View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4017-Insertion-29 (Length: 121)
Name: NF4017-Insertion-29
Description: NF4017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4017-Insertion-29 |
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| [»] chr8 (2 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 114; Significance: 3e-58; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 114; E-Value: 3e-58
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 1755597 - 1755710
Alignment:
| Q |
8 |
cctcttccctgccttaaaggctgcaacagatggcgataacattgcaaaacatcacactttcctgacaatttaccacaccacttttgttttggtgaatcag |
107 |
Q |
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| T |
1755597 |
cctcttccctgccttaaaggctgcaacagatggcgataacattgcaaaacatcacactttcctgacaatttaccacaccacttttgttttggtgaatcag |
1755696 |
T |
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| Q |
108 |
tcatatctatttag |
121 |
Q |
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|||||||||||||| |
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| T |
1755697 |
tcatatctatttag |
1755710 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 114; E-Value: 3e-58
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 1766153 - 1766040
Alignment:
| Q |
8 |
cctcttccctgccttaaaggctgcaacagatggcgataacattgcaaaacatcacactttcctgacaatttaccacaccacttttgttttggtgaatcag |
107 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1766153 |
cctcttccctgccttaaaggctgcaacagatggcgataacattgcaaaacatcacactttcctgacaatttaccacaccacttttgttttggtgaatcag |
1766054 |
T |
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| Q |
108 |
tcatatctatttag |
121 |
Q |
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|||||||||||||| |
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| T |
1766053 |
tcatatctatttag |
1766040 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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