View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4017_high_24 (Length: 342)
Name: NF4017_high_24
Description: NF4017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4017_high_24 |
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Alignment Details
Target: chr8 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 11 - 329
Target Start/End: Complemental strand, 36767471 - 36767147
Alignment:
| Q |
11 |
cagagacaacaatggtgaaaagagccctatcttgattcaaaccaacagctaatgactcaatgttgtatcctcttcttgcgaacactccagctattcggtt |
110 |
Q |
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| T |
36767471 |
cagaaacaacaatggtgaaaagagccctatcttgattcaaaccaacagctaatgactcaatgttgtatcctcttcttgcgaacactccagctattcggtt |
36767372 |
T |
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| Q |
111 |
aatcattccactctcatcaccaacgaacaccgaaatcgtgtgtctccgaactctgcagcattatcaataatcaatcaattaattaatcacaaatcagaat |
210 |
Q |
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| T |
36767371 |
aatcattccactctcatcaccaacgaacaccgaaatcgtgtgtctccgaactctgcagcattatcaataatcaatcaattaattaatcacaaatcagaat |
36767272 |
T |
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| Q |
211 |
attagtctaattgattagagaatacttactttgatcgagaaggtgaaggag------gagggccgttggaggagacggtggtgtcaccggaagtagcagc |
304 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36767271 |
attagtataattgattagagaatacttactttgatcgagaaggtgaaggaggaggaggagggccgttggaggagacggtggtgtcaccggaagtagcagc |
36767172 |
T |
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| Q |
305 |
ggcggagaggatgaggttgttgttg |
329 |
Q |
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||||||||||||||||||||||||| |
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| T |
36767171 |
ggcggagaggatgaggttgttgttg |
36767147 |
T |
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