta--ttgtgttccttcttgtatcgtttgtgatacttgtttaggactgtgtg 45136418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 40 - 409
Target Start/End: Original strand, 27924938 - 27925307
Alignment:
Q  40 agaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactt 139  Q
    ||||||| ||||  ||||||||||||||  ||||||||||||| |||||||||  ||||| |||||||||||||| | ||||||||||||||||||||||    
T  27924938 agaatcaactgtggaatatttctaaagtagattttatattttatgaaatatttgttattggttggaacgatcctaaagatgttccgacattttaggactt 27925037  T
Q  140 ttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaacgtattatttagcccaagctacttcagtata 239  Q
    | || ||||||||||||||||||||||||||||| |||||||||||||||| ||| |  ||||| |||||  | ||||||||||||||| ||||||||||    
T  27925038 tccatatttgtttctgattcttgttttgcagatt-agctgaaccgatctgctttg-tgttgaag-ccaactaagtatttagcccaagctgcttcagtata 27925134  T
Q  240 agaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagg-ggttgagtcttcatgtattctgctcttgtatcgt 338  Q
      ||| |||||||||||||||||||  |||||| |  | |||||||||||| |||||||||||||   |||||||| ||||| ||||  |||| |||| |    
T  27925135 taagggagacttcaagacctaattgatcattcaagctggcatactaaaaaggttagatttttaggattttgagtctacatgtgttctattcttttatcat 27925234  T
Q  339 ttgtgatgcaagtttagaatctagtgtgtg-ttctttcttgtatcgtctgtgatactt-tttaggactgtgtg 409  Q
    ||||||||||||||||||| |||   |||| | |||||||||||||| |||||||||| ||||||||||||||    
T  27925235 ttgtgatgcaagtttagaacctatattgtgatcctttcttgtatcgtttgtgatacttgtttaggactgtgtg 27925307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 22476794 - 22476635
Alignment:
Q  100 tttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttact 199  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  22476794 tttggaacgatcctataaatgttccgacattttaggactttccagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcatt-taact 22476696  T
Q  200 gaagtccaacgtattatttagcccaagctacttcagtataagaggaagacttcaagaccta 260  Q
    |||| |||| | | ||||||||||||||| ||||||||||  |||||||||| ||||||||    
T  22476695 gaagcccaatgaaatatttagcccaagctgcttcagtatataaggaagacttgaagaccta 22476635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 319 - 428
Target Start/End: Complemental strand, 22476626 - 22476518
Alignment:
Q  319 gtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtgtgtgagtattg 418  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||| |||||||||||||    
T  22476626 gtattctgctcttgtatcatttgtgatgcaagtttagaatctagtgtgtattctt-cttgtatcgtctgtgatacttgttaggactatgtgtgagtattg 22476528  T
Q  419 attactcttt 428  Q
    ||||||||||    
T  22476527 attactcttt 22476518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 410
Target Start/End: Complemental strand, 33977764 - 33977362
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagt-gtattttatattttacgaaatatttaatattgtttggaac 107  Q
    ||||||||||||| || ||||||||  |   |||||||| |||  |||||| ||||||| |||||| || ||||| |||| ||||  ||||| || | ||    
T  33977764 cttattgatcaagcaatgcgcatatctttacagaatcagttgtggaatattcctaaagtagtattt-attttttaggaaaaatttgttattgatttggac 33977666  T
Q  108 gatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcca 207  Q
    ||||||| | ||||||||||||||||||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||| ||||| |||||| |||    
T  33977665 gatcctagagatgttccgacattttaggactttacatatttgtctctgattc-tgttttgcagatt-agctgaaccgatctgctttgtt-ctgaagccca 33977569  T
Q  208 ac-gtattatttagcccaagctacttcagtataa---gaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagattttt-a 302  Q
    ||   | |||||  ||| |||| ||| |||||||    ||  |||||||||||||||||   | ||||| | |||||| || |||||||||||||||| |    
T  33977568 actaaagtatttgacccgagctgctt-agtataatataagtgagacttcaagacctaatcaactattcaagccgtcattct-aaaagtttagatttttaa 33977471  T
Q  303 ggggttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatc--tagtgtgtgttctttcttgtatcgtctgtgatac-ttttta 399  Q
    ||  |||||||| |||||  ||| |||||||||| | | |||| |||||||||||||  || |||| |  |||||| |||||||||||||||| | ||||    
T  33977470 ggttttgagtctacatgtgctctactcttgtatcatgt-tgattcaagtttagaatctttattgtgag-cctttctcgtatcgtctgtgatacatgttta 33977373  T
Q  400 ggactgtgtgt 410  Q
    |||||||||||    
T  33977372 ggactgtgtgt 33977362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 214 - 414
Target Start/End: Original strand, 13660030 - 13660232
Alignment:
Q  214 tatttagcccaagctacttcagtata-agaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttgagt 312  Q
    ||||||||||||||| |||||||||| | ||||| |||||||||||||||||  |||||| ||||| |||||||||| |||| |||||   |  ||||||    
T  13660030 tatttagcccaagctgcttcagtatataaaggaa-acttcaagacctaattgatcattcaagtcgttatactaaaaaatttaaattttagagttttgagt 13660128  T
Q  313 cttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtg-ttctttcttgtatcgtctgtgatactt-tttaggactgtgtgt 410  Q
    || |||||  |||  |||||||||||||||||||||||||||||| ||    |||| | |||||||||||| | |||||||||| ||||| ||||| |||    
T  13660129 ctacatgtgctctattcttgtatcgtttgtgatgcaagtttagaacctttattgtgatactttcttgtatcatatgtgatacttgtttagaactgtatgt 13660228  T
Q  411 gagt 414  Q
    ||||    
T  13660229 gagt 13660232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 214 - 414
Target Start/End: Original strand, 13718673 - 13718875
Alignment:
Q  214 tatttagcccaagctacttcagtata-agaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttgagt 312  Q
    ||||||||||||||| |||||||||| | ||||| |||||||||||||||||  |||||| ||||| |||||||||| |||| |||||   |  ||||||    
T  13718673 tatttagcccaagctgcttcagtatataaaggaa-acttcaagacctaattgatcattcaagtcgttatactaaaaaatttaaattttagagttttgagt 13718771  T
Q  313 cttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtg-ttctttcttgtatcgtctgtgatactt-tttaggactgtgtgt 410  Q
    || |||||  |||  |||||||||||||||||||||||||||||| ||    |||| | |||||||||||| | |||||||||| ||||| ||||| |||    
T  13718772 ctacatgtgctctattcttgtatcgtttgtgatgcaagtttagaacctttattgtgatactttcttgtatcatatgtgatacttgtttagaactgtatgt 13718871  T
Q  411 gagt 414  Q
    ||||    
T  13718872 gagt 13718875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 124 - 410
Target Start/End: Complemental strand, 33962331 - 33962043
Alignment:
Q  124 cgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaac-gtattatttagcc 222  Q
    ||||||||||||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||| ||||| |||||| |||||   | |||||  ||    
T  33962331 cgacattttaggactttacatatttgtctctgattc-tgttttgcagatt-agctgaaccgatctgctttgtt-ctgaagcccaactaaagtatttgacc 33962235  T
Q  223 caagctacttcagtataa---gaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagattttt-aggggttgagtcttcat 318  Q
    | |||| |||||||||||    ||  |||||||||||||||||   | ||||| | |||||| || |||||||||||||||| ||   |||||||| |||    
T  33962234 cgagctgcttcagtataatataagtgagacttcaagacctaatgaactattcaagccgtcattct-aaaagtttagatttttaagattttgagtctacat 33962136  T
Q  319 gtattctgctcttgtatcgtttgtgatgcaagtttagaa--tctagtgtgtgttctttcttgtatcgtctgtgatac-tttttaggactgtgtgt 410  Q
    ||  ||| ||||||||||  |  ||||||||||||||||  | || |||| |  |||||| |||||||||||||||| | |||||||||||||||    
T  33962135 gtgctctactcttgtatc-ctgctgatgcaagtttagaacctttattgtgag-cctttctcgtatcgtctgtgatacatgtttaggactgtgtgt 33962043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 196
Target Start/End: Complemental strand, 26536992 - 26536807
Alignment:
Q  9 cttattgatcaagaaacgcgcatat-tatctaagaatcagctgtataatatttctaaagt-gtattttatattttacgaaatatttaatattgtttggaa 106  Q
    |||||||| |||| ||||||||||| | |  || |||||| |||  |||||| ||||||| ||| ||||||||||| |||||||||  |||||||| | |    
T  26536992 cttattgaccaagcaacgcgcatatctttacaaaaatcagttgtgaaatattcctaaagtagta-tttatattttatgaaatatttgttattgttttgga 26536894  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgtt 196  Q
    |||| ||| | |||||||||||||||||||| || || ||||||   |||||| | ||||||||||| |||||||||||| ||| |||||    
T  26536893 cgatactaaagatgttccgacattttaggac-ttccatatttgtcgttgattc-tattttgcagatt-agctgaaccgatatgctttgtt 26536807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 320
Target Start/End: Complemental strand, 24092443 - 24092353
Alignment:
Q  230 cttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttgagtcttcatgt 320  Q
    ||||||||||  ||| ||||||||| |||||||||   ||||| | |||||| ||||||||||||||||||  ||| |||||||| |||||    
T  24092443 cttcagtatataagggagacttcaacacctaattgagtattcaagccgtcattctaaaaagtttagattttaggggtttgagtctacatgt 24092353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 25240846 - 25240776
Alignment:
Q  230 cttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttt 300  Q
    ||||||||||  ||||||||||||||||||||||    ||||| | |||||||||||||||||||| ||||    
T  25240846 cttcagtatagaaggaagacttcaagacctaattaggtattcaagccgtcatactaaaaagtttagctttt 25240776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 7 - 433
Target Start/End: Complemental strand, 159778 - 159355
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  159778 aacttattgatcaagcaacgcgcatatcatctaagaatcaactgtggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaa 159679  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    ||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||    
T  159678 cgatcctataaatgttctgacattttaggtctttccagatttgtttctgattcttgttttgcagattaagccgaaccgatctgcatt-ttactgaagccc 159580  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    |||| ||||||||||||||| | |||||||| |  | ||||||||||||||||||||||||||||| | |||||| ||||||   |||||||||||||      
T  159579 aacgaattatttagcccaagttgcttcagtacataaagaagacttcaagacctaattgtccattcaagccgtcattctaaaa--gttagatttttaggct 159482  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgt 406  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||    
T  159481 ttgagtcttcgtatattctgctcttgtatcgtttgtgatgcaagtttagaatctattgtgttttctttcttgtatcgtctgtgatacttgttaggactgt 159382  T
Q  407 gtgtgagtattgattactctttgtact 433  Q
    |||||||||||||||||||||||||||    
T  159381 gtgtgagtattgattactctttgtact 159355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 291; Significance: 1e-163; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 7 - 433
Target Start/End: Original strand, 17527336 - 17527762
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17527336 aacttattgatcaagcaacgcgcatatcatctaagaatcaactgtgaaatatttctaaagtgtattttatattttaagaaatatttaatattgtttggaa 17527435  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||||||||||| ||||||| |||||| ||||||||| ||    
T  17527436 cgatcctataaatgttccgacattttaggactttctagatttctttctgattcttgtttagcagattaagctaaaccgatatgcattcttactgaagccc 17527535  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    |||  ||||||||||||||||| ||||||||||  |||||||||| ||||||||||||  |||||| | ||||||||||||||||||||| ||||||||     
T  17527536 aacaaattatttagcccaagctgcttcagtatataaggaagactttaagacctaattgctcattcaagccgtcatactaaaaagtttagaattttagggt 17527635  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgt 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |    
T  17527636 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctactgtgtgttctttcttttatcgtctttgatacttgttaggacttt 17527735  T
Q  407 gtgtgagtattgattactctttgtact 433  Q
    ||||  |||||||||| ||||||||||    
T  17527736 gtgtttgtattgattattctttgtact 17527762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 7 - 433
Target Start/End: Complemental strand, 23879592 - 23879169
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| ||| ||||||| ||||||||||||| |||  ||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  23879592 aacttattgatcaagcaacacgcatatcatctaagaatcagttgtggaatatttctaaagtgtattttatattttgggaaatatttaatattgtttggaa 23879493  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| ||    
T  23879492 cgatcctataaatgttccgacattttaggactttccagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcatt-ttgttgaagccc 23879394  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    |||| ||||||||||||||||| |||||| |||  |||||||||||||||||||| ||| |||||| | |||||| || |||||||||||||||| |||     
T  23879393 aacgaattatttagcccaagctgcttcagcatataaggaagacttcaagacctaa-tgttcattcaagccgtcattct-aaaagtttagatttttcgggt 23879296  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgt 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||| |||||||||| ||||||||||    
T  23879295 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctactgtgtgttctttcttacatcgtttgtgatacttgttaggactgt 23879196  T
Q  407 gtgtgagtattgattactctttgtact 433  Q
    |||||||||||||||||||||||||||    
T  23879195 gtgtgagtattgattactctttgtact 23879169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 7 - 433
Target Start/End: Original strand, 9281162 - 9281585
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||||  ||||||||||||||||||||||| ||||| |||||||||| |||||||| |||    
T  9281162 aacttattgatcaagcaacgcgcatatcatcaaagaatcagctgtgaaatatttctaaagtgtattttatgttttaggaaatatttattattgtttagaa 9281261  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||    
T  9281262 cgatcctataaatgttccgacattttagaactttccagatttgtttctgattcttgttttacagattaagctgaaccgatctgcatt-ttactgaagccc 9281360  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    ||||  |||||||||||||||| ||||||||||  |||||||||||||||||||||||| |||||| |  ||||| || ||||||||| |||| |||||     
T  9281361 aacgagttatttagcccaagctgcttcagtata--aggaagacttcaagacctaattgttcattcaagcagtcattct-aaaagtttaaatttgtagggt 9281457  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgt 406  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  9281458 ttgagtcttcatgtattctgctcttgtatcatttgtgatgcaagtttagaatctattgtgtgttctttcttgtatcgtttgtgatacttgttaggactgt 9281557  T
Q  407 gtgtgagtattgattact-ctttgtact 433  Q
    |||||||||||||||||| |||||||||    
T  9281558 gtgtgagtattgattactcctttgtact 9281585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 7 - 428
Target Start/End: Complemental strand, 17235301 - 17234881
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| ||| |||||||  |||||||||||| |||  |||||||||||| |  || |||||||||| |||||||||| ||||||||||||    
T  17235301 aacttattgatcaagcaacacgcatatcttctaagaatcagatgtggaatatttctaaattagatattatattttaggaaatatttattattgtttggaa 17235202  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
     ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||  |||||| ||    
T  17235201 tgatcctataaatgttccgacattttaggactttccagatttgtttctgattcttgttttgcagatta-gctgaaccgatctgctttgtg-ctgaagccc 17235104  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    |||  ||||||||||||||| | ||| ||||||  | |||||||||||||||||||||| |||||| | |||||||||||||||||||||| |||||||     
T  17235103 aacaaattatttagcccaagttgctttagtatataaagaagacttcaagacctaattgttcattcaagccgtcatactaaaaagtttagatctttagggt 17235004  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactt-tttaggactg 405  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  17235003 tttagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctaatgtgtgttctttcttgtatcgtttgtgatacttgtttaggactg 17234904  T
Q  406 tgtgtgagtattgattactcttt 428  Q
    |||||||||||||| ||||||||    
T  17234903 tgtgtgagtattgaatactcttt 17234881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 9 - 420
Target Start/End: Complemental strand, 33666496 - 33666088
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    ||||||||||||| ||||||||||   |||||||||||| |||  ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  33666496 cttattgatcaagtaacgcgcataacttctaagaatcagttgtggaatatttctaaagtgtattttatattttaggaaatatttattattgtttggaacg 33666397  T
Q  109 atcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaa 208  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||| ||||    
T  33666396 atcctataa-tgttccgacattttaggactttccagatttgtttctgattattgttttgcagattaagctgaaccgatctgcatt-ttgctgaagcccaa 33666299  T
Q  209 cgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggtt 308  Q
    |  ||||||||||||||||| ||||||||||  ||||||||||||||||||||||||  ||||| | | |||| |||||| |||||||||||||||| ||    
T  33666298 caaattatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgtttattcaagccatcattctaaaa-gtttagatttttagggttt 33666200  T
Q  309 gagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtgt 408  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||| |||||||||| |||||| |||||    
T  33666199 gagtcttcatgtattatgctcttgtatcgcttgtgatgcaagtttagaatatatcgtgtgttctttcttgtatcgtttgtgatacttgttaggattgtgt 33666100  T
Q  409 gtgagtattgat 420  Q
    ||||||||||||    
T  33666099 gtgagtattgat 33666088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 9 - 427
Target Start/End: Complemental strand, 19100602 - 19100187
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    ||||||||||||| ||| | |||||  ||||||||||||||||  |||||||| |||||  ||||||||||||| |||||||||| ||||| ||||||||    
T  19100602 cttattgatcaagcaacacacatatcttctaagaatcagctgtggaatatttccaaagtagattttatattttaggaaatatttattattggttggaacg 19100503  T
Q  109 atcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaa 208  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||| ||| | |||||| ||||    
T  19100502 atcctataaatgttccgacattttaggactttccagatttgtttatgattcttgttttgcagatt-agctgaaccgatctgctttg-tgctgaagcccaa 19100405  T
Q  209 cgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaa-ttgtccattcatgtcgtcatactaaaaagtttagatttttaggggt 307  Q
    | || ||||||||||||||| ||||||||||  |||||||||||||||||||| || |  ||||| | ||||||| ||| ||||||||| |||||||| |    
T  19100404 cttagtatttagcccaagctgcttcagtata--aggaagacttcaagacctaatttttttattcaagccgtcatagtaacaagtttaga-ttttagggtt 19100308  T
Q  308 tgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactt-tttaggactgt 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||    
T  19100307 tgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctactgtgtgttctttcttgtatcgtctgtgatacttgtttaggattgt 19100208  T
Q  407 gtgtgagtattgattactctt 427  Q
    ||||||||||||| |||||||    
T  19100207 gtgtgagtattgaatactctt 19100187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 15 - 428
Target Start/End: Complemental strand, 13196023 - 13195611
Alignment:
Q  15 gatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacgatccta 114  Q
    ||||||| |||||||||||  ||||||||||||||||  ||||||||||||||  || |||||||||| |||||||||| ||||||||||||||||||||    
T  13196023 gatcaagcaacgcgcatatcttctaagaatcagctgtggaatatttctaaagtagatattatattttaggaaatatttattattgtttggaacgatccta 13195924  T
Q  115 taaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaacgtatt 214  Q
    ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| | |||||| |||||  | |    
T  13195923 taaatatgccgacattttaggacttttcagatttgtttctgattcttgttttgcagatt-agcagaaccgatctgctttg-tgctgaagcccaactaagt 13195826  T
Q  215 atttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttgagtct 314  Q
    |||||||||||||| ||||||||||  | |||||||  |||||||||||||  ||||| | ||| |||||||||||||||||||||||||| ||||||||    
T  13195825 atttagcccaagctgcttcagtatataaagaagactgtaagacctaattgtttattcaagccgttatactaaaaagtttagatttttagggtttgagtct 13195726  T
Q  315 tcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactt-tttaggactgtgtgtgag 413  Q
    ||||||||| |||| || ||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||| ||||||||||||||||||    
T  13195725 tcatgtattatgctattttatcgtttgtgatgcaagtttagaatctactgtgttttctttcttggatcgtctgtgatacttgtttaggactgtgtgtgag 13195626  T
Q  414 tattgattactcttt 428  Q
    |||||| ||||||||    
T  13195625 tattgaatactcttt 13195611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 7 - 433
Target Start/End: Complemental strand, 17855902 - 17855477
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| || ||||||||  ||||||||||||||||  |||||||| |||||||||||||||||||| |||||||||| ||||||| ||||    
T  17855902 aacttattgatcaagcaatgcgcatatcttctaagaatcagctgtggaatatttcgaaagtgtattttatattttaggaaatatttattattgttcggaa 17855803  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||| ||    
T  17855802 cgatcctataaatgttccgacattttaggactttccagatttgtttctgcttcttgttttgcagattaagctgaaccgatctgaatt-ttactgaagccc 17855704  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    ||||  |||||||| ||||||| ||||||||||  |||||||||||||||||||||| |  ||||| |  ||||| || |||   |||||||||| |||     
T  17855703 aacgagttatttag-ccaagctgcttcagtatataaggaagacttcaagacctaattctttattcaagctgtcattctgaaa--gttagatttttggggt 17855607  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgt 406  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||| ||||||||||    
T  17855606 ttgagtctttatgtattatgctcttgtatcgtttgtgatgcaagtttagaatctattgtgtgttc-ttcttgtatcgtttgtgatacttgttaggactgt 17855508  T
Q  407 gt----gtgagtattgattactctttgtact 433  Q
    ||    |||||||||||||||||||| ||||    
T  17855507 gtgtgagtgagtattgattactctttctact 17855477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 70 - 433
Target Start/End: Complemental strand, 25969984 - 25969624
Alignment:
Q  70 attttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgca 169  Q
    |||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||| |||||||  || ||||||| ||| ||||||||||||||||    
T  25969984 attttatattttagtaaatatttattattgtttggaacgatcctataaatgttccgacactttaggaacttccagatttatttttgattcttgttttgca 25969885  T
Q  170 gattaagctgaaccgatctgcattgttactgaagtccaacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccat 269  Q
    | ||| |||||||||||||||| |||  |||||| |||||| ||||||||||||||||| ||||||||||  |||||||||||||||||||||||| |||    
T  25969884 gctta-gctgaaccgatctgcaatgtg-ctgaagcccaacgaattatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgttcat 25969787  T
Q  270 tcatgtcgtcatactaaaaagtttagatttttaggggttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgt 369  Q
    ||| | ||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  25969786 tcaagccgtcatactaaaaagtt-agatttttagggtttgagtcttcatgtgttctgctcttgtatcgtttgtgatgcaagtttagaatctactgtgtgt 25969688  T
Q  370 tctttcttgtatcgtctgtgatactttttaggactgtgtgtgagtattgattactctttgtact 433  Q
    |||||||| |||||||| |||||||| |||||||| |||||  ||||||||||||| |||||||    
T  25969687 tctttcttttatcgtctatgatacttgttaggactttgtgtacgtattgattactccttgtact 25969624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 70 - 433
Target Start/End: Complemental strand, 25974424 - 25974064
Alignment:
Q  70 attttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgca 169  Q
    |||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||| |||||||  || ||||||| ||| ||||||||||||||||    
T  25974424 attttatattttagtaaatatttattattgtttggaacgatcctataaatgttccgacactttaggaacttccagatttatttttgattcttgttttgca 25974325  T
Q  170 gattaagctgaaccgatctgcattgttactgaagtccaacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccat 269  Q
    | ||| |||||||||||||||| |||  |||||| |||||| ||||||||||||||||| ||||||||||  |||||||||||||||||||||||| |||    
T  25974324 gctta-gctgaaccgatctgcaatgtg-ctgaagcccaacgaattatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgttcat 25974227  T
Q  270 tcatgtcgtcatactaaaaagtttagatttttaggggttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgt 369  Q
    ||| | ||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  25974226 tcaagccgtcatactaaaaagtt-agatttttagggtttgagtcttcatgtgttctgctcttgtatcgtttgtgatgcaagtttagaatctactgtgtgt 25974128  T
Q  370 tctttcttgtatcgtctgtgatactttttaggactgtgtgtgagtattgattactctttgtact 433  Q
    |||||||| |||||||| |||||||| |||||||| |||||  ||||||||||||| |||||||    
T  25974127 tctttcttttatcgtctatgatacttgttaggactttgtgtacgtattgattactccttgtact 25974064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 9 - 419
Target Start/End: Original strand, 13869856 - 13870260
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    ||||||||||||| ||| |||||||  ||||||||| || |||  ||||||||||||||  || |||||||||| |||||||||| |||||||| |||||    
T  13869856 cttattgatcaagcaacacgcatatcttctaagaattagttgtggaatatttctaaagtagatattatattttaggaaatatttattattgtttagaacg 13869955  T
Q  109 atcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaa 208  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||| ||| ||| | |||||| ||||    
T  13869956 atcctataaatgttccgacattttaggactttcaagatttgtttctgattcttgttttgcagatt-agctgaaccgatgtgctttg-tgctgaagcccaa 13870053  T
Q  209 cgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggtt 308  Q
    |  ||||||||||||  ||||||||||||||  ||||||||||||||||| | || | |||||| |  ||||| || | |||||||||||||||||| ||    
T  13870054 caaattatttagcccgtgctacttcagtatataaggaagacttcaagacccagttattcattcaagctgtcattct-acaagtttagatttttagggttt 13870152  T
Q  309 gagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtgt 408  Q
    |||   |||||||||||||||||||||||||||||| |||||||||||||| |  ||||||||||||||||||||| |||||||||| ||||||||||||    
T  13870153 gag---tcatgtattctgctcttgtatcgtttgtgacgcaagtttagaatcaacagtgtgttctttcttgtatcgtttgtgatacttgttaggactgtgt 13870249  T
Q  409 gtgagtattga 419  Q
    ||| |||||||    
T  13870250 gtgggtattga 13870260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 9 - 420
Target Start/End: Complemental strand, 19172120 - 19171711
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    ||||||||||||| |||||||||||  |||||||||||||||   || |||||||||||  ||||||||||||| |||||||||| ||||| ||||||||    
T  19172120 cttattgatcaagtaacgcgcatatcttctaagaatcagctgcggaacatttctaaagtagattttatattttaggaaatatttattattggttggaacg 19172021  T
Q  109 atcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaa 208  Q
    ||||||||||||||||||  ||||||||||||  || ||| |||||||||| ||||||| ||||| ||||||||| |||||| ||| | |||||| ||||    
T  19172020 atcctataaatgttccgaatttttaggactttcgag-tttttttctgattcatgttttgtagatt-agctgaaccaatctgctttg-tgctgaagcccaa 19171924  T
Q  209 cgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gt 307  Q
    |  | ||||||||||||||  ||||||||||  ||||||||| |||||||||||||  |||||| | ||||||||||||||||||||||||||||||  |    
T  19171923 ctaagtatttagcccaagccgcttcagtatataaggaagactccaagacctaattgatcattcaagccgtcatactaaaaagtttagatttttagggttt 19171824  T
Q  308 tgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtg 407  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||  | ||||||||||||||||| || | |||||||| ||||||| |||    
T  19171823 tgagtctttatgtattctgctcttgtatcgtttgtgatgtaagtttagaatcttctttgtgttctttcttgtattgtttatgatacttgttaggacagtg 19171724  T
Q  408 tgtgagtattgat 420  Q
    |||||||||||||    
T  19171723 tgtgagtattgat 19171711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 10 - 360
Target Start/End: Complemental strand, 19077847 - 19077499
Alignment:
Q  10 ttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacga 109  Q
    |||||||||||| ||| |||||||  ||||||||||||||||  ||||||||||||||  ||||||||||||| |||||||||| ||||| |||||||||    
T  19077847 ttattgatcaagcaacacgcatatcttctaagaatcagctgtggaatatttctaaagtagattttatattttaggaaatatttattattggttggaacga 19077748  T
Q  110 tcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaac 209  Q
    | ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||| |||||||||||||||| ||| | |||||| |||||    
T  19077747 tactataaatgttccgacattttaggactttccctatttgtttctgattcttgttttgcagatt-agctgaaccgatctgctttg-tgctgaagcccaac 19077650  T
Q  210 gtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gtt 308  Q
      | ||| ||||||||||| ||||||||||  |||||||||||||||||||||||| |||||| | ||| ||||||||||||||||||||||||||  ||    
T  19077649 taagtatctagcccaagctgcttcagtatataaggaagacttcaagacctaattgttcattcaagccgtaatactaaaaagtttagatttttagggtttt 19077550  T
Q  309 gagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatct 360  Q
    ||||||| |||||||||||||||||||| | | | |||||||||||||||||    
T  19077549 gagtctttatgtattctgctcttgtatcatgt-tcatgcaagtttagaatct 19077499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 7 - 345
Target Start/End: Original strand, 19894120 - 19894457
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatcta--agaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttgg 104  Q
    ||||||||||||||| |||||||||||  ||||  ||||  || |||  |||||||||||||||||||||| ||| ||  ||||||||| |||||||| |    
T  19894120 aacttattgatcaagcaacgcgcatatcttctataagaaagagttgtggaatatttctaaagtgtattttacattatagaaaatatttattattgttttg 19894219  T
Q  105 aacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagt 204  Q
    |||||||||||| || |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||     
T  19894220 aacgatcctatacattttccgacattttaggactttccagatttgtttctgattattgttttgcagattaagctgaaccgaactgcatt-ttactgaagc 19894318  T
Q  205 ccaacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagg 304  Q
    |||||| ||| ||||||||||||| ||||||||||  |||||||||||||||||||||||| |||||| |  ||||| || |||||||||||||||||||    
T  19894319 ccaacgaatt-tttagcccaagctgcttcagtatataaggaagacttcaagacctaattgttcattcaagctgtcattct-aaaagtttagatttttagg 19894416  T
Q  305 ggttgagtcttcatgtattctgctcttgtatcgtttgtgat 345  Q
    | |||||||||||||||||| || |||||| ||||||||||    
T  19894417 gtttgagtcttcatgtattcagcccttgtaccgtttgtgat 19894457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 9 - 411
Target Start/End: Original strand, 21722861 - 21723262
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    |||||||| || | |||||  |||| |||||||||||||||||| ||||||||||||||  || |||||||||| |||||||||| |||| |||||||||    
T  21722861 cttattgaccaggcaacgcatatatcatctaagaatcagctgtagaatatttctaaagtagatattatattttaggaaatatttattattatttggaacg 21722960  T
Q  109 atcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaa 208  Q
    ||||||||||||||  ||| ||||||||||||  ||||| || ||||||||||||| |||||||| ||||||||| || ||| |||  ||| ||| ||||    
T  21722961 atcctataaatgttttgactttttaggactttcaagattagtctctgattcttgttatgcagatt-agctgaacctatttgctttg-cactaaagcccaa 21723058  T
Q  209 cgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggtt 308  Q
    || ||||||||||||||||| ||||||||||  | |||||||||||| |||||||||  ||||||| |||||| || |||||||||||||||||||| ||    
T  21723059 cgaattatttagcccaagctgcttcagtatataaagaagacttcaagccctaattgtttattcatgccgtcattct-aaaagtttagatttttagggttt 21723157  T
Q  309 gagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatc--tagtgtgtgttctttcttgtatcgtctgtgatactt-tttaggactg 405  Q
    ||||||||||||||||||| |||||||| ||| ||||||| ||||||||||  || ||||||  ||||||||||||| ||||||||||| ||||||||||    
T  21723158 gagtcttcatgtattctgcacttgtatcatttttgatgcaggtttagaatctttactgtgtg-cctttcttgtatcggctgtgatacttgtttaggactg 21723256  T
Q  406 tgtgtg 411  Q
    | ||||    
T  21723257 tttgtg 21723262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 97 - 411
Target Start/End: Original strand, 8465213 - 8465529
Alignment:
Q  97 ttgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgtt 196  Q
    ||||| |||||||||||| | |||||| |||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| ||| ||| |    
T  8465213 ttgttgggaacgatcctaaagatgttctgacattttaggactttccatatttgtttctgattcttgttttgcagatt-agctgaaccgatatgctttg-t 8465310  T
Q  197 actgaagtccaacgtat-tatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttag 295  Q
    ||||||| |||||  ||  |||||||||||||| ||||||||||  ||| |||||||||||||||||||  |||||| | ||||| ||||||||||||||    
T  8465311 actgaagcccaactaatgaatttagcccaagctgcttcagtatataagggagacttcaagacctaattgatcattcaagccgtcacactaaaaagtttag 8465410  T
Q  296 attttt-aggggttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtg-ttctttcttgtatcgtctgtgatac 393  Q
    |||||| |||  |||||||| |||||  ||| |||||||||||||| |||||||||||||||| |||   |||| |||||||||||||||||||||||||    
T  8465411 atttttaaggttttgagtctacatgtgctctactcttgtatcgtttatgatgcaagtttagaacctatattgtgattctttcttgtatcgtctgtgatac 8465510  T
Q  394 tt-tttaggactgtgtgtg 411  Q
    || ||||||||||||||||    
T  8465511 ttgtttaggactgtgtgtg 8465529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 40 - 414
Target Start/End: Original strand, 12039193 - 12039569
Alignment:
Q  40 agaatcagctgtataatatttctaaagt-gtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggact 138  Q
    ||||||||||||  |||||||||||||| |||||| |||||||| |||||||||  |||||||| | ||||||||| | |||||||||||||||||||||    
T  12039193 agaatcagctgtggaatatttctaaagtagtattt-atattttaggaaatatttgttattgttttggacgatcctaaagatgttccgacattttaggact 12039291  T
Q  139 tttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaacgtat-tatttagcccaagctacttcagta 237  Q
    || || |||||||| |||||||| ||||||| |||| ||||||| ||||||| ||||   |||||   |||  || ||||||| ||||||| ||| ||||    
T  12039292 ttccatatttgtttatgattcttattttgcatatta-gctgaactgatctgctttgtgt-tgaagcataactaatgtatttagtccaagctgctttagta 12039389  T
Q  238 taagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagtcttcatgtattctgctcttgtatc 336  Q
    ||  ||| |||||||||||||||||||  |||| | ||||||||||||||||||||||||||||||||  |||||||| |||||  ||| ||||||||||    
T  12039390 tataagggagacttcaagacctaattggtcattaaagtcgtcatactaaaaagtttagatttttagggttttgagtctacatgtgctctactcttgtatc 12039489  T
Q  337 gtttgtgatgcaagtttagaatctagtgtgtg-ttctttcttgtatcgtctgtgatactt-tttaggactgtgtgtgagt 414  Q
    ||||||||||||||||||||| ||| | |||| | ||||||||||| || |||||||||| |||||||||||||||||||    
T  12039490 gtttgtgatgcaagtttagaacctattttgtgatcctttcttgtattgtttgtgatacttgtttaggactgtgtgtgagt 12039569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 40 - 412
Target Start/End: Original strand, 20465379 - 20465753
Alignment:
Q  40 agaatcagctgtataatatttctaaagt-gtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggact 138  Q
    ||||||||||||  |||||||||||||| |||||| |||||||| |||||||||  ||||| |||||||||||||| | |||||||||||||||||||||    
T  20465379 agaatcagctgtggaatatttctaaagtagtattt-atattttaggaaatatttgttattggttggaacgatcctaaagatgttccgacattttaggact 20465477  T
Q  139 tttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaac-gtattatttagcccaagctacttcagta 237  Q
    || || |||||||| |||||||||||||||||||| |||||||| ||||||| ||| |  ||||| |||||   | ||||||||||||||| || |||||    
T  20465478 ttccatatttgtttatgattcttgttttgcagatt-agctgaactgatctgctttg-tgttgaagcccaactaaagtatttagcccaagctgctacagta 20465575  T
Q  238 taagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagtcttcatgtattctgctcttgtatc 336  Q
    ||  ||| ||||||||||| | |||||  |||||| || |||||||||||||||||||||||||||||  |||||||| |||||  |||  |||| ||||    
T  20465576 tataagggagacttcaagaacaaattgatcattcaagttgtcatactaaaaagtttagatttttagggttttgagtctacatgtgctctattcttttatc 20465675  T
Q  337 gtttgtgatgcaagtttagaatctagtgtgtg-ttctttcttgtatcgtctgtgatactt-tttaggactgtgtgtga 412  Q
     |||||||||||||||||||| |||   ||||   |||||||||||||| |||||||||| |||||||||||||||||    
T  20465676 ttttgtgatgcaagtttagaacctatattgtgaacctttcttgtatcgtttgtgatacttgtttaggactgtgtgtga 20465753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 258 - 433
Target Start/End: Complemental strand, 25965151 - 25964977
Alignment:
Q  258 ctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaa 357  Q
    |||||||| |||||| | ||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25965151 ctaattgttcattcaagccgtcatactaaaaagtt-agatttttagggtttgagtcttcatgtgttctgctcttgtatcgtttgtgatgcaagtttagaa 25965053  T
Q  358 tctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtgtgtgagtattgattactctttgtact 433  Q
    |||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||||||||| |||||||    
T  25965052 tctactgtgtgttctttcttttatcgtctatgatacttgttaggactttgtgtacgtattgattactccttgtact 25964977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 214 - 420
Target Start/End: Complemental strand, 14259418 - 14259208
Alignment:
Q  214 tatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagt 312  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||||||||  |||||| ||||||||| ||||||||||||||||||||||  ||||||    
T  14259418 tatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgatcattcaagtcgtcatattaaaaagtttagatttttagggttttgagt 14259319  T
Q  313 cttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatc--tagtgtgtgttctttc-ttgtatcgtctgtgatactt-tttaggactgtgt 408  Q
    ||| ||||||||| |||||||||| | | ||||||||||||| ||||  || ||||||||||||| || |||| |  ||||||||| |||||||||||||    
T  14259318 ctttatgtattctactcttgtatcatgt-tgatgcaagtttaaaatctttactgtgtgttctttctttttatcattagtgatacttgtttaggactgtgt 14259220  T
Q  409 gtgagtattgat 420  Q
    || |||||||||    
T  14259219 gtaagtattgat 14259208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 40 - 239
Target Start/End: Original strand, 12028628 - 12028825
Alignment:
Q  40 agaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactt 139  Q
    ||||||||||||  ||||||||||||||  ||||||||||||   ||||||||  |||||  |||||||||| |||||||||||||||||||||||||||    
T  12028628 agaatcagctgtggaatatttctaaagtagattttatattttggcaaatatttgttattggctggaacgatcttataaatgttccgacattttaggactt 12028727  T
Q  140 ttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaacgtattatttagcccaagctacttcagtata 239  Q
    |||| |||||||||||| |  ||||||||||||| |||||||||||||||| || ||||| ||| |||||| | ||||||| ||||||| ||||||||||    
T  12028728 ttcatatttgtttctgaattctgttttgcagatt-agctgaaccgatctgc-tttttactaaagcccaacgaagtatttagtccaagctgcttcagtata 12028825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 21705984 - 21706149
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    |||||||| |||| |||||| |||| ||||||||||||| |||  ||||||||||||||  || |||||||||| |||||||||| |||| ||||||| |    
T  21705984 cttattgaccaagcaacgcgtatatcatctaagaatcagttgtggaatatttctaaagtagatattatattttaggaaatatttattattatttggaatg 21706083  T
Q  109 atcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagatta 174  Q
    |||||||||||||||||||||||||||||||| |||||| || |||||||| ||||||| ||||||    
T  21706084 atcctataaatgttccgacattttaggactttccagattagtctctgattcatgttttgtagatta 21706149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 20989244 - 20989458
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    |||||||||| || |||||||||||  |||||||||||| |||  ||||||||||||||  ||||||||||||| |||||||||  ||||| ||||||||    
T  20989244 cttattgatctagcaacgcgcatatcttctaagaatcagttgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacg 20989343  T
Q  109 atcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaa 208  Q
    ||| |||||||||||||| |||||| |||||| || || ||||||| ||||||||||| | |||| |||||||||||||||| ||| | |||||| ||||    
T  20989344 atcttataaatgttccgatattttacgactttccatatctgtttctaattcttgtttttctgatt-agctgaaccgatctgctttg-tgctgaagcccaa 20989441  T
Q  209 cgtattatttagcccaa 225  Q
    |  | ||||||||||||    
T  20989442 ctaagtatttagcccaa 20989458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 20653774 - 20653589
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    ||||||||||||| ||||| |||||  |   ||||||||||||  ||||||||||||||    ||||||||||| |||||||||  |||||||| | |||    
T  20653774 cttattgatcaagcaacgcacatatctttacagaatcagctgtggaatatttctaaagtaatatttatattttaagaaatatttgttattgttttggacg 20653675  T
Q  109 atcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgt 195  Q
    |||||| | ||||||| ||||||||||||||| || ||||||||||||||||||||||||| ||| |||||||| ||||||| ||||    
T  20653674 atcctaaagatgttccaacattttaggactttccatatttgtttctgattcttgttttgcatatt-agctgaactgatctgctttgt 20653589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 72 - 195
Target Start/End: Complemental strand, 25806050 - 25805928
Alignment:
Q  72 tttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcaga 171  Q
    ||||||||||| || ||||||||||||||||   ||||||||| | ||||||||||| ||||||||||| || |||||| |||||||| |||||||||||    
T  25806050 tttatattttaggagatatttaatattgttttagacgatcctaaagatgttccgacactttaggactttccatatttgtctctgattcctgttttgcaga 25805951  T
Q  172 ttaagctgaaccgatctgcattgt 195  Q
    || |||||||||||||||| ||||    
T  25805950 tt-agctgaaccgatctgctttgt 25805928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 17876253 - 17876394
Alignment:
Q  54 aatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttc 153  Q
    ||||||||||||||    ||||||||||| ||||| |||  |||| ||| |  |||||||| | |||||||||||||||||||||||  | ||||||||     
T  17876253 aatatttctaaagtaatatttatattttaggaaatgtttgttatttttttgttcgatcctaaagatgttccgacattttaggactttcgatatttgtttt 17876352  T
Q  154 tgattcttgttttgcagattaagctgaaccgatctgcattgtt 196  Q
    |||||||||||||||||||| |||||||||||||||| |||||    
T  17876353 tgattcttgttttgcagatt-agctgaaccgatctgctttgtt 17876394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 54 - 167
Target Start/End: Original strand, 17863973 - 17864086
Alignment:
Q  54 aatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttc 153  Q
    ||||||||||||||    |||||||||||  ||||||||  |||||||| | |||||||||   ||||||||||||||||||||||| || |||||||||    
T  17863973 aatatttctaaagtaatatttatattttagaaaatatttgttattgttttggacgatcctaatgatgttccgacattttaggactttccatatttgtttc 17864072  T
Q  154 tgattcttgttttg 167  Q
    ||||||||||||||    
T  17864073 tgattcttgttttg 17864086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 355
Target Start/End: Original strand, 23882216 - 23882495
Alignment:
Q  73 ttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagat 172  Q
    |||||||||| ||||||||| |   ||||| | ||| ||||| | ||||||| ||||||||||||||| || |||| | ||||||||||||| |||||||    
T  23882216 ttatattttaggaaatatttgaagctgttttggacgttcctaaagatgttcctacattttaggactttccaaatttttctctgattcttgttatgcagat 23882315  T
Q  173 taagctgaaccgatctgcattgttactgaagtccaacgt-attatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattc 271  Q
    | ||||||| |||| ||| ||||| |||||  ||||| |  ||  ||||||||   | ||||||||||  |||||| ||||||||||||||||  |||||    
T  23882316 t-agctgaa-cgatttgctttgtt-ctgaaacccaacatcgtttattagcccatattgcttcagtatataaggaaggcttcaagacctaattgatcattc 23882412  T
Q  272 atgtcgtcatactaaaaagtttagatttttaggggttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttag 355  Q
    | | ||||||  || ||||||||||||||  ||  |||||||||  ||| |||| |||||||||||| | |||| |||||||||    
T  23882413 aagccgtcattatataaagtttagattttagggttttgagtctttgtgtgttctactcttgtatcgtgt-tgattcaagtttag 23882495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 218 - 410
Target Start/End: Original strand, 17864087 - 17864281
Alignment:
Q  218 tagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagtcttc 316  Q
    ||||||||||| |||||| |||  ||| ||| ||||||| |||||  | |||||| | |||||| ||| ||||||||||||||| |||  |||||||| |    
T  17864087 tagcccaagctgcttcagcatataagggagatttcaagaactaatgattcattcaagccgtcattctataaagtttagatttttggggttttgagtctac 17864186  T
Q  317 atgtattctgctcttgtatcgtttgtgatgcaagtttagaa--tctagtgtgtgttctttcttgtatcgtctgtgatac-tttttaggactgtgtgt 410  Q
    ||||  ||| |||||||||| | | ||||||||||||||||  | || |||| |  ||||||||||||||||||||||| | |||||||||||||||    
T  17864187 atgtgctctactcttgtatcatgt-tgatgcaagtttagaacctttattgtgag-cctttcttgtatcgtctgtgatacatgtttaggactgtgtgt 17864281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 277 - 404
Target Start/End: Original strand, 20989484 - 20989612
Alignment:
Q  277 gtcatactaaaaagtttagatttttaggg-gttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttc 375  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||  |||  |||||||||| ||||||||||||| ||||| ||  |||| |  |||||    
T  20989484 gtcatactaaaaagtttagatttttagggttttgagtctttatgtcctctaatcttgtatcggttgtgatgcaagtctagaaccttttgtgag-cctttc 20989582  T
Q  376 ttgtatcgtctgtgatactt-tttaggact 404  Q
    || ||||||| ||||||||| |||||||||    
T  20989583 ttatatcgtccgtgatacttgtttaggact 20989612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 25970384 - 25970317
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtatttt 74  Q
    ||||||||||  ||| |||||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  25970384 aacttattgactaagcaacgcgcatattttctaagaatcagctgtggaatatttctaaagtgtatttt 25970317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 25974824 - 25974757
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtatttt 74  Q
    ||||||||||  ||| |||||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  25974824 aacttattgactaagcaacgcgcatattttctaagaatcagctgtggaatatttctaaagtgtatttt 25974757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 118 - 355
Target Start/End: Original strand, 29253245 - 29253479
Alignment:
Q  118 atgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaac-gtattat 216  Q
    ||||||| ||||||||||||||| || |||||| |||||||| ||||||||||| | ||||| | |||||||  |||||  ||||| |||||   | |||    
T  29253245 atgttcctacattttaggactttccatatttgtctctgattcctgttttgcaga-tcagctgga-cgatctgttttgtt-ttgaagcccaacaagaatat 29253341  T
Q  217 ttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttgagtcttc 316  Q
    ||  ||| |||| ||||||||||| ||||||||  |||||||||||||  ||| || | | |||| ||||||||||||| ||||  |   ||||||||||    
T  29253342 ttgacccgagctgcttcagtataaaaggaagacaacaagacctaattgatcatccaagccatcattctaaaaagtttagcttttaggattttgagtcttc 29253441  T
Q  317 atgtattctgctcttgtatcgtttgtgatgcaagtttag 355  Q
    |||| ||||  ||||||||| | | ||||||||||||||    
T  29253442 atgtgttctattcttgtatcatgt-tgatgcaagtttag 29253479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 414
Target Start/End: Complemental strand, 25805882 - 25805753
Alignment:
Q  288 aagtttagatttttaggggtt-gagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagt-gtgtgttctttcttgtatcgtc 385  Q
    |||||| ||||||||||| || ||||||| ||||  ||| ||||||||||| |||||||| |||||||||| ||  |  ||||||| |||| |||||||     
T  25805882 aagttttgatttttagggttttgagtctttatgtgctctactcttgtatcggttgtgatgaaagtttagaacctcttactgtgttccttctcgtatcgtt 25805783  T
Q  386 tgtgatactt-tttaggactgtgtgtgagt 414  Q
    |||||||||| ||||||||| |||||||||    
T  25805782 tgtgatacttatttaggactatgtgtgagt 25805753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 28623142 - 28623213
Alignment:
Q  118 atgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgc 190  Q
    ||||||||||||||||||||||| ||  ||||||| |||||  ||||||||||||| ||||||||||||||||    
T  28623142 atgttccgacattttaggactttccatctttgtttatgatttctgttttgcagatt-agctgaaccgatctgc 28623213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 15930366 - 15930465
Alignment:
Q  73 ttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagat 172  Q
    |||||||||||||||||||| |   | ||| | ||| ||||| | ||||||| |||||||||||||||  | |||||| |||||||| ||||||||||||    
T  15930366 ttatattttacgaaatatttgaagctattttggacgttcctaaagatgttcctacattttaggactttctatatttgtctctgattcgtgttttgcagat 15930465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 433
Target Start/End: Original strand, 19894441 - 19894499
Alignment:
Q  375 cttgtatcgtctgtgatactttttaggactgtgtgtgagtattgattactctttgtact 433  Q
    |||||| ||| |||||||| | |||||||||| ||| ||||||||||||||||||||||    
T  19894441 cttgtaccgtttgtgatacatgttaggactgtttgtcagtattgattactctttgtact 19894499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 264
Target Start/End: Original strand, 17869589 - 17869623
Alignment:
Q  230 cttcagtataagaggaagacttcaagacctaattg 264  Q
    ||||||||||| |||||||||||||||||||||||    
T  17869589 cttcagtataaaaggaagacttcaagacctaattg 17869623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 264
Target Start/End: Original strand, 17879341 - 17879375
Alignment:
Q  230 cttcagtataagaggaagacttcaagacctaattg 264  Q
    ||||||||||| |||||||||||||||||||||||    
T  17879341 cttcagtataaaaggaagacttcaagacctaattg 17879375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 15930521 - 15930582
Alignment:
Q  230 cttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagt 291  Q
    ||||||||||| | |||||||||||||||||||||   ||||| | |||||| |||||||||    
T  15930521 cttcagtataaaacgaagacttcaagacctaattgagaattcaagccgtcattctaaaaagt 15930582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 290; Significance: 1e-162; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 7 - 433
Target Start/End: Complemental strand, 645840 - 645416
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    |||||||||||||||  |||||||||| |||||||||||||  |   ||||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  645840 aacttattgatcaagctacgcgcatatcatctaagaatcagtgg---aatatttctaaagtgtattttatattttaggaaatatcgaatattgtttggaa 645744  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    ||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||    
T  645743 cgatcatataaatgttccgacattttaggactttccagatttatttctgattcttgttttgcaaattaagctgaaccggtctgcattgttactgaagccc 645644  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    |||||||||||||||||||||| ||||||||||  | |||||||||||||||||||| |  ||||| | ||||||||||||||||||||||||||||||     
T  645643 aacgtattatttagcccaagctgcttcagtatataaagaagacttcaagacctaattctttattcaagccgtcatactaaaaagtttagatttttagggt 645544  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactg- 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| |||||||||     
T  645543 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtatgtgttctttcttgtatcgcatgtgatacttgttaggactgt 645444  T
Q  406 tgtgtgagtattgattactctttgtact 433  Q
    | ||||||||||||||||||||||||||    
T  645443 tttgtgagtattgattactctttgtact 645416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 7 - 433
Target Start/End: Original strand, 11520864 - 11521288
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| ||||| |||||  |||||||||| | |||  |||||||||||| ||| |||||||||||| |||||||||| ||||||||||||    
T  11520864 aacttattgatcaagcaacgcccatatcttctaagaatcggttgtggaatatttctaaattgtgttttatattttaggaaatatttattattgtttggaa 11520963  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  11520964 cgatcctataaatgtttcgacattttaggactttccagatttgtttctgattcttgttttgcagatcaagctgaaccgatctgcattgttactgaagccc 11521063  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    |||| ||||||||||||||||| ||||||||||  |||||||||||||||||||||||   ||||| | |||||| ||||||   ||| ||||||||||     
T  11521064 aacgaattatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgattattcaagccgtcattctaaaa--gttatatttttagggt 11521161  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgt 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  11521162 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctattgtgtgttctttcttgtatcgtctgtgatacttcttaggactgt 11521261  T
Q  407 gtgtgagtattgattactctttgtact 433  Q
     |||||||||| |||||||||||||||    
T  11521262 ttgtgagtattaattactctttgtact 11521288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 74 - 431
Target Start/End: Complemental strand, 11589105 - 11588748
Alignment:
Q  74 tatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagatt 173  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  11589105 tatattttagcaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactttccagatttgtttctaattcttgttttgcagatt 11589006  T
Q  174 aagctgaaccgatctgcattgttactgaagtccaacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcat 273  Q
    ||||||||||||||||| |||||||||||| |||||| ||||||||| ||||||| ||||||||||  |||||||||||||||||||||||| ||||||     
T  11589005 aagctgaaccgatctgctttgttactgaagcccaacgaattatttagaccaagctgcttcagtatataaggaagacttcaagacctaattgttcattcaa 11588906  T
Q  274 gtcgtcatactaaaaagtttagatttttaggggttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctt 373  Q
    | |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11588905 gccgtcttactaaaaagtttagatttttagggtttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctactgtgtgttctt 11588806  T
Q  374 tcttgtatcgtctgtgatactttttaggactgtgtgtgagtattgattactctttgta 431  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  11588805 tcttgtatcgtttgtgatacttgttaggactgtgtgtgagtattgattactctttgta 11588748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 7 - 433
Target Start/End: Complemental strand, 14165872 - 14165447
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| ||| ||||||| |||||||||||||| ||  ||||||||||||||  || |||||||||| |||||||||| | ||||||||||    
T  14165872 aacttattgatcaagcaacacgcatatcatctaagaatcagcggtggaatatttctaaagtagatattatattttaggaaatatttatttttgtttggaa 14165773  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    || |||||||||| |||||||||||||||||||| |||  ||||||||||||||||||||||||||| |||||||||||||||||||| |  ||||| ||    
T  14165772 cgctcctataaattttccgacattttaggactttccagcattgtttctgattcttgttttgcagatt-agctgaaccgatctgcattg-tgttgaagccc 14165675  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    |||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||| |||||| | |||||| || ||||||||||||||||||||     
T  14165674 aacgaattatttagcccaagttgcttcagtataaaaggaagacttcaagacctaattgttcattcaagccgtcattct-aaaagtttagatttttagggt 14165576  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatc--tagtgtgtgttctttcttgtatcgtctgtgatactt-tttagga- 402  Q
    |||||||||| |||||| |||||||||||| | | ||||||||||||||||||  || ||||||  ||| ||||||||| ||||||||||| |||||||     
T  14165575 ttgagtcttcgtgtattatgctcttgtatcatgt-tgatgcaagtttagaatctttaatgtgtg-ccttacttgtatcgcctgtgatacttgtttaggat 14165478  T
Q  403 -ctgtgtgtgagtattgattactctttgtact 433  Q
      |||||||||||||||| |||||||||||||    
T  14165477 tgtgtgtgtgagtattga-tactctttgtact 14165447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 70 - 411
Target Start/End: Complemental strand, 11999525 - 11999186
Alignment:
Q  70 attttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgca 169  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||  ||||||||  ||||||||||||||    
T  11999525 attttatattttaggaaatatttattattggttggaacgatcctataaatgttctgacattttaggacttttcatttttgtttcatattcttgttttgca 11999426  T
Q  170 gattaagctgaaccgatctgcattgttactgaagtccaacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccat 269  Q
    ||||| || |||||||||||| ||||  |||||| |||||  | ||||||||||||||| ||||||||||  ||||||||||||| ||||||||||  ||    
T  11999425 gatta-gccgaaccgatctgctttgtg-ctgaagcccaactaagtatttagcccaagctgcttcagtatataaggaagacttcaaaacctaattgtt-at 11999329  T
Q  270 tcatgtcgtcatactaaaaagtttagatttttaggggttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgt 369  Q
    ||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  11999328 tcaagtcgtcattctaaaaagtttagatttttagggtttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctactatgtgt 11999229  T
Q  370 tctttcttgtatcgtctgtgatactt-tttaggactgtgtgtg 411  Q
    ||| |||||||||||||||||||||| ||||| ||||| ||||    
T  11999228 tctctcttgtatcgtctgtgatacttgtttagaactgtttgtg 11999186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 39 - 414
Target Start/End: Original strand, 16207365 - 16207739
Alignment:
Q  39 aagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggact 138  Q
    ||||||||| |||  |||||||||||||| |||||||||||||| |||||||||  ||||| |||||||||||||||||||||||||| || ||||||||    
T  16207365 aagaatcagttgtcgaatatttctaaagtatattttatattttaggaaatattttttattggttggaacgatcctataaatgttccgatatgttaggact 16207464  T
Q  139 tttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaacgtattatttagcccaagctacttcagtat 238  Q
    || || |||||||||| |||||||||||||||||| || ||  ||||||||| ||| | |||||| ||| |  | |||||||||||||   |||||||||    
T  16207465 ttccatatttgtttctaattcttgttttgcagatt-agttgtgccgatctgctttg-tgctgaagcccacctaagtatttagcccaagaagcttcagtat 16207562  T
Q  239 aagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagtcttcatgtattctgctcttgtatcg 337  Q
    |  ||||||||||||||||||||||||  ||||| | | ||||||||||||||||||||||||||||  ||||||||| ||||  |||  ||||||||||    
T  16207563 ataaggaagacttcaagacctaattgtttattcaagccatcatactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttgtatcg 16207662  T
Q  338 tttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactt-tttaggactgtgtgtgagt 414  Q
    ||||||||| |||||||||| ||  |||| |  |||||||||||||||||||||| || ||||||| |||||||||||    
T  16207663 tttgtgatgtaagtttagaaccttttgtgag-cctttcttgtatcgtctgtgatatttgtttaggattgtgtgtgagt 16207739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 9 - 414
Target Start/End: Complemental strand, 20992248 - 20991841
Alignment:
Q  9 cttattgatcaagaaacgcgcatat-tatctaagaatcagctgtataatatttctaaagt-gtattttatattttacgaaatatttaatattgtttggaa 106  Q
    |||||||| |||| ||||||||||| |||  || ||||| ||||  |||||||||||||| |||||| |||||||| |||||||||  |||||  |||||    
T  20992248 cttattgaccaagcaacgcgcatatctatacaa-aatcaactgttgaatatttctaaagtagtattt-atattttaggaaatatttgttattgggtggaa 20992151  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    |||||||| | ||||||||||||||||||||||| || |||||||| |||||||||||||||||||| |||||||||||||||| ||| | |||||| ||    
T  20992150 cgatcctaaagatgttccgacattttaggactttccatatttgtttatgattcttgttttgcagatt-agctgaaccgatctgctttg-tgctgaagccc 20992053  T
Q  207 aacgtat-tatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg 305  Q
     ||  || |||||| |||||| | ||||||||||  ||| |||||||||||||||||||  ||||||   ||||||||||||||||||||||||||||||    
T  20992052 gactaatgtatttatcccaagttgcttcagtatataagggagacttcaagacctaattgatcattcaatccgtcatactaaaaagtttagatttttaggg 20991953  T
Q  306 -gttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtg-ttctttcttgtatcgtctgtgatactt-tttagga 402  Q
      |||||||| |||||  ||| |||||||||| ||||||||||||||||||||  ||   |||| | |||||||||||| | |||||||||| |||||||    
T  20991952 ttttgagtctacatgtgctctactcttgtatcatttgtgatgcaagtttagaacatatattgtgatcctttcttgtatcatttgtgatacttgtttagga 20991853  T
Q  403 ctgtgtgtgagt 414  Q
    ||||||||||||    
T  20991852 ctgtgtgtgagt 20991841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 40 - 360
Target Start/End: Complemental strand, 4459413 - 4459095
Alignment:
Q  40 agaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactt 139  Q
    ||||||||||||  ||||||||||||||  ||||||||||||  |||||||||  ||||| |||||||||||||||||||||| ||||||||||||| ||    
T  4459413 agaatcagctgtggaatatttctaaagtagattttatatttttggaaatatttgttattggttggaacgatcctataaatgtttcgacattttaggattt 4459314  T
Q  140 ttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaacgtattatttagcccaagctacttcagtata 239  Q
    | || | ||||||||||||  ||||||||||||| |||||||||||||||| ||||| |||||| | ||   | ||||||||||||||| ||| ||||||    
T  4459313 tccataattgtttctgatttctgttttgcagatt-agctgaaccgatctgctttgtt-ctgaagcctaaataagtatttagcccaagctgctttagtata 4459216  T
Q  240 agaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagtcttcatgtattctgctcttgtatcgt 338  Q
      |  ||||||||||||||||||||  |||||| | ||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| |    
T  4459215 taaacaagacttcaagacctaattgctcattcaagccgtcatactaaaaagtttagatttttagggttttgagtctacatgtattctgctcttgtatcat 4459116  T
Q  339 ttgtgatgcaagtttagaatct 360  Q
     | ||||| |||||||||||||    
T  4459115 gt-tgatgaaagtttagaatct 4459095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 9 - 410
Target Start/End: Original strand, 29545595 - 29545993
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagt-gtattttatattttacgaaatatttaatattgtttggaac 107  Q
    ||||||||||||| |||| ||||||  |   |||||||| |||  |||||| ||||||| |||||| |||||||| |||||||||  |||||||| | ||    
T  29545595 cttattgatcaagcaacgtgcatatctttacagaatcagttgtggaatattcctaaagtagtattt-atattttaggaaatatttgttattgttttggac 29545693  T
Q  108 gatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcca 207  Q
    ||||||| | ||||||||||||||||||||||| || ||||||||||||||  ||||||||||||| |||||||||||||||| ||||| || ||| |||    
T  29545694 gatcctaaagatgttccgacattttaggactttccatatttgtttctgatttctgttttgcagatt-agctgaaccgatctgctttgtt-ctaaagccca 29545791  T
Q  208 ac-gtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttag-gg 305  Q
    ||   ||||||| ||||||||| ||||||||||  ||| ||||||||| |||||||||  |||      |||||| ||||||||||||||||||||| |     
T  29545792 actaaattatttggcccaagctgcttcagtatataagggagacttcaaaacctaattgatcat-----ccgtcattctaaaaagtttagatttttagagt 29545886  T
Q  306 gttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaa--tctagtgtgtgttctttcttgtatcgtctgtgatac-tttttagga 402  Q
     |||||||| |||||  ||| ||||||||| | |||||||||||||||||||  | || |||| |  |||||||||||||| |||||||| | |||||||    
T  29545887 tttgagtctacatgtgctctactcttgtattgattgtgatgcaagtttagaacctttattgtgag-cctttcttgtatcgtttgtgatacatgtttagga 29545985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 9 - 395
Target Start/End: Complemental strand, 12326517 - 12326133
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaa-gaatcagctgtataatatttctaaagt-gtattttatattttacgaaatatttaatattgtttggaa 106  Q
    |||||||| ||||||||||||||||  | ||  |||| ||||||  |||||||||||||| |||||| ||||||||  ||||||||  ||||  ||||||    
T  12326517 cttattgaccaagaaacgcgcatatc-tataccgaattagctgtggaatatttctaaagtagtattt-atattttagaaaatatttgttatttgttggaa 12326420  T
Q  107 -cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtc 205  Q
     |||||||| | ||||||||||||||||||||||| || |||||||||| |||||||||||| |||||| ||||||||||||||| ||||  || ||  |    
T  12326419 acgatcctaaagatgttccgacattttaggactttccatatttgtttctaattcttgttttgaagatta-gctgaaccgatctgctttgtg-ctaaatcc 12326322  T
Q  206 caacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattg-tccattcatgtcgtcatactaaaaagtttagatttttagg 304  Q
    ||||  | ||||||||||||| | ||||||||||  ||| |||||| |||||||||||| | |||||| || ||||||||||||||||||| ||||||||    
T  12326321 caactaaatatttagcccaagatgcttcagtatataagggagactttaagacctaattgattcattcaagttgtcatactaaaaagtttaggtttttagg 12326222  T
Q  305 ggtt-gagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactt 395  Q
    | || |||||| |||||  |||  |||||||||||||||||||||||| ||||| |||   ||||||| ||||||||| || | ||||||||    
T  12326221 gttttgagtct-catgtgctctattcttgtatcgtttgtgatgcaagtctagaaccta--ttgtgttccttcttgtatagtttttgatactt 12326133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 15438781 - 15438617
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    |||||||| |||| || ||||||||  |  |||||||| || |  |||||||||||||| |||||||||||||| |||||||||  ||||| ||| ||||    
T  15438781 cttattgaccaagcaatgcgcatatctttgaagaatcaactttggaatatttctaaagtatattttatattttaggaaatatttgttattggttg-aacg 15438683  T
Q  109 atcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagatta 174  Q
    |||||||||||||| |||||||||| || ||| || ||||||||||||||||||||||||||||||    
T  15438682 atcctataaatgtttcgacattttaagagtttccatatttgtttctgattcttgttttgcagatta 15438617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 214 - 410
Target Start/End: Complemental strand, 15506767 - 15506571
Alignment:
Q  214 tatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagt 312  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||||||||   ||||| | ||||||||   |||||||||||||||||||  ||||||    
T  15506767 tatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgcttattcaagccgtcatac---aaagtttagatttttagggttttgagt 15506671  T
Q  313 cttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaa--tctagtgtgtgttctttcttgtatcgtctgtgatac-tttttaggactgtgtg 409  Q
    || |||||  |    |||||||||||||||||||||||| |||||  | || |||| | ||||||||||||||| |||||||| | ||||||||||||||    
T  15506670 ctacatgtgcttcattcttgtatcgtttgtgatgcaagtctagaacctttattgtgag-tctttcttgtatcgtttgtgatacatgtttaggactgtgtg 15506572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 15506935 - 15506828
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    |||||||| ||||||| ||||||||  |  ||||||||| |||  |||||||||||||| |||||||||||||| |||||||||  ||||| ||||||||    
T  15506935 cttattgaccaagaaatgcgcatatctttgaagaatcagttgtggaatatttctaaagtatattttatattttaggaaatatttgttattggttggaacg 15506836  T
Q  109 atcctata 116  Q
    ||||||||    
T  15506835 atcctata 15506828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 214 - 357
Target Start/End: Complemental strand, 15438599 - 15438455
Alignment:
Q  214 tatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagg-ggttgagt 312  Q
    ||||||||| ||||| ||| ||||||  |||||||||||||||||||||     |||||   |||||||||||||||||||||||||||||   ||||||    
T  15438599 tatttagcctaagctgctttagtatataaggaagacttcaagacctaataaattattcaacccgtcatactaaaaagtttagatttttaggattttgagt 15438500  T
Q  313 cttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaa 357  Q
    || |||||  ||   |||||||||||||||| ||||||| |||||    
T  15438499 ctacatgtgctccattcttgtatcgtttgtgttgcaagtctagaa 15438455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 355
Target Start/End: Complemental strand, 10280296 - 10280172
Alignment:
Q  230 cttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttgagtcttcatgtattctgctc 329  Q
    ||||||||||| |||||||| ||||||||||||   | ||||| | ||| || ||||||||||||| ||||  | | |||||||||||||| ||||  ||    
T  10280296 cttcagtataaaaggaagacatcaagacctaatgtactattcaagccgttattctaaaaagtttagcttttacgagtttgagtcttcatgtgttctattc 10280197  T
Q  330 ttgtatcgtttgtgatgcaagtttag 355  Q
    ||||||| | | ||||||||||||||    
T  10280196 ttgtatcatgt-tgatgcaagtttag 10280172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 355
Target Start/End: Complemental strand, 14927244 - 14927009
Alignment:
Q  118 atgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaac-gtattat 216  Q
    ||||||| ||||||||||||||| || |||||| |||||||| ||||||||||| | ||||| | |||||||  ||||| |||||| |||||   |  ||    
T  14927244 atgttcctacattttaggactttccatatttgtctctgattcctgttttgcaga-tcagctgga-cgatctgttttgtt-ctgaagcccaacaagaccat 14927148  T
Q  217 ttagcccaagctacttcagtataagaggaagacttcaagacctaattgt-ccattcatgtcgtcatactaaaaagtttagatttttaggggttgagtctt 315  Q
    || |||||   | ||||||||||| |||||||||||||||||||||| |   ||||||||  |||| || |||||||||| ||||  ||  ||||||| |    
T  14927147 ttggcccatattgcttcagtataaaaggaagacttcaagacctaattatattattcatgttttcattctgaaaagtttagtttttatggttttgagtcat 14927048  T
Q  316 catgtattctgctcttgtatcgtttgtgatgcaagtttag 355  Q
      ||| ||||  ||||||||||| | ||||||||||||||    
T  14927047 tgtgtgttctattcttgtatcgtgt-tgatgcaagtttag 14927009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 355
Target Start/End: Complemental strand, 15350710 - 15350475
Alignment:
Q  118 atgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaac-gtattat 216  Q
    ||||||| ||||||||||||||| || |||||| |||||||| ||||||||||| | ||||| | |||||||  ||||| |||||| |||||   |  ||    
T  15350710 atgttcctacattttaggactttccatatttgtctctgattcctgttttgcaga-tcagctgga-cgatctgttttgtt-ctgaagcccaacaagaccat 15350614  T
Q  217 ttagcccaagctacttcagtataagaggaagacttcaagacctaattgt-ccattcatgtcgtcatactaaaaagtttagatttttaggggttgagtctt 315  Q
    || |||||   | ||||||||||| |||||||||||||||||||||| |   ||||||||  |||| || |||||||||| ||||  ||  ||||||| |    
T  15350613 ttggcccatattgcttcagtataaaaggaagacttcaagacctaattatattattcatgttttcattctgaaaagtttagtttttatggttttgagtcat 15350514  T
Q  316 catgtattctgctcttgtatcgtttgtgatgcaagtttag 355  Q
      ||| ||||  ||||||||||| | ||||||||||||||    
T  15350513 tgtgtgttctattcttgtatcgtgt-tgatgcaagtttag 15350475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 16437416 - 16437317
Alignment:
Q  73 ttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagat 172  Q
    |||||||||| ||||||||| |  |||||| | ||| ||||| | ||||||| | ||||||||||||| || |||||| | |||||| ||||||| ||||    
T  16437416 ttatattttaggaaatatttgaagttgttttggacgttcctaaagatgttcctatattttaggactttccatatttgtctttgattcctgttttgtagat 16437317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 21260917 - 21260866
Alignment:
Q  230 cttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcat 281  Q
    ||||||||||  |||||||||||||||||||||| | |||||| ||||||||    
T  21260917 cttcagtatataaggaagacttcaagacctaattattcattcaagtcgtcat 21260866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 6045821 - 6045771
Alignment:
Q  213 ttatttagcccaagctacttcagtataagaggaagacttcaagacctaatt 263  Q
    ||||||||||||   | ||||||||||| ||||||||||||||||||||||    
T  6045821 ttatttagcccatatttcttcagtataaaaggaagacttcaagacctaatt 6045771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 355
Target Start/End: Complemental strand, 16437261 - 16437136
Alignment:
Q  230 cttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaag-tttagatttttaggggttgagtcttcatgtattctgct 328  Q
    ||||||||||| |||||||| ||||||||||||||   ||||| | | |||| |||||||| ||||| ||||  ||  || ||||||||||| ||||  |    
T  16437261 cttcagtataaaaggaagacatcaagacctaattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctatt 16437162  T
Q  329 cttgtatcgtttgtgatgcaagtttag 355  Q
    |||||||| | | ||||||||||||||    
T  16437161 cttgtatcatgt-tgatgcaagtttag 16437136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 7 - 433
Target Start/End: Original strand, 109711 - 110136
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| ||||||||||| ||||||||||||  |||  ||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  109711 aacttattgatcaagcaacgcgcatatcatctaagaatcaattgtggaatatttctaaagtgtattttatattttaggaaatatttaattttgtttggaa 109810  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||    
T  109811 cgatcctataaatgttctaacattttaggactttccagatttgtttctgattcttgttttgcagattaagctgaaccaatatgcattgttactgaagccc 109910  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    |||| ||||||||||||||||| ||||||||||  |||||||||||||||||||||||| ||||||   |||||| || ||||||||||||| ||||||     
T  109911 aacgaattatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgttcattcaaaccgtcattct-aaaagtttagattattagggt 110009  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatcta-gtgtgtgttctttcttgtatcgtctgtgatactttttaggactg 405  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||||||||||||  ||||||||| |||||||| |||||||||||||| |||| ||||    
T  110010 ttgagtcttcatgtattctgtttttgtatcgtttgtgatgaaagtttagaatctatttgtgtgttc-ttcttgtaacgtctgtgatacttgttagaactg 110108  T
Q  406 tgtgtgagtattgattactctttgtact 433  Q
    ||||||||||||||||||||||||||||    
T  110109 tgtgtgagtattgattactctttgtact 110136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 7 - 433
Target Start/End: Original strand, 1820 - 2244
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||  |||||||||||  ||||||||||||||||  ||||||| ||||||||||||||||||||  |||||||||| ||||||||||||    
T  1820 aacttattgatcaaccaacgcgcatatcttctaagaatcagctgtggaatatttataaagtgtattttatatttttggaaatatttattattgtttggaa 1919  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||| ||| | |||||| ||    
T  1920 cgatcctataaatgttccgacattttaggactttctagatttgtttctgattcttgttttgcagattaagctgaaccgatatgctttg-tgctgaagccc 2018  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttagggg 306  Q
    |||  |||||||||||||| || ||||||||||  |||||||||||||||||||||||   ||||| | |||||| || ||||||||||||||| | ||     
T  2019 aacaaattatttagcccaaactgcttcagtatataaggaagacttcaagacctaattgattattcaagccgtcattct-aaaagtttagattttcaaggt 2117  T
Q  307 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgt 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||    
T  2118 ttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctactgtgtgttctttcttgtatcgtctgggatacttgttaggactgt 2217  T
Q  407 gtgtgagtattgattactctttgtact 433  Q
    |||||||||||||||||||||||||||    
T  2218 gtgtgagtattgattactctttgtact 2244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 218; Significance: 1e-119; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 9 - 433
Target Start/End: Complemental strand, 37295 - 36874
Alignment:
Q  9 cttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacg 108  Q
    ||||||||||||| ||| |||||||  ||||||||||||||||  ||||||||||||    || |||  ||||| |||||||||| ||||||||||||||    
T  37295 cttattgatcaagcaacacgcatatcttctaagaatcagctgtggaatatttctaaaaatgatattagtttttaggaaatatttattattgtttggaacg 37196  T
Q  109 atcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaa 208  Q
    |||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||| || ||||||||||| ||| ||||  |||| | ||||    
T  37195 atcctataaatgttccgacattttaggactgtccagatttgtttatgattcttgttttgcagacta-gctgaaccgatttgctttgtg-ctgaggcccaa 37098  T
Q  209 cgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggtt 308  Q
    || ||||||||||||| ||||||| ||| ||  |||||||||||||||||||||||| |||||| |  ||||| |||||| |||||||||||||||| ||    
T  37097 cgaattatttagcccatgctactttagtctagaaggaagacttcaagacctaattgttcattcaagctgtcattctaaaa-gtttagatttttagggttt 36999  T
Q  309 gagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtgt 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||| || |||||| |||||    
T  36998 gagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatctattatgtgttatttcttgtatcgtctgtgatatttgttaggattgtgt 36899  T
Q  409 gtgagtattgattact-ctttgtact 433  Q
    ||||||| |||||||| |||||||||    
T  36898 gtgagta-tgattactcctttgtact 36874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 182; Significance: 3e-98; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 7 - 264
Target Start/End: Original strand, 47844 - 48101
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| | |||||||||  ||||||||||||||    |||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  47844 aacttattgatcaagcagcgcgcatatcttctaagaatcagctaaggaatatttctaaaatgtattttatattttaggaaatatttaatattgtttggaa 47943  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtcc 206  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||| |||| ||||||||||| ||    
T  47944 cgatcctataaatgttccgacattttaggactttccagatttgtttttgattcttgttttgcatattaagctgaaccgatttgcactgttactgaagccc 48043  T
Q  207 aacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattg 264  Q
    |||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||    
T  48044 aacgtattatttagcccaagctgcttcagtatataaggaagacttcaagacctaattg 48101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 336 - 433
Target Start/End: Original strand, 48125 - 48222
Alignment:
Q  336 cgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtgtgtgagtattgattact-ctttgtact 433  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||    
T  48125 cgtttgtgatgcaagtttagaatctaatgtgtgttctt-cttgtatcgtctatgatacttgttaggactgtgtgtgagtattgattactcctttgtact 48222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 141; Significance: 9e-74; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 230 - 430
Target Start/End: Original strand, 12185 - 12384
Alignment:
Q  230 cttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttgagtcttcatgtattctgctc 329  Q
    ||||||||||  |||||||||||||||||||||||  |||||| |||||||  |||||| |||||||||||||||| |||||||||||||||||||||||    
T  12185 cttcagtatataaggaagacttcaagacctaattgctcattcaagtcgtcactctaaaa-gtttagatttttagggtttgagtcttcatgtattctgctc 12283  T
Q  330 ttgtatcgtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactttttaggactgtgtgtgagtattgattactctttg 429  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || | ||||||||||||||||||||||||||||    
T  12284 ttgtatcgtttgtgatgcaagtttagaatctactgtgtgttctttcttgtatcgcctgtgatacttgttcgaactgtgtgtgagtattgattactctttg 12383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 136; Significance: 8e-71; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 40 - 410
Target Start/End: Original strand, 17610 - 17982
Alignment:
Q  40 agaatcagctgtataatatttctaaagt-gtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggact 138  Q
    |||||||||| |  |||||||||||||| |||||| |||||||| |||||||||  ||||| |||||| ||||||| | ||||||| |||||||||||||    
T  17610 agaatcagctatggaatatttctaaagtagtattt-atattttaggaaatattttttattggttggaatgatcctaaagatgttccaacattttaggact 17708  T
Q  139 tttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaac-gtattatttagcccaagctacttcagta 237  Q
    ||||| |||||||| |||||||||||||||||| | |||||||||||||||| ||| ||| |||| |||||   | ||||||||||||||| ||||||||    
T  17709 tttcatatttgtttatgattcttgttttgcagaat-agctgaaccgatctgctttg-taccgaagcccaactaaactatttagcccaagctgcttcagta 17806  T
Q  238 taagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagtcttcatgtattctgctcttgtatc 336  Q
    ||  ||| ||||||||||||| || ||  |||||| |||||||| |||||||||||||| ||||||||  |||||||| |||||  ||| ||||||||||    
T  17807 tataagggagacttcaagaccaaagtgatcattcaagtcgtcattctaaaaagtttagacttttagggttttgagtctacatgtgctctactcttgtatc 17906  T
Q  337 gtttgtgatgcaagtttagaatctagtgtgtg-ttctttcttgtatcgtctgtgatac-tttttaggactgtgtgt 410  Q
    ||||||||||||||||||||| |||   ||||   ||||||||||||||| ||||||| | |||||||||||||||    
T  17907 gtttgtgatgcaagtttagaacctatattgtgagcctttcttgtatcgtccgtgatacatgtttaggactgtgtgt 17982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 40 - 410
Target Start/End: Original strand, 27004 - 27376
Alignment:
Q  40 agaatcagctgtataatatttctaaagt-gtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggact 138  Q
    |||||||||| |  |||||||||||||| |||||| |||||||| |||||||||  ||||| |||||| ||||||| | ||||||| |||||||||||||    
T  27004 agaatcagctatggaatatttctaaagtagtattt-atattttaggaaatattttttattggttggaatgatcctaaagatgttccaacattttaggact 27102  T
Q  139 tttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaac-gtattatttagcccaagctacttcagta 237  Q
    ||||| |||||||| |||||||||||||||||| | |||||||||||||||| ||| ||| |||| |||||   | ||||||||||||||| ||||||||    
T  27103 tttcatatttgtttatgattcttgttttgcagaat-agctgaaccgatctgctttg-taccgaagcccaactaaactatttagcccaagctgcttcagta 27200  T
Q  238 taagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagtcttcatgtattctgctcttgtatc 336  Q
    ||  ||| ||||||||||||| || ||  |||||| |||||||| |||||||||||||| ||||||||  |||||||| |||||  ||| ||||||||||    
T  27201 tataagggagacttcaagaccaaagtgatcattcaagtcgtcattctaaaaagtttagacttttagggttttgagtctacatgtgctctactcttgtatc 27300  T
Q  337 gtttgtgatgcaagtttagaatctagtgtgtg-ttctttcttgtatcgtctgtgatac-tttttaggactgtgtgt 410  Q
    ||||||||||||||||||||| |||   ||||   ||||||||||||||| ||||||| | |||||||||||||||    
T  27301 gtttgtgatgcaagtttagaacctatattgtgagcctttcttgtatcgtccgtgatacatgtttaggactgtgtgt 27376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 54 - 410
Target Start/End: Original strand, 7037 - 7395
Alignment:
Q  54 aatatttctaaagt-gtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgttt 152  Q
    |||||||||||||| |||||| |||||||| |||||||||  ||||| |||||||||||||| | ||||||| ||||||||||||||| || ||||||||    
T  7037 aatatttctaaagtagtattt-atattttaggaaatatttgttattggttggaacgatcctaaagatgttccaacattttaggactttccatatttgttt 7135  T
Q  153 ctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaacgtat-tatttagcccaagctacttcagtataagaggaagactt 251  Q
    ||| |||||||||| ||||||| || |||||||||| | |||| ||||||| ||||   |  |||||||||| |||| ||||||||||  ||| ||||||    
T  7136 ctggttcttgtttttcagatta-gccgaaccgatctactttgt-actgaagcccaaataaagtatttagcccgagctgcttcagtatataagggagactt 7233  T
Q  252 caagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaag 350  Q
    |||||||||||||  |||||| | || ||| |||| ||||||||||||||||||  |||||||| |||||  ||| ||||||||||||||||||||||||    
T  7234 caagacctaattgatcattcaagccgccattctaataagtttagatttttagggttttgagtctacatgtgctctactcttgtatcgtttgtgatgcaag 7333  T
Q  351 tttagaatctagtgtgtg-ttctttcttgtatcgtctgtgatac-tttttaggactgtgtgt 410  Q
    ||||||| |||   ||||   ||||||||||||||||||||||| | |||||||||||||||    
T  7334 tttagaacctatattgtgagcctttcttgtatcgtctgtgatacatgtttaggactgtgtgt 7395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 136; Significance: 8e-71; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 98 - 433
Target Start/End: Original strand, 356838 - 357178
Alignment:
Q  98 tgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgtta 197  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  356838 tgtttggaacgatcctataaatgttccgacattttaggattttccagatttgtttctgattcttgttttgaagattaagctgaaccgatctgcattgtta 356937  T
Q  198 ctgaagtccaacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagat 297  Q
    |||||| ||| |  ||||||||||||||||| ||| ||||||  ||||||||||||| |||||||||   ||||| | |||||| ||||||   ||||||    
T  356938 ctgaagcccatcaaattatttagcccaagctgctttagtatataaggaagacttcaaaacctaattgattattcaagccgtcattctaaaa--gttagat 357035  T
Q  298 ttttaggggttgagtcttcatgtattct----gctcttgt----atc--gtttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctg 387  Q
    |||||||| ||| ||||||||||||| |       |||||    |||   | ||||||||||||||||||||||   ||||||| |||||||||||| ||    
T  357036 ttttagggtttgggtcttcatgtatttttagaatacttgttaggatctactgtgtgatgcaagtttagaatcta--ctgtgttc-ttcttgtatcgtttg 357132  T
Q  388 tgatactttttaggactgtgtgtgagtattgattact-ctttgtact 433  Q
    |||||||| |||||||||||||||||| ||||||||| |||||||||    
T  357133 tgatacttgttaggactgtgtgtgagt-ttgattactcctttgtact 357178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 135; Significance: 3e-70; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 2597 - 2411
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||  ||||||||||||||||||| ||||||||| |||||||||| ||||||||||||    
T  2597 aacttattgatcaagcaacgcgcatatcttctaagaatcagctgtggaatatttctaaagtgtattatatattttaggaaatatttattattgtttggaa 2498  T
Q  107 cgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcatt 193  Q
    |||||||||| ||||||||||||||||||||||| | ||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  2497 cgatcctatagatgttccgacattttaggactttcctgatttgtttctgattcttgctttgcaggttaagctgaaccgatctgcatt 2411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 242 - 395
Target Start/End: Complemental strand, 2392 - 2241
Alignment:
Q  242 aggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggggttgagtcttcatgtattctgctcttgtatcgtttg 341  Q
    |||||||||||||||||||||||| |||||| | |||||| |||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  2392 aggaagacttcaagacctaattgttcattcaagccgtcattctaaaa-gtttagatttttagggtttaagtcttcatgtattctgctcttgtatcgtttg 2294  T
Q  342 tgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactt 395  Q
    ||| |||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  2293 tgacgcaagtttagaatctattgtgtgttc-ttcttgtatcgtctgtgatactt 2241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 135; Significance: 3e-70; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 102 - 411
Target Start/End: Complemental strand, 6519 - 6210
Alignment:
Q  102 tggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactga 201  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |   ||||||||||||| ||||||||||||||| |||| ||| |    
T  6519 tggaacgatcctataattgttccgacattttaggacttttcagatttgtttatgaattcagttttgcagatta-gctgaaccgatctgctttgt-actaa 6422  T
Q  202 agtccaacgtattatttagcccaagctacttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagattttt 301  Q
    || |||||| | ||||||||||||||| ||||||||||| |  ||||||||||||||||||||  |||| | | |||||||||||||| |||||||||||    
T  6421 agcccaacgaagtatttagcccaagctgcttcagtataaaaacaagacttcaagacctaattgctcatttaagccgtcatactaaaaaatttagattttt 6322  T
Q  302 aggg-gttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaatc--tagtgtgtgttctttcttgtatcgtctgtgatactt-tt 397  Q
    ||||  |||||||| ||||||||||| ||||||||| | | ||||||||||||||||||  || ||||||  ||| ||||||||| ||||||||||| ||    
T  6321 agggttttgagtctacatgtattctgttcttgtatcatgt-tgatgcaagtttagaatctttactgtgtg-ccttacttgtatcgcctgtgatacttgtt 6224  T
Q  398 taggactgtgtgtg 411  Q
    ||||||||||||||    
T  6223 taggactgtgtgtg 6210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 9346 - 9296
Alignment:
Q  42 aatcagctgtataatatttctaaagtgtattttatattttacgaaatattt 92  Q
    ||||||||||  ||||||||||||||  ||||||||||||| |||||||||    
T  9346 aatcagctgtggaatatttctaaagtagattttatattttaggaaatattt 9296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 40 - 411
Target Start/End: Original strand, 16106 - 16476
Alignment:
Q  40 agaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactt 139  Q
    |||||||| |||  ||||||||||||||  || ||||||||||  ||||||||  ||||| |||||||||||||| | ||||||||||||| | ||| ||    
T  16106 agaatcagatgttgaatatttctaaagtagatattatattttagaaaatatttgttattggttggaacgatcctaaagatgttccgacattctgggattt 16205  T
Q  140 ttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaacgtattatttagcccaagctacttcagtata 239  Q
    | || ||||||||||||||||||||||||||||| ||||||||  |||||| ||| | |||||| |||||  | ||||||||||||| | ||||| ||||    
T  16206 tccatatttgtttctgattcttgttttgcagatt-agctgaactaatctgctttg-tgctgaagcccaactaagtatttagcccaagatgcttcaatata 16303  T
Q  240 agaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagtcttcatgtattctgctcttgtatcgt 338  Q
      |||  ||||||| ||||||||||| |||||| | ||||||| ||||||||||||||||||||||  |||| | | |||||  |||  |||||||||||    
T  16304 taagggggacttcaggacctaattgttcattcaagccgtcatattaaaaagtttagatttttagggttttgaatttacatgtgctctattcttgtatcgt 16403  T
Q  339 ttgtgatgcaagtttagaatctagtgtgtgttctttcttgtatcgtctgtgatactt-tttaggactgtgtgtg 411  Q
    ||||||||| ||||||||| ||  ||||  | |||||||||||||| |||||||||| ||||||| ||| ||||    
T  16404 ttgtgatgcgagtttagaaccttttgtg-atcctttcttgtatcgtttgtgatacttgtttaggaatgtttgtg 16476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 40 - 357
Target Start/End: Original strand, 8064 - 8382
Alignment:
Q  40 agaatcagctgtataatatttctaaagt-gtattttatattttacgaaatatttaatattgtttgga-acgatcctataaatgttccgacattttaggac 137  Q
    ||||||||||||  |||| ||||||||| |||||| |||||||| |||||||||  ||||| ||||  ||||||||| | ||||||||||||||||||||    
T  8064 agaatcagctgtggaatacttctaaagtagtattt-atattttaggaaatatttgttattggttggggacgatcctaaagatgttccgacattttaggac 8162  T
Q  138 ttttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaac-gtattatttagcccaagctacttcagt 236  Q
    ||| || |||||||| ||||| ||||| |||||||| |||||||||||||||| ||| | || |||||||||   | ||||||||||||||| |||||||    
T  8163 tttccatatttgtttatgattgttgttatgcagatt-agctgaaccgatctgctttg-tgctaaagtccaactaaagtatttagcccaagctgcttcagt 8260  T
Q  237 ataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaagtttagatttttaggg-gttgagtcttcatgtattctgctcttgtat 335  Q
    |||  ||| |||||||||||||||||||  |||||| | || ||| |||| | |||| | |||||||||  |||||||| |||||  ||| ||||| |||    
T  8261 atataagggagacttcaagacctaattgatcattcaagccgacattctaagaggtttgggtttttagggttttgagtctacatgtgctctactcttttat 8360  T
Q  336 cgtttgtgatgcaagtttagaa 357  Q
    | ||||||||||||||||||||    
T  8361 catttgtgatgcaagtttagaa 8382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 40 - 208
Target Start/End: Original strand, 16811 - 16977
Alignment:
Q  40 agaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactt 139  Q
    ||||||||| ||  ||||||||||||||  ||||||||||||| |||||||||  ||||| |||||||||||||| | ||||||||||||||||||||||    
T  16811 agaatcagcggtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctaaagatgttccgacattttaggactt 16910  T
Q  140 ttcagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagtccaa 208  Q
    |||| ||||||||||||||  ||||| ||||||| |||||||||||||||| ||| | |||||||||||    
T  16911 ttcatatttgtttctgatttctgtttcgcagatt-agctgaaccgatctgctttg-tgctgaagtccaa 16977  T

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Target: scaffold0129 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 16212 - 16109
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| |||||||||||  |||||||||||||| |  ||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  16212 aacttattgatcaagcaacgcgcatatcttctaagaatcagctatggaatatttctaaagtgtattttatattttaggaaatatttattattgtttggaa 16113  T
Q  107 cgat 110  Q
    ||||    
T  16112 cgat 16109  T

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Target: scaffold0453 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 1453 - 1556
Alignment:
Q  7 aacttattgatcaagaaacgcgcatattatctaagaatcagctgtataatatttctaaagtgtattttatattttacgaaatatttaatattgtttggaa 106  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||  ||||||||| |||||| | |||    
T  1453 aacttattgatcaagcaacgcgcatatcatctaagaatcagctgtagaatatttctaaactgtattttatattttagcaaatatttattattgtctagaa 1552  T
Q  107 cgat 110  Q
    ||||    
T  1553 cgat 1556  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 27046 - 26947
Alignment:
Q  73 ttatattttacgaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagat 172  Q
    |||||||||| ||||||||| |  |||||| | ||| ||||| | ||||||| | ||||||||||||| || |||||| | |||||| ||||||| ||||    
T  27046 ttatattttaggaaatatttgaagttgttttggacgttcctaaagatgttcctatattttaggactttccatatttgtctttgattcctgttttgtagat 26947  T

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Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 355
Target Start/End: Complemental strand, 26891 - 26766
Alignment:
Q  230 cttcagtataagaggaagacttcaagacctaattgtccattcatgtcgtcatactaaaaag-tttagatttttaggggttgagtcttcatgtattctgct 328  Q
    ||||||||||| |||||||| ||||||||||||||   ||||| | | |||| |||||||| ||||| ||||  ||  || ||||||||||| ||||  |    
T  26891 cttcagtataaaaggaagacatcaagacctaattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctatt 26792  T
Q  329 cttgtatcgtttgtgatgcaagtttag 355  Q
    |||||||| | | ||||||||||||||    
T  26791 cttgtatcatgt-tgatgcaagtttag 26766  T

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Target: scaffold0480 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 11777 - 11732
Alignment:
Q  118 atgttccgacattttaggacttttcagatttgtttctgattcttgt 163  Q
    ||||||| ||||||||||||||| || ||||||| |||||||||||    
T  11777 atgttcctacattttaggactttccatatttgttgctgattcttgt 11732  T

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