View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4017_high_33 (Length: 289)

Name: NF4017_high_33
Description: NF4017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4017_high_33
NF4017_high_33
[»] scaffold0464 (1 HSPs)
scaffold0464 (11-289)||(228-507)
[»] chr4 (36 HSPs)
chr4 (11-289)||(18855592-18855871)
chr4 (11-285)||(5732531-5732809)
chr4 (22-285)||(45357248-45357512)
chr4 (11-285)||(3813893-3814168)
chr4 (22-285)||(45347768-45348033)
chr4 (22-285)||(9224358-9224622)
chr4 (22-285)||(51520326-51520591)
chr4 (22-285)||(9229145-9229409)
chr4 (24-285)||(56146664-56146927)
chr4 (61-172)||(24741924-24742036)
chr4 (61-172)||(29760625-29760737)
chr4 (86-154)||(28468557-28468625)
chr4 (61-155)||(10047378-10047476)
chr4 (61-155)||(39245993-39246091)
chr4 (61-155)||(36315230-36315327)
chr4 (61-155)||(36329439-36329536)
chr4 (61-154)||(31985635-31985730)
chr4 (70-155)||(38152449-38152537)
chr4 (61-155)||(16623293-16623391)
chr4 (86-154)||(5396699-5396768)
chr4 (86-155)||(5269219-5269289)
chr4 (61-154)||(3796519-3796616)
chr4 (71-153)||(5143260-5143345)
chr4 (70-155)||(24333808-24333896)
chr4 (71-153)||(5147678-5147763)
chr4 (91-150)||(16931789-16931849)
chr4 (91-150)||(16934143-16934203)
chr4 (91-150)||(22780373-22780433)
chr4 (91-150)||(44599838-44599898)
chr4 (61-153)||(3777550-3777645)
chr4 (70-149)||(6743425-6743507)
chr4 (61-155)||(16630680-16630778)
chr4 (91-150)||(6765117-6765177)
chr4 (91-150)||(7941596-7941656)
chr4 (91-150)||(18709164-18709224)
chr4 (91-150)||(22782738-22782798)
[»] chr1 (35 HSPs)
chr1 (11-289)||(39445365-39445644)
chr1 (11-289)||(44023814-44024092)
chr1 (11-289)||(1054952-1055231)
chr1 (11-289)||(25445029-25445309)
chr1 (11-287)||(43988401-43988683)
chr1 (22-289)||(41398103-41398369)
chr1 (22-172)||(41390565-41390714)
chr1 (61-172)||(24787366-24787477)
chr1 (61-154)||(24202770-24202865)
chr1 (61-154)||(19358844-19358939)
chr1 (61-154)||(19361433-19361528)
chr1 (61-154)||(19380073-19380168)
chr1 (61-154)||(26644898-26644994)
chr1 (70-155)||(47703946-47704034)
chr1 (61-154)||(19072928-19073025)
chr1 (61-154)||(19120818-19120915)
chr1 (86-155)||(9476260-9476330)
chr1 (61-155)||(16124516-16124614)
chr1 (61-155)||(27104372-27104470)
chr1 (91-154)||(3281708-3281772)
chr1 (70-155)||(13598397-13598485)
chr1 (70-155)||(29651810-29651898)
chr1 (11-57)||(25439836-25439882)
chr1 (63-154)||(37069770-37069864)
chr1 (91-155)||(775671-775736)
chr1 (91-155)||(47098857-47098922)
chr1 (86-154)||(13604651-13604720)
chr1 (91-124)||(21536602-21536635)
chr1 (91-150)||(9459419-9459479)
chr1 (91-150)||(9463246-9463306)
chr1 (91-150)||(16226386-16226446)
chr1 (91-155)||(32889438-32889503)
chr1 (91-151)||(47102874-47102935)
chr1 (91-150)||(23786058-23786118)
chr1 (91-150)||(51752582-51752642)
[»] chr7 (44 HSPs)
chr7 (11-289)||(19992178-19992458)
chr7 (11-285)||(21812178-21812454)
chr7 (22-289)||(31109535-31109802)
chr7 (22-285)||(24024278-24024543)
chr7 (22-285)||(12406201-12406465)
chr7 (11-285)||(24261262-24261539)
chr7 (22-285)||(12396781-12397045)
chr7 (11-285)||(24266141-24266418)
chr7 (11-285)||(16879942-16880218)
chr7 (11-285)||(16884798-16885074)
chr7 (66-285)||(4866599-4866820)
chr7 (61-272)||(20357549-20357761)
chr7 (61-195)||(2057927-2058061)
chr7 (61-154)||(1533445-1533540)
chr7 (61-154)||(18408764-18408859)
chr7 (61-154)||(21639809-21639904)
chr7 (61-154)||(18413641-18413735)
chr7 (61-154)||(21646007-21646102)
chr7 (61-155)||(29159802-29159900)
chr7 (71-153)||(21983285-21983370)
chr7 (61-155)||(46516310-46516408)
chr7 (61-155)||(49091660-49091758)
chr7 (91-155)||(9190041-9190106)
chr7 (91-155)||(20284088-20284153)
chr7 (61-154)||(44848685-44848781)
chr7 (61-155)||(2647696-2647794)
chr7 (61-155)||(33332450-33332548)
chr7 (91-155)||(2580389-2580454)
chr7 (61-155)||(55947-56044)
chr7 (91-155)||(9185198-9185263)
chr7 (91-151)||(28617258-28617319)
chr7 (91-150)||(31155911-31155971)
chr7 (86-155)||(35960815-35960885)
chr7 (86-154)||(47263678-47263745)
chr7 (91-150)||(1049296-1049356)
chr7 (91-150)||(2935497-2935557)
chr7 (91-150)||(3035953-3036013)
chr7 (91-150)||(7351652-7351712)
chr7 (107-154)||(8153466-8153514)
chr7 (91-150)||(9027194-9027254)
chr7 (91-150)||(22108295-22108355)
chr7 (91-150)||(22137306-22137366)
chr7 (91-150)||(40550055-40550115)
chr7 (91-150)||(40552333-40552393)
[»] chr6 (33 HSPs)
chr6 (11-285)||(6438370-6438645)
chr6 (11-289)||(28155510-28155790)
chr6 (11-287)||(6005285-6005563)
chr6 (22-289)||(28184368-28184638)
chr6 (11-287)||(16838612-16838890)
chr6 (22-289)||(14737528-14737796)
chr6 (22-289)||(14742388-14742655)
chr6 (11-287)||(33330384-33330664)
chr6 (22-285)||(22010648-22010912)
chr6 (11-287)||(33335881-33336161)
chr6 (22-285)||(11856841-11857108)
chr6 (61-153)||(5674771-5674865)
chr6 (109-287)||(5343348-5343527)
chr6 (61-154)||(5757479-5757575)
chr6 (86-154)||(21356036-21356105)
chr6 (71-155)||(10077176-10077263)
chr6 (61-155)||(5572241-5572339)
chr6 (86-155)||(31086501-31086571)
chr6 (91-155)||(31979512-31979577)
chr6 (91-154)||(4629954-4630018)
chr6 (86-123)||(22709050-22709087)
chr6 (91-155)||(31936586-31936651)
chr6 (91-150)||(12195515-12195575)
chr6 (91-142)||(21801377-21801429)
chr6 (61-155)||(22963699-22963796)
chr6 (61-155)||(23824597-23824694)
chr6 (91-150)||(4816231-4816291)
chr6 (91-150)||(5273216-5273276)
chr6 (91-150)||(19704567-19704627)
chr6 (91-150)||(20915356-20915416)
chr6 (91-150)||(26932562-26932622)
chr6 (91-150)||(29754709-29754769)
chr6 (91-150)||(33309110-33309170)
[»] chr5 (44 HSPs)
chr5 (11-289)||(28807514-28807794)
chr5 (11-289)||(37556562-37556843)
chr5 (11-289)||(37561384-37561665)
chr5 (11-287)||(2785243-2785521)
chr5 (11-287)||(33791184-33791462)
chr5 (22-285)||(15044556-15044819)
chr5 (22-285)||(43592148-43592413)
chr5 (12-287)||(33768047-33768324)
chr5 (22-285)||(1457113-1457377)
chr5 (11-287)||(31396930-31397210)
chr5 (22-285)||(27449683-27449948)
chr5 (22-285)||(43598593-43598858)
chr5 (22-285)||(43604085-43604350)
chr5 (22-285)||(43609577-43609842)
chr5 (22-285)||(27444839-27445104)
chr5 (11-287)||(31401787-31402067)
chr5 (22-285)||(30631277-30631541)
chr5 (22-232)||(31180138-31180348)
chr5 (61-154)||(38192174-38192269)
chr5 (61-154)||(38219399-38219494)
chr5 (61-154)||(35387663-35387758)
chr5 (61-154)||(24135849-24135944)
chr5 (61-154)||(9353333-9353429)
chr5 (61-154)||(36932351-36932447)
chr5 (61-154)||(10281751-10281848)
chr5 (61-154)||(15464532-15464628)
chr5 (86-155)||(17003988-17004058)
chr5 (61-153)||(11916972-11917068)
chr5 (91-155)||(28832258-28832323)
chr5 (91-150)||(4410241-4410301)
chr5 (61-154)||(14520230-14520326)
chr5 (61-155)||(3880298-3880396)
chr5 (61-151)||(12084176-12084269)
chr5 (61-154)||(19588746-19588843)
chr5 (91-155)||(42127443-42127508)
chr5 (91-150)||(15552464-15552524)
chr5 (91-150)||(31179371-31179431)
chr5 (91-150)||(31542953-31543013)
chr5 (91-150)||(31545299-31545359)
chr5 (97-150)||(27910675-27910729)
chr5 (91-155)||(31300629-31300694)
chr5 (91-150)||(3373137-3373197)
chr5 (91-150)||(10749919-10749979)
chr5 (91-150)||(15354575-15354635)
[»] chr8 (32 HSPs)
chr8 (11-289)||(39784763-39785043)
chr8 (11-287)||(35745259-35745537)
chr8 (22-289)||(25328230-25328497)
chr8 (24-285)||(7289879-7290142)
chr8 (11-285)||(10684203-10684480)
chr8 (22-285)||(6311167-6311431)
chr8 (61-255)||(33037808-33038001)
chr8 (61-285)||(4760076-4760301)
chr8 (61-172)||(36979361-36979473)
chr8 (61-172)||(10689144-10689256)
chr8 (61-255)||(30655543-30655742)
chr8 (61-172)||(18853168-18853281)
chr8 (61-172)||(18870562-18870675)
chr8 (86-154)||(26287902-26287970)
chr8 (86-154)||(26301159-26301227)
chr8 (86-154)||(26313153-26313221)
chr8 (61-154)||(1261955-1262050)
chr8 (70-155)||(26403240-26403328)
chr8 (61-154)||(31071230-31071326)
chr8 (61-154)||(4456028-4456124)
chr8 (86-155)||(4696624-4696694)
chr8 (91-152)||(9765852-9765914)
chr8 (61-151)||(7412344-7412437)
chr8 (61-154)||(19175755-19175851)
chr8 (61-155)||(23799577-23799675)
chr8 (61-155)||(5702483-5702581)
chr8 (61-151)||(6127224-6127318)
chr8 (91-155)||(19752427-19752492)
chr8 (91-150)||(43079877-43079937)
chr8 (91-150)||(43082248-43082308)
chr8 (91-124)||(18810982-18811015)
chr8 (91-150)||(44721118-44721178)
[»] chr2 (42 HSPs)
chr2 (22-289)||(39811940-39812207)
chr2 (11-285)||(19344290-19344567)
chr2 (11-285)||(19349148-19349425)
chr2 (22-285)||(32246654-32246921)
chr2 (22-285)||(44312575-44312839)
chr2 (22-271)||(11098889-11099139)
chr2 (61-271)||(14291372-14291584)
chr2 (61-271)||(9296402-9296614)
chr2 (61-154)||(3491751-3491846)
chr2 (61-154)||(25398496-25398591)
chr2 (61-154)||(25403634-25403729)
chr2 (70-155)||(8040059-8040147)
chr2 (86-154)||(40738844-40738911)
chr2 (61-151)||(13569331-13569425)
chr2 (61-155)||(21629943-21630040)
chr2 (61-155)||(14699008-14699105)
chr2 (61-154)||(28259178-28259274)
chr2 (61-155)||(10445444-10445542)
chr2 (61-155)||(17865202-17865300)
chr2 (61-155)||(20522219-20522317)
chr2 (61-155)||(34682334-34682432)
chr2 (61-124)||(25407653-25407718)
chr2 (61-153)||(34388859-34388955)
chr2 (61-153)||(10707252-10707348)
chr2 (86-151)||(8390178-8390244)
chr2 (91-154)||(31056044-31056108)
chr2 (91-150)||(35215586-35215646)
chr2 (91-150)||(35217963-35218023)
chr2 (86-155)||(33118135-33118205)
chr2 (61-155)||(33528621-33528719)
chr2 (86-155)||(39482930-39483000)
chr2 (91-151)||(1345574-1345635)
chr2 (91-151)||(2838063-2838124)
chr2 (86-154)||(23078498-23078567)
chr2 (86-154)||(36757790-36757859)
chr2 (86-154)||(42039697-42039766)
chr2 (94-150)||(45332181-45332238)
chr2 (70-155)||(16940219-16940307)
chr2 (70-155)||(17010884-17010972)
chr2 (91-150)||(23452237-23452297)
chr2 (91-150)||(36558864-36558924)
chr2 (91-150)||(36561141-36561201)
[»] scaffold0355 (3 HSPs)
scaffold0355 (11-289)||(9583-9859)
scaffold0355 (185-289)||(3-106)
scaffold0355 (11-69)||(3788-3845)
[»] chr3 (51 HSPs)
chr3 (11-285)||(18656301-18656579)
chr3 (11-287)||(2677026-2677305)
chr3 (11-287)||(2672870-2673149)
chr3 (11-287)||(8512083-8512363)
chr3 (11-287)||(8516963-8517243)
chr3 (22-285)||(22173146-22173410)
chr3 (6-287)||(24967975-24968258)
chr3 (11-211)||(32475430-32475629)
chr3 (11-211)||(32480288-32480487)
chr3 (22-289)||(28503826-28504084)
chr3 (61-271)||(7167129-7167340)
chr3 (106-287)||(10207801-10207983)
chr3 (61-172)||(2671587-2671699)
chr3 (61-172)||(8739064-8739176)
chr3 (61-172)||(9091302-9091414)
chr3 (61-172)||(40372796-40372908)
chr3 (61-174)||(8477343-8477458)
chr3 (61-154)||(26928592-26928687)
chr3 (61-154)||(1305949-1306044)
chr3 (22-111)||(28501659-28501750)
chr3 (61-154)||(8370477-8370573)
chr3 (61-154)||(27974943-27975039)
chr3 (61-154)||(32143321-32143417)
chr3 (61-155)||(18552873-18552971)
chr3 (61-155)||(21711222-21711319)
chr3 (86-154)||(27986464-27986533)
chr3 (61-154)||(16264350-16264446)
chr3 (61-154)||(27452958-27453054)
chr3 (61-153)||(36029094-36029190)
chr3 (61-151)||(1736295-1736389)
chr3 (86-154)||(30709808-30709877)
chr3 (86-154)||(33386684-33386753)
chr3 (61-155)||(3715992-3716090)
chr3 (93-154)||(25795781-25795843)
chr3 (61-155)||(40592772-40592870)
chr3 (61-155)||(48438213-48438311)
chr3 (91-155)||(1417513-1417578)
chr3 (61-155)||(6794704-6794801)
chr3 (61-155)||(26298987-26299085)
chr3 (91-155)||(37466290-37466355)
chr3 (88-124)||(4386947-4386983)
chr3 (91-150)||(38210569-38210629)
chr3 (91-150)||(50494198-50494258)
chr3 (87-150)||(53894055-53894119)
chr3 (93-155)||(47923931-47923994)
chr3 (91-155)||(3328379-3328444)
chr3 (86-154)||(39040010-39040079)
chr3 (91-150)||(458483-458543)
chr3 (91-150)||(6063444-6063504)
chr3 (91-150)||(10621528-10621588)
chr3 (107-154)||(39153357-39153405)
[»] scaffold0135 (1 HSPs)
scaffold0135 (22-285)||(35013-35277)
[»] scaffold0259 (1 HSPs)
scaffold0259 (11-287)||(2190-2468)
[»] scaffold0197 (2 HSPs)
scaffold0197 (11-287)||(19104-19382)
scaffold0197 (11-285)||(14248-14525)
[»] scaffold0028 (1 HSPs)
scaffold0028 (11-287)||(148895-149173)
[»] scaffold0009 (1 HSPs)
scaffold0009 (82-285)||(181976-182180)
[»] scaffold0188 (2 HSPs)
scaffold0188 (61-154)||(17953-18048)
scaffold0188 (61-154)||(24046-24141)
[»] scaffold0140 (3 HSPs)
scaffold0140 (61-154)||(8420-8516)
scaffold0140 (91-150)||(22343-22403)
scaffold0140 (91-150)||(24618-24678)
[»] scaffold0036 (1 HSPs)
scaffold0036 (91-153)||(85684-85747)
[»] scaffold0087 (2 HSPs)
scaffold0087 (61-154)||(43962-44058)
scaffold0087 (61-154)||(36833-36929)
[»] scaffold0006 (3 HSPs)
scaffold0006 (70-155)||(5682-5770)
scaffold0006 (70-155)||(2491-2579)
scaffold0006 (86-154)||(133308-133377)
[»] scaffold0148 (1 HSPs)
scaffold0148 (61-155)||(10728-10826)
[»] scaffold0098 (1 HSPs)
scaffold0098 (86-154)||(45253-45322)
[»] scaffold0978 (1 HSPs)
scaffold0978 (122-285)||(300-463)
[»] scaffold0267 (1 HSPs)
scaffold0267 (91-150)||(269-329)
[»] scaffold0154 (1 HSPs)
scaffold0154 (91-124)||(11500-11533)
[»] scaffold0025 (1 HSPs)
scaffold0025 (91-150)||(69292-69352)


Alignment Details
Target: scaffold0464 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 11 - 289
Target Start/End: Complemental strand, 507 - 228
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacacttcacatattggattggagagctgctctc 110  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  507 caaagggtagttctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaaccttttgtaacacttcacatattggattggagagctgctctc 408  T
Q  111 tcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgtaagctc- 209  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  407 tcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgttagctct 308  T
Q  210 ttgtgaggttttgctatacactagcttagggctgtttgttgttgttagcttggaagccatttgttctcattgattatcac 289  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  307 ttgtgtggttttgctatacactagcttagggctgtttgttgttgtttgcttggaagccatttgttctcattgattatcac 228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 252; Significance: 1e-140; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 11 - 289
Target Start/End: Complemental strand, 18855871 - 18855592
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacacttcacatattggattggagagctgctctc 110  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18855871 caaagggtagttctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaaccttttgtaacacttcacatattggattggagagctgctctc 18855772  T
Q  111 tcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgtaagctc- 209  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  18855771 tcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgttagctct 18855672  T
Q  210 ttgtgaggttttgctatacactagcttagggctgtttgttgttgttagcttggaagccatttgttctcattgattatcac 289  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18855671 ttgtgtggttttgctatacactagcttagggctgtttgttgttgtttgcttggaagccatttgttctcattgattatcac 18855592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 11 - 285
Target Start/End: Complemental strand, 5732809 - 5732531
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctct 109  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  5732809 caaagggtagatctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaaccttttgtaacactttctcatattggattggagagctgctct 5732711  T
Q  110 ctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg----ttttgttctttccttttaccgtttatcttgtttatgc-ttgta 204  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || |||    ||||||||||||| ||||||||||||||||||  ||| ||||     
T  5732710 ctcccccagattaggccatattggctgaactgggtcaacaatcttgttcagtgttttttttgttctttcc-tttaccgtttatcttgtt--tgctttgtt 5732614  T
Q  205 agctc-ttgtgaggttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  5732613 agctctttgtgtggttttactatacactagcttagggctgttttgttgttgttagcttggagaccatttgttctcattgatta 5732531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 22 - 285
Target Start/End: Original strand, 45357248 - 45357512
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagat 120  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  45357248 tctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagat 45357346  T
Q  121 taggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctcttgtgaggtt 219  Q
    || |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||| || |||||||| ||||    
T  45357347 tatgccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctttccttttaccgcttatcttgtttgtgctttggaatctcttgtgtggtt 45357445  T
Q  220 ttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||| ||||||||  |||| ||| |||||||||||||||||| |  |||||||||||||| |||||    
T  45357446 ttgctttacactagtctaggactgttttgttgttgttagcttgaagaccatttgttctcatagatta 45357512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 11 - 285
Target Start/End: Complemental strand, 3814168 - 3813893
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctct 109  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3814168 caaagggtagatctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctct 3814070  T
Q  110 ctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgtaagctc 209  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||  | |||   | ||||||||||||||||||| |||||    
T  3814069 ctcccccagattaggccatattggctgaactgggtcaacaatcttgcatggtgttttgttctt--cctttcttgcttatcttgtttatgcttgttagctc 3813972  T
Q  210 -ttgtgagg-ttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
     ||||| || |||||| |||||||||  |||| ||| |||||||||||| |||||||  ||||||| ||||||||||||    
T  3813971 tttgtgtggtttttgcgatacactagtctaggactgttttgttgttgtttgcttggagaccatttgctctcattgatta 3813893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 22 - 285
Target Start/End: Original strand, 45347768 - 45348033
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagag-tcttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccaga 119  Q
    ||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  45347768 tctagggtttgttcatgtgtaaagcttga-aggctagaggtcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccaga 45347866  T
Q  120 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctcttgtgaggt 218  Q
    ||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||| || |||||||| |||    
T  45347867 ttaagccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctttccttttaccgcttatcttgtttgtgctttggaatctcttgtgtggt 45347965  T
Q  219 tttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    |||||| ||||||||  |||| ||| |||||||||||||||||| |  |||||||||||||| |||||    
T  45347966 tttgctttacactagtctaggactgttttgttgttgttagcttgaagaccatttgttctcatagatta 45348033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 22 - 285
Target Start/End: Original strand, 9224358 - 9224622
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccaga 119  Q
    ||||||||||||||||||||||||||||| | |||||||| ||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  9224358 tctagggtttgttcatgtgtaaagcttga-aggctagagttcttctaaccttttgtaacactttctcatattggattggagagctgctctctcccccaga 9224456  T
Q  120 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgagg 217  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||| ||| |||  | ||| ||||| ||    
T  9224457 ttaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc-ttccttttaccgcttatcttgttt-tgctttggtatctctttgtgtgg 9224553  T
Q  218 ttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  9224554 ttttgctatacactagtctagggctgttttgttgttgtttgcttggagaccatttgttctcattgatta 9224622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 22 - 285
Target Start/End: Complemental strand, 51520591 - 51520326
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccaga 119  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  51520591 tctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccaga 51520493  T
Q  120 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgctt-gtaagctctt-gtgagg 217  Q
    |||||||| |||||| ||||||||||||||||||| ||||||||||||||||| ||||||| |  ||||||||||||||||| || | ||||| ||  ||    
T  51520492 ttaggccatattggcagaactgggtcaacaatctt-ctcggtgttttgttctt-ccttttatcacttatcttgtttatgctttgttatctctttgtatgg 51520395  T
Q  218 ttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  51520394 ttttgctatacactagtctagggctgctttgttgttgtttgcttggagaccatttgttctcattgatta 51520326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 22 - 285
Target Start/End: Original strand, 9229145 - 9229409
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccaga 119  Q
    ||||||||||||||||||||||||||||| | |||||||| ||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  9229145 tctagggtttgttcatgtgtaaagcttga-aggctagagttcttctaaccttttgtaacactttctcatattggattggagagctgctctctcccccaga 9229243  T
Q  120 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgagg 217  Q
    |||||||| |||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||||||| ||| |||  | ||| ||||| ||    
T  9229244 ttaggccatattggctgaactgggttaacaatctt-ctcggtgttttgttc-ttccttttaccgcttatcttgttt-tgctttggtatctctttgtgtgg 9229340  T
Q  218 ttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  9229341 ttttgctatacactagtctagggctgttttgttgttgtttgcttggagaccatttgttctcattgatta 9229409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 24 - 285
Target Start/End: Original strand, 56146664 - 56146927
Alignment:
Q  24 tagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagatt 121  Q
    ||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  56146664 tagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagatt 56146762  T
Q  122 aggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgaggtt 219  Q
    |||||| ||||||||||||||  |||||||||| ||||||||||||||| ||||||||| |  ||||||||||||||| |||| | ||| ||||| ||||    
T  56146763 aggccatattggctgaactggaccaacaatctt-ctcggtgttttgttc-ttccttttatcacttatcttgtttatgctttgttatctctttgtgtggtt 56146860  T
Q  220 ttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||||||||||||  |||||||| |||||||||||| |||||||  ||| ||||||||||||||||    
T  56146861 ttgctatacactagtctagggctgctttgttgttgtttgcttggagaccaattgttctcattgatta 56146927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 172
Target Start/End: Complemental strand, 24742036 - 24741924
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctc 158  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     
T  24742036 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctt 24741938  T
Q  159 ggtgttttgttctt 172  Q
    ||||||||||||||    
T  24741937 ggtgttttgttctt 24741924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 172
Target Start/End: Complemental strand, 29760737 - 29760625
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctc 158  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     
T  29760737 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctt 29760639  T
Q  159 ggtgttttgttctt 172  Q
    ||||||||||||||    
T  29760638 ggtgttttgttctt 29760625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 28468557 - 28468625
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||| ||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||    
T  28468557 catagtggattggagagctgctctctcctccagattaggtcatattggctgaactgggtcaacaatctt 28468625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 10047476 - 10047378
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| |||||||||| ||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  10047476 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 10047378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 39246091 - 39245993
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| |||||||||| ||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  39246091 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 39245993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 36315230 - 36315327
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||  |||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||| |||||    
T  36315230 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacattcttg 36315327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 36329439 - 36329536
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||  |||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||| |||||    
T  36329439 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacattcttg 36329536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 31985635 - 31985730
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || |||| ||||||||||||||||||||| |||||||||||| || ||||| | |||||||||||||||||||    
T  31985635 tcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctct-ccccagattaggtcatattggaccgaactgggtcaacaatctt 31985730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 38152449 - 38152537
Alignment:
Q  70 cttttgtaacactt-cac-atattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||||||||||||| | || ||||| | ||||||||||||||||||||    
T  38152449 cttttgtaacactttcaccatagtggattggagagctgctctctcccccagattatgtcatattggaccgaactgggtcaacaatcttg 38152537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 16623293 - 16623391
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| ||||||||||||||||||||||| |||||||||| || ||||  | ||||||||||||||||||||    
T  16623293 tcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattgaaccgaactgggtcaacaatcttg 16623391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 5396699 - 5396768
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||| ||||||||||||||||||||||| |||||||||| || ||||| | |||||||||||||||||||    
T  5396699 catagtggattggagagctgctctctcctccagattaggtcatattggaccgaactgggtcaacaatctt 5396768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 155
Target Start/End: Original strand, 5269219 - 5269289
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||| |||||||||| ||||||||||||||||||||||| || ||||| | ||||| ||||||||||||||    
T  5269219 catagtggattggagggctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatcttg 5269289  T

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Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 3796519 - 3796616
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    ||||||||| |||||||||||||| || |||| |||||| ||||| |||||||||||||| |||||| || ||||| | |||||||||||||||||||    
T  3796519 tcttgtaactcttttgtaacactttcatcatagtggattagagagttgctctctcccccatattaggtcatattggacggaactgggtcaacaatctt 3796616  T

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Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 5143345 - 5143260
Alignment:
Q  71 ttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatct 153  Q
    ||||||||||||| || |||| ||| |||||||||||||||||||||||||||||| || ||||| | ||||| ||||||||||||    
T  5143345 ttttgtaacactttcatcatagtgggttggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatct 5143260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 24333896 - 24333808
Alignment:
Q  70 cttttgtaacac-ttca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||||| |||| |||| ||||||||||||||||||||||||||| |||||| || ||||| | |||||| || ||||||||||    
T  24333896 cttttgtaacacgttcatcatagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgagttaacaatcttg 24333808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 5147763 - 5147678
Alignment:
Q  71 ttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatct 153  Q
    ||||||||||||| || |||| |||| ||||||||||||| |||||||| |||||| || ||||| | ||||||||||||||||||    
T  5147763 ttttgtaacactttcatcataatggactggagagctgctccctcccccaaattaggtcatattggaccgaactgggtcaacaatct 5147678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 16931849 - 16931789
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  16931849 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 16931789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 16934203 - 16934143
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  16934203 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 16934143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 22780433 - 22780373
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  22780433 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 22780373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 44599898 - 44599838
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  44599898 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 44599838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 153
Target Start/End: Complemental strand, 3777645 - 3777550
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatct 153  Q
    |||||||||  |||||||||||| || |||| |||||||||||||| |||||||| | ||||||||  | ||||| | ||||||||||||||||||    
T  3777645 tcttgtaactctttgtaacactttcatcatagtggattggagagctactctctcctctagattaggttatattggaccgaactgggtcaacaatct 3777550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 149
Target Start/End: Original strand, 6743425 - 6743507
Alignment:
Q  70 cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaaca 149  Q
    |||||||||||||| || |||| |||||||||| |||||||||||||  |||||||| || ||||| | ||||||||||||||    
T  6743425 cttttgtaacactttcatcatagtggattggagggctgctctctcccgtagattaggtcatattggaccgaactgggtcaaca 6743507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 16630680 - 16630778
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| ||||||||||||||| ||||||| |||||||| | || ||||| | ||||| ||||||||| ||||    
T  16630680 tcttgtaactcttttgtaacactttcatcatagtggattggagagctgttctctcctccagattatgtcatattggaccgaactaggtcaacaaccttg 16630778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 6765117 - 6765177
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  6765117 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 6765177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 7941596 - 7941656
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  7941596 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 7941656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 18709224 - 18709164
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    ||||||||||  ||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  18709224 tggattggaggactgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 18709164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 22782798 - 22782738
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | ||||||| |||||||    
T  22782798 tggattggagggctgctctctcccccagactaggtcagattggaccgaactggatcaacaa 22782738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 248; Significance: 1e-138; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 11 - 289
Target Start/End: Complemental strand, 39445644 - 39445365
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacacttcacatattggattggagagctgctctc 110  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39445644 caaagggtagttctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaaccttttgtaacacttcacatattggattggagagctgctctc 39445545  T
Q  111 tcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgtaagctc- 209  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  39445544 tcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgttagctct 39445445  T
Q  210 ttgtgaggttttgctatacactagcttagggctgtttgttgttgttagcttggaagccatttgttctcattgattatcac 289  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  39445444 ttgtgtggttttgctatacactagcttagggctgtttgttgttgtttgcttggaagccatttgttcacattgattatcac 39445365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 11 - 289
Target Start/End: Original strand, 44023814 - 44024092
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacacttcacatattggattggagagctgctctc 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44023814 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacacttcacatattggattggagagctgctctc 44023913  T
Q  111 tcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgtaagctc- 209  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||     
T  44023914 tcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttcc-tttaccatttatcttgtttatgcttgttagctct 44024012  T
Q  210 ttgtgaggttttgctatacactagcttagggctgtttgttgttgttagcttggaagccatttgttctcattgattatcac 289  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44024013 ttgtgtggttttgctatacactagcttagggctgtttgttgttgtttgcttggaagccatttgttctcattgattatcac 44024092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 11 - 289
Target Start/End: Original strand, 1054952 - 1055231
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacacttcacatattggattggagagctgctctc 110  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1054952 caaagggtagttctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaaccttttgtaacacttcacatattggattggagagttgctctc 1055051  T
Q  111 tcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgtaagctc- 209  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  1055052 tcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgttagctct 1055151  T
Q  210 ttgtgaggttttgctatacactagcttagggctgtttgttgttgttagcttggaagccatttgttctcattgattatcac 289  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||    
T  1055152 ttgtgtggttttgctatacactagcttagggctgtttgttgttgtaagcttggaagacatttgttcacattgattatcac 1055231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 11 - 289
Target Start/End: Original strand, 25445029 - 25445309
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctct 109  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  25445029 caaagggtagctctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaaccttttgtaacactttctcatattggattggagagctgctct 25445128  T
Q  110 ctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgtaagctc 209  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  25445129 ctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttacgcttgttagctc 25445228  T
Q  210 -ttgtgaggttttgctatacactagcttagggctgtttgttgttgttagcttggaagccatttgttctcattgattatcac 289  Q
     ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25445229 tttgtgtggttttgctatacactagcttagggctgtttgttgttgtttgcttggaagccatttgttctcattgattatcac 25445309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 11 - 287
Target Start/End: Original strand, 43988401 - 43988683
Alignment:
Q  11 caaagggtagttctagggtttgtt--catgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgc 106  Q
    |||||||||| |||||||||| ||  | |||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  43988401 caaagggtagatctagggttttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgc 43988500  T
Q  107 tctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccg--tttatcttgtttatgcttgta 204  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||   |  |||||||||  |||||||||     
T  43988501 tctctcccccagattaggccacattggctgaactgggtaaacaatcttgcttggtgttttgttcttttcttttcatggttttatcttg--tatgcttgtt 43988598  T
Q  205 agctctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    ||||||| ||| |||| ||||||||| || ||||| ||||| ||||||||||||||||||||||||||||| |||||| |||||||    
T  43988599 agctcttagtgtggttgtgctatacattaggctta-ggctgttttgttgttgttagcttggaagccatttgctctcatagattatc 43988683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 22 - 289
Target Start/End: Complemental strand, 41398369 - 41398103
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagat 120  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  41398369 tctagggtttgttcatgtgtaaagcttga-aggctagagtcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagat 41398271  T
Q  121 taggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgagg- 217  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||| ||||||       ||||||||||||||| |||  | ||| ||||| ||     
T  41398270 taggccatattggctgacctgggtcaacaatctt-ctcggtgttttgttc-ttcctt------cttatcttgtttatgctttggtatctctttgtgtggt 41398179  T
Q  218 -ttttgctatacactagcttagggctgt----ttgttgttgttagcttggaagccatttgttctcattgattatcac 289  Q
     |||||||||||||||| ||||||||||    ||||||||||| |||||||  |||| |||||||||||||||||||    
T  41398178 tttttgctatacactag-ttagggctgttttgttgttgttgtttgcttggagaccatatgttctcattgattatcac 41398103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 22 - 172
Target Start/End: Complemental strand, 41390714 - 41390565
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagat 120  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  41390714 tctagggtttgttcatgtgtaaagcttga-aggctagagtcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagat 41390616  T
Q  121 taggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctt 172  Q
    ||||||| ||||||||| |||||||||||||||| |||| ||||||||||||    
T  41390615 taggccatattggctgatctgggtcaacaatctt-ctcgatgttttgttctt 41390565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 24787366 - 24787477
Alignment:
Q  61 tcttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcg 159  Q
    |||||||||| |||||||||||| | ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| || |    
T  24787366 tcttgtaaccctttgtaacactttctcatattggattggagagctgctctcccccccagattaggccatattggctgaactgggtcaacaatctt-cttg 24787464  T
Q  160 gtgttttgttctt 172  Q
    |||||||||||||    
T  24787465 gtgttttgttctt 24787477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 24202770 - 24202865
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24202770 tcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 24202865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 19358844 - 19358939
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||| |||||| || |||| |||||||||||||||||||||    
T  19358844 tcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactgggtcaacaatctt 19358939  T

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Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 19361433 - 19361528
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||| |||||| || |||| |||||||||||||||||||||    
T  19361433 tcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactgggtcaacaatctt 19361528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 19380073 - 19380168
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||| |||||| || |||| |||||||||||||||||||||    
T  19380073 tcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactgggtcaacaatctt 19380168  T

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Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 26644898 - 26644994
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||  |||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  26644898 tcttgtaactctttgtaacactttcatcataatggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 26644994  T

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Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 47703946 - 47704034
Alignment:
Q  70 cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  47703946 cttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 47704034  T

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Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 19073025 - 19072928
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    ||||||||| |||||||||||||| || | || |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  19073025 tcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 19072928  T

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Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 19120915 - 19120818
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    ||||||||| |||||||||||||| || | || |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  19120915 tcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 19120818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 155
Target Start/End: Complemental strand, 9476330 - 9476260
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||| ||||||||||||||||||||||||| |||||||| || ||||| | ||||||||||||||||||||    
T  9476330 catagtggattggagagctgctctctcccctagattaggtcatattggaccgaactgggtcaacaatcttg 9476260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 16124516 - 16124614
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| |||||||||| ||||||||||||||||||||||| || ||||| | |||||| |||||||||||||    
T  16124516 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgagtcaacaatcttg 16124614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 27104372 - 27104470
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| ||||||||||||||||||||||||||||||||||  | ||||| | |||||| |||||||||||||    
T  27104372 tcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggttatattggaccgaactgtgtcaacaatcttg 27104470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 3281772 - 3281708
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||| ||||||    
T  3281772 tggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaataatctt 3281708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 13598485 - 13598397
Alignment:
Q  70 cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||||||| || |||| ||||||| || ||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  13598485 cttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 13598397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 29651898 - 29651810
Alignment:
Q  70 cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||||||| || |||| |||||||||| ||||||||||||||||||||||| || ||||| | |||||||||||| |||||||    
T  29651898 cttttgtaacactttcatcatagtggattggagtgctgctctctcccccagattaggtcatattggaccgaactgggtcaaaaatcttg 29651810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 25439836 - 25439882
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagcta 57  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||    
T  25439836 caaagggtagctctagggtttgttcatgtgtaaagcttgataagcta 25439882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 154
Target Start/End: Complemental strand, 37069864 - 37069770
Alignment:
Q  63 ttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||  |||||||||||| || |||| ||||| |||||| ||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  37069864 ttgtaactctttgtaacactttcatcatagtggatcggagagatgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 37069770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 155
Target Start/End: Complemental strand, 775736 - 775671
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||||||| ||||||||||||||||||| || ||||| | ||| ||||||||||||||||    
T  775736 tggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaacaatcttg 775671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 47098857 - 47098922
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||| |||||||||||||||||||| || || ||||| | ||||||||||||||||||||    
T  47098857 tggattggagggctgctctctcccccagattcggtcatattggaccgaactgggtcaacaatcttg 47098922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 13604651 - 13604720
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaatctt 154  Q
    |||| ||||||||||||||||||||||||||| |||||| || ||||  |  ||||||||||||||||||    
T  13604651 catagtggattggagagctgctctctcccccatattaggtcatattgaacctaactgggtcaacaatctt 13604720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 124
Target Start/End: Original strand, 21536602 - 21536635
Alignment:
Q  91 tggattggagagctgctctctcccccagattagg 124  Q
    ||||||||||||||||||||||||||||||||||    
T  21536602 tggattggagagctgctctctcccccagattagg 21536635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 9459479 - 9459419
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  9459479 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 9459419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 9463306 - 9463246
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  9463306 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 9463246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 16226386 - 16226446
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  16226386 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 16226446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 155
Target Start/End: Complemental strand, 32889503 - 32889438
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||||||||||||| ||||||||| |||| || ||||| | ||||| | ||||||||||||    
T  32889503 tggattggagagctgctctatcccccagactaggtcatattggaccgaactagatcaacaatcttg 32889438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 47102874 - 47102935
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaat 151  Q
    |||||||||  |||||||||||||| |||||||| || ||||| | ||||||||||||||||    
T  47102874 tggattggatggctgctctctcccctagattaggtcatattggaccgaactgggtcaacaat 47102935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 23786058 - 23786118
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  23786058 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 23786118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 51752582 - 51752642
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  51752582 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 51752642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 11 - 289
Target Start/End: Complemental strand, 19992458 - 19992178
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctct 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19992458 caaagggtagttctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctct 19992359  T
Q  110 ctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgtaagctc 209  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19992358 ctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgttagctc 19992259  T
Q  210 -ttgtgaggttttgctatacactagcttagggctgtttgttgttgttagcttggaagccatttgttctcattgattatcac 289  Q
     ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19992258 tttgtgtggttttgctatacactagcttagggctgtttgttgttgtaagcttggaagccatttgttctcattgattatcac 19992178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 11 - 285
Target Start/End: Original strand, 21812178 - 21812454
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagctt-gacaagctagagtcttgtaaccttttgtaacacttcacatattggattggagagctgctct 109  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||    
T  21812178 caaagggtagatctagggtttgttcatgtgtaaagctttgacaagctagagtcttggaaccttttgtaagacttcacatattggattggaaagctgctct 21812277  T
Q  110 ctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgtaagctc 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||    
T  21812278 ctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcttttcttttaccgtttatcttgtttatgcttgttaactc 21812377  T
Q  210 -ttgtgaggttttgctatacactagcttagggctgtttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
     ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  21812378 tttgtgtggttttgctatacactagcttagggctgtttgttgttgttagcttggaagccatttgctctcatagatta 21812454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 22 - 289
Target Start/End: Original strand, 31109535 - 31109802
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagat 120  Q
    ||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||    
T  31109535 tctagggtttgttcatgtgcaaagcttga-aggctagagtcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccctagat 31109633  T
Q  121 taggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctcttgtgaggtt 219  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||   ||||||||||||||||| ||| || |||||||| ||||    
T  31109634 taggccatattggctgaactgggtcaacaatcttgttcggtgttttgttc-ttccttttcttgtttatcttgtttatgctttggaatctcttgtgtggtt 31109732  T
Q  220 ttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatcac 289  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||  ||||||||||||||||||||||||    
T  31109733 ttgctatacactag-ttagggctgttttgttgttgttggcttggagaccatttgttctcattgattatcac 31109802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 22 - 285
Target Start/End: Original strand, 24024278 - 24024543
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagat 120  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  24024278 tctagggtttgttcatgtgtaaagcttga-aggctagagtcttgtaacattttgtaacactttctcatattggattggagagctgctctctcccccagat 24024376  T
Q  121 taggccacattggctgaactgggtcaacaatcttgctcggtg-ttttgttctttccttttaccgtttatcttgtttatgcttgtaagctc-ttgtgaggt 218  Q
    ||||||| ||||||||||||||||||||||||||| |||||| |||||||| ||||||||   | ||||||||||||||||||| ||||| ||||| |||    
T  24024377 taggccatattggctgaactgggtcaacaatcttgttcggtgtttttgttc-ttccttttcttgcttatcttgtttatgcttgttagctctttgtgtggt 24024475  T
Q  219 tttgctatacactag-cttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||||||| ||||| | || ||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  24024476 tttgctatatactagtcata-ggctgttttgttgttgtttgcttggagaccatttgttctcattgatta 24024543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 22 - 285
Target Start/End: Complemental strand, 12406465 - 12406201
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccaga 119  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | |||||||||||||||||||  |||||||||||||    
T  12406465 tctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctattctctcccccaga 12406367  T
Q  120 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgagg 217  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||| |||  | ||| ||||| ||    
T  12406366 ttaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttcttt-cttttaccgcttatcttgttt-tgctttggtatctctttgtgtgg 12406270  T
Q  218 ttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  12406269 ttttgctatacactagtctagggctgctttgttgttgtttgcttggagaccatttgttctcattgatta 12406201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 11 - 285
Target Start/End: Original strand, 24261262 - 24261539
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 108  Q
    |||||||||| ||||||||||  || |||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  24261262 caaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 24261361  T
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttccttttaccgtttatcttgtttatgcttgtaagc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||| |||||||||||  ||||||||| |||    
T  24261362 tctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcttttatcgtttatcttg--tatgcttgttagc 24261459  T
Q  208 tctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttg-ttagcttggaagccatttgttctcattgatta 285  Q
    |||| ||| || |||||| |||| || ||||| ||||| |||||||||| |||||||||| ||||||||  ||||| |||||    
T  24261460 tcttagtgtggatttgct-tacattaggctta-ggctgttttgttgttgattagcttggaggccatttgcactcatagatta 24261539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 22 - 285
Target Start/End: Complemental strand, 12397045 - 12396781
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccaga 119  Q
    |||||||||||||||||||||||| || | | |||||||| |||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||    
T  12397045 tctagggtttgttcatgtgtaaagattaa-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgttctctcccccaga 12396947  T
Q  120 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgagg 217  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||||| ||| |||  | ||| ||||| ||    
T  12396946 ttaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc-ttccctttaccgcttatcttgttt-tgctttggtatctctttgtgtgg 12396850  T
Q  218 ttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  12396849 ttttgctatacactagtctagggctgctttgttgttgtttgcttggagaccatttgttctcattgatta 12396781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 11 - 285
Target Start/End: Original strand, 24266141 - 24266418
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 108  Q
    |||||||||| ||||||||||  || |||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  24266141 caaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 24266240  T
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttccttttaccgtttatcttgtttatgcttgtaagc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||| |||||||||||  ||||||||| |||    
T  24266241 tctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcctttatcgtttatcttg--tatgcttgttagc 24266338  T
Q  208 tctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttg-ttagcttggaagccatttgttctcattgatta 285  Q
    |||| ||| || |||||| |||| || ||||| ||||| |||||||||| |||||||||| ||||||||  ||||| |||||    
T  24266339 tcttagtgtggatttgct-tacattaggctta-ggctgttttgttgttgattagcttggaggccatttgcactcatagatta 24266418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 11 - 285
Target Start/End: Complemental strand, 16880218 - 16879942
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacac-ttcacatattggattggagagctgctct 109  Q
    |||||||||| ||||||||||  || |||||||||||||| |||||||| |||||||||  ||||||| || ||||||||||||||||||||||||||||    
T  16880218 caaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactctttgtaaaacattcacatattggattggagagctgctct 16880119  T
Q  110 ctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttccttttaccgtttatcttgtttatgcttgtaagct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||| |||||||||||  ||||||||| ||||    
T  16880118 ctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcttttatcgtttatcttg--tatgcttgttagct 16880021  T
Q  209 ctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttg-ttagcttggaagccatttgttctcattgatta 285  Q
    ||| ||| || |||||| |||| || ||||| ||||| |||||||||| |||||||||| ||||||||  ||||| |||||    
T  16880020 cttagtgtggatttgct-tacattaggctta-ggctgttttgttgttgattagcttggaggccatttgcactcatagatta 16879942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 11 - 285
Target Start/End: Complemental strand, 16885074 - 16884798
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacac-ttcacatattggattggagagctgctct 109  Q
    |||||||||| ||||||||||  || |||||||||||||| |||||||| |||||||||  ||||||| || ||||||||||||||||||||||||||||    
T  16885074 caaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactctttgtaaaacattcacatattggattggagagctgctct 16884975  T
Q  110 ctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttccttttaccgtttatcttgtttatgcttgtaagct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||| |||||||||||  ||||||||| ||||    
T  16884974 ctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcttttatcgtttatcttg--tatgcttgttagct 16884877  T
Q  209 ctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttg-ttagcttggaagccatttgttctcattgatta 285  Q
    ||| ||| || |||||| |||| || ||||| ||||| |||||||||| |||||||||| ||||||||  ||||| |||||    
T  16884876 cttagtgtggatttgct-tacattaggctta-ggctgttttgttgttgattagcttggaggccatttgcactcatagatta 16884798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 66 - 285
Target Start/End: Complemental strand, 4866820 - 4866599
Alignment:
Q  66 taaccttttgtaacactt-cacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtt 164  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  4866820 taaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgtt 4866722  T
Q  165 ttgttctttccttttaccgtttatcttgtttatgctt--gtaagctcttgtgagg-ttttgctatacactagcttagggctg-tttgttgttgttagctt 260  Q
    |||||| |||||||||||| ||||||||||| |||||  |||   | ||||| || ||||||||||||||||  |||| ||| |||||||||||| ||||    
T  4866721 ttgttc-ttccttttaccgcttatcttgttt-tgctttggtatctttttgtgtggtttttgctatacactagtctaggactgttttgttgttgtttgctt 4866624  T
Q  261 ggaagccatttgttctcattgatta 285  Q
    |||  |||||||| |||||||||||    
T  4866623 ggagaccatttgtcctcattgatta 4866599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 61 - 272
Target Start/End: Original strand, 20357549 - 20357761
Alignment:
Q  61 tcttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcg 159  Q
    |||||||||| |||||||||||| | |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| || |    
T  20357549 tcttgtaaccctttgtaacactttctcatattggattggagagctgctctctcccccaaattaggccatattggctgaactgggtcaacaatctt-cttg 20357647  T
Q  160 gtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgaggttttgctatacactagcttagggctg--tttgttgttgtt 255  Q
    || |||||||| ||||||||   | ||||||||||  ||| |||| | ||| ||||| ||||||||| ||||||||  ||||||||  ||||||||||||    
T  20357648 gtattttgttc-ttccttttcttgcttatcttgtt--tgctttgttatctctttgtgtggttttgctctacactagtctagggctgtttttgttgttgtt 20357744  T
Q  256 agcttggaagccatttg 272  Q
    ||||||||  |||||||    
T  20357745 agcttggagaccatttg 20357761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 61 - 195
Target Start/End: Complemental strand, 2058061 - 2057927
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctc 158  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     
T  2058061 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctt 2057963  T
Q  159 ggtgttttgttctttccttttaccgtttatcttgttt 195  Q
    |||||||||||| |||||||||  | |||||||||||    
T  2057962 ggtgttttgttc-ttccttttattgcttatcttgttt 2057927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 1533445 - 1533540
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1533445 tcttgtaaccctttgtaacactttcatcatattggattggagagatgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 1533540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 18408859 - 18408764
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18408859 tcttgtaaccctttgtaacactttcatcatactggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 18408764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 21639904 - 21639809
Alignment:
Q  61 tcttgtaaccttttgtaacactt-cac-atattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| ||  ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21639904 tcttgtaaccctttgtaacactttcattatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 21639809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 18413735 - 18413641
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || |||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  18413735 tcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccc-agattaggccatattggctgaactgggtcaacaatctt 18413641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 21646102 - 21646007
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| ||| |||||||| || |||| ||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  21646102 tcttgtaaccctttttaacactttcatcatagtggattggagagctgctctcttccctagattaggccatattggctgaactgggtcaacaatctt 21646007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 29159900 - 29159802
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| ||||||||||||||||||||||||| |||||||| || ||||| | ||||||||||||||||||||    
T  29159900 tcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccctagattaggtcatattggaccgaactgggtcaacaatcttg 29159802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 21983370 - 21983285
Alignment:
Q  71 ttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatct 153  Q
    ||||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||| | ||||||||||||||||||    
T  21983370 ttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatct 21983285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 46516310 - 46516408
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| |||||||||| |||||||||||||| |||||||| || ||||| | ||||||||||||||||||||    
T  46516310 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattggaccgaactgggtcaacaatcttg 46516408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 49091758 - 49091660
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| |||||||||||| |||||||| |||||||||||| || ||||| || |||||||||||||||||||    
T  49091758 tcttgtaactcttttgtaacactttcatcatagtggattggagagttgctctcttccccagattaggtcatattggactaaactgggtcaacaatcttg 49091660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 9190041 - 9190106
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||||||||||||||||||||||| |||| || ||||| | ||||||||||||||||||||    
T  9190041 tggattggagagctgctctctcccccagactaggtcatattggaccgaactgggtcaacaatcttg 9190106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 91 - 155
Target Start/End: Complemental strand, 20284153 - 20284088
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||| ||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  20284153 tggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 20284088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 44848685 - 44848781
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaatctt 154  Q
    |||||||||  |||||||||||| || |||| |||||||||||||||||||||||||||| ||||| || ||||  | |||||||||||||||||||    
T  44848685 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccaggttaggtcatattgaaccgaactgggtcaacaatctt 44848781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 2647696 - 2647794
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacatt-ggctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| |||||||||| |||||||||||||||||| |||| || ||| ||| ||| ||||||||||||||||    
T  2647696 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagaataggtcatattgggccgaattgggtcaacaatcttg 2647794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 33332450 - 33332548
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggct-gaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || | || |||||||||| ||||||||||||||||||||||| || ||| | | ||||||||||||||||||||    
T  33332450 tcttgtaactcttttgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattagatcgaactgggtcaacaatcttg 33332548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 155
Target Start/End: Complemental strand, 2580454 - 2580389
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||||||||||||||||||||||| |||| || ||||| | ||| ||||||||||||||||    
T  2580454 tggattggagagctgctctctcccccagactaggtcatattggaccgaattgggtcaacaatcttg 2580389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 56044 - 55947
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| |||||||||| |||||||||| |||||||||||| || ||||| | |||||||||||| |||||||    
T  56044 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagattaggtcatattggaccgaactgggtcaataatcttg 55947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 9185198 - 9185263
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||||||| |||||||||||||| ||||  | ||||| | ||||||||||||||||||||    
T  9185198 tggattggagagcttctctctcccccagactaggttatattggaccgaactgggtcaacaatcttg 9185263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 28617258 - 28617319
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaat 151  Q
    ||||||||||||||||||||||||||||| |||| || ||||| | ||||||||| ||||||    
T  28617258 tggattggagagctgctctctcccccagagtaggtcatattggaccgaactgggtaaacaat 28617319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 31155971 - 31155911
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  31155971 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31155911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 155
Target Start/End: Complemental strand, 35960885 - 35960815
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaatcttg 155  Q
    |||| ||| |||||| ||||||||||||||||||||||| || ||||  | ||||| ||||||||||||||    
T  35960885 catagtggtttggagggctgctctctcccccagattaggtcatattgaaccgaactcggtcaacaatcttg 35960815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 47263745 - 47263678
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||| ||||||||||||||||  ||||||||| |||||| || ||||| | |||||||||||||||||||    
T  47263745 catagtggattggagagctgc--tctcccccatattaggtcatattggaccgaactgggtcaacaatctt 47263678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 1049356 - 1049296
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  1049356 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 1049296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 2935497 - 2935557
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  2935497 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 2935557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 3035953 - 3036013
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  3035953 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 3036013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 7351712 - 7351652
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  7351712 tggattggagggctgctctctcccccatactaggtcagattggaccgaactgggtcaacaa 7351652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 8153466 - 8153514
Alignment:
Q  107 tctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  8153466 tctctcccccagattaggtcaagttggactgaactgggtcaacaatctt 8153514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 9027254 - 9027194
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  9027254 tggataggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 9027194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 22108295 - 22108355
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  22108295 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 22108355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 22137306 - 22137366
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  22137306 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 22137366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 40550055 - 40550115
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  40550055 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 40550115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 40552333 - 40552393
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  40552333 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 40552393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 244; Significance: 1e-135; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 11 - 285
Target Start/End: Complemental strand, 6438645 - 6438370
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacacttcacatattggattggagagctgctctc 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6438645 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacacttcacatattggattggagagctgctctc 6438546  T
Q  111 tcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgtaagctc- 209  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  6438545 tcccccagattaggccatattggctgaactgggacaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgttagctct 6438446  T
Q  210 ttgtgaggttttgctatacactagcttagggctgtttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  6438445 ttgtgtggttttgctatacactagcttagggctgtttgttgttgtttgcttggaagccattggttctcattgatta 6438370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 11 - 289
Target Start/End: Original strand, 28155510 - 28155790
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctct 109  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  28155510 caaagggtagatctagggtttgttcatgtgtaaagcttga-aagctaaattcttgtaaccttttgtaacactttctcatattggattggagagctgctct 28155608  T
Q  110 ctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgtaagctc 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  28155609 ctcccccagattaggccacattggctgaactgggtcaacaatcttgttcggtgttttgttctttccatttaccgtttatcttgtttatgcttgttagctc 28155708  T
Q  210 tt-gtgaggttttgctatacactag-cttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatcac 289  Q
    || ||| ||||||||||||||| || | || ||||| |||||||||||||||||| |  ||||||| ||||||||||||||||    
T  28155709 ttagtgtggttttgctatacacaagtcata-ggctgttttgttgttgttagcttgaagaccatttgctctcattgattatcac 28155790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 11 - 287
Target Start/End: Complemental strand, 6005563 - 6005285
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 108  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  6005563 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 6005464  T
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcttt-ccttttaccgtttatcttgtttatgcttgtaagc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||  ||||||||| |||    
T  6005463 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttt-gttcttttccttttatcgtttatcttg--tatgcttgttagc 6005367  T
Q  208 tctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    |||| ||| |||||||||||||| || ||||| ||||| |||||||||||||||||||| ||||||||  ||||| |||||||    
T  6005366 tcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttgcactcatagattatc 6005285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 22 - 289
Target Start/End: Complemental strand, 28184638 - 28184368
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagat 120  Q
    ||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  28184638 tctagggtttgttcatgtgtaaagcttga-aggctagagtgttgtaaccttttgtaacactttctcatattagattggagagctgctctctcccccagat 28184540  T
Q  121 taggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctcttgtgaggtt 219  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| ||| || |||||||| ||||    
T  28184539 taggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctttctttttaccgcttatcttgtttatgctttggaatctcttgtgtggtt 28184441  T
Q  220 ttgctatacactagcttagggctg-tttgttgttgttagcttggaagcca--tttgttctcattgattatcac 289  Q
    ||||||||||||||  |||||||| |||||||||||| |||||||  |||  |||||||||||||||||||||    
T  28184440 ttgctatacactagtctagggctgttttgttgttgtttgcttggagaccatttttgttctcattgattatcac 28184368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 11 - 287
Target Start/End: Complemental strand, 16838890 - 16838612
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 108  Q
    |||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  16838890 caaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 16838791  T
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttccttttaccgtttatcttgtttatgcttgtaagc 207  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||  ||||||||| |||    
T  16838790 tctcccccagattaagccacattggctgaactgggtcaacaatcttgctcggtgttt-gttcgttttcttttatcgtttatcttg--tatgcttgttagc 16838694  T
Q  208 tctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    |||| ||| |||||||||||||| || ||||| ||||| |||||||||||||||||| | ||||||||  ||||| |||||||    
T  16838693 tcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttgaaggccatttgcactcatagattatc 16838612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 22 - 289
Target Start/End: Original strand, 14737528 - 14737796
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagat 120  Q
    |||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  14737528 tctagggtttgttcatatgtaaagcttga-aggctagagtcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagat 14737626  T
Q  121 taggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgctt--gta-agctcttgtgagg 217  Q
    ||||||| |||||||||||||| ||||||||||| |||||||||||||||||| ||||||||| ||||||||||| |||||  |||   || ||||| ||    
T  14737627 taggccatattggctgaactggatcaacaatctt-ctcggtgttttgttcttt-cttttaccgcttatcttgttt-tgctttggtatctcttttgtgtgg 14737723  T
Q  218 ttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatcac 289  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||  ||||||||||||||||||||||||    
T  14737724 ttttgctatacactagtctagggctgttttgttgttgtttgcttggagaccatttgttctcattgattatcac 14737796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 22 - 289
Target Start/End: Original strand, 14742388 - 14742655
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagat 120  Q
    |||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||    
T  14742388 tctagggtttgttcatatgtaaagcttga-aggctagagtcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccaaat 14742486  T
Q  121 taggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgaggt 218  Q
    |||| || |||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||| |||  | ||| ||||| |||    
T  14742487 taggtcatattggctgaactgggtcaacaatctt-ctcggtgttttgttcttt-cttttaccgcttatcttgttt-tgctttgatatctctttgtgtggt 14742583  T
Q  219 tttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatcac 289  Q
    |||||||||||||||  |||||||| |||||||||||  |||||||  ||||||||||||||||||||||||    
T  14742584 tttgctatacactagtctagggctgttttgttgttgtatgcttggagaccatttgttctcattgattatcac 14742655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 287
Target Start/End: Original strand, 33330384 - 33330664
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 108  Q
    |||||||||| ||||||||||  ||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  33330384 caaagggtagatctagggttttgtcatgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 33330483  T
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttcctttt-accgtttatcttgtttatgcttgtaagc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||| |  |||||||||| |||||||||| |||    
T  33330484 tctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtg-tttgttcttttcttttcatggtttatcttg-ttatgcttgttagc 33330581  T
Q  208 tctt-gtgagg-ttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    |||| ||| || |||||||||||| || ||||| ||||| |||||||||||||||||||| ||||||||  ||||| |||||||    
T  33330582 tcttagtgtggtttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttgcactcatagattatc 33330664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 22 - 285
Target Start/End: Original strand, 22010648 - 22010912
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccaga 119  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  22010648 tctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccaga 22010746  T
Q  120 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgagg 217  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||| ||| |||  | ||| ||||| ||    
T  22010747 ttaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc-ttccttttatcgcttatcttgttt-tgctttggtatctctttgtgtgg 22010843  T
Q  218 ttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    |||||||||||||| |  |||||| | |||||||||||| |||||||  ||||||||||||||||||||    
T  22010844 ttttgctatacacttgtctagggcggctttgttgttgtttgcttggagaccatttgttctcattgatta 22010912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 11 - 287
Target Start/End: Original strand, 33335881 - 33336161
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 108  Q
    |||||||||| ||||||||||  ||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  33335881 caaagggtagatctagggttttgtcatgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 33335980  T
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttcctttt-accgtttatcttgtttatgcttgtaagc 207  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||| ||||| |  |||||||||| |||||||||| |||    
T  33335981 tctcccccagattaggtcacattggctgaactgggtcaacaatcttgcttggtg-tttgttcttttcttttcatggtttatcttg-ttatgcttgttagc 33336078  T
Q  208 tctt-gtgagg-ttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    |||| ||| || |||| ||||||| || ||||| ||||| |||||||||||||| ||||| ||||||||  ||||| |||||||    
T  33336079 tcttagtgtggtttttactatacattaggctta-ggctgttttgttgttgttagtttggaggccatttgcactcatagattatc 33336161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 285
Target Start/End: Complemental strand, 11857108 - 11856841
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccaga 119  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |    
T  11857108 tctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccata 11857010  T
Q  120 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttct--ttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtga 215  Q
    |||||||| |||||||||||||||||||||||||| || |||||||| || |  ||||||||| || || |||||||| ||| |||  | ||| |||||     
T  11857009 ttaggccatattggctgaactgggtcaacaatctt-cttggtgtttttttgttcttccttttatcgcttgtcttgttt-tgctttggtatctctttgtgt 11856912  T
Q  216 ggttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||||||||||||||||  |||||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  11856911 ggttttgctatacactagtctagggctgttttgttgttgtttgcttggagaccatttgttctcattgatta 11856841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 153
Target Start/End: Original strand, 5674771 - 5674865
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatct 153  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5674771 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatct 5674865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 109 - 287
Target Start/End: Complemental strand, 5343527 - 5343348
Alignment:
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttccttttaccgtttatcttgtttatgcttgtaagc 207  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| | |||| |||||||||||  ||||||||| |||    
T  5343527 tctcccctagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcgttttcctttatcgtttatcttg--tatgcttgttagc 5343431  T
Q  208 tctt-gtgagg-ttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    |||| ||| || |||||||||||  || ||||| ||||| |||||||||||||||||||| ||||||||  ||||| |||||||    
T  5343430 tcttagtgtggtttttgctatactttaggctta-ggctgttttgttgttgttagcttggaggccatttgcactcatagattatc 5343348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 5757479 - 5757575
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||  |||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  5757479 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 5757575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 21356105 - 21356036
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||| ||||||||||||||||||||||| |||||||||| || ||||| | |||||||||||||||||||    
T  21356105 catagtggattggagagctgctctctcctccagattaggtcatattggaccgaactgggtcaacaatctt 21356036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 155
Target Start/End: Original strand, 10077176 - 10077263
Alignment:
Q  71 ttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||||||| || |||| |||||||||| ||||||||||||||||||||||| || ||||| | ||| ||||||||||||||||    
T  10077176 ttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaattgggtcaacaatcttg 10077263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 5572241 - 5572339
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| |||||||||| |||||||||||||| |||||||| || ||||| | ||| ||||||||||||||||    
T  5572241 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattggaccgaattgggtcaacaatcttg 5572339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 155
Target Start/End: Original strand, 31086501 - 31086571
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||| |||||||||||| |||||||||||| |||||||  || ||||| ||||||||||||||||||||||    
T  31086501 catagtggattggagagttgctctctcccctagattagatcatattggactgaactgggtcaacaatcttg 31086571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 155
Target Start/End: Complemental strand, 31979577 - 31979512
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||| ||||||||||||||||||||| | || ||||| | ||||||||||||||||||||    
T  31979577 tggattggagggctgctctctcccccagattatgtcatattggaccgaactgggtcaacaatcttg 31979512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 4630018 - 4629954
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    ||||||||||||||||||||| ||| |||||||| || ||||| |||||||| ||||||||||||    
T  4630018 tggattggagagctgctctcttccctagattaggtcatattggactgaactgagtcaacaatctt 4629954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 22709087 - 22709050
Alignment:
Q  86 catattggattggagagctgctctctcccccagattag 123  Q
    |||| |||||||||||||||||||||||||||||||||    
T  22709087 catagtggattggagagctgctctctcccccagattag 22709050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 155
Target Start/End: Complemental strand, 31936651 - 31936586
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||||||||||||||| |||||| |||| || ||||| | ||||| ||||||||||||||    
T  31936651 tggattggagagctgctctctctcccagactaggtcatattggaccgaactaggtcaacaatcttg 31936586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 12195575 - 12195515
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  12195575 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 12195515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 21801377 - 21801429
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgg 142  Q
    |||||||||||||||||| ||||||||||||||| || ||||| |||||||||    
T  21801377 tggattggagagctgctcgctcccccagattaggtcatattggactgaactgg 21801429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 22963796 - 22963699
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| |||||||||| |||||||||| ||||||||| || || ||||  | ||||||||||||||||||||    
T  22963796 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagatttggtcatattgcaccgaactgggtcaacaatcttg 22963699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 23824597 - 23824694
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| |||||||||| |||||||||| ||||||||| || || ||||  | ||||||||||||||||||||    
T  23824597 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagatttggtcatattgcaccgaactgggtcaacaatcttg 23824694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 4816291 - 4816231
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  4816291 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 4816231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 5273276 - 5273216
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  5273276 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 5273216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 19704627 - 19704567
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  19704627 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 19704567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 20915416 - 20915356
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  20915416 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 20915356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 26932622 - 26932562
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| | |||||||||||||||| |||| || ||||| | |||||||||||||||    
T  26932622 tggattggagggttgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 26932562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 29754769 - 29754709
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  29754769 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 29754709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 33309110 - 33309170
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  33309110 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 33309170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 232; Significance: 1e-128; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 11 - 289
Target Start/End: Original strand, 28807514 - 28807794
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacacttcacatattggattggagagctgctctc 110  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28807514 caaagggtagatctagggtttgttcatgtgtaaagcttga-aagctagattcttgtaaccttttgtaacacttcacatattggattggagagctgctctc 28807612  T
Q  111 tcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgtaagctct 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28807613 tcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgttagctct 28807712  T
Q  211 t---gtgaggttttgctatacactagcttagggctgtttgttgttgttagcttggaagccatttgttctcattgattatcac 289  Q
    |   |||   |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28807713 ttgagtggttttttgctatacactagcttagggctgtttgttgttgtttgcttggaagccatttgttctcattgattatcac 28807794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 11 - 289
Target Start/End: Original strand, 37556562 - 37556843
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctct 109  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  37556562 caaagggtagttctagggtttgttcatgtgtaaagcttgataagctagatacttgtaaccttttgtaacactttcacatattggattggagagctgctct 37556661  T
Q  110 ctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgtaagctc 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  37556662 ctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccatttaccgtttatcttgtttatgcttgttagctc 37556761  T
Q  210 tt-gtgaggttttgctatacactag-cttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatcac 289  Q
    || ||| ||||||||||||||| || | || ||||| |||||||||||||||||||| |||||||| |||||| |||||||||    
T  37556762 ttagtgtggttttgctatacacaagtcata-ggctgttttgttgttgttagcttggaggccatttgctctcatagattatcac 37556843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 11 - 289
Target Start/End: Original strand, 37561384 - 37561665
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctct 109  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  37561384 caaagggtagttctagggtttgttcatgtgtaaagcttgataagctagatacttgtaaccttttgtaacactttcacatattggattggagagctgctct 37561483  T
Q  110 ctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgtaagctc 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  37561484 ctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccatttaccgtttatcttgtttatgcttgttagctc 37561583  T
Q  210 tt-gtgaggttttgctatacactag-cttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatcac 289  Q
    || ||| ||||||||||||||| || | || ||||| |||||||||||||||||||| |||||||| |||||| |||||||||    
T  37561584 ttagtgtggttttgctatacacaagtcata-ggctgttttgttgttgttagcttggaggccatttgctctcatagattatcac 37561665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 11 - 287
Target Start/End: Complemental strand, 2785521 - 2785243
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 108  Q
    |||||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  2785521 caaagggtaggtctagggtttgttcatgagtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 2785422  T
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcttt-ccttttaccgtttatcttgtttatgcttgtaagc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||  ||||||||| |||    
T  2785421 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttt-gttcttttccttttatcgtttatcttg--tatgcttgttagc 2785325  T
Q  208 tctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    |||| ||| |||||||||||||| || ||||| ||||| |||||||||||||||||||| ||||||||  ||||| |||||||    
T  2785324 tcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttgcactcatagattatc 2785243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 11 - 287
Target Start/End: Complemental strand, 33791462 - 33791184
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 108  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  33791462 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 33791363  T
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcttt-ccttttaccgtttatcttgtttatgcttgtaagc 207  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||  ||||||||| |||    
T  33791362 tttcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttt-gttcttttccttttatcgtttatcttg--tatgcttgttagc 33791266  T
Q  208 tct-tgtgaggttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    ||| | || |||||||||||||| || ||||| ||||| |||||||||||||||||||| ||||||||  ||||| |||||||    
T  33791265 tctatatgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttgcactcatagattatc 33791184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 22 - 285
Target Start/End: Complemental strand, 15044819 - 15044556
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagat 120  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||    
T  15044819 tctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccatat 15044721  T
Q  121 taggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctcttgtgaggtt 219  Q
    ||||||| |||||||||||||||||||||||||| || |||||||||||| ||||||||   | ||||||||||||||| ||| || |||||||| ||||    
T  15044720 taggccatattggctgaactgggtcaacaatctt-cttggtgttttgttc-ttccttttcttgcttatcttgtttatgctttggaatctcttgtgtggtt 15044623  T
Q  220 ttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||||||||||||  |||||||| |||||||||||| | |||||  ||||||||||||||||||||    
T  15044622 ttgctatacactagtctagggctgttttgttgttgttggtttggagaccatttgttctcattgatta 15044556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 22 - 285
Target Start/End: Complemental strand, 43592413 - 43592148
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccaga 119  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  43592413 tctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccaga 43592315  T
Q  120 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgagg 217  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||| |  ||||||||||||||| |||| | ||| ||||| ||    
T  43592314 ttaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc-ttccttttatcacttatcttgtttatgctttgttatctctttgtgtgg 43592217  T
Q  218 ttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  43592216 ttttgctatacactagtctagggctgctttgttgttgtttgcttggagaccatttgttctcattgatta 43592148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 12 - 287
Target Start/End: Complemental strand, 33768324 - 33768047
Alignment:
Q  12 aaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctct 109  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  33768324 aaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctct 33768225  T
Q  110 ctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttccttttaccgtttatcttgtttatgcttgtaagct 208  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||| ||  ||||||||| ||||    
T  33768224 cccccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttccttttatcgtttatcctg--tatgcttgttagct 33768128  T
Q  209 ct-tgtgaggttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    || | || |||||||||||||| || ||||| ||||| |||||||||||||||||||| | ||||||  ||||| |||||||    
T  33768127 ctatatgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggtcatttgcactcatagattatc 33768047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 22 - 285
Target Start/End: Original strand, 1457113 - 1457377
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccaga 119  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  1457113 tctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccaga 1457211  T
Q  120 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgagg 217  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || |  |  ||||||||||||||| |||| | ||| ||||| ||    
T  1457212 ttaggccacattggctgaactgggtcaacaatctt-ctcggtgttttgttcttcctttctttc--ttatcttgtttatgctttgttatctctttgtgtgg 1457308  T
Q  218 ttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  1457309 ttttgctatacactagtctagggctgctttgttgttgtttgcttggagaccatttgttctcattgatta 1457377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 11 - 287
Target Start/End: Original strand, 31396930 - 31397210
Alignment:
Q  11 caaagggtagttctagggtttgtt--catgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgc 106  Q
    |||||||||| |||||||||| ||  | |||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  31396930 caaagggtagatctagggttttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgc 31397029  T
Q  107 tctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgtaag 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||| |||||| |||||||||||  ||||||||| ||    
T  31397030 tctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgtttgttttcttttatcgtttatcttg--tatgcttgttag 31397127  T
Q  207 ctctt-gtgaggttttgctatacacta-gcttagggctgtttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    ||||| ||| ||||||||| |||| || |||||||    |||||||||||||||||||| ||||||||  ||||| |||||||    
T  31397128 ctcttagtgtggttttgctttacattaggcttaggatgttttgttgttgttagcttggaggccatttgcactcatagattatc 31397210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 22 - 285
Target Start/End: Complemental strand, 27449948 - 27449683
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccaga 119  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  27449948 tctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccaga 27449850  T
Q  120 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgagg 217  Q
    |||||| | |||||||||||||||||||||||||| ||||||||||||||| ||||||||| |  ||||||||||||||| |||| | ||| ||||| ||    
T  27449849 ttaggctatattggctgaactgggtcaacaatctt-ctcggtgttttgttc-ttccttttatcacttatcttgtttatgctttgttatctctttgtgtgg 27449752  T
Q  218 ttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||||||||||||||  |||||||| | |||||||||| |||||||  |||||||| |||||||||||    
T  27449751 ttttgctatacactagtctagggctgctatgttgttgtttgcttggagaccatttgtactcattgatta 27449683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 22 - 285
Target Start/End: Complemental strand, 43598858 - 43598593
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccaga 119  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  43598858 tctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccaga 43598760  T
Q  120 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgagg 217  Q
    |||||||| ||||||||||||||  |||||||||| ||||||||||||||| ||||||||| |  ||||||||||||||| |||| | ||| ||||| ||    
T  43598759 ttaggccatattggctgaactggaccaacaatctt-ctcggtgttttgttc-ttccttttatcacttatcttgtttatgctttgttatctctttgtgtgg 43598662  T
Q  218 ttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||  ||| ||||||||||||||||    
T  43598661 ttttgctatacactagtctagggctgctttgttgttgtttgcttggagaccaattgttctcattgatta 43598593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 22 - 285
Target Start/End: Complemental strand, 43604350 - 43604085
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccaga 119  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  43604350 tctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccaga 43604252  T
Q  120 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgagg 217  Q
    |||||||| ||||||||||||||  |||||||||| ||||||||||||||| ||||||||| |  ||||||||||||||| |||| | ||| ||||| ||    
T  43604251 ttaggccatattggctgaactggaccaacaatctt-ctcggtgttttgttc-ttccttttatcacttatcttgtttatgctttgttatctctttgtgtgg 43604154  T
Q  218 ttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||  ||| ||||||||||||||||    
T  43604153 ttttgctatacactagtctagggctgctttgttgttgtttgcttggagaccaattgttctcattgatta 43604085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 22 - 285
Target Start/End: Complemental strand, 43609842 - 43609577
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccaga 119  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  43609842 tctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccaga 43609744  T
Q  120 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgagg 217  Q
    |||||||| ||||||||||||||  |||||||||| ||||||||||||||| ||||||||| |  ||||||||||||||| |||| | ||| ||||| ||    
T  43609743 ttaggccatattggctgaactggaccaacaatctt-ctcggtgttttgttc-ttccttttatcacttatcttgtttatgctttgttatctctttgtgtgg 43609646  T
Q  218 ttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||  ||| ||||||||||||||||    
T  43609645 ttttgctatacactagtctagggctgctttgttgttgtttgcttggagaccaattgttctcattgatta 43609577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 22 - 285
Target Start/End: Complemental strand, 27445104 - 27444839
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccaga 119  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  27445104 tctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccaga 27445006  T
Q  120 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgagg 217  Q
    |||||| | |||| ||||||||||||||||||||| ||||||||||||||| ||||||||| |  ||||||||||||||| |||| | ||| ||||| ||    
T  27445005 ttaggctatattgcctgaactgggtcaacaatctt-ctcggtgttttgttc-ttccttttatcacttatcttgtttatgctttgttatctctttgtgtgg 27444908  T
Q  218 ttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||||||||||||||  |||||||| | |||||||||| |||||||  |||||||| |||||||||||    
T  27444907 ttttgctatacactagtctagggctgctatgttgttgtttgcttggagaccatttgtactcattgatta 27444839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 11 - 287
Target Start/End: Original strand, 31401787 - 31402067
Alignment:
Q  11 caaagggtagttctagggtttgtt--catgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgc 106  Q
    |||||||||| ||||| |||| ||  | |||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  31401787 caaagggtagatctagagttttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgc 31401886  T
Q  107 tctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttccttttaccgtttatcttgtttatgcttgtaa 205  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||||||||  ||||||||| |    
T  31401887 tctctcccccatattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcgttttcttttatcgtttatcttg--tatgcttgtta 31401983  T
Q  206 gctctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    |||||| ||| ||||||||| |||| || ||||| ||||| |||||||||||||||||||| ||||||||  ||||| |||||||    
T  31401984 gctcttagtgtggttttgctttacattaggctta-ggctgttttgttgttgttagcttggaggccatttgcactcatagattatc 31402067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 22 - 285
Target Start/End: Complemental strand, 30631541 - 30631277
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt--cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccag 118  Q
    |||| |||||||||||||||||||||||| | ||||||||  ||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||    
T  30631541 tctatggtttgttcatgtgtaaagcttga-aggctagagtttcttgtaaccctttgtaacactttctcatattggattggagagctgctctctcccccag 30631443  T
Q  119 attaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttcctt-ttaccgtttatcttgtttatgc-ttgtaagctct-tgtga 215  Q
    ||||||||||||||||||||||| |||||||||||| || |||||||||||||| | || ||||   ||||||||||||||| |||| | || | | ||     
T  30631442 attaggccacattggctgaactgagtcaacaatctt-cttggtgttttgttcttcctttcttac---ttatcttgtttatgctttgttatctatatatgt 30631347  T
Q  216 ggttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    | ||||||||||||||||  |||||||| |||||||||||| ||||| || |||||||||||||| |||||    
T  30631346 gattttgctatacactagtctagggctgttttgttgttgtt-gcttgaaaaccatttgttctcatagatta 30631277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 31180348 - 31180138
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt--cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccag 118  Q
    |||||||||||| | |||||||||||||| | ||||||||  ||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||    
T  31180348 tctagggtttgt-cttgtgtaaagcttga-aggctagagtttcttgtaaccctttgtaacactttctcatattggattggagagctgctctctcccccag 31180251  T
Q  119 attaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgag 216  Q
    ||||||||| |||||||||||||||||||||||||| || |||||||||||||||| || |  |  ||||||||||||||| |||| | ||| ||||| |    
T  31180250 attaggccatattggctgaactgggtcaacaatctt-cttggtgttttgttctttctttctttc--ttatcttgtttatgctttgttatctctttgtgtg 31180154  T
Q  217 gttttgctatacacta 232  Q
    ||||||||||||||||    
T  31180153 gttttgctatacacta 31180138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 38192269 - 38192174
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  38192269 tcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 38192174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 38219494 - 38219399
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  38219494 tcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 38219399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 35387758 - 35387663
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || |||| | ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  35387758 tcttgtaaccctttgtaacactttcatcatagtagattggagagctgctctctcccccagattaggccatattggctgaattgggtcaacaatctt 35387663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 24135944 - 24135849
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || | || || |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24135944 tcttgtaaccctttgtaacactttcatcttagtgcattggatagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 24135849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 9353333 - 9353429
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||  |||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  9353333 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 9353429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 36932351 - 36932447
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||  |||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  36932351 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 36932447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 10281848 - 10281751
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    ||||||||| |||||||||||||| || |||| |||||||||||||||||||||||||||||| ||| || ||||| | |||||||||||||||||||    
T  10281848 tcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagatcaggtcatattggaccgaactgggtcaacaatctt 10281751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 15464628 - 15464532
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||  |||||||||||| || |||| |||||||||||||||||||||||||||||||||  || ||||| | |||||||||||||||||||    
T  15464628 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattagatcatattggaccgaactgggtcaacaatctt 15464532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 155
Target Start/End: Original strand, 17003988 - 17004058
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||| ||||||| |||||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  17003988 catagtggattgaagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 17004058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 153
Target Start/End: Original strand, 11916972 - 11917068
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-cac-atattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatct 153  Q
    ||||||||| |||||||||||||| ||  ||| ||||||||||||||||||||||||||| |||||| || ||||| | ||||||||||||||||||    
T  11916972 tcttgtaactcttttgtaacactttcattatagtggattggagagctgctctctcccccatattaggtcatattggaccgaactgggtcaacaatct 11917068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 155
Target Start/End: Complemental strand, 28832323 - 28832258
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||| ||||||||||||||||||||||| || ||||| | |||| |||||||||||||||    
T  28832323 tggattggagggctgctctctcccccagattaggtcatattggaccgaaccgggtcaacaatcttg 28832258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 4410241 - 4410301
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    ||||||||||||||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  4410241 tggattggagagctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 4410301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 14520326 - 14520230
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||  |||||||||||| || |||| ||||||| |||||||||||| |||| |||||||| || ||||| | |||||||||||||||||||    
T  14520326 tcttgtaactctttgtaacactttcatcatagtggattgaagagctgctctcccccctagattaggtcatattggaccgaactgggtcaacaatctt 14520230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 3880396 - 3880298
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| ||||||||||||||||||||| || ||||||||| || ||||| | ||||||  ||||||||||||    
T  3880396 tcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctgcctcagattaggtcatattggacagaactgaatcaacaatcttg 3880298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 151
Target Start/End: Original strand, 12084176 - 12084269
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaat 151  Q
    |||||||||  |||||||||||| || |||| ||||||||||||||||||||| ||||| |||||| || | ||| | ||||||||||||||||    
T  12084176 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctgccccatattaggtcatagtggaccgaactgggtcaacaat 12084269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 19588843 - 19588746
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    ||||||||| |||||||||||||| || |||| |||||||||| |||||||||||||  |||||||  || ||||| | |||||||||||||||||||    
T  19588843 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccctaagattagttcatattggaccgaactgggtcaacaatctt 19588746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 42127443 - 42127508
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattggct-gaactgggtcaacaatcttg 155  Q
    |||||||| | ||||||||||||||||||||||| || ||| | | ||||||||||||||||||||    
T  42127443 tggattggggggctgctctctcccccagattaggtcatattagatcgaactgggtcaacaatcttg 42127508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 15552464 - 15552524
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  15552464 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 15552524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 31179431 - 31179371
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  31179431 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31179371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 31542953 - 31543013
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  31542953 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31543013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 31545299 - 31545359
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  31545299 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31545359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 27910675 - 27910729
Alignment:
Q  97 ggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||||||||||||||||||||| ||  |||| | |||||||||||||||    
T  27910675 ggagagctgctctctcccccagattaggtcaatttggaccgaactgggtcaacaa 27910729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 31300629 - 31300694
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||||| | ||||||||| |||| |||| || ||||| | ||||||||||||||||||||    
T  31300629 tggattggagagtttctctctccctcagactaggtcatattggaccgaactgggtcaacaatcttg 31300694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 3373197 - 3373137
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| | |||||||||||||||| |||| || ||||| | |||||||||||||||    
T  3373197 tggattggagggttgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 3373137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 10749919 - 10749979
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  10749919 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 10749979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 15354635 - 15354575
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  15354635 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 15354575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 221; Significance: 1e-121; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 11 - 289
Target Start/End: Original strand, 39784763 - 39785043
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacacttcacatattggattggagagctgctctc 110  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39784763 caaagggtagttctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaaccttttgtaacacttcacatattggattggagagctgctctc 39784862  T
Q  111 tcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc 209  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||| || |||    
T  39784863 tcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgcttatcttgtttgtgctttggaatctc 39784962  T
Q  210 ttgtgaggttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatcac 289  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| || |||||||  ||||||||||||||||||||||||    
T  39784963 ttgtgtggttttgctatacactagcttagggctgttttgttgttattggcttggagaccatttgttctcattgattatcac 39785043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 11 - 287
Target Start/End: Complemental strand, 35745537 - 35745259
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 108  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  35745537 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 35745438  T
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcttt-ccttttaccgtttatcttgtttatgcttgtaagc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||  ||||||||| |||    
T  35745437 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttt-gttcttttccttttatcgtttatcttg--tatgcttgttagc 35745341  T
Q  208 tctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    |||| ||| |||||||||||||| || ||||| ||||| |||||||||||||||||||| ||||||||  ||||| |||||||    
T  35745340 tcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttgcactcatagattatc 35745259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 22 - 289
Target Start/End: Original strand, 25328230 - 25328497
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagat 120  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  25328230 tctagggtttgttcatgtgtaaagcttga-aggctagagtcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagat 25328328  T
Q  121 taggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatg-cttgtaagctcttgtgaggtt 219  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| |||||||  |||  | |||||||| ||||    
T  25328329 taggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttcttttcctttaccgtttatctcgtttatgttttggtatctcttgtgtggtt 25328427  T
Q  220 ttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatcac 289  Q
    |||||||||||||| |||||| || |||||||||||| |||||||  ||||||||||||||||||||||||    
T  25328428 ttgctatacactag-ttagggttgttttgttgttgttggcttggagaccatttgttctcattgattatcac 25328497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 24 - 285
Target Start/End: Original strand, 7289879 - 7290142
Alignment:
Q  24 tagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagatt 121  Q
    ||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  7289879 tagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagatt 7289977  T
Q  122 aggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttat-gcttgtaagctc-ttgtgaggtt 219  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||| |  ||||||||||||| | |||| | ||| ||||| ||||    
T  7289978 aggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc-ttccttttatcacttatcttgtttatggtttgttatctctttgtgtggtt 7290075  T
Q  220 ttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||||||||||||  |||||||| |||||||||||| | |||||  ||||||||||||||||||||    
T  7290076 ttgctatacactagtctagggctgctttgttgttgtttgtttggagaccatttgttctcattgatta 7290142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 11 - 285
Target Start/End: Original strand, 10684203 - 10684480
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 108  Q
    |||||||||| ||||||||||  || |||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  10684203 caaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 10684302  T
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttccttttaccgtttatcttgtttatgcttgtaagc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||| |||||||||||  ||||||||| |||    
T  10684303 tctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcttttatcgtttatcttg--tatgcttgttagc 10684400  T
Q  208 tctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttg-ttagcttggaagccatttgttctcattgatta 285  Q
    |||| ||| || |||||| |||| || ||||| ||||| |||||||||| |||||||||| ||||||||  ||||| |||||    
T  10684401 tcttagtgtggatttgct-tacattaggctta-ggctgttttgttgttgattagcttggaggccatttgcactcatagatta 10684480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 22 - 285
Target Start/End: Complemental strand, 6311431 - 6311167
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt--cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccag 118  Q
    |||||||||||| | |||||||||||||| | ||||||||  |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  6311431 tctagggtttgt-cttgtgtaaagcttga-aggctagagtttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccag 6311334  T
Q  119 attaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctctt-gtgag 216  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||  | |||   | ||||||||||||||| |||| | ||||| ||| |    
T  6311333 attaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt--cctttcttgcttatcttgtttatgctttgttatctcttagtgtg 6311237  T
Q  217 gttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    |||||||||||||||||  |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  6311236 gttttgctatacactagtctagggctgctttgttgttgtttgcttggaaaccatttgttctcattgatta 6311167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 61 - 255
Target Start/End: Original strand, 33037808 - 33038001
Alignment:
Q  61 tcttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcg 159  Q
    |||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |    
T  33037808 tcttgtaaccctttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-cttg 33037906  T
Q  160 gtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgaggttttgctatacactagcttagggctgtttgttgttgtt 255  Q
    |||||||||||||  |||||   | ||||||||||| ||| |||  | ||| ||||| ||||||||| ||||||||  ||||||||||| ||||||||    
T  33037907 gtgttttgttctt--cttttcttgcttatcttgttt-tgctttggtatctctttgtgtggttttgctctacactagtctagggctgtttattgttgtt 33038001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 61 - 285
Target Start/End: Original strand, 4760076 - 4760301
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctc 158  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||     
T  4760076 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaatctt-ctt 4760174  T
Q  159 ggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgaggttttgctatacactagcttagggctg--tttgttgttgt 254  Q
    | ||||||||||||  | |||   | ||||||||||||||| |||| | ||| ||||| ||||||||| ||||||||  ||||||||  |||||||||||    
T  4760175 gatgttttgttctt--cctttcttgcttatcttgtttatgctttgttatctctttgtgtggttttgctctacactagtctagggctgtttttgttgttgt 4760272  T
Q  255 tagcttggaagccatttgttctcattgatta 285  Q
    | |||||||| |||||| | |||||||||||    
T  4760273 t-gcttggaaaccattt-tgctcattgatta 4760301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 172
Target Start/End: Complemental strand, 36979473 - 36979361
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctc 158  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     
T  36979473 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctt 36979375  T
Q  159 ggtgttttgttctt 172  Q
    ||||||||||||||    
T  36979374 ggtgttttgttctt 36979361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 10689144 - 10689256
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctc 158  Q
    |||||||||| | |||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     
T  10689144 tcttgtaaccctctgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctt 10689242  T
Q  159 ggtgttttgttctt 172  Q
    ||||||||||||||    
T  10689243 ggtgttttgttctt 10689256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 61 - 255
Target Start/End: Complemental strand, 30655742 - 30655543
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctc 158  Q
    |||||||||| |||||||||||| || |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     
T  30655742 tcttgtaaccctttgtaacactttcatcatattagattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctt 30655644  T
Q  159 ggtgttttgttctttc--cttttaccgtttatcttgtttatgc-ttgtaagctct-tgtgaggttttgctatacactagcttagggctgtttgttgttgt 254  Q
    |||||||| ||  |||  | |||   | ||||||||||||||| |||| | |||| |||| ||||||||| ||||||||  ||||||||||| |||||||    
T  30655643 ggtgttttttttgttcttcctttcttgcttatcttgtttatgctttgttatctctatgtgtggttttgctctacactagtctagggctgttttttgttgt 30655544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 18853168 - 18853281
Alignment:
Q  61 tcttgtaacc-ttttgtaacactt-cac-atattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgct 157  Q
    |||||||||| ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  18853168 tcttgtaacccttttgtaacactttcattatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ct 18853266  T
Q  158 cggtgttttgttctt 172  Q
     ||||||||||||||    
T  18853267 tggtgttttgttctt 18853281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 18870562 - 18870675
Alignment:
Q  61 tcttgtaacc-ttttgtaacactt-cac-atattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgct 157  Q
    |||||||||| ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||    
T  18870562 tcttgtaacccttttgtaacactttcattatattggattggagagctgctctctcccccagattaggccatattggatgaactgggtcaacaatctt-ct 18870660  T
Q  158 cggtgttttgttctt 172  Q
     ||||||||||||||    
T  18870661 tggtgttttgttctt 18870675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 26287970 - 26287902
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26287970 catagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 26287902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 26301227 - 26301159
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26301227 catagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 26301159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 26313221 - 26313153
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26313221 catagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 26313153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 1261955 - 1262050
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  1261955 tcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggttgaactgggtcaacaatctt 1262050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 26403240 - 26403328
Alignment:
Q  70 cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  26403240 cttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 26403328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 31071230 - 31071326
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||| | ||||| |||||||||||||    
T  31071230 tcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactcggtcaacaatctt 31071326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 4456124 - 4456028
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||  |||||||||||| || |||| ||||||||||||||||||||||||||||||||||||| ||||| | |||| |||||| |||||||    
T  4456124 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggaccgaaccgggtcagcaatctt 4456028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 155
Target Start/End: Original strand, 4696624 - 4696694
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattggct-gaactgggtcaacaatcttg 155  Q
    |||| |||||||||| ||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  4696624 catagtggattggagggctgctctctcccccagattaggtcatattggatcgaactgggtcaacaatcttg 4696694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 9765852 - 9765914
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatc 152  Q
    |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||    
T  9765852 tggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatc 9765914  T

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Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 151
Target Start/End: Complemental strand, 7412437 - 7412344
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaat 151  Q
    |||||||||  |||||||||||| || |||| ||||||||||||||||||||||||||| |||||| || ||||| | ||||||||||||||||    
T  7412437 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattggaccgaactgggtcaacaat 7412344  T

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Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 19175755 - 19175851
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||  |||||||||||| || |||| |||||||||||| ||||||||||||||||||||| || ||||| | ||||| |||||||||||||    
T  19175755 tcttgtaactctttgtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt 19175851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 23799577 - 23799675
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| |||||||||| |||||||||||| ||| |||||| || ||||| | ||||||||||||||||||||    
T  23799577 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcctccaaattaggtcatattggaccgaactgggtcaacaatcttg 23799675  T

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Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 5702483 - 5702581
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || ||||  ||||||||| | |||||||||||||| |||||| || ||||| | ||||||||||||||||||||    
T  5702483 tcttgtaactcttttgtaacactttcatcataggggattggagggatgctctctcccccatattaggtcatattggaccgaactgggtcaacaatcttg 5702581  T

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Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 151
Target Start/End: Complemental strand, 6127318 - 6127224
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaat 151  Q
    ||||||||| |||||||||||||| || |||| ||||||||||||||||||||| ||||| |||||| || ||||| | |||||| |||||||||    
T  6127318 tcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctcttccccaaattaggtcatattggaccgaactgagtcaacaat 6127224  T

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Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 19752427 - 19752492
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||||||||||||||||||| ||| |||| || ||||| | ||||| ||||||||||||||    
T  19752427 tggattggagagctgctctctcccctagactaggtcatattggaccgaactaggtcaacaatcttg 19752492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 43079877 - 43079937
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  43079877 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 43079937  T

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Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 43082248 - 43082308
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  43082248 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 43082308  T

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Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 124
Target Start/End: Original strand, 18810982 - 18811015
Alignment:
Q  91 tggattggagagctgctctctcccccagattagg 124  Q
    |||||||||| |||||||||||||||||||||||    
T  18810982 tggattggagggctgctctctcccccagattagg 18811015  T

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Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 44721118 - 44721178
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||||||||||||||||| |||| |||| ||  |||| | |||||||||||||||    
T  44721118 tggattggagagctgctctctcccgcagactaggtcaatttggaccgaactgggtcaacaa 44721178  T

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Target: chr2 (Bit Score: 175; Significance: 3e-94; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 22 - 289
Target Start/End: Original strand, 39811940 - 39812207
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagat 120  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  39811940 tctagggtttgttcatgtgtaaagcttga-aggctagagtcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagat 39812038  T
Q  121 taggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctcttgtgaggtt 219  Q
    ||||||| |||||||||||||| ||||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||| ||| || |||||||| ||||    
T  39812039 taggccatattggctgaactggttcaacaatctt-ctcggtgttttgttcttt-cttttaccgcttatcttgtttgtgctttggaatctcttgtgtggtt 39812136  T
Q  220 ttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatcac 289  Q
    |||||||||||||||||||||||| |||||||||||| |||||||  ||||||||||||||||||||||||    
T  39812137 ttgctatacactagcttagggctgttttgttgttgttggcttggagaccatttgttctcattgattatcac 39812207  T

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Target: chr2; HSP #2
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 11 - 285
Target Start/End: Complemental strand, 19344567 - 19344290
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 108  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  19344567 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 19344468  T
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttccttttaccgtttatcttgtttatgcttgtaagc 207  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||  ||||||||| |||    
T  19344467 tctcccctagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcttttccttttatcgtttatcttg--tatgcttgttagc 19344370  T
Q  208 tctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    |||| ||| |||||||||||||| || ||||| ||||| |||||||||||||||||||| |||||||| |||||| |||||    
T  19344369 tcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttgctctcatagatta 19344290  T

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Target: chr2; HSP #3
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 11 - 285
Target Start/End: Complemental strand, 19349425 - 19349148
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 108  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  19349425 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 19349326  T
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttccttttaccgtttatcttgtttatgcttgtaagc 207  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||  ||||||||| |||    
T  19349325 tctcccctagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcttttccttttatcgtttatcttg--tatgcttgttagc 19349228  T
Q  208 tctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    |||| ||| |||||||||||||| || ||||| ||||| |||||||||||||||||||| |||||||| |||||| |||||    
T  19349227 tcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttgctctcatagatta 19349148  T

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Target: chr2; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 22 - 285
Target Start/End: Complemental strand, 32246921 - 32246654
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagat 120  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  32246921 tctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagat 32246823  T
Q  121 taggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttacc--gtttatcttgtttatgc-ttgtaagctcttgtgagg 217  Q
    ||||||| |||||||||||  |||||||||||||| |||||||||||||||| | ||||  |  | ||||||||||||||| ||| || |||||||| ||    
T  32246822 taggccatattggctgaacaaggtcaacaatcttgttcggtgttttgttcttcctttttttcttgcttatcttgtttatgctttggaatctcttgtgtgg 32246723  T
Q  218 ttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||||||||||||||  |||| ||| ||||||||||||||||||||  |||||||||||||| |||||    
T  32246722 ttttgctatacactagtctaggactgttttgttgttgttagcttggagaccatttgttctcatagatta 32246654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 22 - 285
Target Start/End: Original strand, 44312575 - 44312839
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccaga 119  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  44312575 tctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccaga 44312673  T
Q  120 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgagg 217  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||| ||| |||  | ||| ||||| ||    
T  44312674 ttaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc-ttccttttatcgcttatcttgttt-tgctttggtatctctttgtgtgg 44312770  T
Q  218 ttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    |||||||||||||| |  |||||| | |||||||||||| |||||||  ||||||||||||||||||||    
T  44312771 ttttgctatacacttgtctagggcggctttgttgttgtttgcttggagaccatttgttctcattgatta 44312839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 22 - 271
Target Start/End: Original strand, 11098889 - 11099139
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt--cttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctccccca 117  Q
    |||||||||||||| ||||||| ||||| |||||||  ||  ||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||    
T  11098889 tctagggtttgttcttgtgtaa-gcttg-caagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctccccca 11098986  T
Q  118 gattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtga 215  Q
    |||||||||| |||||||||||||||||||||||||| || |||||||||||||| | || | ||  ||||||||||| ||| |||  | ||| |||||     
T  11098987 gattaggccatattggctgaactgggtcaacaatctt-cttggtgttttgttcttcctttcttcc--ttatcttgttt-tgctttggtatctctttgtgt 11099082  T
Q  216 ggttttgctatacactagcttagggctg--tttgttgttgttagcttggaagccattt 271  Q
    ||||||||| ||||||||  ||||||||  |||||||||||| |||||||| ||||||    
T  11099083 ggttttgctctacactagtctagggctgtttttgttgttgtt-gcttggaaaccattt 11099139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 14291584 - 14291372
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctc 158  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     
T  14291584 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctt 14291486  T
Q  159 ggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgaggttttgctatacactagcttagggctg--tttgttgttgt 254  Q
    ||||||||||||||  | |||   | ||||||||||| ||| |||| | ||| ||||| ||||||||| |||| |||  ||||||||  |||||||||||    
T  14291485 ggtgttttgttctt--cctttcttgcttatcttgttt-tgctttgttatctctttgtgtggttttgctctacattagtctagggctgtttttgttgttgt 14291389  T
Q  255 tagcttggaagccattt 271  Q
    | |||||||| ||||||    
T  14291388 ttgcttggaaaccattt 14291372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 9296402 - 9296614
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctc 158  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||     
T  9296402 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccaaattaggccatattggctgaactgggtcaacaatctt-ctt 9296500  T
Q  159 ggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgaggttttgctatacactagcttagggctg--tttgttgttgt 254  Q
    ||||||||||||||  | |||   | || |||||||| ||| |||| | ||| ||||| ||||||||| ||||||||  ||||||||  |||||||||||    
T  9296501 ggtgttttgttctt--cctttcttgcttttcttgttt-tgctttgttatctctttgtgtggttttgctctacactagactagggctgtttttgttgttgt 9296597  T
Q  255 tagcttggaagccattt 271  Q
    | |||||||| ||||||    
T  9296598 ttgcttggaaaccattt 9296614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 3491846 - 3491751
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3491846 tcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 3491751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 25398591 - 25398496
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  25398591 tcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggctgaactgggtcaacaatctt 25398496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 25403729 - 25403634
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||    
T  25403729 tcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggctgaactgagtcaacaatctt 25403634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 8040147 - 8040059
Alignment:
Q  70 cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||    
T  8040147 cttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggactgaactgggtcaacaatcttg 8040059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 40738911 - 40738844
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||| |||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||    
T  40738911 catagtggattggagagctgctctc-cccccagattaggtcatattggctgaactgggtcaacaatctt 40738844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 151
Target Start/End: Complemental strand, 13569425 - 13569331
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaat 151  Q
    ||||||||| |||||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||| | ||||||||||||||||    
T  13569425 tcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 13569331  T

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Target: chr2; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 21630040 - 21629943
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| ||||||||||||||||||||| |||||||||||| || ||||| ||||||||||||||||||||||    
T  21630040 tcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctct-ccccagattaggtcatattggactgaactgggtcaacaatcttg 21629943  T

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Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 14699008 - 14699105
Alignment:
Q  61 tcttgtaac-cttttgtaacacttca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| ||||||||||  |||| |||| |||||||||| ||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  14699008 tcttgtaactcttttgtaacctttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 14699105  T

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Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 28259178 - 28259274
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||  |||||||||||| || |||| ||||||||||||||||||||||||||| |||||| || ||||| | |||||||||||||||||||    
T  28259178 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgggtcaacaatctt 28259274  T

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Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 10445444 - 10445542
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-caca-tattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || | || |||||||||||||||||||||||||||||||||| || ||||| | ||||||| ||||||||||||    
T  10445444 tcttgtaactcttttgtaacactttcataatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactggatcaacaatcttg 10445542  T

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Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 17865300 - 17865202
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacatt-ggctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| |||||||||| | ||||||||||||||||||||| || ||| | ||||||||||||||||||||||    
T  17865300 tcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatattcgactgaactgggtcaacaatcttg 17865202  T

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Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 20522317 - 20522219
Alignment:
Q  61 tcttgtaacc-ttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||| ||||||||||||| || |||| |||||||||| | ||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  20522317 tcttgtaacccttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 20522219  T

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Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 34682334 - 34682432
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-cac-atattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| ||  ||| |||||||||||||||||||||||||||||||| | || ||||| | ||||||||||||||||||||    
T  34682334 tcttgtaactcttttgtaacactttcattatagtggattggagagctgctctctcccccagattatgtcatattggaccgaactgggtcaacaatcttg 34682432  T

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Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 25407718 - 25407653
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattagg 124  Q
    |||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||||||||    
T  25407718 tcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattagg 25407653  T

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Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 153
Target Start/End: Complemental strand, 34388955 - 34388859
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatct 153  Q
    ||||||||| |||||||||||||| || |||| |||||||||||||| ||||||||||||||||||| || ||||| | ||| ||||||||||||||    
T  34388955 tcttgtaactcttttgtaacactttcatcatagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaacaatct 34388859  T

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Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 153
Target Start/End: Original strand, 10707252 - 10707348
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatct 153  Q
    ||||||||| |||||||||||||| || |||| |||||||||||| || ||||||||||| |||||| || ||||| | ||||||||||||||||||    
T  10707252 tcttgtaactcttttgtaacactttcatcatagtggattggagagttgttctctcccccatattaggtcatattggaccgaactgggtcaacaatct 10707348  T

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Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 8390178 - 8390244
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaat 151  Q
    |||| ||||||||||||||||||||||||||| |||||| ||  |||| | ||||||||||||||||    
T  8390178 catagtggattggagagctgctctctcccccaaattaggtcattttggaccgaactgggtcaacaat 8390244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 31056108 - 31056044
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaatctt 154  Q
    ||||||||||||||||||||||||| |||||||| || ||||  | ||||| |||||||||||||    
T  31056108 tggattggagagctgctctctcccctagattaggtcatattgaaccgaactaggtcaacaatctt 31056044  T

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Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 35215646 - 35215586
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  35215646 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 35215586  T

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Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 35218023 - 35217963
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  35218023 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 35217963  T

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Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 155
Target Start/End: Complemental strand, 33118205 - 33118135
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||| |||||||||| |||||||||||||||| |||||| || ||||| | |||||| | |||||||||||    
T  33118205 catagtggattggagggctgctctctcccccaaattaggtcatattggaccgaactgagccaacaatcttg 33118135  T

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Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 33528621 - 33528719
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| |||||||||| | ||||||||  |||| |||||| || ||||| | ||||||||||||||||||||    
T  33528621 tcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctctttcccatattaggtcatattggaccgaactgggtcaacaatcttg 33528719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 155
Target Start/End: Complemental strand, 39483000 - 39482930
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||| ||||||||||  ||||||||||||||| |||||| || ||||| | ||||| ||||||||||||||    
T  39483000 catagtggattggaggcctgctctctcccccatattaggtcatattggaccgaactaggtcaacaatcttg 39482930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 1345574 - 1345635
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaat 151  Q
    ||||| |||||| |||||||||||||||| |||| || ||||| | ||||||||||||||||    
T  1345574 tggatcggagaggtgctctctcccccagagtaggtcatattggaccgaactgggtcaacaat 1345635  T

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Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 2838063 - 2838124
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaat 151  Q
    |||||||||||  |||||||||||||||| |||| || ||||| | ||||||||||||||||    
T  2838063 tggattggagatgtgctctctcccccagagtaggtcatattggaccgaactgggtcaacaat 2838124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 23078498 - 23078567
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattggct-gaactgggtcaacaatctt 154  Q
    |||| |||||||||||| || ||||||||||| |||||| || ||||| | |||||||||||||| ||||    
T  23078498 catagtggattggagagttgttctctcccccatattaggtcatattggatcgaactgggtcaacattctt 23078567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 36757790 - 36757859
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||| ||||||||||||||| | || ||||||||||||| || ||||| | ||| |||||||||||||||    
T  36757790 catactggattggagagctgttatcccccccagattaggtcatattggaccgaattgggtcaacaatctt 36757859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 42039697 - 42039766
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||| |||||| ||||||||||||||||| ||||||||| || ||||| | ||||| | |||||||||||    
T  42039697 catagtggattagagagctgctctctcccacagattaggtcatattggaccgaactagatcaacaatctt 42039766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 45332238 - 45332181
Alignment:
Q  94 attggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    ||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  45332238 attggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 45332181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 16940219 - 16940307
Alignment:
Q  70 cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||||||| || |||| |||||||||| |||| ||| |||||||||||| | || ||||| | ||| ||||||||||||||||    
T  16940219 cttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaattgggtcaacaatcttg 16940307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 17010884 - 17010972
Alignment:
Q  70 cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||||||| || |||| |||||||||| |||| ||| |||||||||||| | || ||||| | ||| ||||||||||||||||    
T  17010884 cttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaattgggtcaacaatcttg 17010972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 23452297 - 23452237
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  23452297 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 23452237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 36558924 - 36558864
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  36558924 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 36558864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 36561201 - 36561141
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  36561201 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 36561141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 170; Significance: 3e-91; HSPs: 3)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 11 - 289
Target Start/End: Original strand, 9583 - 9859
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctct 109  Q
    |||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  9583 caaagggtagatctagggtttgttcatgtgtaaagcttga-aggctagagtcttgtaaccttttgtaacactttctcatattggattggagagctgctct 9681  T
Q  110 ctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgcttgtaagctc 209  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||  | |||   | ||||||||||||||||||| |||||    
T  9682 ctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt--cctttcttgcttatcttgtttatgcttgttagctc 9778  T
Q  210 ttgtgaggttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatcac 289  Q
    ||||| |||||||||||| ||||||||||||||| |||||||||||| | |||||  ||||||| ||||||||||||||||    
T  9779 ttgtgtggttttgctatatactagcttagggctgttttgttgttgtttggttggagaccatttgctctcattgattatcac 9859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 289
Target Start/End: Original strand, 3 - 106
Alignment:
Q  185 ttatcttgtttatgcttgtaagctcttgtgaggttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgat 283  Q
    ||||||||||||||||||| ||||| ||||  ||||||||||||||||||||||||||| ||||||||||||  ||||||  ||||||| ||||||||||    
T  3 ttatcttgtttatgcttgttagctcgtgtg--gttttgctatacactagcttagggctgttttgttgttgtttacttggagaccatttgctctcattgat 100  T
Q  284 tatcac 289  Q
    ||||||    
T  101 tatcac 106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 3788 - 3845
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac 69  Q
    |||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||    
T  3788 caaagggtagatctagggtttgttcatgtgtaaagcttga-aggctagagtcttgtaac 3845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 163; Significance: 4e-87; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 11 - 285
Target Start/End: Complemental strand, 18656579 - 18656301
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctct 109  Q
    |||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  18656579 caaagggtagatctagggtttgttcatgtgtaaagcttga-atgctagagtcttgtaaccttttgtaacactttctcatattggattggagagctgctct 18656481  T
Q  110 ctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg----ttttgttctttccttttaccgtttatcttgtttatgc-ttgta 204  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || |||    ||||||||||||| ||||||||||||||||||  ||| ||||     
T  18656480 ctcccccagattaggccatattggctgaactgggtcaacaatcttgttcagtgttttttttgttctttcc-tttaccgtttatcttgtt--tgctttgtt 18656384  T
Q  205 agctc-ttgtgaggttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  18656383 agctctttgtgtggtttttctatacactagcttagggctgttttgttgttgttagcttggagaccatttgttctcattgatta 18656301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 11 - 287
Target Start/End: Original strand, 2677026 - 2677305
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 108  Q
    |||||||||| ||||||||||  ||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  2677026 caaagggtagatctagggttttgtcatgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 2677125  T
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttcctttt-accgtttatcttgtttatgcttgtaagc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||| |  |||||||||| |||||||||| |||    
T  2677126 tctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtg-tttgttcttttcttttcatggtttatcttg-ttatgcttgttagc 2677223  T
Q  208 tctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    |||| ||| |||||||||||||| || ||||| ||||| |||||||||||||||||||| |||||||| |||||| |||||||    
T  2677224 tcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttgctctcatagattatc 2677305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 11 - 287
Target Start/End: Original strand, 2672870 - 2673149
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 108  Q
    |||||||||| ||||||||||  ||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  2672870 caaagggtagatctagggttttgtcatgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 2672969  T
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttcctttt-accgtttatcttgtttatgcttgtaagc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||| |  |||||||||| |||||||||| |||    
T  2672970 tctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtg-tttgttcttttcttttcatggtttatcttg-ttatgcttgttagc 2673067  T
Q  208 tctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    |||| ||| |||||||||||||| || ||||| ||||| |||||||||||||||||||| |||||||  |||||| |||||||    
T  2673068 tcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttactctcatagattatc 2673149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 11 - 287
Target Start/End: Complemental strand, 8512363 - 8512083
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 108  Q
    |||||||||| ||||||||||  || |||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  8512363 caaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 8512264  T
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttccttttaccg-tttatcttgtttatgcttgtaag 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||| || |||||||||  ||||||||| |     
T  8512263 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcgttttcgtttatcgttttatcttg--tatgcttgttaa 8512166  T
Q  207 ctctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    ||||| ||| |||| ||||| ||| || ||||| ||||| ||||||||||||||||||||||||||||| |||||| |||||||    
T  8512165 ctcttagtgtggttgtgctacacattaggctta-ggctgttttgttgttgttagcttggaagccatttgctctcatagattatc 8512083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 11 - 287
Target Start/End: Complemental strand, 8517243 - 8516963
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 108  Q
    |||||||||| ||||||||||  || |||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  8517243 caaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 8517144  T
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttccttttaccg-tttatcttgtttatgcttgtaag 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||| || |||||||||  ||||||||| |     
T  8517143 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcgttttcgtttatcgttttatcttg--tatgcttgttaa 8517046  T
Q  207 ctctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    ||||| ||| |||| ||||| ||| || ||||| ||||| ||||||||||||||||||||||||||||| |||||| |||||||    
T  8517045 ctcttagtgtggttgtgctacacattaggctta-ggctgttttgttgttgttagcttggaagccatttgctctcatagattatc 8516963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 22 - 285
Target Start/End: Original strand, 22173146 - 22173410
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccaga 119  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  22173146 tctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccaga 22173244  T
Q  120 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgagg 217  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||| ||| ||| |||  | ||| ||||| ||    
T  22173245 ttaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc-ttccttttaccgcttatcttattt-tgctttggtatctctttgtgtgg 22173341  T
Q  218 ttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  22173342 ttttgctatacactagtctagggctgttttgttgttgtttgcttggagaccatttgttctcattgatta 22173410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 6 - 287
Target Start/End: Complemental strand, 24968258 - 24967975
Alignment:
Q  6 agtagcaaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagc 103  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  24968258 agtaccaaagggtagatctcgggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggagagc 24968159  T
Q  104 tgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttccttttaccgtttatcttgtttatgcttg 202  Q
    | |||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||  ||||||||    
T  24968158 tactctctccccaaaattaagccacattggctgaactgggtcaacaatcttgctcggtgttt-gttcgttttcttttatcgtttatcttg--tatgcttg 24968062  T
Q  203 taagctctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    | ||||||| ||| |||||||||||||| || ||||| ||||| |||||||||||||||||||| ||||||||  ||||| |||||||    
T  24968061 ttagctcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttgcactcatagattatc 24967975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 11 - 211
Target Start/End: Complemental strand, 32475629 - 32475430
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacacttcacatattggattggagagctgctctc 110  Q
    |||||||||| ||||||||||  || |||||||||||||| |||||||| |||||||||  |||||||   |||||||||||||||||||||||||||||    
T  32475629 caaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactctttgtaaacattcacatattggattggagagctgctctc 32475530  T
Q  111 tcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttccttttaccgtttatcttgtttatgcttgtaagctc 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||| |||||||||||  ||||||||| |||||    
T  32475529 tcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcttttatcgtttatcttg--tatgcttgttagctc 32475432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 11 - 211
Target Start/End: Complemental strand, 32480487 - 32480288
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacacttcacatattggattggagagctgctctc 110  Q
    |||||||||| ||||||||||  || |||||||||||||| |||||||| |||||||||  |||||||   |||||||||||||||||||||||||||||    
T  32480487 caaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactctttgtaaacattcacatattggattggagagctgctctc 32480388  T
Q  111 tcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttccttttaccgtttatcttgtttatgcttgtaagctc 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||| |||||| |||||||||||  ||||||||| |||||    
T  32480387 tcccccagattaggccacattggctgaactgggtcaacaatcttggttggtgttttgttcgttttcttttatcgtttatcttg--tatgcttgttagctc 32480290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 22 - 289
Target Start/End: Original strand, 28503826 - 28504084
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt--cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccag 118  Q
    |||||||||| ||| |||||||||||||| | ||||||||  |||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||    
T  28503826 tctagggtttattcttgtgtaaagcttga-aggctagagtttcttgtaaccttttgtaacactttctcatattggattggagagctgctctcttccccag 28503924  T
Q  119 attaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgag 216  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||          |||||||||||| |||| | ||| ||||| |    
T  28503925 attaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc-ttcctt----------tcttgtttatgctttgttatctctttgtgtg 28504012  T
Q  217 gttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatcac 289  Q
    |||||||||||||||||   ||||||| |||||||||||| |||||||| |||||| ||||||| |||||||||    
T  28504013 gttttgctatacactagtcaagggctgttttgttgttgtt-gcttggaaaccattt-ttctcatagattatcac 28504084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 7167340 - 7167129
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctc 158  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     
T  7167340 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctt 7167242  T
Q  159 ggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgaggttttgctatacactagcttagggctg-tttgttgttgtt 255  Q
    ||||||||||||||  | |||   | ||||||||||||||| |||| | ||| ||||| ||||||||| ||||||||  |||||||| ||||||||||||    
T  7167241 ggtgttttgttctt--cctttcttgcttatcttgtttatgctttgttatctctttgtgtggttttgctctacactagtctagggctgttttgttgttgtt 7167144  T
Q  256 agcttggaagccattt 271  Q
     |||||||| ||||||    
T  7167143 -gcttggaaaccattt 7167129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 106 - 287
Target Start/End: Complemental strand, 10207983 - 10207801
Alignment:
Q  106 ctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttcctttt-accgtttatcttgtttatgcttgta 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||| |  |||||||||| ||||||||||     
T  10207983 ctctctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtg-tttgttcttttcttttcatggtttatcttg-ttatgcttgtt 10207886  T
Q  205 agctctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    ||||||| ||| |||||||||||||| || ||||| ||||| |||||||||||||||||||| ||||||||  ||||| |||||||    
T  10207885 agctcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttgcactcatagattatc 10207801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 2671587 - 2671699
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctc 158  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     
T  2671587 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctt 2671685  T
Q  159 ggtgttttgttctt 172  Q
    ||||||||||||||    
T  2671686 ggtgttttgttctt 2671699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 8739064 - 8739176
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctc 158  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     
T  8739064 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctt 8739162  T
Q  159 ggtgttttgttctt 172  Q
    ||||||||||||||    
T  8739163 ggtgttttgttctt 8739176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 9091302 - 9091414
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctc 158  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     
T  9091302 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctt 9091400  T
Q  159 ggtgttttgttctt 172  Q
    ||||||||||||||    
T  9091401 ggtgttttgttctt 9091414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 40372796 - 40372908
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctc 158  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     
T  40372796 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctt 40372894  T
Q  159 ggtgttttgttctt 172  Q
    ||||||||||||||    
T  40372895 ggtgttttgttctt 40372908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 61 - 174
Target Start/End: Complemental strand, 8477458 - 8477343
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctc 158  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     
T  8477458 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctt 8477360  T
Q  159 ggtgt-tttgttctttc 174  Q
    ||||| |||||||||||    
T  8477359 ggtgtgtttgttctttc 8477343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 26928592 - 26928687
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || |||| |||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  26928592 tcttgtaaccctttgtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattggctgaactgggtcaacaatctt 26928687  T

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Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 1306044 - 1305949
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || | || ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  1306044 tcttgtaaccctttgtaacactttcatcgtagtggattggagagctgctatctcccctagattaggccatattggctgaactgggtcaacaatctt 1305949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 111
Target Start/End: Original strand, 28501659 - 28501750
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt--cttgtaaccttttgtaacactt-cacatattggattggagagctgctctct 111  Q
    |||||||||| ||| |||||||||||||| | ||||||||  |||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  28501659 tctagggtttattcttgtgtaaagcttga-aggctagagtttcttgtaaccttttgtaacactttctcatattggattggagagctgctctct 28501750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 8370477 - 8370573
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||  |||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  8370477 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 8370573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 27974943 - 27975039
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||  |||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  27974943 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 27975039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 32143417 - 32143321
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||| | ||||| |||||||||||||    
T  32143417 tcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt 32143321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 18552873 - 18552971
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| |||||||||| ||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  18552873 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 18552971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 21711319 - 21711222
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||  |||||||||||| || |||| |||||| ||||||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  21711319 tcttgtaactctttgtaacactttcatcatagtggatttgagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 21711222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 27986464 - 27986533
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  27986464 catagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 27986533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 16264446 - 16264350
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||  |||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||| | ||||| |||||||||||||    
T  16264446 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt 16264350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 27453054 - 27452958
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || |||| |||||||||||||||||||||||||| ||||||| || ||||| | ||||||| |||||||||||    
T  27453054 tcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccccggattaggtcatattggaccgaactggatcaacaatctt 27452958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 153
Target Start/End: Complemental strand, 36029190 - 36029094
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatct 153  Q
    ||||||||| |||||||||||||| || |||| ||||||||||||||||| |||||||||||||||| || ||||| | ||||||||||||||||||    
T  36029190 tcttgtaactcttttgtaacactttcatcatagtggattggagagctgctttctcccccagattaggtcatattggacagaactgggtcaacaatct 36029094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 151
Target Start/End: Original strand, 1736295 - 1736389
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaat 151  Q
    ||||||||| |||||||||||||| || |||| |||||||||| ||||||||||||||||||||||| || ||||| | ||||||||||||||||    
T  1736295 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 1736389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 30709808 - 30709877
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||| |||||||||| ||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  30709808 catagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 30709877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 33386684 - 33386753
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||| |||||||||||||||||||||||||||||||||| || ||||| | ||||||| |||||||||||    
T  33386684 catagtggattggagagctgctctctcccccagattaggtcatattggaccgaactggatcaacaatctt 33386753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 3715992 - 3716090
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| | |||||||||||||||||||| || |||||||| || ||||| | ||||||||||||||||||||    
T  3715992 tcttgtaactcttttgtaacactttcatcatagtagattggagagctgctctctctcctagattaggtcatattggaccgaactgggtcaacaatcttg 3716090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 154
Target Start/End: Complemental strand, 25795843 - 25795781
Alignment:
Q  93 gattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||||||||||||||||||||||||| || ||||| | ||||| |||||||||||||    
T  25795843 gattggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt 25795781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 40592772 - 40592870
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| | |||||||||||| ||||||||| ||||||||| || ||||| | ||||||||||||||||||||    
T  40592772 tcttgtaactcttttgtaacactttcatcatagtcgattggagagcttctctctcccacagattaggtcatattggaccgaactgggtcaacaatcttg 40592870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 48438311 - 48438213
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| |||||||||| ||||||||||||||||||||||| || ||||| | ||||| |||||| |||||||    
T  48438311 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactaggtcaataatcttg 48438213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 1417513 - 1417578
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||| | ||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  1417513 tggattggagggatgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 1417578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 6794704 - 6794801
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||  |||||||||||| || |||| ||||||||||||||||||||||||||| |||||| || ||||| |  ||| |||||||||||||||    
T  6794704 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattggacctaaccgggtcaacaatcttg 6794801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 26299085 - 26298987
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || |||| | |||||||| ||||||||||||||||||||| | || ||||  | ||||||||||||||||||||    
T  26299085 tcttgtaactcttttgtaacactttcatcatagtagattggagggctgctctctcccccagattatgtcatattgaaccgaactgggtcaacaatcttg 26298987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 155
Target Start/End: Complemental strand, 37466355 - 37466290
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||| ||| ||||||||||||||||||| || ||||| | |||||| |||||||||||||    
T  37466355 tggattggagggctactctctcccccagattaggtcatattggaccgaactgtgtcaacaatcttg 37466290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 4386947 - 4386983
Alignment:
Q  88 tattggattggagagctgctctctcccccagattagg 124  Q
    |||||||||||||||||||||||||||||||| ||||    
T  4386947 tattggattggagagctgctctctcccccagagtagg 4386983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 38210569 - 38210629
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    ||||||||||||||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  38210569 tggattggagagctgctctctcccccatactaggtcagattggaccgaactgggtcaacaa 38210629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 50494198 - 50494258
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  50494198 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 50494258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 53894119 - 53894055
Alignment:
Q  87 atattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  53894119 atattggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 53894055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 47923931 - 47923994
Alignment:
Q  93 gattggagagctgctctctcccccagattaggccacattggct-gaactgggtcaacaatcttg 155  Q
    ||||| || |||||||||||||| |||||||| || ||||| | ||||||||||||||||||||    
T  47923931 gattgaagggctgctctctcccctagattaggtcatattggatcgaactgggtcaacaatcttg 47923994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 3328379 - 3328444
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattggc-tgaactgggtcaacaatcttg 155  Q
    ||||||| || |||||||||||| | |||||||| || |||||  |||||||||||||||||||||    
T  3328379 tggattgaagggctgctctctcctctagattaggtcatattggaatgaactgggtcaacaatcttg 3328444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 39040010 - 39040079
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||| |||||||||||| || ||||| |||||||||||| || ||||| | ||||| |||||||||||||    
T  39040010 catagtggattggagagttgttctcttccccagattaggtcatattggaccgaactaggtcaacaatctt 39040079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 458483 - 458543
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  458483 tggattggagggctgctctctcccccagactaggtcaggttggaccgaactgggtcaacaa 458543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 6063504 - 6063444
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||| ||||    
T  6063504 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtccacaa 6063444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 10621588 - 10621528
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||  || ||||| | |||||||||||||||    
T  10621588 tggattggagggctgctctctcccccagactagctcagattggaccgaactgggtcaacaa 10621528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 39153405 - 39153357
Alignment:
Q  107 tctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  39153405 tctctcccccagattaggtcaagttggactgaactgggtcaacaatctt 39153357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 22 - 285
Target Start/End: Original strand, 35013 - 35277
Alignment:
Q  22 tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccaga 119  Q
    ||||||||||||||||||||||||||||| | |||||||| ||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  35013 tctagggtttgttcatgtgtaaagcttga-aggctagagttcttctaaccttttgtaacactttctcatattggattggagagctgctctctcccccaga 35111  T
Q  120 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgagg 217  Q
    |||||||| |||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||||||| ||| |||  | ||| ||||| ||    
T  35112 ttaggccatattggctgaactgggttaacaatctt-ctcggtgttttgttc-ttccttttaccgcttatcttgttt-tgctttggtatctctttgtgtgg 35208  T
Q  218 ttttgctatacactagcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgatta 285  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  35209 ttttgctatacactagtctagggctgttttgttgttgtttgcttggagaccatttgttctcattgatta 35277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 11 - 287
Target Start/End: Original strand, 2190 - 2468
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 108  Q
    |||||||||| |||| |||||  || |||||||||||||| |||||||| ||||||||| |||||||||||| ||||||||||||||||||||||| |||    
T  2190 caaagggtagatctatggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctactc 2289  T
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttccttttaccgtttatcttgtttatgcttgtaagc 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| | |||| |||||||||||  ||||||||| |||    
T  2290 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcgttttcctttatcgtttatcttg--tatgcttgttagc 2386  T
Q  208 tctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    |||| ||| |||||||||||||| || ||||| ||||| |||||||||||||||||||| ||||||||  ||||| |||||||    
T  2387 tcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttgcactcatggattatc 2468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 136; Significance: 5e-71; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 11 - 287
Target Start/End: Original strand, 19104 - 19382
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacact-tcacatattggattggagagctgctc 108  Q
    |||||||||| ||||||||||  || |||||||||||||| |||||||| ||||||||| ||||||||||||  |||||||||| |||||||||||||||    
T  19104 caaagggtagatctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacactcacatattgtattggagagctgctc 19203  T
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttccttttaccgtttatcttgtttatgcttgtaagc 207  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||||||||  ||||||||| |||    
T  19204 tctcccccagattaggccacaatggctgaactgggtcaacaatcttgctcggtg-tttgttcgttttcttttatcgtttatcttg--tatgcttgttagc 19300  T
Q  208 tctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    |||| ||| |||||||||||||| || ||||| ||||| |||||||||||||||||||| ||||||||  ||||| |||||||    
T  19301 tcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttgcactcatagattatc 19382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 11 - 285
Target Start/End: Original strand, 14248 - 14525
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 108  Q
    |||||||||| ||||||||||  || |||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  14248 caaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 14347  T
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttccttttaccgtttatcttgtttatgcttgtaagc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||| |||||||||||  ||||||||| |||    
T  14348 tctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcttttatcgtttatcttg--tatgcttgttagc 14445  T
Q  208 tctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttg-ttagcttggaagccatttgttctcattgatta 285  Q
    |||| ||| || |||||| |||| || ||||| ||||| |||||||||| |||||||||| ||||||||  ||||| |||||    
T  14446 tcttagtgtggatttgct-tacattaggctta-ggctgttttgttgttgattagcttggaggccatttgcactcatagatta 14525  T

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Target: scaffold0028 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 11 - 287
Target Start/End: Original strand, 148895 - 149173
Alignment:
Q  11 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 108  Q
    |||||||||| |||| |||||  || |||||||||||||| |||||||| ||||||||| |||||||||||| ||||||||||||||||||||||| |||    
T  148895 caaagggtagatctatggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctactc 148994  T
Q  109 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttccttttaccgtttatcttgtttatgcttgtaagc 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| | |||| |||||||||||  ||||||||| |||    
T  148995 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcgttttcctttatcgtttatcttg--tatgcttgttagc 149091  T
Q  208 tctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgttctcattgattatc 287  Q
    |||| ||| |||||||||||||| || ||||| ||||| |||||||||||||||||||| ||||||||  ||||| |||||||    
T  149092 tcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttgcactcatagattatc 149173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 82 - 285
Target Start/End: Original strand, 181976 - 182180
Alignment:
Q  82 ttcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc-tttcctttta 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||    
T  181976 ttcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttctttta 182075  T
Q  181 ccgtttatcttgtttatgcttgtaagctctt-gtgaggttttgctatacacta-gcttagggctg-tttgttgttg-ttagcttggaagccatttgttct 276  Q
     |||||||||||  ||||||||| ||||||| ||| || |||||| |||| || ||||| ||||| |||||||||| |||||||||| ||||||||  ||    
T  182076 tcgtttatcttg--tatgcttgttagctcttagtgtggatttgct-tacattaggctta-ggctgttttgttgttgattagcttggaggccatttgcact 182171  T
Q  277 cattgatta 285  Q
    ||| |||||    
T  182172 catagatta 182180  T

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Target: scaffold0188 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 17953 - 18048
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17953 tcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 18048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 24046 - 24141
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 154  Q
    |||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24046 tcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 24141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 8420 - 8516
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||  |||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  8420 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 8516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 22343 - 22403
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  22343 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 22403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 24618 - 24678
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  24618 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 24678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 153
Target Start/End: Complemental strand, 85747 - 85684
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatct 153  Q
    ||||||||||||| |||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  85747 tggattggagagccgctctctcccccagattaggtcatattggactgaactgggtcaacaatct 85684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 43962 - 44058
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||  |||||||||||| || |||| ||||||||||||||||||||||||||||| |||  || ||||| | |||||||||||||||||||    
T  43962 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagaatagatcatattggaccgaactgggtcaacaatctt 44058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 36833 - 36929
Alignment:
Q  61 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 154  Q
    |||||||||  |||||||||||| || |||| ||| |||| |||||||||||| ||| |||||||| || ||||| | |||||||||||||||||||    
T  36833 tcttgtaactctttgtaacactttcatcatagtgggttggcgagctgctctcttccctagattaggtcatattggaccgaactgggtcaacaatctt 36929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 5770 - 5682
Alignment:
Q  70 cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||||||| || |||| ||||||| || ||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  5770 cttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 5682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 2579 - 2491
Alignment:
Q  70 cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    |||||||||||||| || |||| |||||||||| |||||| |||||||||||||||| || |||||   ||||||||||||||||||||    
T  2579 cttttgtaacactttcatcatagtggattggagggctgctgtctcccccagattaggtcatattggagcgaactgggtcaacaatcttg 2491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 133308 - 133377
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaatctt 154  Q
    |||| ||||||||||||||||||||||||||| |||||| || ||||  |  ||||||||||||||||||    
T  133308 catagtggattggagagctgctctctcccccatattaggtcatattgaacctaactgggtcaacaatctt 133377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 10826 - 10728
Alignment:
Q  61 tcttgtaac-cttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 155  Q
    ||||||||| |||||||||||||| || | || ||||||||||||||||||||||||||| |||||| || ||||| | |||||||||||| |||||||    
T  10826 tcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgggtcaataatcttg 10728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 45322 - 45253
Alignment:
Q  86 catattggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaatctt 154  Q
    |||| |||||||||||||||||||||||||||||||||| || ||||  | |||||| ||||||||||||    
T  45322 catagtggattggagagctgctctctcccccagattaggtcatattgaaccgaactgagtcaacaatctt 45253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 285
Target Start/End: Original strand, 300 - 463
Alignment:
Q  122 aggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgtaagctc-ttgtgaggtt 219  Q
    |||||| |||||||||||| ||||||||||||| || |||||||||||||||| || ||  | ||||||||||| ||| || | | ||| ||||| ||||    
T  300 aggccatattggctgaactaggtcaacaatctt-cttggtgttttgttctttctttcta--gcttatcttgttt-tgctttattatctctttgtgtggtt 395  T
Q  220 ttgctatacactagcttagggctgtttgttgttgt--tagcttggaagccatttgttctcattgatta 285  Q
    |||||   |||||| |||||||||||| |||||||  | |||||||| |||||| | ||||| |||||    
T  396 ttgctcctcactagtttagggctgttttttgttgttgttgcttggaaaccatttttgctcatagatta 463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 269 - 329
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  269 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 124
Target Start/End: Complemental strand, 11533 - 11500
Alignment:
Q  91 tggattggagagctgctctctcccccagattagg 124  Q
    ||||||||||||||||||||||||||||| ||||    
T  11533 tggattggagagctgctctctcccccagactagg 11500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 69352 - 69292
Alignment:
Q  91 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 150  Q
    ||||| ||||||||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  69352 tggatcggagagctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 69292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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