View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4017_high_9 (Length: 562)

Name: NF4017_high_9
Description: NF4017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4017_high_9
NF4017_high_9
[»] chr2 (13 HSPs)
chr2 (189-376)||(9909013-9909200)
chr2 (379-539)||(9909450-9909610)
chr2 (1-193)||(9896960-9897152)
chr2 (278-371)||(33174968-33175061)
chr2 (277-371)||(8073901-8073995)
chr2 (306-371)||(1707079-1707144)
chr2 (278-371)||(29259663-29259756)
chr2 (278-371)||(30966244-30966337)
chr2 (278-371)||(30966700-30966793)
chr2 (279-371)||(83028-83120)
chr2 (278-371)||(1912535-1912628)
chr2 (278-371)||(5399860-5399953)
chr2 (278-371)||(18098921-18099014)
[»] chr1 (9 HSPs)
chr1 (191-368)||(46337884-46338061)
chr1 (274-368)||(31822709-31822803)
chr1 (278-371)||(43057566-43057659)
chr1 (274-371)||(20061234-20061331)
chr1 (278-371)||(50002328-50002421)
chr1 (279-371)||(7548102-7548194)
chr1 (278-371)||(35760957-35761050)
chr1 (278-371)||(52250216-52250309)
chr1 (279-331)||(843016-843068)
[»] chr5 (12 HSPs)
chr5 (277-371)||(24182288-24182382)
chr5 (274-371)||(10926989-10927086)
chr5 (278-371)||(10927446-10927539)
chr5 (278-371)||(189078-189171)
chr5 (278-371)||(2193826-2193919)
chr5 (274-371)||(8642077-8642174)
chr5 (278-371)||(11160724-11160817)
chr5 (278-371)||(20039517-20039610)
chr5 (279-371)||(17445498-17445590)
chr5 (306-371)||(1821944-1822009)
chr5 (278-371)||(2473969-2474062)
chr5 (278-371)||(3886644-3886737)
[»] chr7 (12 HSPs)
chr7 (274-371)||(42515550-42515647)
chr7 (278-371)||(6747641-6747734)
chr7 (274-371)||(679823-679919)
chr7 (278-371)||(2611695-2611788)
chr7 (274-371)||(2941800-2941897)
chr7 (278-371)||(42515102-42515195)
chr7 (304-368)||(30572661-30572724)
chr7 (278-371)||(2193266-2193359)
chr7 (278-371)||(6719117-6719210)
chr7 (278-371)||(25182371-25182464)
chr7 (278-371)||(28495864-28495957)
chr7 (279-371)||(43233424-43233516)
[»] chr4 (16 HSPs)
chr4 (274-371)||(21220368-21220465)
chr4 (283-368)||(31817438-31817523)
chr4 (278-371)||(4127926-4128019)
chr4 (274-371)||(8467837-8467934)
chr4 (278-367)||(50399034-50399123)
chr4 (279-371)||(29628704-29628796)
chr4 (278-371)||(3169216-3169309)
chr4 (278-371)||(9423895-9423988)
chr4 (278-371)||(44471362-44471455)
chr4 (278-371)||(50398575-50398668)
chr4 (278-371)||(51331318-51331411)
chr4 (307-371)||(45682242-45682306)
chr4 (274-371)||(1464153-1464250)
chr4 (278-371)||(14572187-14572280)
chr4 (278-371)||(21067292-21067385)
chr4 (278-371)||(44470911-44471004)
[»] chr3 (13 HSPs)
chr3 (282-371)||(25230291-25230380)
chr3 (278-371)||(25230748-25230841)
chr3 (282-371)||(25237878-25237967)
chr3 (278-371)||(25238335-25238428)
chr3 (280-371)||(25239120-25239211)
chr3 (278-371)||(30529697-30529790)
chr3 (278-371)||(31284319-31284412)
chr3 (279-371)||(20885160-20885252)
chr3 (278-371)||(11180077-11180170)
chr3 (278-371)||(14813959-14814052)
chr3 (274-371)||(39640943-39641040)
chr3 (278-371)||(41472311-41472403)
chr3 (278-371)||(50347756-50347849)
[»] scaffold1138 (1 HSPs)
scaffold1138 (207-371)||(740-904)
[»] chr8 (7 HSPs)
chr8 (278-371)||(34308522-34308615)
chr8 (278-361)||(34308992-34309075)
chr8 (274-368)||(27819292-27819386)
chr8 (278-371)||(2044068-2044161)
chr8 (278-371)||(6464953-6465046)
chr8 (278-371)||(22705182-22705275)
chr8 (279-371)||(28375097-28375189)
[»] chr6 (6 HSPs)
chr6 (278-371)||(20896731-20896824)
chr6 (278-371)||(31821735-31821828)
chr6 (306-371)||(13492827-13492892)
chr6 (278-368)||(6330958-6331048)
chr6 (274-371)||(20735701-20735798)
chr6 (322-374)||(17027571-17027623)
[»] scaffold0047 (1 HSPs)
scaffold0047 (274-367)||(17645-17738)
[»] scaffold0168 (1 HSPs)
scaffold0168 (279-371)||(2753-2845)
[»] scaffold0499 (1 HSPs)
scaffold0499 (306-371)||(2094-2159)
[»] scaffold0040 (1 HSPs)
scaffold0040 (306-371)||(2253-2318)
[»] scaffold0007 (1 HSPs)
scaffold0007 (278-371)||(142317-142410)
[»] scaffold0005 (1 HSPs)
scaffold0005 (278-371)||(245096-245189)
[»] scaffold0322 (1 HSPs)
scaffold0322 (322-374)||(19020-19072)


Alignment Details
Target: chr2 (Bit Score: 160; Significance: 5e-85; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 189 - 376
Target Start/End: Original strand, 9909013 - 9909200
Alignment:
Q  189 gagtgaccgtcgatgaacatggcacatgcaatgagctgctcctgacatgcttctaggaaattgacaaatgaatgaaccaatttatatcagaatgagaggg 288  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  9909013 gagtgatcgtcgatgaacatggcacatgcaatgagctgctcctgacatgcttttaggaaattgacaaatgaatgaaccaattcatatcagaatgagaggg 9909112  T
Q  289 atcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagattcaac 376  Q
    ||| ||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9909113 atcctgaaatcgtataagtatgagactatatggttgaaggagggtttataatgattaattggtactacctataccaacaagattcaac 9909200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 379 - 539
Target Start/End: Original strand, 9909450 - 9909610
Alignment:
Q  379 cctagaaattttggtactcccttcttcatgcagataatattatggtgttttgtaaagggtaaaaagacagcctttgagtcacctatccagttcattcgtg 478  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  9909450 cctagaaattttggtactcccttcttcatgcagataatattatggtgttttgtaaagggtaaaaagacagcctttgagtcacttatccagctcattcgtg 9909549  T
Q  479 aatatagtgatgttttgtttagaagacatggatttctacaactcataatatttttcacgac 539  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9909550 aatatagtgatgttttgtttagaagacatggatttctacaactcataatatttttcacgac 9909610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 9896960 - 9897152
Alignment:
Q  1 attggaattttctttttagtgttttgataactgttggtgtcaaccctgtgttttctaattgggttcatgttattcttaaatctgacaatttttctatctt 100  Q
    |||||||||||||| |||||||||||| |||| ||||| ||||||||| ||||| ||||||||||||||| ||||||||||||||||  |||||||||||    
T  9896960 attggaattttcttcttagtgttttgacaacttttggtttcaaccctgggttttgtaattgggttcatgtgattcttaaatctgacatgttttctatctt 9897059  T
Q  101 ggttacctgttaactaacaaatcattttgcaagtatgcgttgagtgtttcaaggtgatcctctgacgccaaaggcttatgagaacgtggagtg 193  Q
    |||||| ||  ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  9897060 ggttacatggcaaccaacaaatcattttgcaagtatgcgttgagtgtttcaaggtgatcctctaacgccaaaggctgacgagaacgtggagtg 9897152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 33174968 - 33175061
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||  ||| || ||||| ||||| ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  33174968 gaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 33175061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 371
Target Start/End: Original strand, 8073901 - 8073995
Alignment:
Q  277 agaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||||||||||| ||  | ||||| | ||||| | ||||||| ||  ||||||  |||  |||||||||||||||||||||||||    
T  8073901 agaatgagagggatcatgagattgtgcaggtatgggtctataaggttgaagggagacttataagaattgtttggtactacctataccaacaagat 8073995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 306 - 371
Target Start/End: Original strand, 1707079 - 1707144
Alignment:
Q  306 gtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||||| ||||||||||||||  ||||||  |||  ||||||||||||||| |||||||||    
T  1707079 gtatgagactacatgattgaaggaagacttataagaattgtttggtactacctatatcaacaagat 1707144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 29259756 - 29259663
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||| |||| ||||||| ||||  ||| ||||||||||| |||| |  |||  |||||||||| |||| |||||||||    
T  29259756 gaatgagagggatcctgagaccgtacaagtatgggactgcatggttgaaggaaggcttattaaaattgtttggtactacatatatcaacaagat 29259663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 30966244 - 30966337
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||  |||| | ||||| ||||  ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  30966244 gaatgagagggatcctgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 30966337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 30966700 - 30966793
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||  |||| | ||||| ||||  ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  30966700 gaatgagagggatcctgaggccgtacatgtatgggactgcatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagat 30966793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 371
Target Start/End: Original strand, 83028 - 83120
Alignment:
Q  279 aatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||||||| |||||| ||  | ||||||||||| ||| ||||||| | | ||||||  ||   |||||||||||||||||||||||||    
T  83028 aatgagagggatcctgagattgtgcaggtatgagactacatggttgaaggtatgcttataagaatcgtttggtactacctataccaacaagat 83120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 1912535 - 1912628
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| |||| |  | || ||||||||||| ||| ||||| | || |||||||  |||  ||||||||||||||| |||||||||    
T  1912535 gaatgagagggatcctgaggttatgtaggtatgagactacatggttgaaagtagatttataagaattgtttggtactacctatatcaacaagat 1912628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 5399953 - 5399860
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| |||| ||||  ||||||| || | |||| || |||| ||| ||||||  |||  ||||||||||||||| |||||||||    
T  5399953 gaatgagagggatcttgaggtcgtgcaagtatgggagtgtatggtttaagggaggcttataagaattgtttggtactacctatatcaacaagat 5399860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 18099014 - 18098921
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||| ||| ||||  ||| || ||||||||||| ||| ||||||| | | ||||||  |||  ||||||||||||||| |||||||||    
T  18099014 gaatgagaggaatcctgaggccgtgtaggtatgagactacatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagat 18098921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 9e-22; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 191 - 368
Target Start/End: Complemental strand, 46338061 - 46337884
Alignment:
Q  191 gtgaccgtcgatgaacatggcacatgcaatgagctgctcctgacatgcttctaggaaattgacaaatgaatgaaccaatttatatcagaatgagagggat 290  Q
    |||| ||||||||  |||||||| |||||||||| |||||||| || ||| |||| ||  |||| ||||||||||||| | ||||||||||||||| |||    
T  46338061 gtgatcgtcgatgggcatggcacgtgcaatgagcggctcctgatatacttttaggcaaacgacacatgaatgaaccaaatcatatcagaatgagagagat 46337962  T
Q  291 catgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaa 368  Q
    | |||| |||| |||||||  |||||||   || |||||  | | |||| ||||||||| |||||| |||||||||||    
T  46337961 cttgaggtcgtgtaagtattggactatacagtttaaggagagctcataaggattaattgatactacatataccaacaa 46337884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 274 - 368
Target Start/End: Complemental strand, 31822803 - 31822709
Alignment:
Q  274 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaa 368  Q
    |||||||||||||||||||||||  ||| || ||||||||||| ||| |||||||||| |||||||  |||| |||||||||| |||| ||||||    
T  31822803 atcagaatgagagggatcatgaggccgtgtaggtatgagactacatggttgaaggaagatttataagaattatttggtactacatatatcaacaa 31822709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 43057659 - 43057566
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||  ||| || ||||||||||| ||| ||||||||||| ||||||  |||  |||||||||||||||  ||||||||    
T  43057659 gaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagat 43057566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 20061331 - 20061234
Alignment:
Q  274 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||||||| |||| ||||  | ||||| ||||  ||| ||||||||| | ||||||  |||  ||||||||||||||| |||||||||    
T  20061331 atcagaatgagagggatcctgaggtcgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagat 20061234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 50002421 - 50002328
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||||||||  ||| || | ||| ||||| ||| ||||||||||| ||||||  |||  |||||||||||| || |||||||||    
T  50002421 gaatgagagggatcatgaggccgtgtaggcatgggactacatggttgaaggaaggcttataagaattgtttggtactacctttatcaacaagat 50002328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 371
Target Start/End: Original strand, 7548102 - 7548194
Alignment:
Q  279 aatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||||||||||||  ||| || ||||||||||| |||||| |||||||  ||||||  |||  |||||| || ||||| |||||||||    
T  7548102 aatgagagggatcatgaggccgtgtaggtatgagactacatgattaaaggaagacttataaaaattgtttggtattaactatatcaacaagat 7548194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 35761050 - 35760957
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||  |||  | ||||||||||  ||| ||||||||| | ||||||  |||  ||||||||||||||| |||||||||    
T  35761050 gaatgagagggatcctgaggccgtgcaggtatgagactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagat 35760957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 52250216 - 52250309
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||||||||  | | || ||||| ||||| ||| | ||||||||| ||||||  |||  | ||||||||||||| |||||||||    
T  52250216 gaatgagagggatcatgaggccttgtaggtatgggactacatggtcgaaggaaggcttataagaattgttgggtactacctatatcaacaagat 52250309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 843068 - 843016
Alignment:
Q  279 aatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaag 331  Q
    ||||||||||||||||||||||| || ||||| | ||  ||||||||||||||    
T  843068 aatgagagggatcatgagatcgtgtaggtatgtgtctgcatgattgaaggaag 843016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 371
Target Start/End: Complemental strand, 24182382 - 24182288
Alignment:
Q  277 agaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||||||||| ||||| |||  ||||||||||| | ||| ||||||||||| ||||||  |||| ||||||||| |||||||||||||||    
T  24182382 agaatgagagggatcttgagaacgtgcaagtatgagacgaaatggttgaaggaaggcttataagaattatttggtactatctataccaacaagat 24182288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 10927086 - 10926989
Alignment:
Q  274 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||||||| |||| |||| || ||||| ||||| ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  10927086 atcagaatgagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 10926989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 10927539 - 10927446
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||  ||| || ||||||||||| ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  10927539 gaatgagagggatcttgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 10927446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 189078 - 189171
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||  |||| | ||||| ||||  ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  189078 gaatgagagggatcctgaggccgtacatgtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 189171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 2193826 - 2193919
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||||||||  | | || ||||| ||||| ||| ||||||||||| ||||||  |||  | ||||||||||||| |||||||||    
T  2193826 gaatgagagggatcatgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagat 2193919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 8642174 - 8642077
Alignment:
Q  274 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||||||| | ||  |||  | ||||| ||||  ||| ||||||||||| ||||||  |||| ||||||||||||||| |||||||||    
T  8642174 atcagaatgagagggatcctaaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagat 8642077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 11160817 - 11160724
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||||||||||||  |||| || |||||| |||| ||  ||||||||||| ||||||| |||  ||||||||| ||||  |||||||||    
T  11160817 gaatgagagggatcatgaagtcgtgtaggtatgacactacatagttgaaggaaggcttataataattgtttggtactatctatgtcaacaagat 11160724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 20039610 - 20039517
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||||||||  ||| || ||||  ||||| ||  ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  20039610 gaatgagagggatcatgaggccgtgtaggtataggactacatagttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 20039517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 371
Target Start/End: Complemental strand, 17445590 - 17445498
Alignment:
Q  279 aatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||||||| ||||  ||| || | ||| ||||| ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  17445590 aatgagagggatcctgaggccgtgtaggcatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 17445498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 371
Target Start/End: Original strand, 1821944 - 1822009
Alignment:
Q  306 gtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||||  ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  1821944 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 1822009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 2473969 - 2474062
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| | || ||||| | | ||||||||  ||| ||||||||||| ||||||  |||  |||||||| |||||| |||||||||    
T  2473969 gaatgagagggatcctaaggtcgtacaggcatgagactgcatggttgaaggaaggcttataagaattgtttggtactgcctatatcaacaagat 2474062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 3886737 - 3886644
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| |||| ||||| ||||||| ||||  ||| | ||||||| | |||||   |||  ||||||||||||||| |||||||||    
T  3886737 gaatgagagggatcctgaggtcgtacaagtatgggactgcatggtagaaggaatgcttatatgaattgtttggtactacctatatcaacaagat 3886644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 371
Target Start/End: Original strand, 42515550 - 42515647
Alignment:
Q  274 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||||||| ||||  ||| || ||||||||||| ||| ||||||||||| ||||||  | |  ||||||||||||||| |||||||||    
T  42515550 atcagaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaagtgtttggtactacctatatcaacaagat 42515647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 6747734 - 6747641
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||  ||| || |||||| |||| ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  6747734 gaatgagagggatcctgaggccgtgtaggtatgatactacatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagat 6747641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 371
Target Start/End: Original strand, 679823 - 679919
Alignment:
Q  274 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||||||| |||| |||| || ||||| || || |||  |||||||||| |||||| || |  ||||||||||||||| |||||||||    
T  679823 atcagaatgagagggatcctgaggtcgtgtaggtatgggagtacatggctgaaggaaggcttataa-gaattgttggtactacctatatcaacaagat 679919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 2611788 - 2611695
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||||| || |||| || | || ||||||||||||||| | ||||||||| ||||||  |||  ||||||||| ||||| |||||||||    
T  2611788 gaatgagaggggtcctgaggtcatgtaggtatgagactatatggtggaaggaaggcttataagaattgtttggtactatctataacaacaagat 2611695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 2941897 - 2941800
Alignment:
Q  274 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||||||| ||||  |||| | ||||| ||||  ||| ||||||||||| | ||||  |||  ||||||||||||||| |||||||||    
T  2941897 atcagaatgagagggatcctgaggccgtacaggtatgggactgcatggttgaaggaaggctgataagaattgtttggtactacctatatcaacaagat 2941800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 42515102 - 42515195
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||  |||  | ||||||||||  ||||||||||||||  ||||||  |||  ||||||||||||||| |||||||||    
T  42515102 gaatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaaggaagacttataagaattgtttggtactacctatatcaacaagat 42515195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 368
Target Start/End: Complemental strand, 30572724 - 30572661
Alignment:
Q  304 aagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaa 368  Q
    ||||| ||||||||||||||||||||||| | |||| |||| || | ||||||||||||||||||    
T  30572724 aagtacgagactatatgattgaaggaagg-tcataaggattgatcgatactacctataccaacaa 30572661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 2193266 - 2193359
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||||| || ||||| |||  | ||||| ||||  ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  2193266 gaatgagagggttcctgagaccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 2193359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 6719210 - 6719117
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||   || || ||||| ||||| ||| ||||||||| | ||||||  |||  ||||||||||||||| |||||||||    
T  6719210 gaatgagagggatcctgaggctgtgtaggtatgggactacatggttgaaggaatgcttataagaattgtttggtactacctatatcaacaagat 6719117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 25182371 - 25182464
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||| |||| |||||  ||  ||||||||||||  ||| ||||||||||  ||||||  |||  ||||||||||||||| |||||||||    
T  25182371 gaatgagagagatcctgagactgtgcaagtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagat 25182464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 28495864 - 28495957
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||  ||| || ||||| ||||| ||| ||||||||||| ||||||  | |  | ||||||||||||| |||||||||    
T  28495864 gaatgagagggatcttgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaactgttgggtactacctatatcaacaagat 28495957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 279 - 371
Target Start/End: Original strand, 43233424 - 43233516
Alignment:
Q  279 aatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||||||||||||  ||| || ||||| |||| |||| || |||||||  ||||||  |||  ||||||||| ||||| |||||||||    
T  43233424 aatgagagggatcatgaggccgtgtaggtatgtgactgtatggttaaaggaagacttataagaattgtttggtactatctatatcaacaagat 43233516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 21220465 - 21220368
Alignment:
Q  274 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||||||||||||  | | || |||||| |||||||| ||||||||| | ||||||  |||  ||||||||||||||| |||||||||    
T  21220465 atcagaatgagagggatcatgaggccatgtaggtatgaaactatatggttgaaggaatgcttataagaattgtttggtactacctatatcaacaagat 21220368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 368
Target Start/End: Complemental strand, 31817523 - 31817438
Alignment:
Q  283 agagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaa 368  Q
    |||||||||||||| ||||  | ||||||||||  ||| ||||||||| ||||||||| |||  ||||||||||||||||||||||    
T  31817523 agagggatcatgaggtcgtgcatgtatgagacttcatggttgaaggaacgtttataataattgtttggtactacctataccaacaa 31817438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 4128019 - 4127926
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||  | | || | ||||||||||||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  4128019 gaatgagagggatcctgaggccatgtaggcatgagactatatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 4127926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 8467934 - 8467837
Alignment:
Q  274 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||| ||||||| |||||  ||  | ||||||||||| ||| ||||||||||  ||||||  |||  |||||||||||||||||||||||||    
T  8467934 atcagaatgaaagggatcctgagactgtgcaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctataccaacaagat 8467837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 278 - 367
Target Start/End: Complemental strand, 50399123 - 50399034
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaaca 367  Q
    |||||||||||||| ||||| ||| || |||||||| || ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||    
T  50399123 gaatgagagggatcctgagaccgtgtaggtatgagattacatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 50399034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 371
Target Start/End: Complemental strand, 29628796 - 29628704
Alignment:
Q  279 aatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||||||| ||||  ||| || ||||||||||| ||| ||||||||||  ||||||  |||  ||||||||||||||| |||||||||    
T  29628796 aatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagat 29628704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 3169216 - 3169309
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||| ||||||||  ||| || ||||| ||||| ||| ||||||||||  ||||||  |||  ||||||||||||||| |||||||||    
T  3169216 gaatgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagat 3169309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 9423988 - 9423895
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| |||| ||||  | ||||| ||||  ||| ||||| ||||| ||||||| |||  ||||||||||||||| |||||||||    
T  9423988 gaatgagagggatcctgaggtcgtgcatgtatgggactgcatggttgaaagaaggcttataataattgtttggtactacctatatcaacaagat 9423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 44471455 - 44471362
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||| |||| ||||  |||| | ||||||||||| ||| ||||||||||  ||||||  |||  ||||||||||||||| |||||||||    
T  44471455 gaatgagagagatcttgaggccgtacaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagat 44471362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 50398668 - 50398575
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||  ||| || ||||  ||||| ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  50398668 gaatgagagggatcctgaggccgtgtaggtataggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 50398575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 51331411 - 51331318
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||| ||||||||  ||| || ||||| ||||| ||| ||||||||||| ||||||  |||  ||||||||| ||||| |||||||||    
T  51331411 gaatgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactatctatatcaacaagat 51331318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 45682242 - 45682306
Alignment:
Q  307 tatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||| ||||| ||||||||| ||||||||||||  |||| |||||| || |||||||||||||||    
T  45682242 tatgggactacatgattgaatgaaggtttataagaattatttggtattatctataccaacaagat 45682306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 371
Target Start/End: Original strand, 1464153 - 1464250
Alignment:
Q  274 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||||||||||||||| || ||| || |||||||| || ||  ||||| |||   ||||||  |||  ||||||||||||||| |||||||||    
T  1464153 atcagaatgagagggatcatgcgaccgtgtaggtatgagaatacatagttgaaagaaaacttataagaattgtttggtactacctatatcaacaagat 1464250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 14572280 - 14572187
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||  | | || ||||| ||||| ||| ||||||| ||| ||||||  |||  ||||||||||||||| |||||||||    
T  14572280 gaatgagagggatcctgaggccatgtaggtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagat 14572187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 21067292 - 21067385
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||||||||  ||| ||||  | ||||||||||  ||| ||||||||||  | ||||| |||| |||||||||| |||| |||||||||    
T  21067292 gaatgagagggatcccgaggtcgtgcatgtatgagactgcatggttgaaggaagactaataataattatttggtactacatatatcaacaagat 21067385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 44471004 - 44470911
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||| ||||||||    ||| ||||||| |||| |||| ||||| ||||| ||||||  |||  ||||||||||||||| |||||||||    
T  44471004 gaatgagagagatcatgacgctgtacaagtatgtgactgtatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagat 44470911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 371
Target Start/End: Complemental strand, 25230380 - 25230291
Alignment:
Q  282 gagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||| |||| |||| || ||||| ||||| ||| ||||||||||| ||||||  |||| ||||||||||||||| |||||||||    
T  25230380 gagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagat 25230291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 25230841 - 25230748
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||  | | || ||||||||||| ||| ||||||||||||||||||  |||  ||||||||||||||| |||||||||    
T  25230841 gaatgagagggatcctgaggccatgtaggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagat 25230748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 371
Target Start/End: Complemental strand, 25237967 - 25237878
Alignment:
Q  282 gagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||| |||| |||| || ||||| ||||| ||| ||||||||||| ||||||  |||| ||||||||||||||| |||||||||    
T  25237967 gagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagat 25237878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 25238428 - 25238335
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||  | | || ||||||||||| ||| ||||||||||||||||||  |||  ||||||||||||||| |||||||||    
T  25238428 gaatgagagggatcctgaggccatgtaggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagat 25238335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 280 - 371
Target Start/End: Complemental strand, 25239211 - 25239120
Alignment:
Q  280 atgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||  |||| |||| || ||||| ||||||||| ||||||||| | ||||||  |||  ||||||||||||||| |||||||||    
T  25239211 atgagagggattctgaggtcgtgtaggtatgggactatatggttgaaggaacgcttataagaattttttggtactacctatatcaacaagat 25239120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 30529697 - 30529790
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||   || || ||||||||||| ||| |||||| |||| ||||||  |||  ||||||||||||||| |||||||||    
T  30529697 gaatgagagggatcctgaggctgtgtaggtatgagactacatggttgaagtaaggcttataagaattttttggtactacctatatcaacaagat 30529790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 31284412 - 31284319
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| |||| ||||  | ||||| ||||  ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  31284412 gaatgagagggatcttgaggtcgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 31284319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 371
Target Start/End: Complemental strand, 20885252 - 20885160
Alignment:
Q  279 aatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||||||| |||| |||| || ||||| ||||| ||| ||||||||||  ||||||  |||  ||| ||||||||||| |||||||||    
T  20885252 aatgagagggatcttgaggtcgtgtaggtatgtgactacatggttgaaggaagacttataagaattgtttgatactacctatatcaacaagat 20885160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 11180170 - 11180077
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||  | | || ||||| ||||| ||| ||||||||||| ||||||  |||  | ||||||||||||| |||||||||    
T  11180170 gaatgagagggatcctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagat 11180077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 14813959 - 14814052
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||||| || ||||  ||| || ||||||||||  ||| || |||||||| ||||||| |||  ||||||||||||||| ||| |||||    
T  14813959 gaatgagagggttcctgaggccgtgtaggtatgagactgcatggttaaaggaaggcttataataattgtttggtactacctatatcaataagat 14814052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 371
Target Start/End: Original strand, 39640943 - 39641040
Alignment:
Q  274 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||||||| |||| ||||  ||| || ||||||||||| ||| ||||||||||  ||||||   ||  ||||||||||||||| ||| |||||    
T  39640943 atcagaatgagagagatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagagttgtttggtactacctatatcaataagat 39641040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 41472311 - 41472403
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| |||| ||||| | ||||||||||  ||| ||||||||| | ||||||  |||  |||||||||| |||| |||||||||    
T  41472311 gaatgagagggatcctgaggtcgtacaggtatgagactgcatggttgaaggaa-gcttataagaattgtttggtactacatatatcaacaagat 41472403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 50347756 - 50347849
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||  | | || |||||||||||  || ||||||||||| ||||||  |||  | ||||||||||||| |||||||||    
T  50347756 gaatgagagggatcctgaggccttgtatgtatgagactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagat 50347849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1138 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 207 - 371
Target Start/End: Complemental strand, 904 - 740
Alignment:
Q  207 atggcacatgcaatgagctgctcctgacatgcttctaggaaattgacaaatgaatgaaccaatttatatcagaatgagagggatcatgagatcgtataag 306  Q
    ||||||| | |||||||| |||| ||||||||||||||  |    ||| ||| ||||| ||| | | |||||||||||||||  ||| |||||||||| |    
T  904 atggcacgtacaatgagcggctcttgacatgcttctagacacggaacatatggatgaatcaaatcacatcagaatgagagggtgcataagatcgtatagg 805  T
Q  307 tatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||| |||||| |||||||| |  |||||  ||||||| |||||||| || | |||||||||    
T  804 tatgagattatatggttgaaggaggacttatatggattaatcggtactacatacatcaacaagat 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 34308615 - 34308522
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||| ||||||| ||||  |||| |||||||||||| |||| ||||||||||| ||||||  | |  ||||||||||||||| |||||||||    
T  34308615 gaatgaaagggatcctgaggccgtacaagtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctatatcaacaagat 34308522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 278 - 361
Target Start/End: Complemental strand, 34309075 - 34308992
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctata 361  Q
    |||||||||||||| ||||  |||| |||||||||||| |||| ||||||||||| ||||||  | |  |||||||||||||||    
T  34309075 gaatgagagggatcctgaggccgtacaagtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctata 34308992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 368
Target Start/End: Complemental strand, 27819386 - 27819292
Alignment:
Q  274 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaa 368  Q
    ||||||||||||||||||||||  || |  ||||||||||||  ||| ||||||||||| | ||||  |||  ||||||||||||||| ||||||    
T  27819386 atcagaatgagagggatcatgaagtcatgcaagtatgagacttcatggttgaaggaaggctaataagaattgtttggtactacctatatcaacaa 27819292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 2044068 - 2044161
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||   || || ||||||||||| ||| ||||||||||| ||||||  |||  ||| ||||||||||| |||||||||    
T  2044068 gaatgagagggatcctgaggctgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttgatactacctatatcaacaagat 2044161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 6465046 - 6464953
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||| ||||||||  ||| || |||||  |||| ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  6465046 gaatgagaggaatcatgaggccgtgtaggtatggaactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 6464953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 22705182 - 22705275
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| |||   ||| || ||||| ||||  ||||||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  22705182 gaatgagagggatcctgaagccgtgtaggtatgggactggatgattgaaggaagggttataagaattgtttggtactacctatatcaacaagat 22705275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 371
Target Start/End: Complemental strand, 28375189 - 28375097
Alignment:
Q  279 aatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||||||| ||||  |||  | ||||||||||  ||||||||||||||| ||||||  |||  ||||||||||||| | |||||||||    
T  28375189 aatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaaggaaggcttataagaattgtttggtactacctacatcaacaagat 28375097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 20896824 - 20896731
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| | ||  ||| || ||||||||||| ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  20896824 gaatgagagggatccttaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 20896731  T

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Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 31821828 - 31821735
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||||||||  | | || ||||||||||| ||| ||||||||| | ||||||  |||| ||||||||| ||||| |||||||||    
T  31821828 gaatgagagggatcatgaggccatgtaggtatgagactacatggttgaaggaatgcttataagaattatttggtactaactatatcaacaagat 31821735  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 306 - 371
Target Start/End: Original strand, 13492827 - 13492892
Alignment:
Q  306 gtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||||  ||| ||||||||||| ||||||| |||  ||||||||||||||| |||||||||    
T  13492827 gtatgagactgcatggttgaaggaaggcttataataattgtttggtactacctatatcaacaagat 13492892  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 278 - 368
Target Start/End: Complemental strand, 6331048 - 6330958
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaa 368  Q
    |||||||| ||||| ||||  ||| || ||||||||||| ||| ||||||||||  ||||||  |||  ||||||||||||||| ||||||    
T  6331048 gaatgagatggatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaa 6330958  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 371
Target Start/End: Original strand, 20735701 - 20735798
Alignment:
Q  274 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||| ||||||||||||| |||||  || || ||||| ||||| ||||||| ||||||| ||||||  |||  ||| |||||| |||| |||||||||    
T  20735701 atcataatgagagggatcttgagactgtgtaggtatgtgactacatgattgtaggaaggcttataagaattgtttgatactacttatatcaacaagat 20735798  T

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Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 322 - 374
Target Start/End: Complemental strand, 17027623 - 17027571
Alignment:
Q  322 ttgaaggaaggtttataatgattaattggtactacctataccaacaagattca 374  Q
    ||||||||||| ||||||  |||  ||||||||||||||| ||||||||||||    
T  17027623 ttgaaggaaggcttataagaattgtttggtactacctatatcaacaagattca 17027571  T

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Target: scaffold0047 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 367
Target Start/End: Complemental strand, 17738 - 17645
Alignment:
Q  274 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaaca 367  Q
    |||||||||||||||||| ||||  ||| || ||||| ||||| ||| ||||||||| | ||||||  |||  ||||||||||||||| |||||    
T  17738 atcagaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 17645  T

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Target: scaffold0168 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 371
Target Start/End: Original strand, 2753 - 2845
Alignment:
Q  279 aatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||||||| ||||  ||| || ||||| ||||| ||| ||||||||||| ||||||  |||  | ||||||||||||| |||||||||    
T  2753 aatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagat 2845  T

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Target: scaffold0499 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 371
Target Start/End: Complemental strand, 2159 - 2094
Alignment:
Q  306 gtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||||||||  ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  2159 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 2094  T

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Target: scaffold0040 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 371
Target Start/End: Complemental strand, 2318 - 2253
Alignment:
Q  306 gtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    ||||| ||||| ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  2318 gtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 2253  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 142410 - 142317
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||  |||  | ||||| ||||  ||| ||||||||| ||||||||  |||  ||||||||||||||| |||||||||    
T  142410 gaatgagagggatcctgaggccgtgcaggtatgggacttcatggttgaaggaatgtttataagaattgtttggtactacctatatcaacaagat 142317  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 245096 - 245189
Alignment:
Q  278 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 371  Q
    |||||||||||||| ||||  | | || ||||| ||||| ||| ||||||| ||| ||||||  |||  ||||||||||||||| |||||||||    
T  245096 gaatgagagggatcctgaggccatgtaggtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagat 245189  T

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Target: scaffold0322 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 322 - 374
Target Start/End: Original strand, 19020 - 19072
Alignment:
Q  322 ttgaaggaaggtttataatgattaattggtactacctataccaacaagattca 374  Q
    ||||||||||| ||||||  |||  ||||||||||||||| ||||||||||||    
T  19020 ttgaaggaaggcttataagaattgtttggtactacctatatcaacaagattca 19072  T

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