View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4019_low_4 (Length: 235)
Name: NF4019_low_4
Description: NF4019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4019_low_4 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 42162073 - 42161966
Alignment:
| Q |
112 |
caaaaccacaccaacccctaactcttcctccgttaataacaactccttcacttcctttaaaaactctccatgaagtgccacgtcacgttcatcaaataca |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42162073 |
caaaaccacaccaacccctaactcttcctccgttaataacaactccttcacttcctttaaaaactctccatgaagtgccacgtcacgttcatcaaataca |
42161974 |
T |
|
| Q |
212 |
accctatg |
219 |
Q |
| |
|
|||||||| |
|
|
| T |
42161973 |
accctatg |
42161966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University