View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4020_high_11 (Length: 383)

Name: NF4020_high_11
Description: NF4020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4020_high_11
NF4020_high_11
[»] chr8 (48 HSPs)
chr8 (38-362)||(7466223-7466547)
chr8 (38-362)||(18305955-18306279)
chr8 (33-362)||(14782119-14782458)
chr8 (34-362)||(44725794-44726132)
chr8 (97-362)||(32497472-32497737)
chr8 (36-362)||(18958711-18959047)
chr8 (36-362)||(19717865-19718201)
chr8 (36-362)||(42305779-42306105)
chr8 (38-362)||(16362084-16362408)
chr8 (36-362)||(9288441-9288770)
chr8 (45-362)||(39467452-39467778)
chr8 (34-357)||(10295369-10295703)
chr8 (38-362)||(31623583-31623897)
chr8 (36-362)||(4402993-4403329)
chr8 (39-362)||(26855957-26856289)
chr8 (36-330)||(4031294-4031578)
chr8 (43-352)||(41478990-41479299)
chr8 (141-362)||(43166674-43166905)
chr8 (175-362)||(37857144-37857331)
chr8 (35-352)||(26374424-26374749)
chr8 (37-352)||(2704813-2705138)
chr8 (97-352)||(43959605-43959859)
chr8 (33-352)||(5576614-5576943)
chr8 (36-352)||(42735271-42735597)
chr8 (45-352)||(42938111-42938428)
chr8 (141-352)||(24501807-24502028)
chr8 (38-352)||(23115163-23115486)
chr8 (43-352)||(7506893-7507212)
chr8 (147-337)||(10392246-10392446)
chr8 (139-362)||(39189800-39190030)
chr8 (42-195)||(43166809-43166962)
chr8 (43-327)||(32711313-32711595)
chr8 (141-352)||(42937344-42937563)
chr8 (40-199)||(32497373-32497532)
chr8 (42-183)||(39189944-39190085)
chr8 (223-296)||(41070018-41070091)
chr8 (222-293)||(13478313-13478384)
chr8 (42-89)||(43308546-43308593)
chr8 (139-199)||(29930843-29930904)
chr8 (222-361)||(4950000-4950150)
chr8 (228-291)||(8410463-8410526)
chr8 (33-83)||(8543402-8543452)
chr8 (33-83)||(24502044-24502094)
chr8 (39-89)||(37857092-37857142)
chr8 (138-211)||(9770962-9771035)
chr8 (141-206)||(32497432-32497497)
chr8 (231-279)||(9770497-9770545)
chr8 (34-82)||(9771089-9771137)
[»] chr4 (83 HSPs)
chr4 (34-362)||(30967294-30967622)
chr4 (34-362)||(5441287-5441625)
chr4 (34-362)||(27767939-27768277)
chr4 (38-362)||(54341031-54341365)
chr4 (33-362)||(51320803-51321142)
chr4 (32-362)||(54853453-54853793)
chr4 (36-361)||(37828388-37828721)
chr4 (42-362)||(49501504-49501828)
chr4 (42-362)||(49507569-49507893)
chr4 (141-362)||(23987204-23987425)
chr4 (44-362)||(49834818-49835126)
chr4 (42-349)||(50018142-50018449)
chr4 (34-362)||(5799861-5800189)
chr4 (40-359)||(32321980-32322309)
chr4 (38-362)||(12913110-12913435)
chr4 (141-362)||(37915817-37916048)
chr4 (141-362)||(32683993-32684203)
chr4 (141-361)||(36479228-36479447)
chr4 (38-291)||(29649733-29649986)
chr4 (175-361)||(28483923-28484108)
chr4 (43-352)||(31314737-31315042)
chr4 (41-341)||(41725015-41725322)
chr4 (228-356)||(56445346-56445474)
chr4 (38-357)||(40537150-40537464)
chr4 (222-362)||(48261198-48261348)
chr4 (38-352)||(25331018-25331342)
chr4 (36-352)||(41881077-41881405)
chr4 (36-211)||(20021229-20021404)
chr4 (38-340)||(22201902-22202214)
chr4 (147-352)||(1112889-1113104)
chr4 (49-352)||(32950831-32951144)
chr4 (147-352)||(46635643-46635852)
chr4 (34-340)||(1044693-1045006)
chr4 (34-291)||(28541581-28541838)
chr4 (141-362)||(44770841-44771070)
chr4 (149-349)||(55302841-55303051)
chr4 (141-291)||(9163066-9163216)
chr4 (141-352)||(12112935-12113156)
chr4 (38-352)||(39479350-39479676)
chr4 (142-352)||(34228578-34228798)
chr4 (38-352)||(30009672-30009996)
chr4 (37-201)||(37915671-37915835)
chr4 (138-340)||(39307260-39307472)
chr4 (43-352)||(37046445-37046766)
chr4 (141-352)||(7007364-7007585)
chr4 (272-361)||(8711997-8712086)
chr4 (30-326)||(19740929-19741234)
chr4 (38-198)||(29855569-29855728)
chr4 (175-352)||(42786708-42786895)
chr4 (141-340)||(3436583-3436792)
chr4 (272-356)||(24736466-24736550)
chr4 (43-352)||(24130976-24131286)
chr4 (141-280)||(28370914-28371053)
chr4 (38-271)||(23464840-23465075)
chr4 (147-318)||(25446047-25446227)
chr4 (141-291)||(53275829-53275979)
chr4 (222-359)||(41320881-41321030)
chr4 (265-357)||(11090428-11090520)
chr4 (138-340)||(41581796-41582007)
chr4 (273-360)||(36727937-36728023)
chr4 (36-195)||(23987141-23987300)
chr4 (97-291)||(25504705-25504899)
chr4 (222-317)||(7249795-7249900)
chr4 (34-89)||(56445632-56445687)
chr4 (33-161)||(11090273-11090401)
chr4 (141-210)||(11090339-11090408)
chr4 (141-206)||(37915733-37915798)
chr4 (41-89)||(467773-467821)
chr4 (227-352)||(27454073-27454208)
chr4 (42-89)||(24736335-24736382)
chr4 (38-89)||(28483870-28483921)
chr4 (38-89)||(34141634-34141685)
chr4 (141-237)||(46635804-46635900)
chr4 (138-203)||(7007318-7007384)
chr4 (41-195)||(32684108-32684261)
chr4 (141-237)||(1112841-1112937)
chr4 (34-89)||(6334463-6334518)
chr4 (34-89)||(6335413-6335468)
chr4 (99-194)||(39307374-39307469)
chr4 (141-183)||(42786716-42786758)
chr4 (141-203)||(7249968-7250031)
chr4 (36-89)||(36728080-36728133)
chr4 (38-83)||(42786654-42786699)
[»] chr6 (23 HSPs)
chr6 (34-362)||(31895579-31895917)
chr6 (36-362)||(14262417-14262753)
chr6 (38-340)||(34773296-34773608)
chr6 (141-361)||(30385054-30385272)
chr6 (141-362)||(34759034-34759266)
chr6 (225-362)||(31067567-31067704)
chr6 (144-362)||(7497069-7497296)
chr6 (34-352)||(6197472-6197800)
chr6 (242-362)||(4200421-4200541)
chr6 (38-361)||(2300722-2301056)
chr6 (33-352)||(1391506-1391835)
chr6 (50-293)||(7051744-7051987)
chr6 (36-352)||(29076482-29076810)
chr6 (36-352)||(29111455-29111784)
chr6 (147-332)||(28002661-28002856)
chr6 (141-283)||(3848202-3848342)
chr6 (38-195)||(7497005-7497162)
chr6 (32-83)||(30385290-30385341)
chr6 (142-251)||(656957-657065)
chr6 (141-206)||(28002613-28002678)
chr6 (308-352)||(2238678-2238722)
chr6 (143-206)||(3848114-3848177)
chr6 (32-83)||(34759284-34759334)
[»] chr1 (59 HSPs)
chr1 (34-362)||(6312451-6312789)
chr1 (35-362)||(25612035-25612372)
chr1 (32-362)||(48177447-48177787)
chr1 (38-362)||(29396373-29396707)
chr1 (34-362)||(15835038-15835376)
chr1 (34-361)||(9322486-9322823)
chr1 (34-362)||(29219165-29219491)
chr1 (46-362)||(18798380-18798686)
chr1 (36-362)||(28387378-28387714)
chr1 (38-362)||(46327923-46328257)
chr1 (99-362)||(51701522-51701795)
chr1 (141-362)||(38536084-38536305)
chr1 (141-362)||(38558302-38558523)
chr1 (38-362)||(45272468-45272790)
chr1 (41-336)||(5495117-5495412)
chr1 (45-362)||(48668770-48669084)
chr1 (33-279)||(49230762-49231008)
chr1 (38-361)||(9577418-9577751)
chr1 (37-242)||(8141243-8141448)
chr1 (37-359)||(21222028-21222361)
chr1 (38-352)||(28824368-28824691)
chr1 (43-340)||(35279558-35279865)
chr1 (36-352)||(45760004-45760331)
chr1 (34-350)||(35679125-35679451)
chr1 (97-352)||(19451803-19452068)
chr1 (33-352)||(50192545-50192875)
chr1 (37-359)||(33025392-33025716)
chr1 (141-359)||(37014628-37014856)
chr1 (43-352)||(49198264-49198581)
chr1 (142-352)||(6304247-6304468)
chr1 (36-244)||(22183249-22183457)
chr1 (141-352)||(47780695-47780916)
chr1 (37-291)||(730029-730283)
chr1 (43-352)||(47654346-47654668)
chr1 (34-337)||(32588963-32589277)
chr1 (141-327)||(45535928-45536124)
chr1 (45-340)||(49417972-49418277)
chr1 (141-313)||(47784371-47784542)
chr1 (38-201)||(953700-953863)
chr1 (36-126)||(42290723-42290813)
chr1 (225-340)||(31572204-31572329)
chr1 (37-203)||(19452004-19452170)
chr1 (141-318)||(48524303-48524490)
chr1 (99-289)||(29556046-29556236)
chr1 (225-289)||(31622527-31622591)
chr1 (230-303)||(955823-955896)
chr1 (36-185)||(14494091-14494237)
chr1 (38-161)||(38536243-38536366)
chr1 (38-161)||(38558461-38558584)
chr1 (138-201)||(51701519-51701582)
chr1 (141-203)||(953761-953823)
chr1 (141-203)||(14494151-14494213)
chr1 (138-203)||(29556043-29556108)
chr1 (146-206)||(48524266-48524326)
chr1 (222-280)||(51085860-51085918)
chr1 (146-179)||(25831084-25831117)
chr1 (38-83)||(28541385-28541430)
chr1 (39-124)||(25831139-25831224)
chr1 (139-199)||(45535884-45535944)
[»] chr3 (88 HSPs)
chr3 (34-362)||(36674115-36674453)
chr3 (37-362)||(50762045-50762370)
chr3 (36-362)||(44906498-44906834)
chr3 (37-362)||(11431412-11431747)
chr3 (30-362)||(23753392-23753713)
chr3 (140-362)||(37454850-37455072)
chr3 (34-362)||(10660418-10660732)
chr3 (141-362)||(10728636-10728857)
chr3 (36-362)||(31646271-31646605)
chr3 (141-362)||(39038030-39038251)
chr3 (38-357)||(40897030-40897360)
chr3 (36-362)||(26107146-26107482)
chr3 (34-360)||(48379041-48379376)
chr3 (141-362)||(34484015-34484246)
chr3 (141-362)||(52810368-52810599)
chr3 (48-362)||(54628740-54629065)
chr3 (33-362)||(52617956-52618289)
chr3 (36-352)||(50903235-50903564)
chr3 (38-356)||(51737717-51738044)
chr3 (141-362)||(17946278-17946509)
chr3 (140-361)||(32580166-32580396)
chr3 (145-362)||(18749606-18749833)
chr3 (100-362)||(44276338-44276596)
chr3 (38-336)||(20832882-20833187)
chr3 (50-361)||(6035039-6035359)
chr3 (34-352)||(20498093-20498420)
chr3 (193-362)||(39842479-39842648)
chr3 (45-352)||(19253721-19254038)
chr3 (45-352)||(37820472-37820789)
chr3 (38-352)||(996081-996404)
chr3 (38-352)||(6589450-6589775)
chr3 (141-327)||(6975739-6975922)
chr3 (33-352)||(10139141-10139469)
chr3 (156-362)||(15492852-15493061)
chr3 (43-352)||(3206200-3206510)
chr3 (32-211)||(18749451-18749630)
chr3 (29-337)||(35337612-35337930)
chr3 (97-352)||(44762032-44762297)
chr3 (141-352)||(3999640-3999861)
chr3 (283-360)||(45862983-45863060)
chr3 (38-192)||(27240408-27240562)
chr3 (141-349)||(33807796-33808015)
chr3 (222-352)||(27899415-27899545)
chr3 (141-352)||(40246834-40247055)
chr3 (43-352)||(54625484-54625803)
chr3 (35-251)||(12103516-12103729)
chr3 (175-280)||(539481-539586)
chr3 (45-352)||(25418260-25418577)
chr3 (141-352)||(29448853-29449074)
chr3 (146-340)||(33996548-33996752)
chr3 (149-352)||(53929123-53929336)
chr3 (141-291)||(29029996-29030145)
chr3 (272-352)||(6131228-6131308)
chr3 (228-352)||(5825139-5825273)
chr3 (227-352)||(52080003-52080122)
chr3 (36-195)||(52810305-52810464)
chr3 (141-289)||(1440020-1440169)
chr3 (38-127)||(39842659-39842748)
chr3 (43-280)||(52114422-52114658)
chr3 (147-332)||(51699495-51699689)
chr3 (222-302)||(23535866-23535946)
chr3 (141-289)||(55235176-55235322)
chr3 (139-203)||(51699675-51699739)
chr3 (138-201)||(6131327-6131390)
chr3 (36-112)||(10728844-10728920)
chr3 (38-89)||(15493999-15494050)
chr3 (34-112)||(17946214-17946291)
chr3 (144-183)||(27899379-27899418)
chr3 (39-89)||(539649-539699)
chr3 (141-203)||(1440149-1440210)
chr3 (141-312)||(22057751-22057933)
chr3 (34-83)||(12734114-12734163)
chr3 (138-202)||(6131410-6131473)
chr3 (141-201)||(27240441-27240501)
chr3 (297-349)||(33807678-33807730)
chr3 (37-89)||(50901209-50901261)
chr3 (274-352)||(1439889-1439967)
chr3 (40-82)||(29029895-29029937)
chr3 (141-203)||(40246792-40246854)
chr3 (138-183)||(1440084-1440129)
chr3 (284-325)||(12103733-12103774)
chr3 (34-83)||(16010746-16010795)
chr3 (43-291)||(22057655-22057902)
chr3 (38-75)||(32580063-32580100)
chr3 (141-186)||(38772325-38772370)
chr3 (141-177)||(2024155-2024191)
chr3 (36-87)||(39037982-39038031)
chr3 (139-179)||(53929339-53929378)
[»] chr2 (43 HSPs)
chr2 (44-362)||(28740280-28740598)
chr2 (38-361)||(13833420-13833743)
chr2 (38-362)||(28844444-28844778)
chr2 (36-362)||(3463558-3463885)
chr2 (36-362)||(33135510-33135845)
chr2 (34-320)||(7026488-7026775)
chr2 (36-362)||(26788671-26789006)
chr2 (36-362)||(10657293-10657629)
chr2 (34-362)||(215225-215550)
chr2 (142-362)||(25288152-25288382)
chr2 (39-362)||(10125287-10125612)
chr2 (38-361)||(3574736-3575049)
chr2 (147-362)||(18177265-18177490)
chr2 (142-362)||(6224554-6224765)
chr2 (43-352)||(16269585-16269904)
chr2 (141-361)||(378929-379149)
chr2 (36-352)||(24776242-24776568)
chr2 (43-352)||(22551760-22552079)
chr2 (38-352)||(31170621-31170945)
chr2 (38-352)||(12407269-12407593)
chr2 (43-352)||(35316956-35317275)
chr2 (97-352)||(20605184-20605449)
chr2 (38-306)||(26601253-26601521)
chr2 (43-352)||(14198574-14198892)
chr2 (38-350)||(305464-305788)
chr2 (34-327)||(1789327-1789630)
chr2 (141-352)||(43847638-43847859)
chr2 (43-291)||(44765669-44765917)
chr2 (239-362)||(43078653-43078786)
chr2 (97-352)||(5093044-5093309)
chr2 (54-340)||(32125155-32125454)
chr2 (43-201)||(20605046-20605204)
chr2 (142-352)||(9120119-9120339)
chr2 (36-181)||(378866-379011)
chr2 (303-362)||(7027051-7027110)
chr2 (36-89)||(43825078-43825131)
chr2 (222-278)||(21370631-21370687)
chr2 (34-112)||(43078560-43078638)
chr2 (141-237)||(20605102-20605198)
chr2 (29-201)||(19144904-19145078)
chr2 (38-83)||(9120057-9120102)
chr2 (141-181)||(8172170-8172210)
chr2 (170-206)||(24193595-24193631)
[»] chr5 (33 HSPs)
chr5 (36-362)||(5948995-5949320)
chr5 (42-362)||(4240446-4240766)
chr5 (34-362)||(14000089-14000427)
chr5 (34-362)||(40013696-40014021)
chr5 (40-362)||(13925821-13926153)
chr5 (33-357)||(4550246-4550580)
chr5 (37-362)||(1152087-1152422)
chr5 (32-362)||(37013796-37014116)
chr5 (105-362)||(1461132-1461389)
chr5 (38-353)||(22746185-22746502)
chr5 (150-362)||(7947557-7947779)
chr5 (177-362)||(39852372-39852567)
chr5 (34-352)||(21146951-21147279)
chr5 (34-352)||(33656035-33656365)
chr5 (141-340)||(5272925-5273134)
chr5 (141-340)||(7016745-7016954)
chr5 (138-340)||(139261-139473)
chr5 (147-352)||(9220711-9220916)
chr5 (145-280)||(14465303-14465438)
chr5 (43-290)||(6460685-6460932)
chr5 (141-352)||(27458944-27459164)
chr5 (141-359)||(32157879-32158113)
chr5 (43-280)||(9689554-9689787)
chr5 (228-327)||(849225-849334)
chr5 (38-183)||(7016870-7017015)
chr5 (43-203)||(5273114-5273275)
chr5 (43-127)||(7948546-7948630)
chr5 (141-206)||(5273153-5273218)
chr5 (34-83)||(43319130-43319179)
chr5 (247-289)||(1511409-1511451)
chr5 (141-237)||(32158059-32158156)
chr5 (141-201)||(16894057-16894117)
chr5 (170-206)||(17518474-17518510)
[»] chr7 (77 HSPs)
chr7 (36-362)||(28342227-28342563)
chr7 (38-362)||(23101180-23101514)
chr7 (38-362)||(29614748-29615082)
chr7 (40-362)||(39783983-39784315)
chr7 (39-362)||(9882221-9882553)
chr7 (34-362)||(37327805-37328133)
chr7 (30-362)||(46405425-46405757)
chr7 (36-362)||(18838269-18838605)
chr7 (41-362)||(44121894-44122216)
chr7 (38-362)||(3022808-3023142)
chr7 (60-362)||(40460701-40461003)
chr7 (38-362)||(7993024-7993358)
chr7 (141-362)||(509641-509862)
chr7 (39-362)||(39027980-39028303)
chr7 (41-361)||(33382522-33382852)
chr7 (47-358)||(28034793-28035114)
chr7 (38-337)||(33892269-33892569)
chr7 (138-362)||(29585497-29585720)
chr7 (34-312)||(32883659-32883948)
chr7 (50-362)||(12740267-12740588)
chr7 (36-352)||(17001037-17001343)
chr7 (149-360)||(8675326-8675547)
chr7 (48-351)||(19251431-19251734)
chr7 (36-361)||(10068346-10068682)
chr7 (36-361)||(3797052-3797377)
chr7 (45-362)||(44256750-44257077)
chr7 (41-362)||(41827199-41827520)
chr7 (41-361)||(12963587-12963911)
chr7 (34-352)||(973068-973397)
chr7 (32-352)||(30440679-30441009)
chr7 (141-343)||(47066688-47066881)
chr7 (34-352)||(12893293-12893621)
chr7 (147-353)||(9179871-9180077)
chr7 (43-340)||(43581096-43581403)
chr7 (43-352)||(47914160-47914479)
chr7 (38-352)||(44343390-44343714)
chr7 (38-352)||(40996643-40996968)
chr7 (33-201)||(48117748-48117916)
chr7 (38-352)||(18914729-18915053)
chr7 (141-352)||(7719254-7719475)
chr7 (231-352)||(19810874-19810995)
chr7 (43-352)||(47879062-47879381)
chr7 (272-362)||(37972851-37972941)
chr7 (43-340)||(20275269-20275576)
chr7 (97-352)||(34695221-34695486)
chr7 (140-337)||(44623295-44623492)
chr7 (228-362)||(43187341-43187485)
chr7 (43-327)||(727406-727691)
chr7 (169-352)||(7718356-7718549)
chr7 (38-352)||(34008904-34009226)
chr7 (141-278)||(10676498-10676635)
chr7 (141-252)||(29893066-29893177)
chr7 (141-352)||(39219371-39219592)
chr7 (227-352)||(32142911-32143046)
chr7 (36-127)||(21067762-21067853)
chr7 (38-195)||(509580-509737)
chr7 (38-203)||(34695120-34695285)
chr7 (141-291)||(25805677-25805827)
chr7 (34-294)||(31638760-31639020)
chr7 (225-280)||(447852-447907)
chr7 (36-181)||(43187518-43187663)
chr7 (38-201)||(8078284-8078448)
chr7 (36-192)||(29893003-29893159)
chr7 (36-183)||(10676551-10676698)
chr7 (227-317)||(43679492-43679592)
chr7 (227-352)||(7113530-7113665)
chr7 (39-123)||(37973007-37973091)
chr7 (141-280)||(1470309-1470447)
chr7 (39-83)||(43679359-43679403)
chr7 (38-89)||(29585439-29585490)
chr7 (323-362)||(32883944-32883983)
chr7 (141-184)||(43187557-43187600)
chr7 (42-89)||(47066630-47066677)
chr7 (144-214)||(7113409-7113479)
chr7 (138-211)||(10616931-10617003)
chr7 (334-362)||(29893173-29893201)
chr7 (141-185)||(32143132-32143176)
[»] scaffold0543 (1 HSPs)
scaffold0543 (42-362)||(10452-10782)
[»] scaffold0110 (1 HSPs)
scaffold0110 (56-362)||(39602-39918)
[»] scaffold0306 (2 HSPs)
scaffold0306 (141-362)||(13873-14094)
scaffold0306 (36-195)||(13810-13969)
[»] scaffold0152 (3 HSPs)
scaffold0152 (141-362)||(21233-21454)
scaffold0152 (262-362)||(28463-28564)
scaffold0152 (36-195)||(21358-21517)
[»] scaffold1504 (1 HSPs)
scaffold1504 (37-352)||(750-1075)
[»] scaffold0922 (1 HSPs)
scaffold0922 (34-280)||(4084-4330)
[»] scaffold0042 (2 HSPs)
scaffold0042 (141-362)||(58061-58292)
scaffold0042 (38-127)||(58264-58353)
[»] scaffold0347 (2 HSPs)
scaffold0347 (258-362)||(14878-14982)
scaffold0347 (33-127)||(14778-14872)
[»] scaffold0400 (1 HSPs)
scaffold0400 (36-352)||(15028-15351)
[»] scaffold0365 (1 HSPs)
scaffold0365 (36-352)||(15671-15994)
[»] scaffold0037 (1 HSPs)
scaffold0037 (38-340)||(100099-100411)
[»] scaffold0054 (3 HSPs)
scaffold0054 (222-349)||(36905-37042)
scaffold0054 (141-195)||(37027-37081)
scaffold0054 (47-89)||(37091-37133)
[»] scaffold0004 (1 HSPs)
scaffold0004 (138-352)||(102081-102307)
[»] scaffold0839 (1 HSPs)
scaffold0839 (272-362)||(3677-3767)
[»] scaffold0113 (1 HSPs)
scaffold0113 (141-352)||(38890-39111)
[»] scaffold0151 (2 HSPs)
scaffold0151 (175-352)||(38600-38786)
scaffold0151 (43-83)||(38794-38834)
[»] scaffold0010 (6 HSPs)
scaffold0010 (98-208)||(233685-233795)
scaffold0010 (98-208)||(234533-234643)
scaffold0010 (98-208)||(222517-222627)
scaffold0010 (34-72)||(222469-222507)
scaffold0010 (34-72)||(233637-233675)
scaffold0010 (34-72)||(234485-234523)
[»] scaffold0276 (1 HSPs)
scaffold0276 (97-357)||(529-799)
[»] scaffold0651 (1 HSPs)
scaffold0651 (43-181)||(8655-8793)
[»] scaffold0492 (2 HSPs)
scaffold0492 (34-89)||(12041-12096)
scaffold0492 (42-83)||(11998-12039)


Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 38 - 362
Target Start/End: Original strand, 7466223 - 7466547
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||       |||||||||||||||| || ||||||||||| ||           
T  7466223 ggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 7466322  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||  ||       ||||||||||||||||    
T  7466323 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaa 7466422  T
Q  238 aatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 337  Q
    |||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7466423 aatcattcaaattttgaagaattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 7466522  T
Q  338 cttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||    
T  7466523 cttgagattgtttttcttttaaaag 7466547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 38 - 362
Target Start/End: Complemental strand, 18306279 - 18305955
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||||||||||| |||| |||||||||| |||||| ||||||||||||||||       |||||||||||||||| || ||||||||||| ||           
T  18306279 ggggatgtattgaattaggattctatggaattttagaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 18306180  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||||||    
T  18306179 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 18306080  T
Q  238 aatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 337  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18306079 aatcattcaaatttcgaaagattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 18305980  T
Q  338 cttgagattgtttttcttttaaaag 362  Q
    |||||||||||| ||||||||||||    
T  18305979 cttgagattgttattcttttaaaag 18305955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 33 - 362
Target Start/End: Complemental strand, 14782458 - 14782119
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||      
T  14782458 cttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaa 14782359  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
         || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       |||||||||||    
T  14782358 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 14782259  T
Q  233 ttcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 322  Q
    ||||||||||||||||||| |||  ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14782258 ttcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 14782159  T
Q  323 gaaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  14782158 gaaaagatgagatttcttgagattgtttttattttaaaag 14782119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 34 - 362
Target Start/End: Complemental strand, 44726132 - 44725794
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||       
T  44726132 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 44726033  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||    
T  44726032 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 44725933  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 323  Q
    |||||||||||||||||| |||  ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44725932 tcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 44725833  T
Q  324 aaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  44725832 aaaagatgagatttcttgagattgtttttattttaaaag 44725794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 97 - 362
Target Start/End: Original strand, 32497472 - 32497737
Alignment:
Q  97 tcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaat 196  Q
    |||||||||||||||| || ||||||||||| ||        | ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  32497472 tcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaat 32497571  T
Q  197 caagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgt 296  Q
    ||||| ||||||||| ||       ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32497572 caagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgtgggattttgtagtgt 32497671  T
Q  297 aattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32497672 aattttaacaagagaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaag 32497737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 36 - 362
Target Start/End: Complemental strand, 18959047 - 18958711
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||||||       |||||| ||||||||| || ||||||||||||||         
T  18959047 agggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtagtattcaatcaagactttttgcaatttaaaaa 18958948  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||||    
T  18958947 aagtcttgtggtattcaatcaagactctttatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 18958848  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    ||||||||||||||||||||  ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18958847 aaaatcattcaaatttcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 18958748  T
Q  326 aagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||| |||||| |||||||||||||| |||||||||    
T  18958747 aagattagattttttgagattgtttttgttttaaaag 18958711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 36 - 362
Target Start/End: Complemental strand, 19718201 - 19717865
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||| |||||||||||||| ||||||||||||||||||||||  ||||||||||       || || |||||||||| || ||||||||||||||         
T  19718201 agggagatgtattggattaggattctatgggattttaaaagaccttttaattatgaaaaagtcctgcggtattcaatcaagactttttgcaatttaaaaa 19718102  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||||    
T  19718101 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 19718002  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    ||||||||||||||||||||  ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19718001 aaaatcattcaaatttcgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaa 19717902  T
Q  326 aagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||||| |||||||||    
T  19717901 aagatgagatttcttgagattgtttttgttttaaaag 19717865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 36 - 362
Target Start/End: Complemental strand, 42306105 - 42305779
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||||||       ||||||| |||||||| || | ||||||||||||         
T  42306105 agggggatgtattggattaggattctatgtgattttaaaagactttttaattatgaaaaagtcttgtgatattcaatcaagaatttttgcaatttaaaaa 42306006  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||        |||||||||||||    
T  42306005 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattc 42305906  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 335  Q
    ||||| ||||||||||||||  |||||||||| |||||||||||   |||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  42305905 aaaataattcaaatttcgaaggattgtttaatcaattggattttaatggattttgtagtgtaattttaacaagaaaaagtcattcatgaaaaaatgagat 42305806  T
Q  336 ttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||| |||| ||||    
T  42305805 ttcttgagattgtttttgtttttaaag 42305779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 38 - 362
Target Start/End: Original strand, 16362084 - 16362408
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||||||||||       | |||||||||||||| || |||||||| || ||           
T  16362084 ggggatgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgtaacttaaaaaaa 16362183  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
     | ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| | ||       |||| |||||||||||    
T  16362184 atcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaa 16362283  T
Q  238 aatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 337  Q
    ||||||||||||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||| || ||||||||||||||    
T  16362284 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagattt 16362383  T
Q  338 cttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||    
T  16362384 cttgagattgtttttcttttaaaag 16362408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 36 - 362
Target Start/End: Complemental strand, 9288770 - 9288441
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||       |||||||||        || ||||||||||||||         
T  9288770 agggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtc-------aagactttttgcaatttaaaaa 9288678  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| ||       ||||||||||||||    
T  9288677 aagtcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattc 9288578  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaattgg----------attttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    ||||||||||||||||||||  |||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9288577 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 9288478  T
Q  326 aagatgagatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||||||||||||||    
T  9288477 aagatgagatttcttgagattgtttttcttttaaaag 9288441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 45 - 362
Target Start/End: Complemental strand, 39467778 - 39467452
Alignment:
Q  45 tattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgt 144  Q
    |||||||||| ||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||||||| ||| ||       || ||||    
T  39467778 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaa-gtcttgt 39467680  T
Q  145 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 244  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       |||||||||||||||||||||||    
T  39467679 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatt 39467580  T
Q  245 caaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 334  Q
    |||||||||||  ||||||||||||||          |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39467579 caaatttcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgaga 39467480  T
Q  335 tttcttgagattgtttttcttttaaaag 362  Q
    ||| ||||||||||||||||||||||||    
T  39467479 ttttttgagattgtttttcttttaaaag 39467452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 34 - 357
Target Start/End: Complemental strand, 10295703 - 10295369
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    |||||| |||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||       
T  10295703 ttagggagatgtattggattaggattctatgggattttaaaagagtttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaag 10295604  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || || ||| ||||||||||||||||| |||| || ||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||    
T  10295603 aaaagtcttctggcattcaatcaagactcttcgtcacttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 10295504  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaattggat-----------tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 322  Q
    ||||||||||||||||||||||  |||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||||||    
T  10295503 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 10295404  T
Q  323 gaaaagatgagatttcttgagattgtttttctttt 357  Q
    |||||||||||||||||||||||||||||| ||||    
T  10295403 gaaaagatgagatttcttgagattgtttttttttt 10295369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 38 - 362
Target Start/End: Original strand, 31623583 - 31623897
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||       |||||||| ||||||| || |||||||| || ||           
T  31623583 ggggatgtattggattaggattctatggaattttaaaagattttttaattatgaaaaagtcttgtggcattcaatcaagactttttgtaacttaaaaaaa 31623682  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || |  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||||||    
T  31623683 gtctcttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 31623782  T
Q  238 aatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 337  Q
    ||||||||||||||||||  |||||||||||||||          ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  31623783 aatcattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagataagattt 31623872  T
Q  338 cttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||    
T  31623873 cttgagattgtttttcttttaaaag 31623897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 36 - 362
Target Start/End: Original strand, 4402993 - 4403329
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||||||| |       |||| ||||||||||| || ||||||||||| ||         
T  4402993 agggggatgtattggattatgattatatgagattttaaaagactttttaattgtgaaaaagtcttttggtattcaatcaaaactttttgcaacttaaaaa 4403092  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || |||||||||||||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||| ||        ||| |||||||||    
T  4403093 aagtcttgtggtattcaatcaagactcattttcattttaaaaaaatcttgaagtattcaattaagatttttcatcacttaaaaaaaatctcgtggtattc 4403192  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaattgg----------attttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    ||||||||||||||||||||  |||||||||||||||||          ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4403193 aaaatcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtctttcatgaa 4403292  T
Q  326 aagatgagatttcttgagattgtttttcttttaaaag 362  Q
    || ||||||||||||| ||||||||||||||||||||    
T  4403293 aatatgagatttcttgggattgtttttcttttaaaag 4403329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 39 - 362
Target Start/End: Original strand, 26855957 - 26856289
Alignment:
Q  39 gggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnng 138  Q
    |||||||||||||||| ||||||||| |||||||||||| |||  ||||||       | |||||||||||||| || ||||||||||| ||            
T  26855957 gggatgtattggattaggattctatgagattttaaaagacttt--aattatgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaaa 26856054  T
Q  139 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtctt-gaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    | |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||| ||       ||||||||||||||||    
T  26856055 tattgtggtattcaatcaagactctttgtcattttaaaaaagtctttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 26856154  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    |||||||||||||||||| |||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  26856155 aatcattcaaatttcgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaa 26856254  T
Q  328 gatgagatttcttgagattgtttttcttttaaaag 362  Q
     || |||||||||||||||||||||||||||||||    
T  26856255 aataagatttcttgagattgtttttcttttaaaag 26856289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 36 - 330
Target Start/End: Complemental strand, 4031578 - 4031294
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||       ||||||||||||| || || ||||||||||||||         
T  4031578 agggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcgatcaagactttttgcaatttaaaaa 4031479  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||| | ||       ||||||||||||||    
T  4031478 aagtcttgtggtattcaatcaagaatctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtggtattc 4031379  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    ||||||||||||||||||||  |||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4031378 aaaatcattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 4031294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 43 - 352
Target Start/End: Original strand, 41478990 - 41479299
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       |||||    
T  41478990 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtttt 41479089  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       ||||  |||||||||||||||    
T  41479090 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatca 41479189  T
Q  243 ttcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 342  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||| ||||  ||||||| || |||||| ||||||||||||| ||||||||||||      
T  41479190 ttcaaatttcgaatgattgtttaataaatcagattttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttag 41479289  T
Q  343 gattgttttt 352  Q
    ||||||||||    
T  41479290 gattgttttt 41479299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 141 - 362
Target Start/End: Complemental strand, 43166905 - 43166674
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||| ||||  |||| ||||||||||||  |||||||||||||| | ||  ||||||       |||||||||||||||||||    
T  43166905 ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaaaat 43166806  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||||||||||||  |||||||||||||||||||||||          ||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  43166805 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaagat 43166706  T
Q  331 gagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||| ||||||||||||||    
T  43166705 gagatttcttgagattggttttcttttaaaag 43166674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 175 - 362
Target Start/End: Original strand, 37857144 - 37857331
Alignment:
Q  175 aaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattgg 274  Q
    ||||||| |||| ||||||||| |||||||||||||| ||       ||||||||||||||||| ||||||||||||  ||  |||||||||||||||||    
T  37857144 aaaaagttttgaggtattcaattaagatttttcatcacttaaaaaaagtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattgg 37857243  T
Q  275 attttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||  ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37857244 attttgatggattttgtagtgtaatttgaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttcttttaaaag 37857331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 35 - 352
Target Start/End: Complemental strand, 26374749 - 26374424
Alignment:
Q  35 tagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnn 134  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||||| || ||       ||||||| |||||||| || ||| ||| ||||||        
T  26374749 tagggggatgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaa 26374650  T
Q  135 nnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtatt 234  Q
       ||| |||  ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||    
T  26374649 aaagttgtgt--tattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatt 26374552  T
Q  235 caaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 324  Q
    |||||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||    
T  26374551 caaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatga 26374452  T
Q  325 aaagatgagatttcttgagattgttttt 352  Q
    ||| ||||||||||||  ||||||||||    
T  26374451 aaacatgagatttcttaggattgttttt 26374424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 37 - 352
Target Start/End: Complemental strand, 2705138 - 2704813
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    ||||| |||||||||| |||||| ||  ||||||||||||||||||| || ||       |||||||||||||||| || ||| ||| ||| ||          
T  2705138 ggggggtgtattggatcatgattgtaaaggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaaattaaaaaa 2705039  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
     || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||    
T  2705038 agtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattca 2704939  T
Q  237 aaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 326  Q
    |||||||||||||||||||| ||||||||||||||          |||||||||||||||||| |||||  |||||| || |||||||||||||||||||    
T  2704938 aaatcattcaaatttcgaatgattgtttaataaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaa 2704839  T
Q  327 agatgagatttcttgagattgttttt 352  Q
    | ||||||||||||  ||||||||||    
T  2704838 acatgagatttcttaggattgttttt 2704813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 97 - 352
Target Start/End: Original strand, 43959605 - 43959859
Alignment:
Q  97 tcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaat 196  Q
    |||||||||||||||| || ||| ||| ||||||       || ||||| ||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  43959605 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcattttaaaaaagtcttgt-gtattcaat 43959703  T
Q  197 caagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgt 296  Q
    ||||||| || |||| ||       | || |||||||||||||||||||||||||||||| ||||||||||||||  |||||||  ||||||||| |||     
T  43959704 caagattcttaatcacttcaaaaaagactagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtggtga 43959803  T
Q  297 aattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 352  Q
    ||||||| || |||||||||||| || |||| ||||||||||||  ||||||||||    
T  43959804 aattttagcatgaaaaagtctttaattaaaacatgagatttcttatgattgttttt 43959859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 33 - 352
Target Start/End: Complemental strand, 5576943 - 5576614
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||  | ||       |||||||||||||||| || ||| ||| ||||||      
T  5576943 cttaggggg-tgtattggattatgattctaagggattttaaaagatttttttgtcatgaaatagtcttgtggtattcaatcaagactctttccaatttaa 5576845  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggt 231  Q
         || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||        |||  |||||    
T  5576844 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggt 5576745  T
Q  232 attcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 321  Q
    ||||||||||||||||||||||||  |||||||||||||           |||||||||||||||||| ||||| ||||||| || |||||||||||| |    
T  5576744 attcaaaatcattcaaatttcgaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttta 5576645  T
Q  322 tgaaaagatgagatttcttgagattgttttt 352  Q
    |||||| ||||||||||||  ||||||||||    
T  5576644 tgaaaacatgagatttcttaggattgttttt 5576614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 36 - 352
Target Start/End: Complemental strand, 42735597 - 42735271
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||         
T  42735597 aggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaa 42735498  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||| ||||||||||||| ||||| |||||| ||||||| ||||  ||||||||| |||| | || |||| ||       |||| |||||||||    
T  42735497 aagtcttgtgttattcaatcaagattctttatcatttaaaaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattc 42735398  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    |||||||||||||||||||| |||||||||||||||          |||||||||||||||||| ||||| ||||||| |  ||||||||||||||| ||    
T  42735397 aaaatcattcaaatttcgaagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaa 42735298  T
Q  326 aagatgagatttcttgagattgttttt 352  Q
    || ||||||||||||  ||||||||||    
T  42735297 aacatgagatttcttaggattgttttt 42735271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 45 - 352
Target Start/End: Complemental strand, 42938428 - 42938111
Alignment:
Q  45 tattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgt 144  Q
    ||||||||||| ||| || |||||||||||||| ||||| |  ||       |||||||||||||||| || ||| ||| ||||||       || ||||    
T  42938428 tattggattataattttaagggattttaaaagacttttttaccatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgt 42938329  T
Q  145 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 244  Q
    | ||||||||||||| | |||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||||    
T  42938328 gttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 42938229  T
Q  245 caaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 334  Q
    |||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| |  |||||||||||||||||||| ||||||    
T  42938228 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgaga 42938129  T
Q  335 tttcttgagattgttttt 352  Q
    ||||||  ||||||||||    
T  42938128 tttcttaggattgttttt 42938111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 141 - 352
Target Start/End: Complemental strand, 24502028 - 24501807
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| ||||| |||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||    
T  24502028 ttgtgttattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 24501929  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||    
T  24501928 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 24501829  T
Q  331 gagatttcttgagattgttttt 352  Q
    ||||||||||  ||||||||||    
T  24501828 gagatttcttaggattgttttt 24501807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 38 - 352
Target Start/End: Complemental strand, 23115486 - 23115163
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||           
T  23115486 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 23115387  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||||| |||||||||||| ||||| ||||||  |||||||||||||| | || |||| ||       |||| |||||||||||    
T  23115386 gtcttgtgttattcaatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 23115287  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    | |||||||||||| |||  ||||||||||||||          |||||||||||||||||| || || ||||||  || ||||||||||||||||||||    
T  23115286 a-tcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaaaa 23115188  T
Q  328 gatgagatttcttgagattgttttt 352  Q
     |||||||| |||  ||||||||||    
T  23115187 catgagattccttaggattgttttt 23115163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 43 - 352
Target Start/End: Complemental strand, 7507212 - 7506893
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||         |||    
T  7507212 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaagttt 7507113  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||| ||| || ||||||||| | ||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||| ||    
T  7507112 gtgttattcaatcgagattccttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaacca 7507013  T
Q  243 ttcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 332  Q
    ||||||||| |||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||| ||| ||||    
T  7507012 ttcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacatga 7506913  T
Q  333 gatttcttgagattgttttt 352  Q
    ||||||||  ||||||||||    
T  7506912 gatttcttaggattgttttt 7506893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 147 - 337
Target Start/End: Complemental strand, 10392446 - 10392246
Alignment:
Q  147 tattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 246  Q
    ||||||||||||| ||||||||||||||||||| |||||   ||||||||||||| |||| |||| ||       |||| |||||||||| |||||||||    
T  10392446 tattcaatcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattca 10392347  T
Q  247 aatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 336  Q
    |||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||    
T  10392346 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatt 10392247  T
Q  337 t 337  Q
    |    
T  10392246 t 10392246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 139 - 362
Target Start/End: Complemental strand, 39190030 - 39189800
Alignment:
Q  139 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaa 238  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||  ||||||||| || | | || |||||||       ||||  || |||||||     
T  39190030 ttttgtggtattcaatcaagactctttgcaatttaaaaaaagtcttgtggtattcaataaaaactctttatcatttaaaaaaagtctcatg-tattcaac 39189932  T
Q  239 atcattcaaatttcgaattattgtttaataaattg---------gattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 329  Q
    |||||||||||||||||  ||||||||||||||||         |||||||  | ||||| ||||  ||||||||||||||||| ||||||||||||| |    
T  39189931 atcattcaaatttcgaaggattgtttaataaattgaatttgatggattttgatgaattttctagta-aattttaacaagaaaaaatctttcatgaaaaca 39189833  T
Q  330 tgagatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||| ||||||||||||||||||||    
T  39189832 tgagatttcttgggattgtttttcttttaaaag 39189800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 42 - 195
Target Start/End: Complemental strand, 43166962 - 43166809
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttt 141  Q
    ||||||||||||| |||| ||||||||||||||| | ||||||||||        |||||||||||||||| || ||||||||||||||       || |    
T  43166962 atgtattggattaagattttatgggattttaaaatactttttaattaagaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtct 43166863  T
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaa 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  43166862 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaa 43166809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 43 - 327
Target Start/End: Complemental strand, 32711595 - 32711313
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| | || ||||||||| ||||| || ||       | |||||||||||||| || ||| ||| ||||||       || ||    
T  32711595 tgtattggatcatgattctaagagactttaaaagacttttttatcatgaaaaagttttgtggtattcaatcaagactcttttcaatttaaaaaaagtctt 32711496  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||    
T  32711495 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 32711396  T
Q  243 ttcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    || ||||||||||  ||||||||||||||  |||||||||| |   | || || ||||||| || ||||||||||||||||||||    
T  32711395 tttaaatttcgaaggattgtttaataaatcagattttgtggaa--atctattgaaattttagcatgaaaaagtctttcatgaaaa 32711313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 141 - 352
Target Start/End: Original strand, 42937344 - 42937563
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| | |||||||||| ||||||||||||  ||||||||||  || | || |||| ||       |||| ||||||||||||||    
T  42937344 ttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggtattcaaaat 42937441  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| ||  ||||||||||||||||||| ||    
T  42937442 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaaaacat 42937541  T
Q  331 gagatttcttgagattgttttt 352  Q
    ||||||||||  ||||||||||    
T  42937542 gagatttcttatgattgttttt 42937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 40 - 199
Target Start/End: Original strand, 32497373 - 32497532
Alignment:
Q  40 ggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngt 139  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||| ||       |||||||||||||||| || ||||||| ||| ||       ||    
T  32497373 ggatgtattggattaggattctatgggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaaagt 32497472  T
Q  140 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaa 199  Q
     ||||||||||||||||||||| ||||  | || |||||| |||||  ||||||||||||    
T  32497473 cttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaa 32497532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 183
Target Start/End: Complemental strand, 39190085 - 39189944
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttt 141  Q
    ||||||||||||| ||||||| |||||||||||||| |||||||||||       | |||||||||||||| || ||| ||||||||||       || |    
T  39190085 atgtattggattaggattctaagggattttaaaagactttttaattatgaattttttttgtggtattcaatcaagactctttgcaatttaaaaaaagtct 39189986  T
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtct 183  Q
    ||||||||||||| || ||||||| |||||| ||||||||||    
T  39189985 tgtggtattcaataaaaactctttatcatttaaaaaaagtct 39189944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 41070018 - 41070091
Alignment:
Q  223 tcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgt 296  Q
    |||||||||||| |||||||||| |||||| ||| ||||||| |||||||| ||||| ||||||||| ||||||    
T  41070018 tcttgtggtatttaaaatcattccaatttcaaatgattgtttgataaattgaattttctgggattttctagtgt 41070091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 13478384 - 13478313
Alignment:
Q  222 gtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtag 293  Q
    ||||||| |||||||||||| || ||||||||||  ||||||||||||||| ||||| || |||||||||||    
T  13478384 gtcttgtagtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtag 13478313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 43308593 - 43308546
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    ||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  43308593 atgtattggattaggattctatggaattttaaaagactttttaattat 43308546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 29930904 - 29930843
Alignment:
Q  139 ttttgtggtattcaatcaagactctttgtcattt-taaaaaagtcttgaagtattcaatcaa 199  Q
    ||||||||||||||||||||| | |||||||||| ||||||| ||||| | |||||||||||    
T  29930904 ttttgtggtattcaatcaagattatttgtcatttataaaaaaatcttgtattattcaatcaa 29930843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 361
Target Start/End: Complemental strand, 4950150 - 4950000
Alignment:
Q  222 gtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaa 311  Q
    |||||| ||||||||||||||||||| |||| ||  ||| ||||||||||          |||| ||||||| ||||| ||||| ||||||| || ||||    
T  4950150 gtcttggggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtggaattttctagtgaaattttagcatgaaa 4950051  T
Q  312 aagtctttcatgaaaagatgagatttcttgagattg-tttttcttttaaaa 361  Q
    || | ||||||| ||| || ||||||||| | |||| ||||||||||||||    
T  4950050 aaatatttcatgcaaacataagatttcttaaaattgttttttcttttaaaa 4950000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 291
Target Start/End: Complemental strand, 8410526 - 8410463
Alignment:
Q  228 tggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 291  Q
    ||||||||||||||||| |||||| |||  |||||||| ||||||||| ||||  |||||||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgt 8410463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 8543402 - 8543452
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    |||| |||| |||||| ||| ||||||||| ||||||||||||||||||||    
T  8543402 cttaagggggtgtattagatcatgattctaagggattttaaaagatttttt 8543452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 24502094 - 24502044
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    ||||||||| |||||||||| |||||||||  ||||||||||||| |||||    
T  24502094 cttaggggggtgtattggatcatgattctaaaggattttaaaagacttttt 24502044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 37857092 - 37857142
Alignment:
Q  39 gggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    ||||| ||||||||||  ||| || ||||||||||||||||||||||||||    
T  37857092 gggatatattggattagaattttacgggattttaaaagattttttaattat 37857142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 9771035 - 9770962
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatca 211  Q
    |||||||  ||||||||||||| ||||| |||||| |||||||||  |  |||||||||||||| |||| ||||    
T  9771035 gttttgttttattcaatcaagaatctttctcatttaaaaaaagtcacgttgtattcaatcaagactttttatca 9770962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 32497432 - 32497497
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagattttt 206  Q
    ||||||||||||||||||||| |||   | || ||||||||||||  |||||||||||||| ||||    
T  32497432 ttgtggtattcaatcaagactttttacaacttaaaaaaagtcttgtggtattcaatcaagactttt 32497497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 9770545 - 9770497
Alignment:
Q  231 tattcaaaatcattcaaatttcgaattattgtttaataaattggatttt 279  Q
    |||||||||| ||||||||||| ||  ||| ||||||||||||||||||    
T  9770545 tattcaaaataattcaaatttcaaagaattatttaataaattggatttt 9770497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 9771137 - 9771089
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttt 82  Q
    |||| |||||||||||||||| |||| || |||||||||||| ||||||    
T  9771137 ttagagggatgtattggattaagattttaagggattttaaaatattttt 9771089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 206; Significance: 1e-112; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 34 - 362
Target Start/End: Complemental strand, 30967622 - 30967294
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||| || ||||||||||||||       
T  30967622 ttaggtggatgtattggattatgattttatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 30967523  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||       ||||||||||||    
T  30967522 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtat 30967423  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 333  Q
    ||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||    
T  30967422 tcaaaatcattcaaatttcaaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaaataag 30967323  T
Q  334 atttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||| |||||||||    
T  30967322 atttcttgagattgttttttttttaaaag 30967294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 34 - 362
Target Start/End: Original strand, 5441287 - 5441625
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||       
T  5441287 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 5441386  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||    
T  5441387 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 5441486  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 323  Q
    ||||||||||||||||||||||  ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5441487 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 5441586  T
Q  324 aaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  5441587 aaaagatgagatttcttgagattgtttttattttaaaag 5441625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 34 - 362
Target Start/End: Original strand, 27767939 - 27768277
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || | ||||||||||||       
T  27767939 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattttttgcaatttaaa 27768038  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||    
T  27768039 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 27768138  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 323  Q
    ||||||||||||||||||||||  ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27768139 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 27768238  T
Q  324 aaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  27768239 aaaagatgagatttcttgagattgtttttattttaaaag 27768277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 38 - 362
Target Start/End: Original strand, 54341031 - 54341365
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||           
T  54341031 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaa 54341130  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||||||    
T  54341131 gtcttatggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 54341230  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||||||||||  ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54341231 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 54341330  T
Q  328 gatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||| |||||||||    
T  54341331 gatgagatttcttgagattgtttttattttaaaag 54341365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 33 - 362
Target Start/End: Original strand, 51320803 - 51321142
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    |||||||||||||||||||||| ||||||| || ||||||||||| |||||||||||       | |||||||||||||| || ||||||||||| ||      
T  51320803 cttagggggatgtattggattaggattctacggaattttaaaagactttttaattatgaaaaaattttgtggtattcaatcaagactttttgcaacttaa 51320902  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
         ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||||||||||    
T  51320903 aaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 51321002  T
Q  233 ttcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttg----------tagtgtaattttaacaagaaaaagtctttcat 322  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||  ||||||||          ||||||||||||||||||||||||| ||||||    
T  51321003 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcat 51321102  T
Q  323 gaaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  51321103 gaaaagatgagatttcttgagattgtttttcttttaaaag 51321142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 32 - 362
Target Start/End: Complemental strand, 54853793 - 54853453
Alignment:
Q  32 tcttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttn 131  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||| ||||||||||        |||||||||||||||| || ||||||||||| ||     
T  54853793 tcttagggggatgtattggattaggattttatggaattttaaaagactttttaattacgaaaaagtcttgtggtattcaatcaagactttttgcaactta 54853694  T
Q  132 nnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggt 231  Q
          || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||       ||||||||||    
T  54853693 aaaaaagtcttgtggtattcaatcaagactctttttcattttaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggt 54853594  T
Q  232 attcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 321  Q
    ||||||||| ||||||||||| ||  ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  54853593 attcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttca 54853494  T
Q  322 tgaaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  54853493 tgaaaagatgagatttcttgagattgtttttcttttaaaag 54853453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 36 - 361
Target Start/End: Complemental strand, 37828721 - 37828388
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||||||||||||||  |||||  | |||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||         
T  37828721 agggggatgtattggattagaattct--gagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaaattaaaaa 37828624  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
       | ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||       ||||||||||||||    
T  37828623 aaatcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattc 37828524  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    ||||||||||||||||||||  ||||||||||||||          ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37828523 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaa 37828424  T
Q  326 aagatgagatttcttgagattgtttttcttttaaaa 361  Q
    ||||||||||||||||||||||||||| ||||||||    
T  37828423 aagatgagatttcttgagattgtttttattttaaaa 37828388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 42 - 362
Target Start/End: Complemental strand, 49501828 - 49501504
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaat-taacactttttgcaatttnnnnnnn-gt 139  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||       |||||||||||| ||| ||| |||||||| |||||        ||    
T  49501828 atgtatttgattaggattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattgaatctaagactttttgtaatttaaaaaaaagt 49501729  T
Q  140 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
     |||  ||||||||||||||||||||||||||||||| || |||||| |||||||||||||| ||||||||| ||       ||||||||| ||||||||    
T  49501728 cttgcagtattcaatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaa 49501629  T
Q  240 tcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc--atgaaaagatgagattt 337  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  49501628 tcattcaaatttcgaatgattgtttaataaattggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagattt 49501529  T
Q  338 cttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||    
T  49501528 cttgagattgtttttcttttaaaag 49501504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 42 - 362
Target Start/End: Complemental strand, 49507893 - 49507569
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaat-taacactttttgcaatttnnnnnnn-gt 139  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||       |||||||||||| ||| ||| |||||||| |||||        ||    
T  49507893 atgtatttgattaggattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattgaatctaagactttttgtaatttaaaaaaaagt 49507794  T
Q  140 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
     |||  ||||||||||||||||||||||||||||||| || |||||| |||||||||||||| ||||||||| ||       ||||||||| ||||||||    
T  49507793 cttgcagtattcaatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaa 49507694  T
Q  240 tcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc--atgaaaagatgagattt 337  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  49507693 tcattcaaatttcgaatgattgtttaataaattggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagattt 49507594  T
Q  338 cttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||    
T  49507593 cttgagattgtttttcttttaaaag 49507569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 141 - 362
Target Start/End: Original strand, 23987204 - 23987425
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| | ||||||||| ||       |||||||||||||||||||    
T  23987204 ttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaat 23987303  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 340  Q
    |||||||||||||||  ||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23987304 cattcaaatttcgaaggattgtttaataaattagattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 23987403  T
Q  341 gagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||    
T  23987404 gagattgtttttcttttaaaag 23987425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 44 - 362
Target Start/End: Complemental strand, 49835126 - 49834818
Alignment:
Q  44 gtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttg 143  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||       || |||    
T  49835126 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttg 49835027  T
Q  144 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcat 243  Q
    |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| ||||||||| ||       ||||||||||||||||||||||    
T  49835026 tggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcat 49834927  T
Q  244 tcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 343  Q
    ||||||||||||  |||||||||||||||          |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  49834926 tcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaagaagtctttcattaaaagatgagatttcttgag 49834837  T
Q  344 attgtttttcttttaaaag 362  Q
    ||||||||||| |||||||    
T  49834836 attgtttttctattaaaag 49834818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 42 - 349
Target Start/End: Original strand, 50018142 - 50018449
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttt 141  Q
    |||||||||||||  ||||||||||||||||||| |||||||||||||       |||||||||||||||| || ||||||| ||||||       || |    
T  50018142 atgtattggattagaattctatgggattttaaaatattttttaattataaaaaagtcttgtggtattcaatcaagactttttacaatttaaaaaaagtct 50018241  T
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatc 241  Q
    | ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||| ||||||       |||||||||||||||| |||    
T  50018242 tatggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattccatcaagacttttcttcatttaaaaaaagtcttgtggtattcaagatc 50018341  T
Q  242 attcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 341  Q
    |||||||||| |||  |||||||||||||||| |||||   ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  50018342 attcaaattttgaaggattgtttaataaattgaattttaatggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgagatttattg 50018441  T
Q  342 agattgtt 349  Q
    ||||||||    
T  50018442 agattgtt 50018449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 34 - 362
Target Start/End: Original strand, 5799861 - 5800189
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||| || |||| ||||| |||| ||||||||||||||||| |||||||||||       | |||||||||| |||||| ||||||||||| ||       
T  5799861 ttaggggtatctattagattaggattttatgggattttaaaagactttttaattatgaaaagtt-ttgtggtattaaattaagactttttgcaacttaaa 5799959  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggta 232  Q
        ||||||||||||||||||||||||||||||||||||||||||   |||| |||||  ||||| | ||||||||| ||        |||||||||||    
T  5799960 aaaagttttgtggtattcaatcaagactctttgtcattttaaaaaaaatttgatgtatttcatcaaaacttttcatcacttaaaaaaaagtcttgtggta 5800059  T
Q  233 ttcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 332  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||| |    
T  5800060 ttcaaaatcattcaaatttcaaaggattgtttaataaattggattttgtgagattttgtagagtaattttaacaagaaaaagtctttaatgaaaagataa 5800159  T
Q  333 gatttcttgagattgtttttcttttaaaag 362  Q
    ||||| ||||||||||||||||||||||||    
T  5800160 gattttttgagattgtttttcttttaaaag 5800189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 40 - 359
Target Start/End: Original strand, 32321980 - 32322309
Alignment:
Q  40 ggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngt 139  Q
    ||||||||||||||| ||||||||  || ||||||||| |||||||||||       | |||||||||||||| || | |||||| || ||       ||    
T  32321980 ggatgtattggattaggattctatcagaatttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagattttttgtaacttaaaaaaagt 32322079  T
Q  140 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
      |||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||       ||||||||||||||||||    
T  32322080 catgtgatatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaa 32322179  T
Q  240 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 329  Q
    ||||||||||||||||  ||||||||||||||          ||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  32322180 tcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaaga 32322279  T
Q  330 tgagatttcttgagattgtttttcttttaa 359  Q
    ||||||||||||||||||||||||||||||    
T  32322280 tgagatttcttgagattgtttttcttttaa 32322309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 38 - 362
Target Start/End: Original strand, 12913110 - 12913435
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||||| |||| ||||| || |||| | |||||||||||||||||||||| |       |||||||||||||||| || ||| |||  |||||           
T  12913110 ggggatatattcgattaggaatctaagagattttaaaagattttttaattttgaaaaagtcttgtggtattcaatcaagactctttataatttaaaaaaa 12913209  T
Q  138 -gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
     || |||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||       ||||  |||||||||    
T  12913210 agtcttgtggtatttaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagctttttcatcatttaaaaaaagtctcatggtattca 12913309  T
Q  237 aaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 336  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||| | ||||||||    
T  12913310 aaatcattcaaattttgaaggattgtttaataaattggattttgtgggattttctagtgaaattttaacaagaaaaagtatttcatgaagacatgagatt 12913409  T
Q  337 tcttgagattgtttttcttttaaaag 362  Q
    |||||  ||| |||||||||||||||    
T  12913410 tcttggaattatttttcttttaaaag 12913435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 141 - 362
Target Start/End: Original strand, 37915817 - 37916048
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||| ||||||||| ||       |||||||||||||||||||    
T  37915817 ttgtggtattcaatcaagactctctatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 37915916  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  37915917 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaagat 37916016  T
Q  331 gagatttcttgagattgtttttcttttaaaag 362  Q
     |||||| ||||||||||||||||||||||||    
T  37916017 aagatttattgagattgtttttcttttaaaag 37916048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 141 - 362
Target Start/End: Complemental strand, 32684203 - 32683993
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||||||||||| |||| ||||||||||||||||||||| |||| |||||||||||||| ||||||||||||       |||||||||||||||||||    
T  32684203 ttgtggtattcaattaagattctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcatttaaaaaa-gtcttgtggtattcaaaat 32684105  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 340  Q
    |||||||||||||||  ||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  32684104 cattcaaatttcgaaggattgtttaataaattggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttatt 32684015  T
Q  341 gagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||    
T  32684014 gagattgtttttcttttaaaag 32683993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 141 - 361
Target Start/End: Complemental strand, 36479447 - 36479228
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||       |||| ||||||||||||||    
T  36479447 ttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattcaaaat 36479348  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 340  Q
     ||||||||||||||  ||| |||||||||||||||||||  ||||||| ||||| ||||||| ||| ||||||||||| ||||||| ||||||||||||    
T  36479347 tattcaaatttcgaaggattatttaataaattggattttgatggatttt-tagtgaaattttagcaaaaaaaagtcttttatgaaaacatgagatttctt 36479249  T
Q  341 gagattgtttttcttttaaaa 361  Q
    |||||| ||||||||||||||    
T  36479248 gagattatttttcttttaaaa 36479228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 38 - 291
Target Start/End: Complemental strand, 29649986 - 29649733
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||||||||       | |||||||||||||| || ||||||||||||||           
T  29649986 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaatttaaaaaaa 29649887  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||||||||  || || |||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||||||    
T  29649886 gtcttgtggtattagattaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 29649787  T
Q  238 aatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 291  Q
    ||||||||||||||||||  |||||||||||||||||||||||  |||||||||    
T  29649786 aatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgt 29649733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 175 - 361
Target Start/End: Original strand, 28483923 - 28484108
Alignment:
Q  175 aaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattgg 274  Q
    |||||||||||| |||||||||||||| ||||||||| ||       |||| |||||||||||||||||||||||||||||  ||| |||||||||||||    
T  28483923 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 28484022  T
Q  275 attttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaa 361  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||    
T  28484023 attttgtaggattttgtagtgtaa-tttaacaagaaaaagtctttcatgaaaagacgagatttcttaagattatttttcttttaaaa 28484108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 43 - 352
Target Start/End: Complemental strand, 31315042 - 31314737
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||||||||| || ||       | |||||||||||||| || ||||||| ||||||       || ||    
T  31315042 tgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaagacttttttcaatttaaaaaaagtctt 31314943  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| |||| |||||||| |||||||||||| ||||||||||||  ||||||||    || | || |||| ||       |||| ||||||||||||||||    
T  31314942 gtgttatttaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa----gactcttaatcacttaaaaaaagtctagtggtattcaaaatca 31314847  T
Q  243 ttcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 342  Q
    |||||||||||||  ||||||||||||||  |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||      
T  31314846 ttcaaatttcgaaggattgtttaataaatcagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttag 31314747  T
Q  343 gattgttttt 352  Q
    ||||||||||    
T  31314746 gattgttttt 31314737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 41 - 341
Target Start/End: Original strand, 41725015 - 41725322
Alignment:
Q  41 gatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtt 140  Q
    ||||||||| |||| ||||||||   |||||||||||||||||||||||       ||||||| |||||||| || | ||||||||| ||        |     
T  41725015 gatgtattgaattaggattctataaaattttaaaagattttttaattataaaaaagtcttgtgatattcaatcaagattttttgcaacttaaaaaaaata 41725114  T
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||| |||||||||  |       |||||||| ||||||||||    
T  41725115 ttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgatgtatgcaatcaagacttttcatcacctaaaaaaagtcttgtgatattcaaaat 41725214  T
Q  241 cattcaaatttcgaattattgtttaa--taaatt-----ggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 333  Q
    ||||||||||| |||  |||||||||  |  |||     | ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  41725215 cattcaaattttgaaggattgtttaaattggattttgatgaattttgtgggattttatagtgtaattttaacaagaaaaaatctttcatgaaaagatgag 41725314  T
Q  334 atttcttg 341  Q
    ||||||||    
T  41725315 atttcttg 41725322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 228 - 356
Target Start/End: Complemental strand, 56445474 - 56445346
Alignment:
Q  228 tggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| || |||| |||||||||||||||||| || |    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgtgggattttctagtgaaactttagcaagaaaaagtctttcataaaga 56445375  T
Q  328 gatgagatttcttgagattgtttttcttt 356  Q
     ||||||||||||||||||||||||||||    
T  56445374 catgagatttcttgagattgtttttcttt 56445346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 38 - 357
Target Start/End: Complemental strand, 40537464 - 40537150
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| |||||| || |||||||||||||| ||||  || ||       ||||||||||||||||||| ||| |||  |||||           
T  40537464 gggggtgtattggatcatgattgtaagggattttaaaagacttttgtatcataaaaaagtcttgtggtattcaattaagactctttctaatttaaaaaaa 40537365  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| |||||||||||||||||||||||||| ||||||||||||  |||||||||||| | | || |||| ||           ||||||||||||    
T  40537364 gtcttgtgttattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaa-----tgtggtattcaa 40537270  T
Q  238 aatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 337  Q
    ||||||| ||||||||||| ||||||||||||||  |||||||  ||||||||| ||| ||||||| || |||||||||||||||||||| |||||||||    
T  40537269 aatcatttaaatttcgaatgattgtttaataaatctgattttgatggattttgtggtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 40537170  T
Q  338 cttgagattgtttttctttt 357  Q
    |||  |||| ||||| ||||    
T  40537169 cttaggattttttttttttt 40537150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 222 - 362
Target Start/End: Original strand, 48261198 - 48261348
Alignment:
Q  222 gtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaa 311  Q
    |||||||||||||||||||||||||||||| |||  ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48261297  T
Q  312 aagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    || ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  48261298 aaatctttcatgaaaatatgagatttcttgagattgtttttattttaaaag 48261348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 38 - 352
Target Start/End: Original strand, 25331018 - 25331342
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| |||||||||   |||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||           
T  25331018 gggggtgtattggatcatgattctaaaagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 25331117  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||| |||||||    
T  25331118 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaa 25331217  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||||||| ||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  25331218 aatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 25331317  T
Q  328 gatgagatttcttgagattgttttt 352  Q
     ||||||||||||  ||||||||||    
T  25331318 catgagatttcttaggattgttttt 25331342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 36 - 352
Target Start/End: Complemental strand, 41881405 - 41881077
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaaga-ttttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnn 134  Q
    |||||| |||||||||| |||||| || |||||||||||||| |||||| || ||       |||||||||||||||| || ||| ||| ||||||        
T  41881405 aggggggtgtattggatcatgattttaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattttaaa 41881306  T
Q  135 nnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggtat 233  Q
       || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||        || | |||||||    
T  41881305 aaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggtat 41881206  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 323  Q
    ||||||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||    
T  41881205 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 41881106  T
Q  324 aaaagatgagatttcttgagattgttttt 352  Q
    |||| ||||||||||||  ||||||||||    
T  41881105 aaaacatgagatttcttaggattgttttt 41881077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 36 - 211
Target Start/End: Original strand, 20021229 - 20021404
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||||||||||||||| ||| || |||||||||||||| |||||||||||       |||||||||||| ||| || ||| ||||||||||         
T  20021229 agggggatgtattggattataattttaagggattttaaaagactttttaattatgaaaaagtcttgtggtatttaatcaagactctttgcaatttaaaaa 20021328  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatca 211  Q
      |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  20021329 aagttttgtggtattcaatcaagattctttgtcattttaaaaaaatcttgaagtattcaatcaagacttttcatca 20021404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 38 - 340
Target Start/End: Original strand, 22201902 - 22202214
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       ||||||| |||||||| || ||| ||| ||||||           
T  22201902 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaa 22202001  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| |||||||||||    
T  22202002 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 22202101  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||| ||||||| ||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  22202102 aatcattaaaatttcaaaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 22202201  T
Q  328 gatgagatttctt 340  Q
     || |||||||||    
T  22202202 cattagatttctt 22202214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 147 - 352
Target Start/End: Original strand, 1112889 - 1113104
Alignment:
Q  147 tattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 246  Q
    ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||||||    
T  1112889 tattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattca 1112988  T
Q  247 aatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 336  Q
    |||||| ||| ||||||||||||||          |||||||||||||||||  ||||  |||||||||| |||||||||||||||||||| ||||||||    
T  1112989 aatttcaaatgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgagatt 1113088  T
Q  337 tcttgagattgttttt 352  Q
    ||||  ||||||||||    
T  1113089 tcttaggattgttttt 1113104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 49 - 352
Target Start/End: Complemental strand, 32951144 - 32950831
Alignment:
Q  49 ggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggta 148  Q
    |||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       || ||||| ||    
T  32951144 ggatcatgattctaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgtta 32951045  T
Q  149 ttcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaa 248  Q
    ||||||||||| | |||||||||| ||||||||| ||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||||||||    
T  32951044 ttcaatcaagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaa 32950945  T
Q  249 tttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 338  Q
    |||||||  ||||||||||||||          || ||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||    
T  32950944 tttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttc 32950845  T
Q  339 ttgagattgttttt 352  Q
    || ||||| |||||    
T  32950844 ttaagatttttttt 32950831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 147 - 352
Target Start/End: Complemental strand, 46635852 - 46635643
Alignment:
Q  147 tattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 246  Q
    ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       || | || |||||||||||||||||    
T  46635852 tattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattcaaaatcattca 46635753  T
Q  247 aatttcgaattattgtttaataaat----tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 342  Q
    |||||||||  ||||||||||||||    | |||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| ||||||||||||      
T  46635752 aatttcgaaggattgtttaataaataagattgattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttag 46635653  T
Q  343 gattgttttt 352  Q
    ||||||||||    
T  46635652 gattgttttt 46635643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 34 - 340
Target Start/End: Original strand, 1044693 - 1045006
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    |||||||| |||||||||| ||||||||| |||||||||||||||||||| || ||       |||||||||||||||| || ||| ||| ||||||       
T  1044693 ttaggggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 1044792  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||| ||||||||||||| || |||||||||  |||||||||||  |||||||||||||| | || |||| ||       |||| |||||||    
T  1044793 aaa-gtcttgtgttattcaatcaagattccttgtcattt--aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 1044889  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 323  Q
    |||||| ||||||| |||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||    
T  1044890 tcaaaaccattcaactttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 1044989  T
Q  324 aaaagatgagatttctt 340  Q
    |||| || |||||||||    
T  1044990 aaaacataagatttctt 1045006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 34 - 291
Target Start/End: Original strand, 28541581 - 28541838
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||| || |||||||||| ||||||||| ||||||||||||||  |||| |||||       |||||||||||||||| || ||| ||| ||||||       
T  28541581 ttaggagggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaa 28541680  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||| ||||||||||||| |||||||||||| |||||||||| |  |||||||||||||| | || |||| ||       |||| |||||||    
T  28541681 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 28541780  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 291  Q
    ||||||||||||||||||||||| ||||||||||||||  |||||||  |||||||||    
T  28541781 tcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgt 28541838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 141 - 362
Target Start/End: Complemental strand, 44771070 - 44770841
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagt-attcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| ||        |||  ||||||||||||    
T  44771070 ttgtgatattcaatcaagactctttgtcattttaaaaaaatcttgaggtaattcaatcaagatttttcatcacttaaaaaaaatctcatggtattcaaaa 44770971  T
Q  240 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 329  Q
    |||||||||||| |||  ||||||||||||||          |||||||||||||||||| ||||| |||||||| |||||||||||||||||||  | |    
T  44770970 tcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtctttcatgacgaca 44770871  T
Q  330 tgagatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||   | |||| ||||||||||||||    
T  44770870 tgagatttc---atattgcttttcttttaaaag 44770841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 149 - 349
Target Start/End: Original strand, 55302841 - 55303051
Alignment:
Q  149 ttcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaa 248  Q
    ||||||||||| |||||||||||||||||||||| ||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||||||||    
T  55302841 ttcaatcaagattctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaa 55302940  T
Q  249 tttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 338  Q
    |||||||  ||||||||||||||          ||||| |||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||    
T  55302941 tttcgaaggattgtttaataaatcagattttgatggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 55303040  T
Q  339 ttgagattgtt 349  Q
    || ||||||||    
T  55303041 ttaagattgtt 55303051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 141 - 291
Target Start/End: Original strand, 9163066 - 9163216
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||  |       |||||||| ||||||||||    
T  9163066 ttgtggtattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattcaaaat 9163165  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 291  Q
    |||||||||||||||  |||||||||||||||  ||||||  |||||||||    
T  9163166 cattcaaatttcgaaggattgtttaataaattaaattttgatggattttgt 9163216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 141 - 352
Target Start/End: Original strand, 12112935 - 12113156
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||| | | || |||| ||       ||||  |||||||||||||    
T  12112935 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaaaat 12113034  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||||||||||||  ||||||||||||||          |||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||    
T  12113035 cattcaaatttcgaaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 12113134  T
Q  331 gagatttcttgagattgttttt 352  Q
    ||||||||||| ||||||||||    
T  12113135 gagatttcttgggattgttttt 12113156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 38 - 352
Target Start/End: Complemental strand, 39479676 - 39479350
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| |||||| || |  ||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||           
T  39479676 gggggtgtattggatcatgattttaagaaattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaa 39479577  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn--gtcttgtggtattc 235  Q
    || ||||| ||||||||||||| || ||||||||| ||||||||||||  |||||||||||||| | || |||| ||         | ||||||||||||    
T  39479576 gtcttgtgttattcaatcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggtattc 39479477  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    ||||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  39479476 aaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtctttcatgaa 39479377  T
Q  326 aagatgagatttcttgagattgttttt 352  Q
    |  ||||||||||||  ||||||||||    
T  39479376 agcatgagatttcttaggattgttttt 39479350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 142 - 352
Target Start/End: Complemental strand, 34228798 - 34228578
Alignment:
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatc 241  Q
    |||| ||||||||||||| |||||||||||| ||||||||| ||  |||||||||||| ||| || |||| ||       |||| |||||||||||||||    
T  34228798 tgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatc 34228699  T
Q  242 attcaaatttcgaattattgtttaataaattggattttgtgggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatg 331  Q
    ||| ||||||||||| ||||||||||||||  |||||||  ||||||||          ||||| ||||||| || |||||||||||||||||||| |||    
T  34228698 attgaaatttcgaatgattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 34228599  T
Q  332 agatttcttgagattgttttt 352  Q
    ||||||||| |||||||||||    
T  34228598 agatttcttaagattgttttt 34228578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 38 - 352
Target Start/End: Complemental strand, 30009996 - 30009672
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| ||||||||||||||  |||| |||||       |||| | ||||||||| || ||| ||| ||||||           
T  30009996 gggggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttattgtattcaatcaagactctttccaatttaaaaaaa 30009897  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| |||| |||||| | ||||| |||||| ||||||||| ||  |||||||||||||| | || |||| ||       |||| |||||||||||    
T  30009896 gtcttgtgttatttaatcaaaattctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 30009797  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||| ||||||  ||| ||||||||||||||          |||||||||||||||||| ||||  ||||||| || ||||||||||||||||||||    
T  30009796 aatcatttaaattttaaatgattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaa 30009697  T
Q  328 gatgagatttcttgagattgttttt 352  Q
     |||||||||||| |||||||||||    
T  30009696 catgagatttcttaagattgttttt 30009672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 37 - 201
Target Start/End: Original strand, 37915671 - 37915835
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||       |||||||||||||||| || |||||||| || ||          
T  37915671 ggggggtgtattggattatgattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgtaacttaaaaaa 37915770  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaaga 201  Q
     || ||||||||||||||||||||| ||||||| || ||||||||||||  ||||||||||||||    
T  37915771 agtcttgtggtattcaatcaagactttttgtcacttaaaaaaagtcttgtggtattcaatcaaga 37915835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 138 - 340
Target Start/End: Complemental strand, 39307472 - 39307260
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    |||||||||||||||||||||| | |||| ||||||||||||||||||  |||||||||||||||| ||||||||||       |||||||||||||||     
T  39307472 gttttgtggtattcaatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcat 39307373  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||||||| ||  ||| |||||| |||          || ||||||||||||||| ||||| |||||||||| |||||||| | | || ||||    
T  39307372 aatcattcaaatttctaaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaaattttaacatgaaaaagtttctgataaaaa 39307273  T
Q  328 gatgagatttctt 340  Q
     ||||||||||||    
T  39307272 catgagatttctt 39307260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 43 - 352
Target Start/End: Complemental strand, 37046766 - 37046445
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| || |||||||||||| |||| || ||       |||||||||||||||| || ||| ||| ||||||       || ||    
T  37046766 tgtattggatcatgattctaaggaattttaaaagatatttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtctt 37046667  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggtattcaaaatc 241  Q
    ||| ||||||||||||| |||||||||||| |||||||| |||  |||||||||||||| | || |||| ||        |||| ||| |||| ||||||    
T  37046666 gtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatttaaaatc 37046567  T
Q  242 attcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaa-ttttaacaagaaaaagtctttcatgaaaagat 330  Q
    ||||||||||||||  ||||||||||||||          |||||||||||| ||||| ||||| || ||||| || |||||||||||||||||||| ||    
T  37046566 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttcatgaaaatat 37046467  T
Q  331 gagatttcttgagattgttttt 352  Q
    ||||||||||  ||||||||||    
T  37046466 gagatttcttaggattgttttt 37046445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 141 - 352
Target Start/End: Original strand, 7007364 - 7007585
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||| ||  |||||||||||||| | || |||| ||       |||| ||||||||||||||    
T  7007364 ttgtgttattcaatcaagattctctgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 7007463  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||||||||||||  ||||||||||||||          || ||||||||||||||| ||||| ||||||| || |||||  | ||||||||||| ||    
T  7007464 cattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaacat 7007563  T
Q  331 gagatttcttgagattgttttt 352  Q
    |||||||||| |||||||||||    
T  7007564 gagatttcttaagattgttttt 7007585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 8711997 - 8712086
Alignment:
Q  272 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaa 361  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  8711997 tggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgagattgtttttcttttaaaa 8712086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 30 - 326
Target Start/End: Complemental strand, 19741234 - 19740929
Alignment:
Q  30 agtcttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatt 129  Q
    ||||| |||||||||||||  || |||||||||   |||||||||||| |||||| | ||       |||||||||||||||| || ||| ||| |||||    
T  19741234 agtctaagggggatgtattcaatcatgattctaaaagattttaaaagacttttta-tcatgaaaaaatcttgtggtattcaatcaagactctttccaatt 19741136  T
Q  130 tnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtg 229  Q
    |       || ||||| ||||||||||||| ||||||||||||  |||||||| ||  ||||||| |||||| |||| |||| ||       ||||||||    
T  19741135 taaaaaaagtcttgtgttattcaatcaagattctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtg 19741036  T
Q  230 gtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 319  Q
    ||||| ||||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| |  ||||||||||||    
T  19741035 gtattaaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtcttt 19740936  T
Q  320 catgaaa 326  Q
    |||||||    
T  19740935 catgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 38 - 198
Target Start/End: Original strand, 29855569 - 29855728
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||||| |||||||||| |||||||||| |||||||||||||||| ||||||       ||||||| ||||||||||| ||||||||||||||           
T  29855569 ggggatttattggattaggattctatggaattttaaaagatttttaaattatgaaaaagtcttgtgatattcaattaagactttttgcaatttaaaaaaa 29855668  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatca 198  Q
    ||||||| ||||| |||||||||| ||||||||||||||||| | |||| |||||||||||    
T  29855669 gttttgt-gtatttaatcaagactgtttgtcattttaaaaaaattttgaggtattcaatca 29855728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 175 - 352
Target Start/End: Original strand, 42786708 - 42786895
Alignment:
Q  175 aaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaat--- 271  Q
    |||||||||||  |||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||       
T  42786708 aaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcat 42786807  T
Q  272 -------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 352  Q
           |||||||||||| ||||| ||||| ||||||| ||  ||||||||||||||||||| ||||||||||||  ||||||||||    
T  42786808 attttgatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgattgttttt 42786895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 141 - 340
Target Start/End: Original strand, 3436583 - 3436792
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| | |||||| ||| |||||| |||||   ||||||||||||| | || |||||||        |||  |||||||||||||    
T  3436583 ttgtgttattcaatcaagattttttgtcgtttaaaaaaaatcttgtgatattcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaat 3436682  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||||||||||||  ||||||||||||||          || ||||||||||||||||||||| |||||||||| |||||||| ||||||||||| ||    
T  3436683 cattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacat 3436782  T
Q  331 gagatttctt 340  Q
     |||||||||    
T  3436783 aagatttctt 3436792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 272 - 356
Target Start/End: Original strand, 24736466 - 24736550
Alignment:
Q  272 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttt 356  Q
    ||||||||||| |||||| ||||| |||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||    
T  24736466 tggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattgtttttcttt 24736550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 43 - 352
Target Start/End: Complemental strand, 24131286 - 24130976
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       || ||    
T  24131286 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 24131187  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| |||||          |    
T  24131186 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggt----------a 24131097  T
Q  243 ttcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaag-aaaaagtctttcatgaaaagatg 331  Q
    |||||||||||||| ||||||||||||||          |||||||||||||||||| ||||| |||||||  | | ||||| ||||||||||||| |||    
T  24131096 ttcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaacatg 24130997  T
Q  332 agatttcttgagattgttttt 352  Q
    |||||||||  ||||||||||    
T  24130996 agatttcttaggattgttttt 24130976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 141 - 280
Target Start/End: Original strand, 28370914 - 28371053
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||  ||||||||||| | |||| |||| ||       ||||  |||||||||||||    
T  28370914 ttgtggtattcaatcaaaactctttgtcgttttaaaaaagtcttgagatattcaatcaaaactttttatcacttaaataaagtctcatggtattcaaaat 28371013  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttg 280  Q
    |||||||||||  ||  |||||||||||||||| ||||||    
T  28371014 cattcaaattttaaaggattgtttaataaattgaattttg 28371053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 23464840 - 23465075
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaaga--ttttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||||||||| || |||||||||||  |||||| || ||       |||||||||||||||| || ||| ||| |||| |         
T  23464840 ggggatgtattggattatgattctaaggaattttaaaagatttttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatataaaaa 23464939  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||  ||||||||||||| || ||||||||| |||||||| ||| | ||||||||||||| | || |||| ||       |||| |||||||||    
T  23464940 aagtcttgtattattcaatcaagattccttgtcatttaaaaaaagttttgtaatattcaatcaagactcttaatcacttaaaataagtctagtggtattc 23465039  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaat 271  Q
    |||| |||||||||||||||  ||||||||||||||    
T  23465040 aaaaccattcaaatttcgaaggattgtttaataaat 23465075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 147 - 318
Target Start/End: Original strand, 25446047 - 25446227
Alignment:
Q  147 tattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 246  Q
    ||||||||||||| | |||||||||| |||||| |||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||||||    
T  25446047 tattcaatcaagatt-tttgtcatttaaaaaaattcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattca 25446145  T
Q  247 aatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 318  Q
    |||||||||| ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||    
T  25446146 aatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 141 - 291
Target Start/End: Original strand, 53275829 - 53275979
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| |||||||| |||| | |||||||||| |||||||||||| |||||||||||||||||||| |||| ||       |||| ||| |||| |||||    
T  53275829 ttgtgttattcaataaagattatttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaaat 53275928  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 291  Q
    |||||||||||||||  ||||| ||||||||  |||||||  |||||||||    
T  53275929 cattcaaatttcgaaggattgtgtaataaatcagattttgatggattttgt 53275979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 222 - 359
Target Start/End: Original strand, 41320881 - 41321030
Alignment:
Q  222 gtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaa 311  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||||          ||||||||||||||| || ||||| |||||||  | ||||    
T  41320881 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatgttctagtgaaattttagtatgaaa 41320980  T
Q  312 aagtctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 359  Q
    ||||||||||| |||| |||||||||||| ||||||  ||||||||||||    
T  41320981 aagtctttcataaaaacatgagatttcttaagattgattttttcttttaa 41321030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 265 - 357
Target Start/End: Original strand, 11090428 - 11090520
Alignment:
Q  265 aataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttctttt 357  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||  ||||||||||| || |||| ||||||||||||  |||||||||||||||    
T  11090428 aataaattggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattgtttttctttt 11090520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 340
Target Start/End: Complemental strand, 41582007 - 41581796
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    ||||||| ||| ||| |||||||  |||||||||||||||||||||||  ||||||| | |||| ||||| | | ||       |||| |||||||| |     
T  41582007 gttttgtagtactcagtcaagacattttgtcattttaaaaaagtcttgtggtattcagttaagaattttcttaacttaaaaaaagtctcgtggtatttag 41581908  T
Q  238 aatcattcaaatttcgaattattgtttaataaattgg--------attttgtgggattttgtagtgtaattttaacaag-aaaaagtctttcatgaaaag 328  Q
    | |||||||||||| |||| |||||||||||||||||        ||||||||||||||| ||||| |||||||||| | ||||| | ||||||| |||     
T  41581907 agtcattcaaattttgaataattgtttaataaattggattgatatattttgtgggattttctagtgaaattttaacatgaaaaaaatatttcatgtaaac 41581808  T
Q  329 atgagatttctt 340  Q
    ||||||||||||    
T  41581807 atgagatttctt 41581796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 360
Target Start/End: Complemental strand, 36728023 - 36727937
Alignment:
Q  273 ggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaa 360  Q
    ||||||||| ||||||| ||||| ||||||||||||||||| ||||||||| | | ||||||||| |||||||||||||| |||||||    
T  36728023 ggattttgtaggattttttagtgaaattttaacaagaaaaaatctttcatg-agacatgagattttttgagattgttttttttttaaa 36727937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 195
Target Start/End: Original strand, 23987141 - 23987300
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| |||| ||||||||||||||||| |||||||||||       |||||||||||||||| || ||| ||||  ||||         
T  23987141 agggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaatactctttgtcattttaaaa 23987240  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaa 195  Q
      || ||| ||||||||||||| ||| ||  ||| || ||||||||||||  ||||||||    
T  23987241 aagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaa 23987300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 291
Target Start/End: Complemental strand, 25504899 - 25504705
Alignment:
Q  97 tcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaat 196  Q
    |||||||||||||||| || ||| ||| ||||||       || ||||| ||||||||||||| ||||  |||||| |||||| |||||   ||||||||    
T  25504899 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattcttgatcatttaaaaaaattcttgtgatattcaat 25504800  T
Q  197 caagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 291  Q
    ||||| | || |||| ||       |||  ||| |||||||||||||||||||||||||  ||||||||||||||  |||||||  |||||||||    
T  25504799 caagactcttaatcacttaaaaaaagtccagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 25504705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 317
Target Start/End: Complemental strand, 7249900 - 7249795
Alignment:
Q  222 gtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaa 311  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||    
T  7249900 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 7249801  T
Q  312 aagtct 317  Q
    ||||||    
T  7249800 aagtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 56445687 - 56445632
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    ||||||||||||||||||||| ||||||| || ||||||||||| |||||||||||    
T  56445687 ttagggggatgtattggattaagattctaaggaattttaaaagactttttaattat 56445632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 161
Target Start/End: Original strand, 11090273 - 11090401
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    |||||||||||||||| ||||  ||||| | |||||||||||| |||||||||||||       |||||||||||||||| || | | ||||| | ||      
T  11090273 cttagggggatgtatttgattgggattccaagggattttaaaatattttttaattatgagaatgtcttgtggtattcaatcaagaatctttgccacttaa 11090372  T
Q  133 nnnnngttttgtggtattcaatcaagact 161  Q
         ||||||||||||||||||||||||    
T  11090373 aaaaagttttgtggtattcaatcaagact 11090401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 11090339 - 11090408
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatc 210  Q
    ||||||||||||||||||| |||||| || || |||||||| |||  |||||||||||||| ||||||||    
T  11090339 ttgtggtattcaatcaagaatctttgccacttaaaaaaagttttgtggtattcaatcaagacttttcatc 11090408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 37915733 - 37915798
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagattttt 206  Q
    ||||||||||||||||||||| ||||| | || ||||||||||||  |||||||||||||| ||||    
T  37915733 ttgtggtattcaatcaagactttttgtaacttaaaaaaagtcttgtggtattcaatcaagactttt 37915798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 467773 - 467821
Alignment:
Q  41 gatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    |||||||||||||||||||||  || |||||||||||||||||||||||    
T  467773 gatgtattggattatgattcttaggaattttaaaagattttttaattat 467821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 352
Target Start/End: Complemental strand, 27454208 - 27454073
Alignment:
Q  227 gtggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 316  Q
    ||||||||||||||||||||||||| |||  ||| ||||||||||          || ||||||||| ||||| ||||| ||||||  || |||||||||    
T  27454208 gtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtggaattttctagtgaaattttggcatgaaaaagtc 27454109  T
Q  317 tttcatgaaaagatgagatttcttgagattgttttt 352  Q
    ||||||||||| || | |||| || |||||||||||    
T  27454108 tttcatgaaaacataatatttgttaagattgttttt 27454073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 24736335 - 24736382
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    ||||||||||||| ||||||| || |||||||||||||||||||||||    
T  24736335 atgtattggattaggattctaaggaattttaaaagattttttaattat 24736382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 28483870 - 28483921
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    |||||||||||| |||| ||||||||| |||||||||||| |||||||||||    
T  28483870 ggggatgtattgaattaggattctatgagattttaaaagactttttaattat 28483921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 34141685 - 34141634
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    ||||||||||||||||| |||| |||| |||||||||||| |||||||||||    
T  34141685 ggggatgtattggattaagattttatgagattttaaaagactttttaattat 34141634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 46635900 - 46635804
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    |||||||||||||||||||||||||   |||| |||||| ||||| | ||||||||||||||| ||  ||||||       ||||||||||||||||    
T  46635900 ttgtggtattcaatcaagactctttccaatttaaaaaaaatcttgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 46635804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 7007318 - 7007384
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcatttt--aaaaaagtcttgaagtattcaatcaagatt 203  Q
    |||||||||||||||||||||||||||| ||| |||  ||||||||||||   |||||||||||||||    
T  7007318 gttttgtggtattcaatcaagactcttt-tcaatttaaaaaaaagtcttgtgttattcaatcaagatt 7007384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 195
Target Start/End: Complemental strand, 32684261 - 32684108
Alignment:
Q  41 gatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtt 140  Q
    ||||||||| |||| |||||||| | |||||||| || |||||||||||       ||||||||||||||||||| | | ||||  ||||       ||     
T  32684261 gatgtattgaattaggattctatagaattttaaaggactttttaattatgaaaaagtcttgtggtattcaattaagattctttgtcattttaaaaaagta 32684162  T
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaa 195  Q
    ||| ||||||||||||||||| ||  ||| |||||||||||||||  ||||||||    
T  32684161 ttgaggtattcaatcaagacttttcatca-tttaaaaaagtcttgtggtattcaa 32684108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 1112841 - 1112937
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    ||||| |||||||||||||||||||   |||| |||||||| ||| | ||||||||||||||| ||  ||||||       ||||||||||||||||    
T  1112841 ttgtgttattcaatcaagactctttccgatttaaaaaaagtattgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 1112937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 6334518 - 6334463
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    |||| ||||||| |||||||| ||||||| | |||||||||||| |||||||||||    
T  6334518 ttagagggatgtgttggattaggattctaagagattttaaaagaatttttaattat 6334463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 6335468 - 6335413
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    |||| ||||||| |||||||| ||||||| | |||||||||||| |||||||||||    
T  6335468 ttagagggatgtgttggattaggattctaagagattttaaaagaatttttaattat 6335413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 194
Target Start/End: Complemental strand, 39307469 - 39307374
Alignment:
Q  99 ttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattca 194  Q
    |||||||||||||| || | ||||||| ||||       || ||||||||||||||||||| ||||  |||||| ||||||||||||  |||||||    
T  39307469 ttgtggtattcaatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattca 39307374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 42786716 - 42786758
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtct 183  Q
    ||||||||||||||||||||||||  |||||| ||||||||||    
T  42786716 ttgtggtattcaatcaagactcttaatcatttaaaaaaagtct 42786758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 7250031 - 7249968
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcatttt--aaaaaagtcttgaagtattcaatcaagatt 203  Q
    ||||||||||||||||||||||||| ||| |||  ||||||||||||   |||||||||||||||    
T  7250031 ttgtggtattcaatcaagactcttt-tcaatttaaaaaaaagtcttgtgttattcaatcaagatt 7249968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 36728133 - 36728080
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    ||||| ||| |||||||||| ||||||   ||||||||||||||||||||||||    
T  36728133 aggggaatgaattggattataattctaacagattttaaaagattttttaattat 36728080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 42786654 - 42786699
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    |||| |||||||||| ||||||||| |||||||||||||| |||||    
T  42786654 gggggtgtattggatcatgattctaagggattttaaaagacttttt 42786699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 201; Significance: 1e-109; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 34 - 362
Target Start/End: Original strand, 31895579 - 31895917
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||       
T  31895579 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 31895678  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       ||||||||||||    
T  31895679 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 31895778  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 323  Q
    ||||||||||||||||||||||  ||||||||||||||          |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31895779 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcatg 31895878  T
Q  324 aaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  31895879 aaaagatgagatttcttgagattgtttttattttaaaag 31895917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 36 - 362
Target Start/End: Complemental strand, 14262753 - 14262417
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| ||||||| |||||||||||||| |||||||||||       |||||||||||||||| || | ||||||||| ||         
T  14262753 agggggatgtattggattaggattctacgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagattttttgcaacttaaaaa 14262654  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||       ||||||||||||||    
T  14262653 aagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattc 14262554  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    ||||||||| ||||||||||  ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14262553 aaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 14262454  T
Q  326 aagatgagatttcttgagattgtttttcttttaaaag 362  Q
    |||||| ||||||||||||||||||||||||||||||    
T  14262453 aagatgggatttcttgagattgtttttcttttaaaag 14262417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 38 - 340
Target Start/End: Original strand, 34773296 - 34773608
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||           
T  34773296 ggggatgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaa 34773395  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||        |||||||||||||||    
T  34773396 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaa 34773495  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||||||||||  ||||||||||||||          ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34773496 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtctttcatgaaaa 34773595  T
Q  328 gatgagatttctt 340  Q
    |||||||||||||    
T  34773596 gatgagatttctt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 141 - 361
Target Start/End: Complemental strand, 30385272 - 30385054
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| | ||||||||| ||       |||||||||||||||||||    
T  30385272 ttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaat 30385173  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 340  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||    
T  30385172 cattcaaatttcgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaaca--acaaagtctttcatgaaaagatgagatttctt 30385075  T
Q  341 gagattgtttttcttttaaaa 361  Q
    |||||||||||||||||||||    
T  30385074 gagattgtttttcttttaaaa 30385054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 141 - 362
Target Start/End: Complemental strand, 34759266 - 34759034
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaa-gtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||       ||||||||||||||||||    
T  34759266 ttgtggtattcaatcaagactctttgtcattttaaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaa 34759167  T
Q  240 tcattcaaatttcgaattattgtttaataaattggat----------tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 329  Q
    ||||||||||||| ||  |||||||||||||||||||          ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34759166 tcattcaaatttccaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaga 34759067  T
Q  330 tgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||| |||||||||||||||    
T  34759066 tgagatttcttgagattatttttcttttaaaag 34759034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 225 - 362
Target Start/End: Original strand, 31067567 - 31067704
Alignment:
Q  225 ttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 324  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  31067567 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataa 31067666  T
Q  325 aaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||||| |||||||||    
T  31067667 aaagatgagatttcttgagattgtttttattttaaaag 31067704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 144 - 362
Target Start/End: Original strand, 7497069 - 7497296
Alignment:
Q  144 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcat 243  Q
    ||||||||||||||||||  |||  | || ||||||||||||  |||||||||||||||||||||||| ||       ||||||||||||||||||||||    
T  7497069 tggtattcaatcaagacttgttgcaacttaaaaaaagtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcat 7497168  T
Q  244 tcaaatttcgaattattgtttaataaattggattttg--------tg-ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 334  Q
    ||||||||||||  | |||||||||||||||||||||        || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7497169 tcaaatttcgaaggagtgtttaataaattggattttgatggattttgtggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 7497268  T
Q  335 tttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||| |||||||||||||||    
T  7497269 tttcttgagattatttttcttttaaaag 7497296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 34 - 352
Target Start/End: Complemental strand, 6197800 - 6197472
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    |||||||| |||||||||| ||||||||| |||||||||||| | ||||| || ||       || ||||||||||||| || ||| ||| ||||||       
T  6197800 ttaggggggtgtattggatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctttccaatttaaa 6197701  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| |||||||    
T  6197700 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 6197601  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 323  Q
    ||||||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||    
T  6197600 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 6197501  T
Q  324 aaaagatgagatttcttgagattgttttt 352  Q
    |||| ||||||||||||  ||||||||||    
T  6197500 aaaacatgagatttcttaggattgttttt 6197472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 242 - 362
Target Start/End: Complemental strand, 4200541 - 4200421
Alignment:
Q  242 attcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 341  Q
    ||||||||||||||  |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 4200442  T
Q  342 agattgtttttcttttaaaag 362  Q
    ||||||||||| |||||||||    
T  4200441 agattgtttttattttaaaag 4200421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 38 - 361
Target Start/End: Complemental strand, 2301056 - 2300722
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||           
T  2301056 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaa 2300957  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       ||||  ||||||| ||    
T  2300956 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattgaa 2300857  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  2300856 aatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 2300757  T
Q  328 gatgagatttcttgaga-ttgtttttcttttaaaa 361  Q
     ||||||||||||  || || ||||||||||||||    
T  2300756 catgagatttcttaggatttttttttcttttaaaa 2300722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 33 - 352
Target Start/End: Original strand, 1391506 - 1391835
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    |||||| || |||||||||| |||||||||  |||||||||| || ||||| || ||       |||||||||||||||| || ||| ||| ||||||      
T  1391506 cttaggtgggtgtattggatcatgattctaaaggattttaaatgacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaa 1391605  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
         || ||||| ||||||||||||| || ||||||||| || |||||||||  |||||||||||||| | || |||| ||       |||| ||||||    
T  1391606 aaaaagtcttgtgttattcaatcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 1391705  T
Q  233 ttcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 322  Q
    ||||||||||||||||||| |||  ||||||||||||||          |||||||||||||||||| ||||| ||||||  || |||||||||||||||    
T  1391706 ttcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcat 1391805  T
Q  323 gaaaagatgagatttcttgagattgttttt 352  Q
    ||||| |||||||| |||  ||||||||||    
T  1391806 gaaaacatgagattccttaggattgttttt 1391835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 50 - 293
Target Start/End: Original strand, 7051744 - 7051987
Alignment:
Q  50 gattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtat 149  Q
    ||||| ||||||| | |||||||||||| ||||| || ||       ||||||| |||||||| || ||| ||||||| ||       || |||||||||    
T  7051744 gattaggattctaagagattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttgcaacttaaaaaaagtcttgtggtat 7051843  T
Q  150 tcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaat 249  Q
     | ||||||| |||||||||||| ||||||||||||  |||| ||||||||| | ||||||| ||       ||| |||| |||||||||||||||||||    
T  7051844 acgatcaagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaaaatcattcaaat 7051943  T
Q  250 ttcgaattattgtttaataaattggattttgtgggattttgtag 293  Q
    ||||||  |||||||||||||||||||||||  |||||||||||    
T  7051944 ttcgaaggattgtttaataaattggattttgatggattttgtag 7051987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 36 - 352
Target Start/End: Original strand, 29076482 - 29076810
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaaga-ttttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnn 134  Q
    |||||| |||||||||| ||||||||| | |||||||||||| |||||| || ||       ||||||| |||||||| || ||| ||| ||||||        
T  29076482 aggggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaat 29076581  T
Q  135 nnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatca-tttnnnnnnngtcttgtggtat 233  Q
       || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||| ||||| || |||| ||        |||| || ||||    
T  29076582 aaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtat 29076681  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 323  Q
    ||||||||||||||||||||||  ||||||||||||||          |||||||| | ||||||| ||||| ||||||| || |||||| ||||||||     
T  29076682 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcata 29076781  T
Q  324 aaaagatgagatttcttgagattgttttt 352  Q
    |||| ||||||||| ||  ||||||||||    
T  29076782 aaaacatgagattttttaggattgttttt 29076810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 36 - 352
Target Start/End: Original strand, 29111455 - 29111784
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaaga-ttttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnn 134  Q
    |||||| |||||||||| ||||||||| | |||||||||||| |||||| || ||       ||||||| |||||||| || ||| ||| ||||||        
T  29111455 aggggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaat 29111554  T
Q  135 nnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcattt--nnnnnnngtcttgtggta 232  Q
       || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||| ||||| || |||| ||         |||| || |||    
T  29111555 aaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctagtagta 29111654  T
Q  233 ttcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 322  Q
    |||||||||||||||||||||||  ||||||||||||||          |||||||| | ||||||| ||||| ||||||| || |||||| ||||||||    
T  29111655 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcat 29111754  T
Q  323 gaaaagatgagatttcttgagattgttttt 352  Q
     |||| ||||||||| ||  ||||||||||    
T  29111755 aaaaacatgagattttttaggattgttttt 29111784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 147 - 332
Target Start/End: Original strand, 28002661 - 28002856
Alignment:
Q  147 tattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 246  Q
    ||||||||||||| | |||||||||| |||||||||||   |||||||||||||| | || |||| ||       |||| ||| ||||||||||||||||    
T  28002661 tattcaatcaagattttttgtcatttaaaaaaagtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattca 28002760  T
Q  247 aatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 332  Q
    ||||| |||  ||||||||||||||          |||||||||||  ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  28002761 aatttggaaggattgtttaataaatcagattttgatggattttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 28002856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 141 - 283
Target Start/End: Original strand, 3848202 - 3848342
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||| ||| |||||||||| ||| |||| |||  ||| |||||||||| ||  ||||| ||       || ||||||||||||||||    
T  3848202 ttgtggtattcaatcaaaactttttgtcatttaaaacaagtattgtggtaatcaatcaagactt--catcacttaaaaaaagttttgtggtattcaaaat 3848299  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgg 283  Q
    |||| |||||| |||| |||||||||||||||| |||||||||    
T  3848300 catttaaattttgaatgattgtttaataaattgaattttgtgg 3848342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 38 - 195
Target Start/End: Original strand, 7497005 - 7497162
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||||||||||||||||  |||||||| ||||||||||||||||||||||||       | || ||||||||||| || |||| |||||| ||           
T  7497005 ggggatgtattggattagaattctatgagattttaaaagattttttaattatgaaaaagtattctggtattcaatcaagacttgttgcaacttaaaaaaa 7497104  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaa 195  Q
    || ||||||||||||||||||| | ||  ||| || ||||||||||||  ||||||||    
T  7497105 gtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaa 7497162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 30385341 - 30385290
Alignment:
Q  32 tcttagggggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  30385341 tcttagggggatgtattggattaggattctatgagattttaaaagatttttt 30385290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 251
Target Start/End: Original strand, 656957 - 657065
Alignment:
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatc 241  Q
    |||| ||||||||||||| |||||| ||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||| |||||    
T  656957 tgtgttattcaatcaagattctttg-catttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatc 657055  T
Q  242 attcaaattt 251  Q
    ||||||||||    
T  657056 attcaaattt 657065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 28002613 - 28002678
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagattttt 206  Q
    |||| ||||||||||||||||||||   |||| ||||||||||||   ||||||||||||||||||    
T  28002613 ttgtcgtattcaatcaagactctttccaatttaaaaaaagtcttgtcttattcaatcaagattttt 28002678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 352
Target Start/End: Original strand, 2238678 - 2238722
Alignment:
Q  308 gaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 352  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||    
T  2238678 gaaaaaatctttcatgaaaacatgagatttcttaagattgttttt 2238722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 3848114 - 3848177
Alignment:
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagattttt 206  Q
    ||||||||||||||||| ||||||  | || ||||||||||||  |||||||||||| ||||||    
T  3848114 gtggtattcaatcaagattctttgcaacttaaaaaaagtcttgtggtattcaatcaatattttt 3848177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 34759334 - 34759284
Alignment:
Q  32 tcttagggggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    |||||||||| |||||||||||| ||||||||| |||||||||||| |||||    
T  34759334 tcttaggggg-tgtattggattaggattctatgagattttaaaagacttttt 34759284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 201; Significance: 1e-109; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 34 - 362
Target Start/End: Original strand, 6312451 - 6312789
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||       
T  6312451 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 6312550  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||    
T  6312551 aaaagttttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 6312650  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 323  Q
    ||||||||||||||||||||||  ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6312651 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 6312750  T
Q  324 aaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  6312751 aaaagatgagatttcttgagattgtttttattttaaaag 6312789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 35 - 362
Target Start/End: Original strand, 25612035 - 25612372
Alignment:
Q  35 tagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnn 134  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||        
T  25612035 tagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagactttttgcaatttaaaa 25612134  T
Q  135 nnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtatt 234  Q
       || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||       |||||||||||||    
T  25612135 aaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtatt 25612234  T
Q  235 caaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 324  Q
    |||||||||||||||||| ||  ||||||||||||||          ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25612235 caaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaaaagtctttcatga 25612334  T
Q  325 aaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||||| |||||||||    
T  25612335 aaagatgagatttcttgagattgtttttattttaaaag 25612372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 32 - 362
Target Start/End: Complemental strand, 48177787 - 48177447
Alignment:
Q  32 tcttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttn 131  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||  ||||||||||||       |||||||||||||||| || ||||||||||| ||     
T  48177787 tcttaggggaatgtattggattaagattctatgggattttaaaatgttttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaactta 48177688  T
Q  132 nnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggt 231  Q
           | ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||       ||||||||||    
T  48177687 aaaaaaatcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtcttgtggt 48177588  T
Q  232 attcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 321  Q
    ||||||||||||||||||||||||| ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48177587 attcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 48177488  T
Q  322 tgaaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  48177487 tgaaaagatgagatttcttgagattgtttttcttttaaaag 48177447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 38 - 362
Target Start/End: Complemental strand, 29396707 - 29396373
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| |||||||||| ||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||           
T  29396707 ggggatgtattggattaggattctatggtattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaa 29396608  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
     | || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||||||    
T  29396607 atcttttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 29396508  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||||||||||  ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29396507 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 29396408  T
Q  328 gatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||| |||||||||    
T  29396407 gatgagatttcttgagattgtttttgttttaaaag 29396373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 34 - 362
Target Start/End: Complemental strand, 15835376 - 15835038
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    |||| |||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||       
T  15835376 ttagagggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 15835277  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||        |||||||||||    
T  15835276 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtat 15835177  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatg 323  Q
    ||||||||||||||||| | ||  |||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||    
T  15835176 tcaaaatcattcaaattgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatg 15835077  T
Q  324 aaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  15835076 aaaagatgagatttcttgagattgtttttgttttaaaag 15835038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 34 - 361
Target Start/End: Complemental strand, 9322823 - 9322486
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||       
T  9322823 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 9322724  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
          ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||       ||| ||||||||    
T  9322723 aaaaaatttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcgatcaagacttttcatcatttaaaaaaagtcctgtggtat 9322624  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 323  Q
    |||||||||||||||||| |||  ||||||||||||||          |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9322623 tcaaaatcattcaaatttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatg 9322524  T
Q  324 aaaagatgagatttcttgagattgtttttcttttaaaa 361  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  9322523 aaaagatgagatttcttgagattgtttttattttaaaa 9322486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 34 - 362
Target Start/End: Original strand, 29219165 - 29219491
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||       
T  29219165 ttagggggatgtattggattaggattatatggaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaa 29219264  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || |||||||||||||||||||||||  |||||||||||||||||||||  ||||||||||||| ||||||||| ||       ||||||||||||    
T  29219265 aaaagtcttgtggtattcaatcaagactct--gtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 29219362  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 333  Q
    |||||||||||||||||  |||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29219363 tcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgag 29219462  T
Q  334 atttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||||||    
T  29219463 atttcttgagattgtttttcttttaaaag 29219491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 46 - 362
Target Start/End: Original strand, 18798380 - 18798686
Alignment:
Q  46 attggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtg 145  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||       || |||||    
T  18798380 attggattaggattctatgagattttaaaagactttttaattatgaaaatgtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtg 18798479  T
Q  146 gtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattc 245  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||||||||||||||    
T  18798480 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattc 18798579  T
Q  246 aaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 345  Q
    ||||||||||  |||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18798580 aaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctagagat 18798669  T
Q  346 tgtttttcttttaaaag 362  Q
    ||||||| |||||||||    
T  18798670 tgtttttgttttaaaag 18798686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 36 - 362
Target Start/End: Complemental strand, 28387714 - 28387378
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||| |||||||||| |||||||||||||||||||||| |||||||||||       |||| ||||||||||| || ||||||||||||||         
T  28387714 agggggatttattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaa 28387615  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || || |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||        |||||||||||||    
T  28387614 aagtcttttggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattc 28387515  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    ||| ||||||||||||||||  |||||||||||||||||||||||          |||||||||||||| |||||||||||| |||||||||||||| ||    
T  28387514 aaattcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaa 28387415  T
Q  326 aagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||||| |||||||||    
T  28387414 aagatgagatttcttgagattgtttttgttttaaaag 28387378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 38 - 362
Target Start/End: Original strand, 46327923 - 46328257
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||| ||||||||| |||||||||||||||||||||| |||||||||||       ||||||| |||||||| || ||||||||||| ||           
T  46327923 ggggatgcattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtgttattcaatcaaaactttttgcaacttaaaaaaa 46328022  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||| |||||||||||    
T  46328023 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaa 46328122  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||||||||||  |||||||||| |||          ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46328123 aatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaa 46328222  T
Q  328 gatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||| |||||||| || |||||||||||||||||||    
T  46328223 gataagatttctcgaaattgtttttcttttaaaag 46328257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 99 - 362
Target Start/End: Original strand, 51701522 - 51701795
Alignment:
Q  99 ttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatca 198  Q
    |||||||||||||| || ||||||||||||||       || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  51701522 ttgtggtattcaatcaagactttttgcaatttaaaaatagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatca 51701621  T
Q  199 agatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattt 288  Q
    ||| ||||||||||||       ||||||||||||||||||||||||||||||||||  ||||||||||||||          |||||||||||||||||    
T  51701622 agacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattt 51701721  T
Q  289 tgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  51701722 tgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattttttgagattgtttttattttaaaag 51701795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 141 - 362
Target Start/End: Complemental strand, 38536305 - 38536084
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||| | ||       |||||||||||||||||||    
T  38536305 ttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaat 38536206  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 340  Q
     ||||||||||| ||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38536205 tattcaaatttcaaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 38536106  T
Q  341 gagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||    
T  38536105 gagattgtttttcttttaaaag 38536084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 141 - 362
Target Start/End: Complemental strand, 38558523 - 38558302
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||| | ||       |||||||||||||||||||    
T  38558523 ttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaat 38558424  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 340  Q
     ||||||||||| ||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38558423 tattcaaatttcaaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 38558324  T
Q  341 gagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||    
T  38558323 gagattgtttttcttttaaaag 38558302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 38 - 362
Target Start/End: Original strand, 45272468 - 45272790
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||       | |||||||||||||| || ||||||||||| ||           
T  45272468 ggggatgtattggattaagattctatgggattttaaaagactttttaattatgaaaaaatattgtggtattcaataaagactttttgcaacttaaaaaaa 45272567  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
     | |||| |||||||||||| |||||||||||||||||||| ||||||| |||||||||||||| ||||||||| ||        ||| |||||||||||    
T  45272568 atcttgttgtattcaatcaaaactctttgtcattttaaaaa-gtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatctcgtggtattcaa 45272666  T
Q  238 aatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 337  Q
    ||| ||| ||||||||||  || |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| || ||||||||||||||    
T  45272667 aattatttaaatttcgaaggat-gtttaataaattggattttgtgagattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagattt 45272765  T
Q  338 cttgagattgtttttcttttaaaag 362  Q
     ||||||||||||||||||||||||    
T  45272766 tttgagattgtttttcttttaaaag 45272790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 41 - 336
Target Start/End: Complemental strand, 5495412 - 5495117
Alignment:
Q  41 gatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtt 140  Q
    |||||||||||||| ||||||||| |||||||||| | |||||||||||       || ||||||||||||| || ||||||||||| ||       ||     
T  5495412 gatgtattggattaggattctatgagattttaaaaaactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaacttaaaggaagtc 5495313  T
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||| ||||||||||||||    
T  5495312 ttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaat 5495213  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 336  Q
    |||| ||||||| ||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  5495212 catttaaatttcaaaggattatttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 45 - 362
Target Start/End: Complemental strand, 48669084 - 48668770
Alignment:
Q  45 tattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgt 144  Q
    |||||||||| |||  ||| |||||||||||||||||||||||||       | ||| |||||| ||| || |  ||||| |||||       |||||||    
T  48669084 tattggattaggatattataggattttaaaagattttttaattatgaaaaggttttgaggtatttaatcaaaaaattttgtaatttaaaaaacgttttgt 48668985  T
Q  145 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 244  Q
    | ||||||||||||||||||||||||||||||||||| |||| |||||||||||   |||||||||| ||       |||  |||||||||||||| |||    
T  48668984 gatattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatca---tttttcatcacttaaaaaaagtcacgtggtattcaaaattatt 48668888  T
Q  245 caaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgaga 344  Q
    |||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  48668887 caaatttcgaaagattgtttaataaattggattttgtgggattctgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttgttggga 48668788  T
Q  345 ttgtttttcttttaaaag 362  Q
    ||||||||||||||||||    
T  48668787 ttgtttttcttttaaaag 48668770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 33 - 279
Target Start/End: Original strand, 49230762 - 49231008
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    |||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||       || ||||||||||||| || ||||||||||| ||      
T  49230762 cttagggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaaattaa 49230861  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
         || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||||||||||    
T  49230862 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 49230961  T
Q  233 ttcaaaatcattcaaatttcgaattattgtttaataaattggatttt 279  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||||    
T  49230962 ttcaaaatcattcaaatttcgaaggattatttaataaattggatttt 49231008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 38 - 361
Target Start/End: Complemental strand, 9577751 - 9577418
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| ||||| | |||||||||||||| |||||||| ||       | |||||||||||||| || ||| ||||||| ||           
T  9577751 ggggatgtattggattaggattcgaagggattttaaaagactttttaatgatgaaaaagttttgtggtattcaatcaagactatttgcaacttaaaaaaa 9577652  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || |||| ||||||||||||||| |||||||||||||||||||||||||  |||| |||||| | |||| |||| ||       |||||||| |||||||    
T  9577651 gtattgttgtattcaatcaagaccctttgtcattttaaaaaagtcttgagatattaaatcaaaactttttatcacttaaaaaaagtcttgtgatattcaa 9577552  T
Q  238 aatcattcaaatttcgaattattgtttaataaattggat----------tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    |||||||||||||| |||  |||||||||||||||||||          |||||| |||||| ||||| |||||||  | |||||| |||||||||||||    
T  9577551 aatcattcaaatttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaaaaatctttcatgaaaa 9577452  T
Q  328 gatgagatttcttgagattgtttttcttttaaaa 361  Q
     ||||||||||||| |||||||||||||||||||    
T  9577451 catgagatttcttgggattgtttttcttttaaaa 9577418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 37 - 242
Target Start/End: Complemental strand, 8141448 - 8141243
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    ||||||||||||| |||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||          
T  8141448 gggggatgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 8141349  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||| ||       |||||| ||||||||    
T  8141348 agttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactattcatcacttaaaaaaagtcttgaggtattca 8141249  T
Q  237 aaatca 242  Q
    ||||||    
T  8141248 aaatca 8141243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 37 - 359
Target Start/End: Original strand, 21222028 - 21222361
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    ||||| |||||||||| ||||||||| |||||||||||||  ||||| || ||       |||||||||||||||| || ||| ||| ||||||          
T  21222028 ggggggtgtattggatcatgattctaagggattttaaaaggcttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaa 21222127  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
     |||| ||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| | ||||||||    
T  21222128 agttt-gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattca 21222226  T
Q  237 aaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 326  Q
    |||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||    
T  21222227 aaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaa 21222326  T
Q  327 agatgagatttcttgagattgt--ttttcttttaa 359  Q
    | ||||||||||||  ||||||  |||||||||||    
T  21222327 acatgagatttcttaggattgttattttcttttaa 21222361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 38 - 352
Target Start/End: Complemental strand, 28824691 - 28824368
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| |||  |||||           
T  28824691 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaaa 28824592  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||||| | |||||||||| ||||||||||||  |||||||||||||| | || |||| ||       ||||||||||||||||    
T  28824591 gtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaa 28824492  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||| | |||||||||| |||||||||||| || ||||    
T  28824491 aatcattcaaatttcgaag-attgtttaataaatcagattttgatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaa 28824393  T
Q  328 gatgagatttcttgagattgttttt 352  Q
     ||||||||||||  ||||||||||    
T  28824392 catgagatttcttaggattgttttt 28824368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 43 - 340
Target Start/End: Original strand, 35279558 - 35279865
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| | |||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       |  ||    
T  35279558 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagactt 35279657  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||    
T  35279658 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaaaatca 35279757  T
Q  243 ttcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 332  Q
    || ||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||| |||| |||||||||||||||||||| ||||    
T  35279758 tttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaacatga 35279857  T
Q  333 gatttctt 340  Q
    ||||||||    
T  35279858 gatttctt 35279865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 36 - 352
Target Start/End: Complemental strand, 45760331 - 45760004
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||| |||||||||| ||||||||| |||||||||||||||||||| || ||       |||||||||||||||| || ||| ||| ||||||         
T  45760331 aggggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaaaactcttttcaatttaaaaa 45760232  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaa-gtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtatt 234  Q
      || ||||| ||||||||||||| ||||||||| ||||||||| ||| ||  |||||||||||||| | || |||| ||       |||| ||||||||    
T  45760231 aagtcttgtgttattcaatcaagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatt 45760132  T
Q  235 caaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 324  Q
    |||||||||||||| ||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||| ||||    
T  45760131 caaaatcattcaaacttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatga 45760032  T
Q  325 aaagatgagatttcttgagattgttttt 352  Q
    ||| ||||||||||||  ||||||||||    
T  45760031 aaacatgagatttcttaggattgttttt 45760004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 34 - 350
Target Start/End: Complemental strand, 35679451 - 35679125
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||| || ||||||| || |||||| || |||||||||||||| ||||| || ||       |||||||||||||||| ||  || ||| ||||||       
T  35679451 ttaggagggtgtattgaatcatgattttaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaaggctcttttcaatttaaa 35679352  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||||||||||||||||| |||||||||||| |||||| ||||| ||||||||||||||| | || |||| ||       ||| ||||||||    
T  35679351 aaaagtcttgtggtattcaatcaagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtat 35679252  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 323  Q
    ||||||||||||||||||||||  ||||||||||||||          |||||||  ||||||||| ||||| ||||||| || ||||||||||||||||    
T  35679251 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcatg 35679152  T
Q  324 aaaagatgagatttcttgagattgttt 350  Q
    || | |||||||||||| |||||||||    
T  35679151 aagacatgagatttcttaagattgttt 35679125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 97 - 352
Target Start/End: Complemental strand, 19452068 - 19451803
Alignment:
Q  97 tcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaat 196  Q
    |||||||||||||||| || ||| ||| ||||||       || ||||| ||||||||||||| |||||||||||| ||||||||||||  ||||| |||    
T  19452068 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaat 19451969  T
Q  197 caagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggat 286  Q
    ||||| | || |||| ||       |||| |||||||||||||||||||||||||||||  || |||||||||||          |||||||||||||||    
T  19451968 caagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggatcgtttaataaatcagattttgatggattttgtgggat 19451869  T
Q  287 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 352  Q
    ||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  19451868 tttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgttttt 19451803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 33 - 352
Target Start/End: Complemental strand, 50192875 - 50192545
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    ||||||||| ||||||| || ||||||||| || ||||||||||| ||||| |||||       |||||||||||||||| || | | ||| ||||||      
T  50192875 cttaggggggtgtattgaatcatgattctaaggaattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagattctttccaatttaa 50192776  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggt 231  Q
          | ||||| ||||||||||||| || ||||||||||||||||||||||  |||||||||||||| | || |||| ||        |||| |||||    
T  50192775 aaaaaatcttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggt 50192676  T
Q  232 attcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 321  Q
    |||||||||||||||||||| |||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||    
T  50192675 attcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 50192576  T
Q  322 tgaaaagatgagatttcttgagattgttttt 352  Q
    |||||| ||||||||| ||  ||||||||||    
T  50192575 tgaaaacatgagattttttaggattgttttt 50192545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 37 - 359
Target Start/End: Original strand, 33025392 - 33025716
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    ||||| |||||||||| ||||||||| | || ||||||||| ||||| || ||       |||||||||||||||| || |  |||| ||||||          
T  33025392 ggggggtgtattggatcatgattctaagagaatttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaaaaaattttccaatttaaaaaa 33025491  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagattt-ttcatcatttnnnnnnngtcttgtggtattc 235  Q
     |||||||  ||||||||||||| |||||| |||||| ||||| |||||  |||||||||||| |  | || |||| ||       ||||||||||||||    
T  33025492 agttttgtcttattcaatcaagattctttgacatttttaaaaattcttgtggtattcaatcaaaaactcttaatcacttaaaaaaagtcttgtggtattc 33025591  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 335  Q
    |||||||||||||||| |||  ||||||||||| ||  |||||||||||||||| || |  ||||||| || |||||||||||||||||||| |||||||    
T  33025592 aaaatcattcaaattttgaaggattgtttaatacatcagattttgtgggattttctaataaaattttagcatgaaaaagtctttcatgaaaacatgagat 33025691  T
Q  336 ttcttgagattgt-ttttcttttaa 359  Q
    |||||  |||||| |||||||||||    
T  33025692 ttcttatgattgtgttttcttttaa 33025716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 141 - 359
Target Start/End: Complemental strand, 37014856 - 37014628
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||||||||||| |||||||||||||||||  || ||||||||  |||||||||||| ||| ||||||| ||       |||||||| ||||||||||    
T  37014856 ttgtggtattcaattaagactctttgtcatttagaagaagtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaaaat 37014757  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||||||||| ||  ||||||| ||||||          |||||||||| ||||||| ||||| ||||||| || |||||||||| |||| |||| ||    
T  37014756 cattcaaatttctaaagattgttttataaattgaattttgatggattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaaaacat 37014657  T
Q  331 gagatttcttgagattgtttttcttttaa 359  Q
    |||||||||| ||||||||||||| ||||    
T  37014656 gagatttcttaagattgtttttctcttaa 37014628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 43 - 352
Target Start/End: Complemental strand, 49198581 - 49198264
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| || ||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       || ||    
T  49198581 tgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaa-gtctt 49198483  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| |||||||| |||  ||||||||| |||| | || |||| ||       ||   ||||||||||||||||    
T  49198482 gtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaat-aagactcttaatcacttaaaaaaagttcagtggtattcaaaatca 49198384  T
Q  243 ttcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 332  Q
    |||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  49198383 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 49198284  T
Q  333 gatttcttgagattgttttt 352  Q
     |||||||  ||||||||||    
T  49198283 tatttcttaggattgttttt 49198264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 142 - 352
Target Start/End: Complemental strand, 6304468 - 6304247
Alignment:
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagattt-ttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||  |||||||| ||| |  | || |||| ||       |||| ||||||||||||||    
T  6304468 tgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaaat 6304369  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||    
T  6304368 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 6304269  T
Q  331 gagatttcttgagattgttttt 352  Q
    || |||||||  ||||||||||    
T  6304268 gaaatttcttatgattgttttt 6304247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 36 - 244
Target Start/End: Original strand, 22183249 - 22183457
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||| |||||||||| |||||||||  ||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||         
T  22183249 aggggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaa 22183348  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      |||||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||||| || |||| ||       |||| |||||||||    
T  22183349 aagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattc 22183448  T
Q  236 aaaatcatt 244  Q
    |||||||||    
T  22183449 aaaatcatt 22183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 141 - 352
Target Start/End: Original strand, 47780695 - 47780916
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| | | |||||||| ||||||||| ||  |||||||||||||| | || |||| ||       |||| ||| ||||||||||    
T  47780695 ttgtgttattcaatcaagattatatgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaat 47780794  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||||| ||  ||  ||||||||||||||          |||||||||||||||||| ||||| |||||||||| |||||||| ||||||||||| ||    
T  47780795 cattcaaaattaaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacat 47780894  T
Q  331 gagatttcttgagattgttttt 352  Q
    |||||||||| |||||||||||    
T  47780895 gagatttcttaagattgttttt 47780916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 37 - 291
Target Start/End: Original strand, 730029 - 730283
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    ||||| |||||||||| ||||||||| |||||||||||||| |||||  | ||       |||||||||||||||| || ||| ||| ||||||          
T  730029 ggggggtgtattggatcatgattctaagggattttaaaagactttttt-tcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 730127  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatca-tttnnnnnnngtcttgtggtattc 235  Q
     || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||        |||| |||||||||    
T  730128 agtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattc 730227  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 291  Q
    |||||||||||||||||||   ||||||||||||||  |||||||  |||||||||    
T  730228 aaaatcattcaaatttcgacgaattgtttaataaatcagattttgatggattttgt 730283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 43 - 352
Target Start/End: Complemental strand, 47654668 - 47654346
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaaga-ttttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngt-t 140  Q
    |||||||||| ||||||||| |||||||||||||| |||||| || ||       ||||||||||||| || || ||| ||| ||||||       || |    
T  47654668 tgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcgatcaagactctttccaatttaaaaaaagtct 47654569  T
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggtattcaaaa 239  Q
    ||||| ||||||||||||| |||||||||||| ||| ||||||||  |||||||||||| | | || |||| ||        |||| |||||||||||||    
T  47654568 ttgtgttattcaatcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaa 47654469  T
Q  240 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 329  Q
    | ||||||||||||||  ||||||||||||||          |||||||||||| ||||| ||| | ||||||| || |||||||| ||||||||||| |    
T  47654468 ttattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaattttagcatgaaaaagtatttcatgaaaaca 47654369  T
Q  330 tgagatttcttgagattgttttt 352  Q
    |||||||||||  ||||||||||    
T  47654368 tgagatttcttaggattgttttt 47654346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 34 - 337
Target Start/End: Complemental strand, 32589277 - 32588963
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaa-tttnn 132  Q
    ||||||||||||||||||||||||||||||| |||||||||| | ||||| || ||       |  ||| ||||||||| || ||| ||| ||| |||      
T  32589277 ttagggggatgtattggattatgattctatgagattttaaaaaacttttttatcatgaaaaagttatgttgtattcaatcaagactcttttcaactttaa 32589178  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
          | || |||||||||||||||||||||| |||||  | || | |||||  | |||||||||||| | ||||||| ||       |||||||||||    
T  32589177 aaaaaatcttctggtattcaatcaagactctttatcattaaacaagaatcttgtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggta 32589078  T
Q  233 ttcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 322  Q
    ||||||||||||||||||| |||  ||||||||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||||||    
T  32589077 ttcaaaatcattcaaattttgaaggattgtttaataaatcggattttgatggattttgtgagattttctagtgaaattttagcataaaaaagtctttcat 32588978  T
Q  323 gaaaagatgagattt 337  Q
    ||||| |||||||||    
T  32588977 gaaaacatgagattt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 327
Target Start/End: Original strand, 45535928 - 45536124
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||| | |||||||||||| || ||||| |||  |||||||||||||| | || |||  ||       |||| ||||||||||||||    
T  45535928 ttgtgttattcaatcaatattctttgtcatttaaacaaagtgttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaat 45536027  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  45536028 cattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 45536124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 45 - 340
Target Start/End: Original strand, 49417972 - 49418277
Alignment:
Q  45 tattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgt 144  Q
    |||||||| ||||||||| | |||||||||||| ||||| || ||       || |||| |||||||| || ||| ||| ||||||       || ||||    
T  49417972 tattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtgatattcaatcaagactctttccaatttagaaaaagtcttgt 49418071  T
Q  145 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 244  Q
    | ||||||||||||| || ||||||||| |||||| |  ||  ||||||||| |||| | || |||| ||       |||| ||||||||||||||||||    
T  49418072 gttattcaatcaagattcattgtcatttaaaaaaaattatgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 49418171  T
Q  245 caaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 334  Q
    |||||||| ||  ||||||||||||||          |||||||||||||||||| || || ||||||| || |||||| ||||||||||||| ||||||    
T  49418172 caaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaattttagcatgaaaaaatctttcatgaaaatatgaga 49418271  T
Q  335 tttctt 340  Q
    ||||||    
T  49418272 tttctt 49418277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 313
Target Start/End: Original strand, 47784371 - 47784542
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||||| ||||  | || ||||||||||||  |||||||||||||| | ||  ||||||       |||||||||||||||||||    
T  47784371 ttgtgatattcaatcaagactttttgcaagttaaaaaaagtcttgtggtattcaatcaagactctttgtcatttaaaaaa-gtcttgtggtattcaaaat 47784469  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaa 313  Q
     ||||||| ||| ||  ||||||||||||||||||||||||| |||||| ||||  ||||||| || ||||||    
T  47784470 tattcaaacttctaaagattgtttaataaattggattttgtgagattttctagttaaattttagcatgaaaaa 47784542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 953700 - 953863
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||           
T  953700 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 953799  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaaga 201  Q
    || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||| |||||||    
T  953800 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaaga 953863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 42290723 - 42290813
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgca 126  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||       |||||||||||||||| || ||||||||||    
T  42290723 agggggatttattggattaagattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaaaactttttgca 42290813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 225 - 340
Target Start/End: Complemental strand, 31572329 - 31572204
Alignment:
Q  225 ttgtggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaag 314  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||          |||||||||||||||||| ||||| |||||||  | |||||||    
T  31572329 ttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaag 31572230  T
Q  315 tctttcatgaaaagatgagatttctt 340  Q
    ||||||||||||  ||||||||||||    
T  31572229 tctttcatgaaatcatgagatttctt 31572204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 37 - 203
Target Start/End: Complemental strand, 19452170 - 19452004
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    ||||| |||||||||| ||||||||| |||||||||||||| ||||| ||  |       |||||||||||||||| || ||| ||| ||||||          
T  19452170 ggggggtgtattggatcatgattctaagggattttaaaagacttttttatcttgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 19452071  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatt 203  Q
     || |||||||||||||||||||||||||   |||| ||||||||||||   |||||||||||||||    
T  19452070 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 19452004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 318
Target Start/End: Original strand, 48524303 - 48524490
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| | |||||||||| |||||| || ||  ||||| |||||| | | || |||| ||       |||||||| ||||||||||    
T  48524303 ttgtgttattcaatcaagattttttgtcatttaaaaaaattcatgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgtgatattcaaaat 48524402  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 318  Q
    ||||||||||| |||  ||||||||||||||          |||||||||||||||||| ||||| |||||||||| |||||||||||    
T  48524403 cattcaaattttgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 289
Target Start/End: Original strand, 29556046 - 29556236
Alignment:
Q  99 ttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatca 198  Q
    |||||||||||||| || ||| ||| ||||||       || ||||| |||||||| |||| || |||| |||| ||||||||||||   ||||||||||    
T  29556046 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaattaagattcattgttatttaaaaaaagtcttgtgttattcaatca 29556145  T
Q  199 agatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggatttt 289  Q
    ||| | || |||| ||        ||| ||| |||||||||||||||||||||||||  ||||||||||||||| |||||||  |||||||    
T  29556146 agactcttaatcacttaaaaaaaatctagtgttattcaaaatcattcaaatttcgaaagattgtttaataaattagattttgatggatttt 29556236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 31622591 - 31622527
Alignment:
Q  225 ttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggatttt 289  Q
    |||| ||||||||||||||||||||||| ||  |||||||||||||| |||||||||| ||||||    
T  31622591 ttgttgtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttgtgagatttt 31622527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 303
Target Start/End: Original strand, 955823 - 955896
Alignment:
Q  230 gtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaatttta 303  Q
    ||||||||||||||||||||||||||   |||||||||||||  |||||||  ||||||| ||||| |||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggattttctagtgaaatttta 955896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 185
Target Start/End: Original strand, 14494091 - 14494237
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||| |||||||||| ||||||||| |||   |||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||         
T  14494091 aggggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaa 14494187  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttg 185  Q
      || ||||| ||||||||||||| |||||||||||| ||||||||||||    
T  14494188 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttg 14494237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 161
Target Start/End: Complemental strand, 38536366 - 38536243
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||||||||||| |||| |||| ||||||||||||||||| |||||| ||||       |||||||||||||||| || ||| ||||  ||||           
T  38536366 ggggatgtattgaattaggattatatgggattttaaaagactttttatttataaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 38536267  T
Q  138 gttttgtggtattcaatcaagact 161  Q
    |||||| |||||||||||||||||    
T  38536266 gttttgaggtattcaatcaagact 38536243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 161
Target Start/End: Complemental strand, 38558584 - 38558461
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||||||||||| |||| |||| ||||||||||||||||| |||||| ||||       |||||||||||||||| || ||| ||||  ||||           
T  38558584 ggggatgtattgaattaggattatatgggattttaaaagactttttatttataaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 38558485  T
Q  138 gttttgtggtattcaatcaagact 161  Q
    |||||| |||||||||||||||||    
T  38558484 gttttgaggtattcaatcaagact 38558461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 51701519 - 51701582
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaaga 201  Q
    |||||||||||||||||||||||| ||||  |||| |||| |||||||  ||||||||||||||    
T  51701519 gttttgtggtattcaatcaagactttttgcaatttaaaaatagtcttgtggtattcaatcaaga 51701582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 953761 - 953823
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatt 203  Q
    |||||||||||||||||||||||||   |||| ||||||||||||   |||||||||||||||    
T  953761 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 953823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 14494151 - 14494213
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatt 203  Q
    |||||||||||||||||||||||||   |||| ||||||||||||   |||||||||||||||    
T  14494151 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 14494213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 29556043 - 29556108
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatt 203  Q
    ||||||||||||||||||||||||||||   |||| ||||||||||||   |||||||| ||||||    
T  29556043 gttttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaattaagatt 29556108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 48524266 - 48524326
Alignment:
Q  146 gtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagattttt 206  Q
    ||||||||||||||||||||   |||| ||||||||||||   ||||||||||||||||||    
T  48524266 gtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattttt 48524326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 51085860 - 51085918
Alignment:
Q  222 gtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttg 280  Q
    |||| |||||||||||||| |||||||||| |||  ||| || ||||||||||||||||    
T  51085860 gtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttg 51085918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 179
Target Start/End: Complemental strand, 25831117 - 25831084
Alignment:
Q  146 gtattcaatcaagactctttgtcattttaaaaaa 179  Q
    ||||||||||||| ||||||||||||||||||||    
T  25831117 gtattcaatcaaggctctttgtcattttaaaaaa 25831084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 28541385 - 28541430
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    |||| |||||||||| ||||||||| | ||||||||||||||||||    
T  28541385 gggggtgtattggatcatgattctaagcgattttaaaagatttttt 28541430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 25831224 - 25831139
Alignment:
Q  39 gggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttg 124  Q
    |||||| ||| ||| ||||||||| || ||||||||||| |||||||||||       |||| || ||||||||||| ||||||||    
T  25831224 gggatgcattcgatcatgattctaaggaattttaaaagactttttaattatgaaaaaatcttttgatattcaattaagactttttg 25831139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 45535884 - 45535944
Alignment:
Q  139 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaa 199  Q
    ||||||| |||||||||||||||||||   |||| ||||||||||||   |||||||||||    
T  45535884 ttttgtgatattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaa 45535944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 34 - 362
Target Start/End: Complemental strand, 36674453 - 36674115
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||       
T  36674453 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 36674354  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||    
T  36674353 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 36674254  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 323  Q
    |||||||||||||||||| |||  ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36674253 tcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 36674154  T
Q  324 aaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  36674153 aaaagatgagatttcttgagattgtttttattttaaaag 36674115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 37 - 362
Target Start/End: Complemental strand, 50762370 - 50762045
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    |||||||||||||||||| |||| ||||||||||||||||| |||||||||||       | |||||||||||||| || ||||||||||| ||          
T  50762370 gggggatgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtattgtggtattcaatcaagactttttgcaacttaaaaaa 50762271  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
     || ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| || ||||||| ||||       |||||||||||||||    
T  50762270 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcatgacttttcataatttaaaaaaagtcttgtggtattca 50762171  T
Q  237 aaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 336  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50762170 aaatcattctaatttcgaatgattgtttgataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 50762071  T
Q  337 tcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||||    
T  50762070 tcttgagattgtttttcttttaaaag 50762045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 36 - 362
Target Start/End: Complemental strand, 44906834 - 44906498
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||| |||||||||| ||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||         
T  44906834 agggggatatattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaa 44906735  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||||    
T  44906734 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 44906635  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaattgg----------attttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    ||||||||||||||||||||  |||||||||||||||||          |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44906634 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaa 44906535  T
Q  326 aagatgagatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||||||||||||||    
T  44906534 aagatgagatttcttgagattgtttttcttttaaaag 44906498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 37 - 362
Target Start/End: Original strand, 11431412 - 11431747
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    |||||||||||||||||| ||||||||  |||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||          
T  11431412 gggggatgtattggattaggattctataagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 11431511  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
     || |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       |||||||||||||||    
T  11431512 agtcttgtggtattcaataaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattca 11431611  T
Q  237 aaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 326  Q
    |||||||| ||||||||||  ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11431612 aaatcatttaaatttcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 11431711  T
Q  327 agatgagatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||| |||||||||    
T  11431712 agatgagatttcttgagattgtttttattttaaaag 11431747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 30 - 362
Target Start/End: Complemental strand, 23753713 - 23753392
Alignment:
Q  30 agtcttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatt 129  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||       |||||||||||||||| || |||||||||||||    
T  23753713 agtcttagggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatt 23753614  T
Q  130 tnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtg 229  Q
    |       || ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||    
T  23753613 taaaaaaagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtg 23753514  T
Q  230 gtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 329  Q
    ||||||||||||||||||||||||||  |||||||||||||||          ||||||||||||||||||||||||||||||||||||||||| |||||    
T  23753513 gtattcaaaatcattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtctttcatg-aaaga 23753425  T
Q  330 tgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||| |||||||||    
T  23753424 tgagatttcttgagattgtttttgttttaaaag 23753392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 140 - 362
Target Start/End: Original strand, 37454850 - 37455072
Alignment:
Q  140 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| ||||||||||||       ||||||||||||||||||    
T  37454850 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaa 37454949  T
Q  240 tcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 339  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37454950 tcattcaaatttcgaatgattgtttaataaattgaattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttct 37455049  T
Q  340 tgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||    
T  37455050 tgagattgtttttcttttaaaag 37455072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 34 - 362
Target Start/End: Original strand, 10660418 - 10660732
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||       
T  10660418 ttagggggatgtattggattaagattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 10660517  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       || |||||||||    
T  10660518 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtattgtggtat 10660617  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 333  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||||              |||||||||||||    
T  10660618 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaaca--------------atgaaaagatgag 10660703  T
Q  334 atttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||| |||||||||    
T  10660704 atttcttgagattgtttttattttaaaag 10660732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 141 - 362
Target Start/End: Complemental strand, 10728857 - 10728636
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||| |||||    
T  10728857 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaat 10728758  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 340  Q
    ||||||||||| |||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10728757 cattcaaatttggaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 10728658  T
Q  341 gagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||    
T  10728657 gagattgtttttcttttaaaag 10728636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 36 - 362
Target Start/End: Complemental strand, 31646605 - 31646271
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||||||||| |||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||         
T  31646605 agggggatgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaa 31646506  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || || |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||        |||||||||||||    
T  31646505 aagtcttatggtattcaatcaagactctttgttattttaaaaaagtcttgacgtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattc 31646406  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||    
T  31646405 aaaatcattcaaatttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 31646306  T
Q  326 aagatgagatttcttgagattgtttttcttttaaaag 362  Q
    |  ||||||||||||||||||||| ||||||||||||    
T  31646305 a--atgagatttcttgagattgttattcttttaaaag 31646271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 141 - 362
Target Start/End: Original strand, 39038030 - 39038251
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||||||||||| ||||||    
T  39038030 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaat 39038129  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 340  Q
    |||||||||||||||  |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39038130 cattcaaatttcgaagaattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatttctt 39038229  T
Q  341 gagattgtttttcttttaaaag 362  Q
    || |||||||||||||||||||    
T  39038230 gaaattgtttttcttttaaaag 39038251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 38 - 357
Target Start/End: Original strand, 40897030 - 40897360
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnn-tcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    ||||||||||||||||| |||||||||||||||||||| | |||||||||||        |||||||||||||||| || | ||||||||| ||          
T  40897030 ggggatgtattggattaggattctatgggattttaaaacactttttaattatgaaaaaaatcttgtggtattcaatcaagattttttgcaacttaaaaaa 40897129  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
     || |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||| |||||||||    
T  40897130 agtcttgtggtattcattcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattca 40897229  T
Q  237 aaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 326  Q
    |||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40897230 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaaa 40897329  T
Q  327 agatgagatttcttgagattgtttttctttt 357  Q
    |||||||||||||||| ||||||||||||||    
T  40897330 agatgagatttcttgatattgtttttctttt 40897360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 36 - 362
Target Start/End: Original strand, 26107146 - 26107482
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||       ||||||  |||||||| || ||||||||||| ||         
T  26107146 agggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtaatattcaatcaagactttttgcaacttaaaaa 26107245  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
        || || ||| |||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||||    
T  26107246 agtcttagtcgtactcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattc 26107345  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    ||||||||||||||||||||  ||||||||||||||          ||||||||||| |||||||||||||||||||||||||||||||| |||||| ||    
T  26107346 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaa 26107445  T
Q  326 aagatgagatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||||||||||||||    
T  26107446 aagatgagatttcttgagattgtttttcttttaaaag 26107482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 34 - 360
Target Start/End: Original strand, 48379041 - 48379376
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||       ||| |||||||||||| || | ||||||||| ||       
T  48379041 ttagggagatgtattggattatgattctataggattttaaaagactttttaattatcaaaaagtctcgtggtattcaatcaaaattttttgcaacttaaa 48379140  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
         | ||||| | |||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||| ||       ||||||||||||    
T  48379141 aaaaatcttgtgat-ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtat 48379239  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 323  Q
    ||||||||||||||||||||||  ||||||||||||||          ||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  48379240 tcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcatg 48379339  T
Q  324 aaaagatgagatttcttgagattgtttttcttttaaa 360  Q
    ||||||| |||||||||||||||||||||||||||||    
T  48379340 aaaagatcagatttcttgagattgtttttcttttaaa 48379376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 141 - 362
Target Start/End: Complemental strand, 34484246 - 34484015
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       || ||||||||||||||||    
T  34484246 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaat 34484147  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34484146 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagat 34484047  T
Q  331 gagatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||| |||||||||    
T  34484046 gagatttcttgagattgtttttgttttaaaag 34484015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 141 - 362
Target Start/End: Original strand, 52810368 - 52810599
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||       |||||||||||||||||||    
T  52810368 ttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 52810467  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    ||||||||||| |||| ||||||||||||||          |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  52810468 cattcaaattttgaatgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagat 52810567  T
Q  331 gagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||||||||||    
T  52810568 gagatttcttgagattgtttttcttttaaaag 52810599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 48 - 362
Target Start/End: Original strand, 54628740 - 54629065
Alignment:
Q  48 tggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggt 147  Q
    ||||||| ||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||       || |||||||    
T  54628740 tggattaggattctatgagattttaaaagactttttaattatgaaaacgtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggt 54628839  T
Q  148 attcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnng-tcttgtggtattcaaaatcattca 246  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||            ||||||||||||||||||||||||    
T  54628840 attcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacaaaaaaaaaaatcttgtggtattcaaaatcattca 54628939  T
Q  247 aatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 336  Q
    |||||| ||  ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  54628940 aatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatt 54629039  T
Q  337 tcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||| ||||    
T  54629040 tcttgagattgtttttcttttgaaag 54629065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 33 - 362
Target Start/End: Complemental strand, 52618289 - 52617956
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    |||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||       ||||||||||||| || || | |||||| || ||      
T  52618289 cttagggggatgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcgatcaagattttttgtaacttaa 52618190  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
         ||  |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||||||||||    
T  52618189 aaaaagtcatgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 52618090  T
Q  233 ttcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 322  Q
    |||||||||||||||||||||||  ||||||||||||||          ||||||||||||||||||||||||||||||||||      |||||||||||    
T  52618089 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaac------aagtctttcat 52617996  T
Q  323 gaaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
     |||||||||||||||||||||||||||||||||||||||    
T  52617995 aaaaagatgagatttcttgagattgtttttcttttaaaag 52617956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 36 - 352
Target Start/End: Complemental strand, 50903564 - 50903235
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||||||| |||       |||||||||||||||| || ||||||||||| ||         
T  50903564 agggggatgtattgaattatgattctatgggattttaaaatactttttaagtatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaa 50903465  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn---gtcttgtggta 232  Q
      || |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||| |||||||          |||||||||||    
T  50903464 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtattcaatcaagactttttatcatttaaaaaaaaaagtcttgtggta 50903365  T
Q  233 ttcaaaatcattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcat 322  Q
    ||||||||||||||||||  |||  |||||||||||||||||||||||          ||||||||||||||||||||||||||||||||| ||||| ||    
T  50903364 ttcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttat 50903265  T
Q  323 gaaaagatgagatttcttgagattgttttt 352  Q
    ||||| ||||||||||||||||||||||||    
T  50903264 gaaaatatgagatttcttgagattgttttt 50903235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 38 - 356
Target Start/End: Complemental strand, 51738044 - 51737717
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||||||||       |||||||||||||||  || |||||| |||| ||           
T  51738044 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtattcaa--aagacttttagcaacttaaaaaaa 51737947  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaa-gtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
    || ||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||| ||||||||| ||       |||||||||||||||    
T  51737946 gtcttgtggtattcaatcaagactctttatcattttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattca 51737847  T
Q  237 aaatcattcaaatttcgaattattgtttaataaattggat----------tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 326  Q
    |||||||||||||||||||  |||||||||||||||||||          ||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  51737846 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtctttcataaaa 51737747  T
Q  327 agatgagatttcttgagattgtttttcttt 356  Q
    |||| ||  |||||||||||||||||||||    
T  51737746 agataagtattcttgagattgtttttcttt 51737717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 141 - 362
Target Start/End: Original strand, 17946278 - 17946509
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||| ||| ||||||||||    
T  17946278 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaat 17946377  T
Q  241 cattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||||||||| ||  ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17946378 cattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 17946477  T
Q  331 gagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||||||||||    
T  17946478 gagatttcttgagattgtttttcttttaaaag 17946509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 140 - 361
Target Start/End: Original strand, 32580166 - 32580396
Alignment:
Q  140 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||       ||||||||||||||||||    
T  32580166 tttgtggtattcgatcaaggctctttgtcattttaaaaaagtcttgaggtattcaat-aagacttttcatcatttaaaaaaagtcttgtggtattcaaaa 32580264  T
Q  240 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 329  Q
    ||||||||||||||||  ||||||||||||||          ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32580265 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 32580364  T
Q  330 tgagatttcttgagattgtttttcttttaaaa 361  Q
    ||||||||||||||||||||||| ||||||||    
T  32580365 tgagatttcttgagattgtttttattttaaaa 32580396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 145 - 362
Target Start/End: Original strand, 18749606 - 18749833
Alignment:
Q  145 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 244  Q
    ||||||||||||| ||| ||  ||| |||||||||||||||| ||||||||| || | ||||||||| ||       |||||||||||||||||||||||    
T  18749606 ggtattcaatcaaaacttttcatcactttaaaaaagtcttgaggtattcaataaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatt 18749705  T
Q  245 caaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 334  Q
    |||||||||||  ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18749706 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 18749805  T
Q  335 tttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||||||    
T  18749806 tttcttgagattgtttttcttttaaaag 18749833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 100 - 362
Target Start/End: Original strand, 44276338 - 44276596
Alignment:
Q  100 tgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaa 199  Q
    |||||||||||||||| ||| |||| |||||       || |||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||    
T  44276338 tgtggtattcaattaagactctttgtaatttaaaaaaagtcttgtggtattcaattaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaa 44276437  T
Q  200 gatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaat 299  Q
    |||||||||||| ||       ||||  |||||||||||||||||||||||  ||    ||||||||||||||||||||||||||||||| ||||| |||    
T  44276438 gatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaattagga----ttgtttaataaattggattttgtgggattttctagtgaaat 44276533  T
Q  300 tttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||| ||||||||||| | ||||||||| ||| |||| |||||||||||||||    
T  44276534 tttaacaagaaaaaatctttcatgaagacatgagattttttgggattatttttcttttaaaag 44276596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 38 - 336
Target Start/End: Original strand, 20832882 - 20833187
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||       | |||||||||||||| || | |||||| || ||           
T  20832882 ggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagttttgtggtattcaatcaagattttttgtaacttaaaa--- 20832978  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || | |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||||||    
T  20832979 gtctcgtggtatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaa 20833078  T
Q  238 aatcattcaaatttcgaattattgtttaataaattggattttgtgggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    |||||||||||||  |||  |||||||||||||||||||||||  ||||||||          ||||||||||||||||||||||||| |||||||||||    
T  20833079 aatcattcaaattcggaaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaa 20833178  T
Q  328 gatgagatt 336  Q
    ||| |||||    
T  20833179 gataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 50 - 361
Target Start/End: Complemental strand, 6035359 - 6035039
Alignment:
Q  50 gattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtat 149  Q
    ||||| |||| ||||||||||||||||| |||||||||||       |||||||||||||||| ||   ||||||||| ||       |||   ||||||    
T  6035359 gattaagattttatgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagtttttttgcaacttaaataaagttca-tggtat 6035261  T
Q  150 tcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaat 249  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||       |||| ||| |||||||||||||||||||    
T  6035260 tcaatcaagagtctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaat 6035161  T
Q  250 ttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 339  Q
    ||||||  | ||||||||||||          |||||||||||||||||| ||||  ||||||| || ||||||||||||||| |||| |||||||||||    
T  6035160 ttcgaagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacatgagatttct 6035061  T
Q  340 tgagattgtttttcttttaaaa 361  Q
    | ||||||||||||||||||||    
T  6035060 taagattgtttttcttttaaaa 6035039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 34 - 352
Target Start/End: Original strand, 20498093 - 20498420
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    |||||||| |||||||||| ||||||||| |||||||||||||| |||||| | ||       |||||||||||||||| || ||| ||| ||||||       
T  20498093 ttaggggggtgtattggatcatgattctaagggattttaaaagacttttta-tcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 20498191  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        |||||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| |||||||    
T  20498192 aaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 20498291  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 323  Q
    ||||||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||    
T  20498292 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 20498391  T
Q  324 aaaagatgagatttcttgagattgttttt 352  Q
    |||| ||||||||||||  ||||||||||    
T  20498392 aaaacatgagatttcttaggattgttttt 20498420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 193 - 362
Target Start/End: Complemental strand, 39842648 - 39842479
Alignment:
Q  193 caatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgta 292  Q
    ||||||||||||||||||| ||       |||| ||| |||||||||||||||||||||||||  ||||||||||||||| |||||||  ||||||||||    
T  39842648 caatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttgta 39842549  T
Q  293 gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39842548 atgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgggattgtttttcttttaaaag 39842479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 45 - 352
Target Start/End: Original strand, 19253721 - 19254038
Alignment:
Q  45 tattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgt 144  Q
    |||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       || ||||    
T  19253721 tattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgt 19253820  T
Q  145 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 244  Q
    | ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||||    
T  19253821 gttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 19253920  T
Q  245 caaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 334  Q
    |||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||    
T  19253921 caaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 19254020  T
Q  335 tttcttgagattgttttt 352  Q
    ||||||  ||||||||||    
T  19254021 tttcttaggattgttttt 19254038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 45 - 352
Target Start/End: Complemental strand, 37820789 - 37820472
Alignment:
Q  45 tattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgt 144  Q
    |||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       || ||||    
T  37820789 tattggataatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgt 37820690  T
Q  145 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 244  Q
    | ||||||||||||| |||||||||||| |||||| |||||  |||||||||||||||| || |||| ||       |||| ||||||||||||||||||    
T  37820689 gttattcaatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 37820590  T
Q  245 caaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 334  Q
    |||||||||||  ||||||||||||||          ||||||||||||||||||  |||| ||||||| || ||||||||||||||| |||| ||||||    
T  37820589 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaaaacatgaga 37820490  T
Q  335 tttcttgagattgttttt 352  Q
    |||||| |||||||||||    
T  37820489 tttcttaagattgttttt 37820472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 38 - 352
Target Start/End: Complemental strand, 996404 - 996081
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| |||||            
T  996404 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatt-aaaaaaa 996306  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||||| ||||| |||||| ||||||||||||  |||||||||||||||| || |||| ||       |||| |||||||||||    
T  996305 gtcttgtgttattcaatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaa 996206  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  996205 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 996106  T
Q  328 gatgagatttcttgagattgttttt 352  Q
     ||||||||||||  ||||||||||    
T  996105 catgagatttcttaggattgttttt 996081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 38 - 352
Target Start/End: Original strand, 6589450 - 6589775
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaaga-ttttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    ||||||||||||||| ||||||||| |||| ||||||||| |||||| || ||       ||||||||||||||||||| ||| |||  |||||          
T  6589450 ggggatgtattggatcatgattctaagggactttaaaagactttttttatcatgaaaaagtcttgtggtattcaattaagactctttctaatttaaaaaa 6589549  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
     || ||||| ||||||||||| | || ||||||||| ||||||||||||  |||||||||||||| | || |||||||       |||| ||||||||||    
T  6589550 agtcttgtgttattcaatcaatattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattca 6589649  T
Q  237 aaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 326  Q
    |||||||||||||||||||  ||| ||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||    
T  6589650 aaatcattcaaatttcgaagaattatttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 6589749  T
Q  327 agatgagatttcttgagattgttttt 352  Q
    | ||||||||||||  ||||||||||    
T  6589750 acatgagatttcttaggattgttttt 6589775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 141 - 327
Target Start/End: Original strand, 6975739 - 6975922
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||| ||||||||||||       |||||||||||||||||||    
T  6975739 ttgtggtattcaatcaagactctttgttattttaaaaa-gtcttgaggtattcaatcaagacttttcatcatttaaaaa--gtcttgtggtattcaaaat 6975835  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    |||||||||||||||  ||| |||| ||||||||| ||||||||||||| ||||  ||||| | || |||| |||||||||||||||    
T  6975836 cattcaaatttcgaagaattatttactaaattggaatttgtgggattttctagtaaaatttgagcatgaaacagtctttcatgaaaa 6975922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 33 - 352
Target Start/End: Complemental strand, 10139469 - 10139141
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    ||||||||| ||||||| || ||||||||| |||||||||||| | ||||| || ||       |||||||||||||||| || ||| ||| ||||||      
T  10139469 cttaggggg-tgtattgaatcatgattctaagggattttaaaatacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaa 10139371  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
         || ||||| ||||||||||||| || || |||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||    
T  10139370 aaaaagtcttgtgttattcaatcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 10139271  T
Q  233 ttcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 322  Q
    |||||||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||    
T  10139270 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 10139171  T
Q  323 gaaaagatgagatttcttgagattgttttt 352  Q
    ||||| ||||||||||||  ||||||||||    
T  10139170 gaaaacatgagatttcttaggattgttttt 10139141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 156 - 362
Target Start/End: Complemental strand, 15493061 - 15492852
Alignment:
Q  156 aagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 255  Q
    ||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| ||       ||||  ||||||||||||||||||||||||  ||    
T  15493061 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaat-gtctcatggtattcaaaatcattcaaatttttaa 15492963  T
Q  256 tta----ttgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttt 351  Q
    |||    || |||||||||||||||||||| |||| || ||||| ||||||||||||||||| |||||||||||   || ||||||||||||||||||||    
T  15492962 ttaagaattatttaataaattggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttcttgagattgtttt 15492863  T
Q  352 tcttttaaaag 362  Q
    | |||||||||    
T  15492862 tattttaaaag 15492852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 43 - 352
Target Start/End: Complemental strand, 3206510 - 3206200
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       || ||    
T  3206510 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtctt 3206411  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||||||||||||||||| |||||         |||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||    
T  3206410 gtggtattcaatcaagattcttt---------aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 3206320  T
Q  243 ttcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 332  Q
    |||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| ||||    
T  3206319 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatga 3206220  T
Q  333 gatttcttgagattgttttt 352  Q
    ||||||||  ||||||||||    
T  3206219 gatttcttatgattgttttt 3206200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 32 - 211
Target Start/End: Original strand, 18749451 - 18749630
Alignment:
Q  32 tcttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttn 131  Q
    |||||||| | |||||||||||| |||||||| | ||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||     
T  18749451 tcttagggcggtgtattggattaggattctatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaactta 18749550  T
Q  132 nnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatca 211  Q
          || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||    
T  18749551 aaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatca 18749630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 29 - 337
Target Start/End: Original strand, 35337612 - 35337930
Alignment:
Q  29 tagtcttagggggatgtattggatt-atgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaa 127  Q
    |||||||| |||| |||||| || | ||||||||| |||||||||||||| ||||| |||||       |||||||||||||||| || ||| ||| |||    
T  35337612 tagtcttaagggggtgtatttgaatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaa 35337711  T
Q  128 tttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttg 227  Q
    |||       || ||||| ||||||||||||| || ||||||||||||||||||||||  |||||||||||||| | || |||| ||       |||| |    
T  35337712 tttaaaaaaagtcttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag 35337811  T
Q  228 tggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 317  Q
    ||||||||||||  ||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| |    
T  35337812 tggtattcaaaaaaattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt-t 35337910  T
Q  318 ttcatgaaaagatgagattt 337  Q
    |||||||||| |||||||||    
T  35337911 ttcatgaaaacatgagattt 35337930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 97 - 352
Target Start/End: Complemental strand, 44762297 - 44762032
Alignment:
Q  97 tcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaat 196  Q
    |||||||||||||||| || ||| ||| ||||||       || ||||| ||||||||||||| |||||||||||| ||||||||| || ||||||||||    
T  44762297 tcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtagtattcaat 44762198  T
Q  197 caagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggat 286  Q
    ||||| | || |||| ||       |||| |||||||| ||||| |||||| |||||||  ||||||||||||||          |||||||||||||||    
T  44762197 caagactcttaatcacttaaaaaaagtctagtggtatttaaaattattcaagtttcgaaggattgtttaataaatcagattttgatggattttgtgggat 44762098  T
Q  287 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 352  Q
    ||| ||||| ||||||| || |||||||||||| ||||||| |||||||||||| |||||||||||    
T  44762097 tttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaagattgttttt 44762032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 141 - 352
Target Start/End: Complemental strand, 3999861 - 3999640
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||        ||| ||||||||||||||    
T  3999861 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaat 3999762  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| |||||||  | ||||||||||||||| |||| ||    
T  3999761 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaacat 3999662  T
Q  331 gagatttcttgagattgttttt 352  Q
    ||||||||||  ||||||||||    
T  3999661 gagatttcttaggattgttttt 3999640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 45862983 - 45863060
Alignment:
Q  283 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaa 45863060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 38 - 192
Target Start/End: Complemental strand, 27240562 - 27240408
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||           
T  27240562 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 27240463  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtatt 192  Q
    || ||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  27240462 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtatt 27240408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 141 - 349
Target Start/End: Complemental strand, 33808015 - 33807796
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggtattcaaaa 239  Q
    ||||| |||||||| |||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||        |||| |||||||||||||    
T  33808015 ttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaa 33807916  T
Q  240 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 329  Q
    ||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |    
T  33807915 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 33807816  T
Q  330 tgagatttcttgagattgtt 349  Q
    |||||||||||  |||||||    
T  33807815 tgagatttcttaggattgtt 33807796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 222 - 352
Target Start/End: Original strand, 27899415 - 27899545
Alignment:
Q  222 gtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 321  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||||  |||||||| ||||||| ||||| ||||||| || ||||||||||||||    
T  27899415 gtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgtaggattttctagtgaaattttagcatgaaaaagtctttca 27899514  T
Q  322 tgaaaagatgagatttcttgagattgttttt 352  Q
    |||||| |||| |||||||  ||||||||||    
T  27899515 tgaaaacatgaaatttcttatgattgttttt 27899545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 141 - 352
Target Start/End: Original strand, 40246834 - 40247055
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| |||||||||||| |||||||| |||  |||||||||||||| | || |||| ||       |||| ||||||||||||||    
T  40246834 ttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaaaat 40246933  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    ||||||||||| |||  ||||||||||||||          |||||||||||||||||| ||||| ||||||  || |||||||||||||||||||| ||    
T  40246934 cattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacat 40247033  T
Q  331 gagatttcttgagattgttttt 352  Q
    |||||| |||  ||||||||||    
T  40247034 gagattccttatgattgttttt 40247055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 43 - 352
Target Start/End: Original strand, 54625484 - 54625803
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| | ||||||| |||||||||| || ||       | |||| ||||||||| || ||| ||| ||||||       || ||    
T  54625484 tgtattggatcatgattctaagagattttagaagatttttttatcatgaaatttttttgtagtattcaatcaagactctttccaatttaaaaaaagtctt 54625583  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||| | || ||||||||| |||||| |||||  |||||||||||||| | || |||| ||       |||| |||||||||||||| |    
T  54625584 gtgttattcaatcaatattcgttgtcatttaaaaaaaatcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatta 54625683  T
Q  243 ttcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 332  Q
    |||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||||    
T  54625684 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacatga 54625783  T
Q  333 gatttcttgagattgttttt 352  Q
    |||||||| |||||| ||||    
T  54625784 gatttcttaagattgatttt 54625803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 35 - 251
Target Start/End: Original strand, 12103516 - 12103729
Alignment:
Q  35 tagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnn 134  Q
    ||||||||||||||||||||  |||||| |  ||||||||||| |||||||||||       |||||| ||||||||| || ||| |||| |||||        
T  12103516 tagggggatgtattggattagaattctaag--attttaaaagactttttaattatgaaatagtcttgttgtattcaatcaatactctttgtaatttaaaa 12103613  T
Q  135 nnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtatt 234  Q
       || | |||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||       ||||  |||||||    
T  12103614 aa-gtctcgtggtattcaattaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtatt 12103712  T
Q  235 caaaatcattcaaattt 251  Q
    |||||||||||||||||    
T  12103713 caaaatcattcaaattt 12103729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 175 - 280
Target Start/End: Complemental strand, 539586 - 539481
Alignment:
Q  175 aaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattgg 274  Q
    |||||||||||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||  ||| |||||||||||||    
T  539586 aaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 539487  T
Q  275 attttg 280  Q
    ||||||    
T  539486 attttg 539481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 45 - 352
Target Start/End: Original strand, 25418260 - 25418577
Alignment:
Q  45 tattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgt 144  Q
    |||||||| ||||||||| | |||||||||| ||||||| || ||       | |||||||||||||| || ||| ||| || |||       || ||||    
T  25418260 tattggatcatgattctaagagattttaaaaaatttttttatcatgaaaattttttgtggtattcaatcaaaactctttccattttaaaaaaagtcttgt 25418359  T
Q  145 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 244  Q
    | ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| |||| |||| ||        ||| | ||||||||||||||||    
T  25418360 gttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaaaatcatt 25418459  T
Q  245 caaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 334  Q
    |||||||  ||  ||||||||||||||          |||||||||||||||||| ||||| ||||||  || |||||||| ||||||||||| ||||||    
T  25418460 caaatttgaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaaaacatgaga 25418559  T
Q  335 tttcttgagattgttttt 352  Q
    || |||  ||||||||||    
T  25418560 ttccttaggattgttttt 25418577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 141 - 352
Target Start/End: Complemental strand, 29449074 - 29448853
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| || |||||||||  |||||||||||   ||||||||||||| | |  |||| ||       |||| ||||||||||||||    
T  29449074 ttgtgttattcaatcaagattccttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtattcaaaat 29448975  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||  ||||||| ||  ||||||||||||||||||| ||    
T  29448974 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaaaacat 29448875  T
Q  331 gagatttcttgagattgttttt 352  Q
    ||||||||||  ||||||||||    
T  29448874 gagatttcttaggattgttttt 29448853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 146 - 340
Target Start/End: Complemental strand, 33996752 - 33996548
Alignment:
Q  146 gtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattc 245  Q
    |||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||        ||  |||||||||||||||||||    
T  33996752 gtattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattc 33996653  T
Q  246 aaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 335  Q
    ||||||||||  ||||||||||||||          ||||||||| |||||||| ||||| ||||||| || |||||||||||| || |||| |||||||    
T  33996652 aaatttcgaaggattgtttaataaatcagattttgatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagat 33996553  T
Q  336 ttctt 340  Q
    |||||    
T  33996552 ttctt 33996548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 149 - 352
Target Start/End: Complemental strand, 53929336 - 53929123
Alignment:
Q  149 ttcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaa 248  Q
    ||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| |||||||||||||||||| |||    
T  53929336 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaa 53929237  T
Q  249 tttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 338  Q
    | |||||  ||||||||||||||          |||||||||| ||||||| ||||| ||||||| || |||||| ||||| ||||||| |||||||||     
T  53929236 tatcgaacgattgtttaataaataagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagatttt 53929137  T
Q  339 ttgagattgttttt 352  Q
    ||  ||||||||||    
T  53929136 ttaggattgttttt 53929123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 291
Target Start/End: Original strand, 29029996 - 29030145
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||||||||||||||||||    
T  29029996 ttgtgttattcaattaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaa-gtcttgtggtattcaaaat 29030094  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 291  Q
    ||||||||||| |||  ||||||||||||||  |||||||  |||||||||    
T  29030095 cattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 29030145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 6131308 - 6131228
Alignment:
Q  272 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 352  Q
    |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  6131308 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 6131228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 228 - 352
Target Start/End: Original strand, 5825139 - 5825273
Alignment:
Q  228 tggtattcaaaatcattcaaatttcgaattattgtttaataaattggatt----------ttgtgggattttgtagtgtaattttaacaagaaaaagtct 317  Q
    |||||||||||||||||||||||| |||  ||||||||||||||||||||          |||||||||||| ||||| |||| || || ||||||| ||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggct 5825238  T
Q  318 ttcatgaaaagatgagatttcttgagattgttttt 352  Q
    |||||||||| ||||||||||||  ||||||||||    
T  5825239 ttcatgaaaacatgagatttcttatgattgttttt 5825273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 227 - 352
Target Start/End: Original strand, 52080003 - 52080122
Alignment:
Q  227 gtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 326  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||  |||||||||||||||| || || ||||||| || ||||||||      |||||    
T  52080003 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgtgggattttctaatgaaattttagcatgaaaaagt------tgaaa 52080096  T
Q  327 agatgagatttcttgagattgttttt 352  Q
    | ||||||||||||  ||||||||||    
T  52080097 acatgagatttcttaggattgttttt 52080122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 195
Target Start/End: Original strand, 52810305 - 52810464
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||| ||||||||||||| |||||||||||||||||||||| ||||||| |||       | |||||||||||||| || ||| ||||  ||||         
T  52810305 aggggaatgtattggattaggattctatgggattttaaaagactttttaactatgaaaaagtgttgtggtattcaatcaagactctttgtcattttaaaa 52810404  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaa 195  Q
      |||||| ||||||||||||||||| ||  |||||| ||||||||||||  ||||||||    
T  52810405 aagttttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 52810464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 289
Target Start/End: Complemental strand, 1440169 - 1440020
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaa-gtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    ||||| ||||||||||||| |||||||||||| |||||| || |||  |||||||||||||| | || |||| ||       |||| |||||||||||||    
T  1440169 ttgtgttattcaatcaagattctttgtcatttaaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaa 1440070  T
Q  240 tcattcaaatttcgaattattgtttaataaattggattttgtgggatttt 289  Q
    ||||||||||||| ||  ||||||||||||||  |||||||  |||||||    
T  1440069 tcattcaaatttccaaggattgtttaataaatcagattttgatggatttt 1440020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 38 - 127
Target Start/End: Complemental strand, 39842748 - 39842659
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaa 127  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||       | |||||||||||||| || |||||||||||    
T  39842748 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaa 39842659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 43 - 280
Target Start/End: Original strand, 52114422 - 52114658
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||| ||||| ||||||||| || ||||||||||||||||| || ||       |||||||||||||||| |||  ||||  ||||||        | ||    
T  52114422 tgtactggatcatgattctaaggaattttaaaagatttttttatcatgataaagtcttgtggtattcaatcaactatttt--caatttaaaaaaaatctt 52114519  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatca-tttnnnnnnngtcttgtggtattcaaaatc 241  Q
    ||| ||||||| ||||| |||||||||||| ||||||||||||  |||||||||||||| |||| |||| ||        |||| ||||||||||||||     
T  52114520 gtgttattcaaccaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaata 52114619  T
Q  242 attcaaatttcgaattattgtttaataaattggattttg 280  Q
    |||||||||||| |  ||||||||||||||  |||||||    
T  52114620 attcaaatttcgcaggattgtttaataaatcagattttg 52114658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 332
Target Start/End: Complemental strand, 51699689 - 51699495
Alignment:
Q  147 tattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 246  Q
    ||||||||||||| |||||||||||| |||||| |||||  |||||||||||||| | || |||| ||        ||| ||||||||||||||||||||    
T  51699689 tattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggtattcaaaatcattca 51699591  T
Q  247 aatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 332  Q
    |||||||||  |||| |||||||||          || ||||||||||||||| ||||| ||||||| || |||||| |||||| |||||| ||||    
T  51699590 aatttcgaaggattggttaataaataagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaaatctttcgtgaaaacatga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 23535946 - 23535866
Alignment:
Q  222 gtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaatttt 302  Q
    |||||||||||||||||||||||||||||| |||  || ||||||| |||| ||||| |||||||||| ||||| ||||||    
T  23535946 gtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagatttagtgggattttctagtgaaatttt 23535866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 289
Target Start/End: Original strand, 55235176 - 55235322
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||| || |||||||| |||| |||||||||||||||||  || |||||||||||| | | ||||||| ||       ||||  || ||||||||||    
T  55235176 ttgtggtctttaatcaagattctt-gtcattttaaaaaagtcacgaggtattcaatcaaaactcttcatcaattaaaaaa-gtctcatgatattcaaaat 55235273  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggatttt 289  Q
    |||||||||||||||  ||||||||||||||||| |||||  |||||||    
T  55235274 cattcaaatttcgaaagattgtttaataaattggtttttgatggatttt 55235322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 51699739 - 51699675
Alignment:
Q  139 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatt 203  Q
    |||||||||||||||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  51699739 ttttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtattattcaatcaagatt 51699675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 6131390 - 6131327
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaaga 201  Q
    |||||||| |||||||||||||||| ||||||||| |||||||| |||  ||||||||||||||    
T  6131390 gttttgtgttattcaatcaagactcattgtcatttaaaaaaagttttgtggtattcaatcaaga 6131327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 10728920 - 10728844
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaat 112  Q
    |||||||||||||||||||  ||||||||| ||||||||||| |||||||||||       ||||||||||||||||    
T  10728920 agggggatgtattggattagcattctatggaattttaaaagactttttaattatgaaaaagtcttgtggtattcaat 10728844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 15494050 - 15493999
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    |||||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  15494050 ggggatgtattggattataattctaagggattttaaaagactttttaattat 15493999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 17946214 - 17946291
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaat 112  Q
    ||||||||||||||||||||| |||||||| ||| ||||||||| |||||||||||       ||||||||||||||||    
T  17946214 ttagggggatgtattggattaggattctatagga-tttaaaagactttttaattatgaaaaagtcttgtggtattcaat 17946291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 144 - 183
Target Start/End: Original strand, 27899379 - 27899418
Alignment:
Q  144 tggtattcaatcaagactctttgtcattttaaaaaagtct 183  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  27899379 tggtattcaatcaagactctttgtcatttaaaaaaagtct 27899418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 539699 - 539649
Alignment:
Q  39 gggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    |||||||||||||||| | ||||| | ||||||||||||||||||||||||    
T  539699 gggatgtattggattagggttctaagagattttaaaagattttttaattat 539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 1440210 - 1440149
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatt 203  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||||   |||||||||||||||    
T  1440210 ttgtggtattcaatcaagactattt-tcaatttaaaaaagtcttgtgttattcaatcaagatt 1440149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 312
Target Start/End: Original strand, 22057751 - 22057933
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagt-cttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    ||||| ||||||||||||| |||||||||||| ||||||   ||||  |||||| ||||||| | || |||| ||        ||| |||||||| ||||    
T  22057751 ttgtgttattcaatcaagattctttgtcatttaaaaaaaaaacttgtggtattccatcaagactcttgatcacttaaaaaaaatctagtggtatttaaaa 22057850  T
Q  240 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaa 312  Q
    |||||||||||||||   ||||||||||||||          |||||||||||||||||| ||||| |||||||||| |||||    
T  22057851 tcattcaaatttcgatggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 12734163 - 12734114
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    |||||||| |||||||||| ||||||||| |||||||||||||| |||||    
T  12734163 ttaggggggtgtattggatcatgattctaagggattttaaaagacttttt 12734114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 6131473 - 6131410
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagat 202  Q
    ||||||||||||||||||||||||||||  || || ||||||||||||   ||||||||||||||    
T  6131473 gttttgtggtattcaatcaagactcttt-ccaattgaaaaaagtcttgtgttattcaatcaagat 6131410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 27240501 - 27240441
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaaga 201  Q
    ||||||||||||||||||||| ||||  | || ||||||||||||  ||||||||||||||    
T  27240501 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaaga 27240441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 349
Target Start/End: Complemental strand, 33807730 - 33807678
Alignment:
Q  297 aattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 349  Q
    ||||||| || |||||||||||||||||||| ||||||||||||  |||||||    
T  33807730 aattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtt 33807678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 50901261 - 50901209
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    ||||||||||||||||||  ||| || |||||||||||||| |||||||||||    
T  50901261 gggggatgtattggattaaaattttaagggattttaaaagactttttaattat 50901209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 352
Target Start/End: Complemental strand, 1439967 - 1439889
Alignment:
Q  274 gattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 352  Q
    |||||||||||||||| ||||  ||||||   | |||||||||||||| ||||| ||||||||| ||  ||||||||||    
T  1439967 gattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagattttttaggattgttttt 1439889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 29029895 - 29029937
Alignment:
Q  40 ggatgtattggattatgattctatgggattttaaaagattttt 82  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||    
T  29029895 ggatgtattggatcatgattctaagggattttaaaagactttt 29029937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 40246792 - 40246854
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatt 203  Q
    ||||||||||||||||||||||||| |  ||| |||||| |||||   |||||||||||||||    
T  40246792 ttgtggtattcaatcaagactctttctggtttaaaaaaaatcttgtgttattcaatcaagatt 40246854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 1440129 - 1440084
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtct 183  Q
    |||||||||||||||||||||||||||  ||| || ||||||||||    
T  1440129 gttttgtggtattcaatcaagactcttaatcacttaaaaaaagtct 1440084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 12103733 - 12103774
Alignment:
Q  284 gattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    |||||| ||||| |||||||||||||| ||||||||||||||    
T  12103733 gattttctagtgaaattttaacaagaataagtctttcatgaa 12103774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 16010746 - 16010795
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    |||||||| |||||||||| || |||||| |||||||||||||| |||||    
T  16010746 ttaggggggtgtattggatcataattctaagggattttaaaagacttttt 16010795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 291
Target Start/End: Original strand, 22057655 - 22057902
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaaga-ttttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttt 141  Q
    |||||||||| ||||||||| |||||||||||||| |||||| || ||       | ||||||||||||||   |  | ||| ||||||       || |    
T  22057655 tgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtattgtggtattcaat---cgttctttccaatttaaaaaaagtct 22057751  T
Q  142 tgtggtattcaatcaagactctttgtcattt-taaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||| ||||||||||||| ||||||||||||  ||||||  ||||  |||||| ||||||| | || |||| ||        ||| |||||||| |||||    
T  22057752 tgtgttattcaatcaagattctttgtcatttaaaaaaaaaacttgtggtattccatcaagactcttgatcacttaaaaaaaatctagtggtatttaaaat 22057851  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 291  Q
    ||||||||||||||   ||||||||||||||  |||||||  |||||||||    
T  22057852 cattcaaatttcgatggattgtttaataaatcagattttgatggattttgt 22057902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 32580063 - 32580100
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaa 75  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  32580063 ggggatgtattggattaggattctatgagattttaaaa 32580100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 38772325 - 38772370
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttga 186  Q
    ||||||||||||||||||| ||||||| | || |||||||||||||    
T  38772325 ttgtggtattcaatcaagattctttgtaacttaaaaaaagtcttga 38772370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 2024155 - 2024191
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaa 177  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  2024155 ttgtggtattcaatcaagactatttgtcatttaaaaa 2024191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 39037982 - 39038031
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaatt 87  Q
    ||||||||||||| |||||  |||||  ||||||||||||||||||||||||    
T  39037982 agggggatgtattagattagaattct--gggattttaaaagattttttaatt 39038031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 53929378 - 53929339
Alignment:
Q  139 ttttgtggtattcaatcaagactctttgtcattttaaaaaa 179  Q
    ||||||||||||||||||||||||||| ||| |||||||||    
T  53929378 ttttgtggtattcaatcaagactcttt-tcaatttaaaaaa 53929339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 196; Significance: 1e-106; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 44 - 362
Target Start/End: Complemental strand, 28740598 - 28740280
Alignment:
Q  44 gtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttg 143  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||       || |||    
T  28740598 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttg 28740499  T
Q  144 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcat 243  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||||||||||||    
T  28740498 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcat 28740399  T
Q  244 tcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 343  Q
    ||||||||||||  |||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28740398 tcaaatttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcataaaaagatgagatttcttgag 28740299  T
Q  344 attgtttttcttttaaaag 362  Q
    |||||||||||||||||||    
T  28740298 attgtttttcttttaaaag 28740280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 38 - 361
Target Start/End: Complemental strand, 13833743 - 13833420
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| ||||||||| ||||||||||||| ||||||||||       | |||||||||||||| || ||||||||||| ||           
T  13833743 ggggatgtattggattaggattctatgagattttaaaagatattttaattatgaaaaagtattgtggtattcaatcaagactttttgcaacttaaaaaaa 13833644  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||||  ||||||||||||| ||||||||| ||       ||||| ||||||||||    
T  13833643 gtcttgtggtattcaatcaagactttttatcattttaaaaaagtcttgatatattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaa 13833544  T
Q  238 aatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 337  Q
    |||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13833543 aatcattcaaattttgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgacaagatgagattt 13833444  T
Q  338 cttgagattgtttttcttttaaaa 361  Q
    |||||||||| |||||||||||||    
T  13833443 cttgagattgcttttcttttaaaa 13833420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 38 - 362
Target Start/End: Original strand, 28844444 - 28844778
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||           
T  28844444 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 28844543  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||||||    
T  28844544 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 28844643  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||||||||||  ||||||||||||||          |||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  28844644 aatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaa 28844743  T
Q  328 gatgagatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||||||||||||    
T  28844744 gatgagatttcttgagattgtttttcttttaaaag 28844778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 36 - 362
Target Start/End: Original strand, 3463558 - 3463885
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||         
T  3463558 agggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagactttttgcaatttaaaaa 3463657  T
Q  136 nngttttgtggtattcaatcaaga-ctctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtatt 234  Q
      || || |  ||||||||||||| ||||||||||||||||||||||||||| || ||||||||||| ||||||||||||       |||||||||||||    
T  3463658 aagtcttataatattcaatcaagaactctttgtcattttaaaaaagtcttgaggtgttcaatcaagacttttcatcatttaaaaaaagtcttgtggtatt 3463757  T
Q  235 caaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 334  Q
     |||||||||||| |||| ||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3463758 taaaatcattcaattttcaaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaatatgaga 3463857  T
Q  335 tttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||| |||||||||    
T  3463858 tttcttgagattgtttttgttttaaaag 3463885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 36 - 362
Target Start/End: Original strand, 33135510 - 33135845
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| |||||||| ||||||||||||| |||||||||||       |||| ||||||||||| || ||||||||||||||         
T  33135510 agggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaa 33135609  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||| |||||||||    
T  33135610 aagtattgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattc 33135709  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    ||||||||||||||||||||  ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33135710 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aa 33135808  T
Q  326 aagatgagatttcttgagattgtttttcttttaaaag 362  Q
    || ||||||||||||||||||||||||||||||||||    
T  33135809 aaaatgagatttcttgagattgtttttcttttaaaag 33135845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 34 - 320
Target Start/End: Original strand, 7026488 - 7026775
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnn-tcttgtggtattcaattaacactttttgcaatttnn 132  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||        |||||||||||||||| || ||||||||||||||      
T  7026488 ttagggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaagtcttgtggtattcaatcaagactttttgcaatttaa 7026587  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
         || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       |||||||||||    
T  7026588 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 7026687  T
Q  233 ttcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 320  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  7026688 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttc 7026775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 36 - 362
Target Start/End: Original strand, 26788671 - 26789006
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||         
T  26788671 agggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaa 26788770  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatt--tnnnnnnngtcttgtggtat 233  Q
      || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||          ||||||||||||    
T  26788771 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattcaaaaaaaaagtcttgtggtat 26788870  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 323  Q
    |||||||||||||||||| |||  ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  26788871 tcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat- 26788969  T
Q  324 aaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
      ||||||||||||||||||||||||||| |||||||||    
T  26788970 --aagatgagatttcttgagattgtttttattttaaaag 26789006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 36 - 362
Target Start/End: Original strand, 10657293 - 10657629
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||  ||||||||||||||||||| || |||||| ||||       || ||||||||||||| ||  ||||||| || ||         
T  10657293 agggggatgtattggatttggattctatgggattttaaatgactttttagttatgaaaaagtcgtgtggtattcaatcaaggctttttgaaacttaaaaa 10657392  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || |||||||||||||||||||  |||||||||||||||||||| |||| |||||||||||||| ||||||||| ||       ||||||||||||||    
T  10657393 aagtcttgtggtattcaatcaagatcctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 10657492  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    ||||||||||||||||||||| ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10657493 aaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaa 10657592  T
Q  326 aagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||| |||||||||||||||||||||||||||||    
T  10657593 aagatgaaatttcttgagattgtttttcttttaaaag 10657629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 34 - 362
Target Start/End: Complemental strand, 215550 - 215225
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||       
T  215550 ttagggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaa 215451  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||| ||||||||| ||       |||| |||||||    
T  215450 aaaagtcttgtggtattcaatcaagactctttgtcaattttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtat 215351  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 333  Q
    ||||||||||||||| ||| ||  ||||||| ||   ||  | |   | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  215350 tcaaaatcattcaaacttcaaaggattgtttgattgttt--aataaattggattttgtagtgtaattttaaca-gaaaaagtctttcatgaaaagatgag 215254  T
Q  334 atttcttgagattgtttttcttttaaaag 362  Q
    ||||| |||||||||||||||||||||||    
T  215253 atttcatgagattgtttttcttttaaaag 215225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 25288152 - 25288382
Alignment:
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatc 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| ||        |||||||||||||||||||    
T  25288152 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatc 25288251  T
Q  242 attcaaatttcgaattattgtttaataaattggattt----------tgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 331  Q
    ||||||||||||||  |||||||||||||||||||||          ||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  25288252 attcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatg 25288351  T
Q  332 agatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||||||||    
T  25288352 agatttcttgagattgtttttcttttaaaag 25288382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 39 - 362
Target Start/End: Complemental strand, 10125612 - 10125287
Alignment:
Q  39 gggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnng 138  Q
    |||||||||| |||||  |||||| | ||||||||||||||||||||||||       ||| |||  ||||||| || ||| ||||||||||       |    
T  10125612 gggatgtattcgattagaattctaagagattttaaaagattttttaattatgaaaaagtctcgtgacattcaatcaagactctttgcaatttaaaaaaag 10125513  T
Q  139 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtctt--gaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||| | ||||||||| ||       ||||  || ||||||    
T  10125512 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttttgagatattcaatcaaaacttttcatcacttaaaaaaagtctcatgatattca 10125413  T
Q  237 aaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 336  Q
    |||||||||||||||| ||  |||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||| |||| | ||||||    
T  10125412 aaatcattcaaatttcaaaggattgtttaataaattgaattttgtgggattttttagtgaaattttaacaagaaaaagtctttcataaaaacacgagatt 10125313  T
Q  337 tcttgagattgtttttcttttaaaag 362  Q
    |||| |||||||||||||||||||||    
T  10125312 tcttaagattgtttttcttttaaaag 10125287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 38 - 361
Target Start/End: Original strand, 3574736 - 3575049
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||||||| ||||||||  ||||||||| ||||||||||| |||||||||||       | |||||||||||||| || ||||||||||| ||           
T  3574736 ggggatgtgttggattagaattctatggaattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaa 3574835  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||||||| |||||||    
T  3574836 gttttgtggtattcaatcaagactaattgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaa 3574935  T
Q  238 aatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 337  Q
    ||||||||||||||||||  |||||||||||||||          ||||||||||||||||||||||||| ||||| | |||| | ||||| ||||||||    
T  3574936 aatcattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaaaaaaaaatatttcgtaaaaagttgagattt 3575025  T
Q  338 cttgagattgtttttcttttaaaa 361  Q
    ||||||||||||||||||||||||    
T  3575026 cttgagattgtttttcttttaaaa 3575049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 147 - 362
Target Start/End: Original strand, 18177265 - 18177490
Alignment:
Q  147 tattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 246  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       || ||||||||||||||||||||||    
T  18177265 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattca 18177364  T
Q  247 aatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 336  Q
    |||||||||  |||||||||| |||          |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  18177365 aatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgagatt 18177464  T
Q  337 tcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||| |||||||||    
T  18177465 tcttgagattgtttttattttaaaag 18177490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 142 - 362
Target Start/End: Complemental strand, 6224765 - 6224554
Alignment:
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatca-tttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||       |||||||||||||||||||    
T  6224765 tgtggtatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactttaaaaaaagtcttgtggtattcaaaat 6224666  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 340  Q
     ||||||||||||||  ||| ||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6224665 tattcaaatttcgaaggattatttaataaattggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6224576  T
Q  341 gagattgtttttcttttaaaag 362  Q
    || |||||||||||||||||||    
T  6224575 gatattgtttttcttttaaaag 6224554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 43 - 352
Target Start/End: Original strand, 16269585 - 16269904
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||| ||||| |||||       |||||||||||||||| || ||| ||| ||||||       || ||    
T  16269585 tgtattggatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 16269684  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||    
T  16269685 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 16269784  T
Q  243 ttcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 332  Q
    |||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  16269785 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacatga 16269884  T
Q  333 gatttcttgagattgttttt 352  Q
    ||||||||  ||||||||||    
T  16269885 gatttcttaggattgttttt 16269904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 141 - 361
Target Start/End: Original strand, 378929 - 379149
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||| ||||  | || ||||||||||||  |||||||||||| | ||||  ||||||       || |  |||||||||||||    
T  378929 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaaaactttttctcatttaaaaaaagtttcatggtattcaaaat 379028  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 340  Q
    ||||||||||| |||  |||||||||||||||||||||||   |||||||||||||||||||||||||||||| || |||||||||||||||||||| ||    
T  379029 cattcaaattttgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaagaaaaaatcgttcatgaaaagatgagatttatt 379128  T
Q  341 gagattgtttttcttttaaaa 361  Q
    |||||||||||||||||||||    
T  379129 gagattgtttttcttttaaaa 379149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 36 - 352
Target Start/End: Original strand, 24776242 - 24776568
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| |||  |||||         
T  24776242 aggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaa 24776341  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| |||||||||    
T  24776342 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 24776441  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    ||||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  24776442 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 24776541  T
Q  326 aagatgagatttcttgagattgttttt 352  Q
    || ||||||||||||  ||||||||||    
T  24776542 aacatgagatttcttaggattgttttt 24776568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 43 - 352
Target Start/End: Complemental strand, 22552079 - 22551760
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || | ||||| ||||||       || ||    
T  22552079 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattttttccaatttaaaaaaagtctt 22551980  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| |||| |||| ||       |||| |||||||||||||| |    
T  22551979 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatta 22551880  T
Q  243 ttcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 332  Q
    |||||||||||||| |||||||| |||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||||    
T  22551879 ttcaaatttcgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacatga 22551780  T
Q  333 gatttcttgagattgttttt 352  Q
    ||||||||  ||||||||||    
T  22551779 gatttcttatgattgttttt 22551760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 38 - 352
Target Start/End: Complemental strand, 31170945 - 31170621
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       ||||||| |||||||| || ||| ||| ||||||           
T  31170945 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaa 31170846  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| |||||||||||    
T  31170845 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 31170746  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||||||| ||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  31170745 aatcattcaaatttccaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 31170646  T
Q  328 gatgagatttcttgagattgttttt 352  Q
     ||||||||||||  ||||||||||    
T  31170645 catgagatttcttaggattgttttt 31170621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 38 - 352
Target Start/End: Original strand, 12407269 - 12407593
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| | |||||||||||| ||||| || ||       |||||||||||||||| || | | ||| ||||||           
T  12407269 gggggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattcttttcaattttaaaaaa 12407368  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||| ||| | || |||| ||       |||| |||||||||||    
T  12407369 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaa 12407468  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    |||||||||||||| |||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  12407469 aatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaa 12407568  T
Q  328 gatgagatttcttgagattgttttt 352  Q
     |||||||||||| |||||||||||    
T  12407569 catgagatttcttaagattgttttt 12407593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 43 - 352
Target Start/End: Original strand, 35316956 - 35317275
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    ||||||| || ||||||||| |||||||||||| | ||||| || ||       |||||||||||||||| || ||| ||| ||||||       |||||    
T  35316956 tgtattgaatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtttt 35317055  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| |||||||||||| | ||||||||||||| | || |||| ||       |||| ||||||||||||||||    
T  35317056 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 35317155  T
Q  243 ttcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 332  Q
    |||||||||||||  ||||||||||||||          |||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| || |    
T  35317156 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataa 35317255  T
Q  333 gatttcttgagattgttttt 352  Q
    |||||||| | |||||||||    
T  35317256 gatttcttaacattgttttt 35317275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 97 - 352
Target Start/End: Original strand, 20605184 - 20605449
Alignment:
Q  97 tcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaat 196  Q
    |||||||||||||||| || ||| ||| ||||||       || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||    
T  20605184 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaat 20605283  T
Q  197 caagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggat 286  Q
    ||||| | || |||| ||       |||| |||||||||||||||||| ||||||||||  ||||||||||||||          |||||||||||||||    
T  20605284 caagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggat 20605383  T
Q  287 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 352  Q
    ||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  20605384 tttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 20605449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 38 - 306
Target Start/End: Complemental strand, 26601521 - 26601253
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||| |||||  ||||||||||||| ||||| |||||       |||||||||||||||| || ||| |||  |||||           
T  26601521 gggggtgtattggatcatgtttctaaaggattttaaaagacttttttattattaaaaagtcttgtggtattcaatcaaaactctttctaatttaaaaaaa 26601422  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    |||||||| |||| ||||||||||||||||||||  |||||||||||| ||||||||||||||| | || |||| ||       |||  |||||||||||    
T  26601421 gttttgtgttatttaatcaagactctttgtcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattcaa 26601322  T
Q  238 aatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaaca 306  Q
    |||||||||||||||||||  |||||||||||||  |||||||||||||||| ||||| || |||||||    
T  26601321 aatcattcaaatttcgaatgtttgtttaataaatcagattttgtgggattttctagtgaaactttaaca 26601253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 43 - 352
Target Start/End: Complemental strand, 14198892 - 14198574
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| |||  |||||       || ||    
T  14198892 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaa-gtctt 14198794  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||| | |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||  ||||||||||||||||    
T  14198793 gtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaatca 14198694  T
Q  243 ttcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 332  Q
    |||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||    
T  14198693 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatga 14198594  T
Q  333 gatttcttgagattgttttt 352  Q
    ||||||||  ||||||||||    
T  14198593 gatttcttaggattgttttt 14198574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 38 - 350
Target Start/End: Complemental strand, 305788 - 305464
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaaga-ttttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    |||| |||||||||| ||||||||| | |||||||||||| |||||| || ||       |||||||||||||||| || ||| ||| ||||||          
T  305788 gggggtgtattggatcatgattctaagcgattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 305689  T
Q  137 n-gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||| ||||||||||||| | |||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| |||||||||    
T  305688 aagtcttgtgttattcaatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 305589  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    |||||||||||||||| |||| ||||||||||||||          ||||||||||| |||||| ||||| |||||||  | ||||||||||||||||||    
T  305588 aaaatcattcaaattttgaatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaa 305489  T
Q  326 aagatgagatttcttgagattgttt 350  Q
    || ||||||||||||  ||||||||    
T  305488 aacatgagatttcttaggattgttt 305464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 34 - 327
Target Start/End: Original strand, 1789327 - 1789630
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    |||||||| |||||||||| ||||||||| | |||||||||||||||||| || ||       |||||||||||||||| || ||| ||| ||||||       
T  1789327 ttaggggggtgtattggatcatgattctaagagattttaaaagatttttttatcataaaaaagtcttgtggtattcaatcaaaactctttccaatttaaa 1789426  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||| ||||||||||||| |||||||||||| |||||||||||    ||||||||||| | | || |||| ||       |||| |||||||    
T  1789427 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagtggtat 1789526  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 323  Q
    ||||||||||||||||||||||  ||||||||||||||          |||||||||||||||||| || || ||||||| || |||||||||||||||     
T  1789527 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatc 1789626  T
Q  324 aaaa 327  Q
    ||||    
T  1789627 aaaa 1789630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 141 - 352
Target Start/End: Original strand, 43847638 - 43847859
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| || |||||||||||    
T  43847638 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaaaat 43847737  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||||||||||||  ||||||||||||||          |||||||||||| ||||| ||||| ||||||| || |||||||||| ||||||||| ||    
T  43847738 cattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacat 43847837  T
Q  331 gagatttcttgagattgttttt 352  Q
    ||||||||||  ||||||||||    
T  43847838 gagatttcttaggattgttttt 43847859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 43 - 291
Target Start/End: Original strand, 44765669 - 44765917
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       || ||    
T  44765669 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaaactctttccaatttaaaaaaagtctt 44765768  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||| ||| | || |||| ||       |||| ||||||||||||||||    
T  44765769 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 44765868  T
Q  243 ttcaaatttcgaattattgtttaataaattggattttgtgggattttgt 291  Q
    |||||||||||||  ||||||||||||||  |||||||  |||||||||    
T  44765869 ttcaaatttcgaaagattgtttaataaataagattttgatggattttgt 44765917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 239 - 362
Target Start/End: Original strand, 43078653 - 43078786
Alignment:
Q  239 atcattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 328  Q
    |||||||||||||||||| ||||||||||||||||||          |||||||||||||| |||||||||||||||| ||||||||||||||| |||||    
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  329 atgagatttcttgagattgtttttcttttaaaag 362  Q
    || ||||||||||||||||||||| |||||||||    
T  43078753 ataagatttcttgagattgtttttgttttaaaag 43078786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 97 - 352
Target Start/End: Complemental strand, 5093309 - 5093044
Alignment:
Q  97 tcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaat 196  Q
    |||||||||||||||| || ||| ||| ||||||       || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||    
T  5093309 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaat 5093210  T
Q  197 caagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggat 286  Q
    |||||   || |||| ||       |||| || |||||||||||||||||||||| |||  ||||||||||||||          |||||||||||||||    
T  5093209 caagacgcttaatcacttaaaaaaagtctagtagtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggat 5093110  T
Q  287 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 352  Q
    ||| || || ||||||| || ||||||||||||||| |||| ||||||||||||  ||||||||||    
T  5093109 tttctaatgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgttttt 5093044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 54 - 340
Target Start/End: Original strand, 32125155 - 32125454
Alignment:
Q  54 atgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaa 153  Q
    |||||| || |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       || ||||| |||||||    
T  32125155 atgattttaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaa 32125254  T
Q  154 tcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcat---catttnnnnnnngtcttgtggtattcaaaatcattcaaatt 250  Q
    |||| | |||||||||||| ||||||||| ||  |||||||||||||| | || ||   |||||       |||  ||||||||||||||||||||||||    
T  32125255 tcaaaattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaagtggtattcaaaatcattcaaatt 32125354  T
Q  251 tcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 340  Q
    |||||  ||||||||||||||          |||||||||||||||||| ||||  ||||||| || |||||||||||||||||||| ||||||||||||    
T  32125355 tcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaatatgagatttctt 32125454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 43 - 201
Target Start/End: Original strand, 20605046 - 20605204
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||| |||||||| ||       |||||||||||||||| || ||| ||| ||||||       || ||    
T  20605046 tgtattggatcatgattctaagggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 20605145  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaaga 201  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||  ||||||||||||||    
T  20605146 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 20605204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 142 - 352
Target Start/End: Original strand, 9120119 - 9120339
Alignment:
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatc 241  Q
    ||||||||||||||||||||||||   |||||||||||||||||   ||||||||||||||| || |||| ||        ||| ||| |||||||||||    
T  9120119 tgtggtattcaatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatc 9120218  T
Q  242 attcaaatttcgaattattgtttaataaatt----------ggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 331  Q
    ||||| ||||  ||  |||||||||||||||          ||||||||||||||||| ||||| |||||||  | | |||| ||||||||||||| |||    
T  9120219 attcagattttaaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaacatg 9120318  T
Q  332 agatttcttgagattgttttt 352  Q
    |||||||||  ||||||||||    
T  9120319 agatttcttaggattgttttt 9120339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 36 - 181
Target Start/End: Original strand, 378866 - 379011
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||| |||||| || |||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||         
T  378866 agggggatgtattggatcatgattataagggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaa 378965  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagt 181  Q
      || ||||||||||||||||| ||| ||| |||||| ||||||||    
T  378966 aagtcttgtggtattcaatcaaaactttttctcatttaaaaaaagt 379011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 303 - 362
Target Start/End: Original strand, 7027051 - 7027110
Alignment:
Q  303 aacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  7027051 aacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttattttaaaag 7027110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 43825078 - 43825131
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43825078 aggggaatgtattggattatgattctatgagattttaaaagattttttaattat 43825131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 21370687 - 21370631
Alignment:
Q  222 gtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattt 278  Q
    |||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaattggattt 21370631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 43078560 - 43078638
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaat 112  Q
    ||||| ||||||||||||||| |||||||||||||||||||||| ||||| |||||       ||||||||||||||||    
T  43078560 ttaggaggatgtattggattaggattctatgggattttaaaagactttttgattatgaaaaagtcttgtggtattcaat 43078638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 20605102 - 20605198
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    |||||||||||||||||||||||||   |||| ||||||||||||   ||||||||||||||| ||  ||||||       ||||||||||||||||    
T  20605102 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 20605198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 19144904 - 19145078
Alignment:
Q  29 tagtcttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaat 128  Q
    |||| ||| |||| ||||||||| |||||||||| |||||||||||| ||||||| || ||       |||||||||||||||| || |||  || |||     
T  19144904 tagtattaagggggtgtattggaatatgattctaagggattttaaaatatttttttatcataaaaaagtcttgtggtattcaatcaaaactcatttcaa- 19145002  T
Q  129 ttnnnnnnngttttgtggtattcaatcaag---actctttgtcattttaaaaaagtcttgaagtattcaatcaaga 201  Q
    ||        | ||||||||||||||||||   ||||||| |||||| ||||||| ||||  ||||||||||||||    
T  19145003 ttaaaaaaaatcttgtggtattcaatcaagagtactctttatcatttaaaaaaagacttgtggtattcaatcaaga 19145078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 9120057 - 9120102
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    |||| |||||||||| ||||||||| |||||||||||||| |||||    
T  9120057 gggggtgtattggatcatgattctaagggattttaaaagacttttt 9120102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 8172170 - 8172210
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagt 181  Q
    |||||||||| |||||||||||||||||| || ||||||||    
T  8172170 ttgtggtatttaatcaagactctttgtcacttcaaaaaagt 8172210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 24193595 - 24193631
Alignment:
Q  170 ttttaaaaaagtcttgaagtattcaatcaagattttt 206  Q
    ||||||||||||||||  |||||||||||||||||||    
T  24193595 ttttaaaaaagtcttggggtattcaatcaagattttt 24193631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 192; Significance: 1e-104; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 36 - 362
Target Start/End: Original strand, 5948995 - 5949320
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||||| |||||||| ||||||||||||||||||||||  ||||||||||       | |||||||||||||| || ||||||||||| ||         
T  5948995 agggggatgtgttggattaggattctatgggattttaaaagaccttttaattatgaaaaatttttgtggtattcaatcaaaactttttgcaacttaaaaa 5949094  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||        |||||||||||||    
T  5949095 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaa-tcttgtggtattc 5949193  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 335  Q
    ||||||||||||||||||||  |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5949194 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 5949293  T
Q  336 ttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||||    
T  5949294 ttcttgagattgtttttcttttaaaag 5949320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 42 - 362
Target Start/End: Complemental strand, 4240766 - 4240446
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttt 141  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||||||       | |||||||||||||| || ||||||||||| ||        | |    
T  4240766 atgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaaatct 4240667  T
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatc 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||||||||||    
T  4240666 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatc 4240567  T
Q  242 attcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 341  Q
    ||||||||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4240566 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaatagatgagatttcttg 4240467  T
Q  342 agattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||    
T  4240466 agattgtttttcttttaaaag 4240446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 34 - 362
Target Start/End: Complemental strand, 14000427 - 14000089
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||       
T  14000427 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 14000328  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
         | ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||       ||||||||||||    
T  14000327 aaaaatcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 14000228  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 323  Q
    |||||||||||||||||| |||  ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14000227 tcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 14000128  T
Q  324 aaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  14000127 aaaagatgagatttcttgagattgtttttattttaaaag 14000089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 34 - 362
Target Start/End: Complemental strand, 40014021 - 40013696
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||||| ||||||       ||||||| |||||||| || ||||||||||||||       
T  40014021 ttagggggatgtattggattaggattct--gggattttaaaagattttt-aattatgaaaaagtcttgtgatattcaatcaagactttttgcaatttaaa 40013925  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||        ||||||| |||    
T  40013924 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtgttat 40013825  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 333  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40013824 tcaaaatcattcaaatttcgaaggattgtttaatcaattggattttaatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 40013725  T
Q  334 atttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||| |||| ||||    
T  40013724 atttcttgagattgtttttgtttttaaag 40013696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 40 - 362
Target Start/End: Original strand, 13925821 - 13926153
Alignment:
Q  40 ggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngt 139  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||||||       |||||||||||| ||| || ||||||||||| ||       ||    
T  13925821 ggatgtgttggattaggattctataggattttaaaagattttttaattatgaaaaagtcttgtggtatttaatcaagactttttgcaacttaaaaaaagt 13925920  T
Q  140 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||       ||||||||||||||||||    
T  13925921 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattacttaaaaaaagtcttgtggtattcaaaa 13926020  T
Q  240 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 329  Q
    ||||||||||||||||  ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13926021 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaaga 13926120  T
Q  330 tgagatttcttgagattgtttttcttttaaaag 362  Q
    ||| |||||||||||||||||||||| ||||||    
T  13926121 tgatatttcttgagattgtttttcttctaaaag 13926153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 33 - 357
Target Start/End: Complemental strand, 4550580 - 4550246
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||      
T  4550580 cttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaa 4550481  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
         || ||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| ||||||||| ||       |||||||||||    
T  4550480 aaaaagtcttgtggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 4550381  T
Q  233 ttcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 322  Q
    |||||||||||||||||||||||  ||||||||||||||          |||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  4550380 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaagagtctttcat 4550281  T
Q  323 gaaaagatgagatttcttgagattgtttttctttt 357  Q
    ||||||||||||||| |||||||||||||| ||||    
T  4550280 gaaaagatgagatttgttgagattgtttttttttt 4550246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 37 - 362
Target Start/End: Complemental strand, 1152422 - 1152087
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    |||||||||||||||||| ||||||||| |||||||||||| |||||||||||       |||||||||||| ||| || | ||||||||| ||          
T  1152422 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtatttaatcaagattttttgcaacttaaaaaa 1152323  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
     || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||| ||       |||||||||||||||    
T  1152322 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattca 1152223  T
Q  237 aaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 326  Q
    ||||||||||||||||||   ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1152222 aaatcattcaaatttcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaa 1152123  T
Q  327 agatgagatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||| |||||||||||||||||||||    
T  1152122 agatgagatttcttaagattgtttttcttttaaaag 1152087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 32 - 362
Target Start/End: Original strand, 37013796 - 37014116
Alignment:
Q  32 tcttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttn 131  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||     
T  37013796 tcttagagggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaactta 37013895  T
Q  132 nnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggt 231  Q
          || ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||| ||       |||||| |||    
T  37013896 aaaaaagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggt 37013995  T
Q  232 attcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 331  Q
    ||||||||||||||||||||||||   ||||||||||||||          |||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  37013996 attcaaaatcattcaaatttcgaagggttgtttaataaatt----------ggattttgtagtataattttaacaagaaaaagtctttcataaaaagatg 37014085  T
Q  332 agatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||||||||    
T  37014086 agatttcttgagattgtttttcttttaaaag 37014116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 105 - 362
Target Start/End: Complemental strand, 1461389 - 1461132
Alignment:
Q  105 tattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagattt 204  Q
    ||||||||||| ||||||||||| ||       || ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||    
T  1461389 tattcaattaagactttttgcaacttaaaaatagtcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagactt 1461290  T
Q  205 ttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaa 304  Q
    ||||||| ||       |||||| | |||||||||||||||||||||||||  |||||||||||||||||||||||  |||||||||| |||||||||||    
T  1461289 ttcatcacttaaaaaaagtcttgcgctattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtactgtaattttaa 1461190  T
Q  305 caagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1461189 caagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttcttttaaaag 1461132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 38 - 353
Target Start/End: Original strand, 22746185 - 22746502
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| |||||||| | ||||||||||| |||||||||||       ||||||||||||| ||||| ||||||||||| ||           
T  22746185 ggggatgtattggattaggattctatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcgattaagactttttgcaacttaaaaaaa 22746284  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| | ||||||||| ||       |||||||| |||||||    
T  22746285 gtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaa 22746384  T
Q  238 aatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtag--tgtaattttaacaagaaaaagtctttcatgaaaagatgagat 335  Q
    ||||||||||||||||||| |||||||||||||||| ||||||  ||||||||| |  |||||||||||||||||||| |||||||||||||||| ||||    
T  22746385 aatcattcaaatttcgaatgattgtttaataaattgaattttgatggattttgtgggatgtaattttaacaagaaaaactctttcatgaaaagataagat 22746484  T
Q  336 ttcttgagattgtttttc 353  Q
    ||||| ||||||||||||    
T  22746485 ttcttaagattgtttttc 22746502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 150 - 362
Target Start/End: Complemental strand, 7947779 - 7947557
Alignment:
Q  150 tcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaat 249  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||||| | |||||||||||||||||||    
T  7947779 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaat 7947680  T
Q  250 ttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 339  Q
    ||||||  ||||||||||||||          |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7947679 ttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagagatttct 7947580  T
Q  340 tgagattgtttttcttttaaaag 362  Q
    ||| |||||||||||||||||||    
T  7947579 tgaaattgtttttcttttaaaag 7947557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 177 - 362
Target Start/End: Original strand, 39852372 - 39852567
Alignment:
Q  177 aaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggat 276  Q
    |||||||||| |||||||||||||| || |||||||||       ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||    
T  39852372 aaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggat 39852471  T
Q  277 tttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39852472 tttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttgttttaaaag 39852567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 34 - 352
Target Start/End: Original strand, 21146951 - 21147279
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    |||||||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       || ||||||||||||| || ||| ||| ||||||       
T  21146951 ttaggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctttccaatttaaa 21147050  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| |||||||    
T  21147051 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 21147150  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 323  Q
    ||||||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||    
T  21147151 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 21147250  T
Q  324 aaaagatgagatttcttgagattgttttt 352  Q
    |||| ||||||||||||  ||||||||||    
T  21147251 aaaacatgagatttcttaggattgttttt 21147279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 34 - 352
Target Start/End: Complemental strand, 33656365 - 33656035
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||| || |||||||||| |||||| || |||||||||||||||||||| || ||       |||||||||||||||| || ||| ||| ||||||       
T  33656365 ttaggagggtgtattggatcatgattttaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaa 33656266  T
Q  134 nnnngttttgtggtattcaatcaagactcttt--gtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggt 231  Q
        || ||||| ||||||||||||| |||||  ||||||| ||||||||||||  |||||||||||||| | || |||| ||        |||  ||||    
T  33656265 aaaagtcttgtgttattcaatcaagattctttttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggt 33656166  T
Q  232 attcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 321  Q
    ||||||||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||    
T  33656165 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 33656066  T
Q  322 tgaaaagatgagatttcttgagattgttttt 352  Q
    |||||| ||||||||||||  ||||||||||    
T  33656065 tgaaaatatgagatttcttaggattgttttt 33656035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 141 - 340
Target Start/End: Complemental strand, 5273134 - 5272925
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||   |||||||||||||| | || |||||||       |||| ||||||||||||||    
T  5273134 ttgtgctattcaatcaagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaat 5273035  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||||||||||||| ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| ||    
T  5273034 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacat 5272935  T
Q  331 gagatttctt 340  Q
    ||||||||||    
T  5272934 gagatttctt 5272925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 141 - 340
Target Start/End: Complemental strand, 7016954 - 7016745
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||||||||||||||||||||||   |||| |||||||||||| ||||||||||||||| | || |||| ||       |||| ||||||||||||||    
T  7016954 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 7016855  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| ||    
T  7016854 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacat 7016755  T
Q  331 gagatttctt 340  Q
    ||||||||||    
T  7016754 gagatttctt 7016745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 138 - 340
Target Start/End: Original strand, 139261 - 139473
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||| ||  |||||||||||||| |||| |||| ||       |||| |||||||||||    
T  139261 gttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaa 139360  T
Q  238 aatcattcaaatttcgaattattgtttaataaa----------ttggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||||||||||  |||||||||||||           |||||||||| |||||||  |||| |||||||| | ||||||||||||||| ||||    
T  139361 aatcattcaaatttcgaaggattgtttaataaaccagattttgatggattttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaa 139460  T
Q  328 gatgagatttctt 340  Q
     ||||||||||||    
T  139461 catgagatttctt 139473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 147 - 352
Target Start/End: Complemental strand, 9220916 - 9220711
Alignment:
Q  147 tattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 246  Q
    ||||||||||| ||||||||||||||  |||||||||||   ||||||||||||| | || |||| ||       ||||| || ||||||||||||||||    
T  9220916 tattcaatcaaaactctttgtcatttagaaaaagtcttgtgatattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattca 9220817  T
Q  247 aatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagatt 346  Q
    |||||| ||  |||||||||| |||| || ||||| ||||||| ||||  |||||||||| ||||||||||||| |||||| |||| |||||||  ||||    
T  9220816 aatttctaaggattgtttaatgaattagaatttgtaggattttatagtaaaattttaacacgaaaaagtctttcgtgaaaacatgatatttcttaggatt 9220717  T
Q  347 gttttt 352  Q
    ||||||    
T  9220716 gttttt 9220711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 145 - 280
Target Start/End: Complemental strand, 14465438 - 14465303
Alignment:
Q  145 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 244  Q
    |||||||||||||||||||||||||||| |||||||| ||   |||||||||||||| | ||||||  ||       |||||||||||||||||||||||    
T  14465438 ggtattcaatcaagactctttgtcatttaaaaaaagttttctggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcatt 14465339  T
Q  245 caaatttcgaattattgtttaataaattggattttg 280  Q
    |||||||||||  |||||||||||||| ||||||||    
T  14465338 caaatttcgaaagattgtttaataaatcggattttg 14465303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 43 - 290
Target Start/End: Original strand, 6460685 - 6460932
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    ||||||| || ||||||||| |||||||||||||||||||| || ||       |||||||||||||||| || ||| ||| ||| ||       || ||    
T  6460685 tgtattgaatcatgattctaagggattttaaaagatttttttataatgaaaaagtcttgtggtattcaatcaagactctttccaacttaaaaaaagtctt 6460784  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
     || ||||||||||||| |||||||||||| ||||||||| ||  |||||||||||||| | || |||||||        ||| ||||||||||||||||    
T  6460785 atgttattcaatcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaaatca 6460884  T
Q  243 ttcaaatttcgaattattgtttaataaattggattttgtgggattttg 290  Q
    |||||||||||||   |||||||||||||  |||||||  ||||||||    
T  6460885 ttcaaatttcgaaggtttgtttaataaatcagattttgatggattttg 6460932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 141 - 352
Target Start/End: Complemental strand, 27459164 - 27458944
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||| | || |||| ||       |||| ||||||||||||||    
T  27459164 ttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaa-gtctagtggtattcaaaat 27459066  T
Q  241 cattcaaatttcgaattattgtttaataaatt----------ggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||| |||| |||  |||||||||||||||          ||||||||||||||||| ||||| ||||||| || |||||| || |||||||||| ||    
T  27459065 cattcagattttgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatcattcatgaaaacat 27458966  T
Q  331 gagatttcttgagattgttttt 352  Q
    || |||||||  ||||||||||    
T  27458965 gatatttcttaggattgttttt 27458944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 141 - 359
Target Start/End: Complemental strand, 32158113 - 32157879
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggtattcaaaa 239  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||  ||||||||||||||    | |||| ||        |||| |||||||||||||    
T  32158113 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaa 32158014  T
Q  240 tcattcaaatttcgaattattgtttaataaatt----------ggattttgtgggattttgtagtgtaattttaacaagaaaa---agtctttcatgaaa 326  Q
    ||||||||||||||||  |||||||||||||||          ||||||||||||||||| ||||  ||||||| || |||||   ||||||||||||||    
T  32158013 tcattcaaatttcgaaggattgtttaataaattagattttgacggattttgtgggattttctagtaaaattttagcacgaaaaaatagtctttcatgaaa 32157914  T
Q  327 agatgagatttcttgagattgt--ttttcttttaa 359  Q
    | |||||||||||| | |||||  |||||||||||    
T  32157913 acatgagatttcttaaaattgttcttttcttttaa 32157879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 43 - 280
Target Start/End: Original strand, 9689554 - 9689787
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||||||||||||| |||||||||| ||| |||||| ||||       |||||||||||||||| || ||| ||| ||| ||       ||  |    
T  9689554 tgtattggattatgattctaagggattttaatagacttttta-ttatgaaaaagtcttgtggtattcaatcaagactctttccaacttaaaagaagtcgt 9689652  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaag-tcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatc 241  Q
     ||||||||||||||||||||| ||||||| ||||||  || ||  |||||||||||||| | ||||||| ||       ||||||||||||| ||||||    
T  9689653 ctggtattcaatcaagactctt-gtcatttaaaaaaacatcgtg--gtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatttaaaatc 9689749  T
Q  242 attcaaatttcgaattattgtttaataaattggattttg 280  Q
    ||| ||||||||||| ||||||| ||||||| |||||||    
T  9689750 att-aaatttcgaatgattgtttgataaattagattttg 9689787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 327
Target Start/End: Original strand, 849225 - 849334
Alignment:
Q  228 tggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 317  Q
    ||||||||||||||||||||||||||||  ||||||||||||||          | |||||||||||||||| ||||| ||||||| || ||||||||||    
T  849225 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaaagtct 849324  T
Q  318 ttcatgaaaa 327  Q
    ||||||||||    
T  849325 ttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 183
Target Start/End: Complemental strand, 7017015 - 7016870
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||           
T  7017015 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaa 7016916  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtct 183  Q
    || |||| |||||||||||||||||||  ||| || ||||||||||    
T  7016915 gtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtct 7016870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 203
Target Start/End: Complemental strand, 5273275 - 5273114
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnn-tcttgtggtattcaattaacactttttgcaatttnnnnnnngttt 141  Q
    |||||||||| |||||| || |||||||||||||| ||||| || ||        |||||||||||||||| || | | ||| ||||||       || |    
T  5273275 tgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaaaatcttgtggtattcaatcaagattctttccaatttaaaaaaagtct 5273176  T
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatt 203  Q
    |||| ||||||||||||| | |||||||||| ||||||||||||   |||||||||||||||    
T  5273175 tgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaagatt 5273114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 7948630 - 7948546
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaa 127  Q
    |||||||||||| |||||||| ||||||||||||| ||||| |||||       ||| |||||||||||| || |||||||||||    
T  7948630 tgtattggattaggattctataggattttaaaagacttttttattatgaaaaagtctcgtggtattcaatcaagactttttgcaa 7948546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 5273218 - 5273153
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagattttt 206  Q
    ||||||||||||||||||| |||||   |||| ||||||||||||   ||||||||||||||||||    
T  5273218 ttgtggtattcaatcaagattctttccaatttaaaaaaagtcttgtgttattcaatcaagattttt 5273153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 43319130 - 43319179
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    |||||||| |||||||||| ||||||||| |||||||||||||| |||||    
T  43319130 ttaggggggtgtattggatcatgattctaagggattttaaaagacttttt 43319179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 289
Target Start/End: Complemental strand, 1511451 - 1511409
Alignment:
Q  247 aatttcgaattattgtttaataaattggattttgtgggatttt 289  Q
    |||||||||  ||||||||||| ||||||||||||||||||||    
T  1511451 aatttcgaagaattgtttaatagattggattttgtgggatttt 1511409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 32158156 - 32158059
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcatttt--aaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    ||||||||||||||||||||||||| ||| |||  ||||||||||||   ||||||||||||||| ||  ||||||       ||||||||||||||||    
T  32158156 ttgtggtattcaatcaagactcttt-tcaatttaaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 32158059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 16894117 - 16894057
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaaga 201  Q
    ||||||||||||||||| | |||||   |||| ||||||||||||  ||||||||||||||    
T  16894117 ttgtggtattcaatcaaaattctttccaatttaaaaaaagtcttgtggtattcaatcaaga 16894057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 17518474 - 17518510
Alignment:
Q  170 ttttaaaaaagtcttgaagtattcaatcaagattttt 206  Q
    ||||||||||||||||  |||||||||||||||||||    
T  17518474 ttttaaaaaagtcttgtggtattcaatcaagattttt 17518510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 191; Significance: 1e-103; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 36 - 362
Target Start/End: Original strand, 28342227 - 28342563
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || | ||||||||||||         
T  28342227 agggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattttttgcaatttaaaaa 28342326  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||       ||||||||||||||    
T  28342327 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttgtggtattc 28342426  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    ||||||||||||||||||||  ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28342427 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 28342526  T
Q  326 aagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||||| |||||||||    
T  28342527 aagatgagatttcttgagattgtttttattttaaaag 28342563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 38 - 362
Target Start/End: Original strand, 23101180 - 23101514
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||||||||| |||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || | ||||||||||||           
T  23101180 ggggatgtatcggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagaatttttgcaatttaaaaaaa 23101279  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||||||    
T  23101280 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 23101379  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||||||||||  ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23101380 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 23101479  T
Q  328 gatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||| |||||||||    
T  23101480 gatgagatttcttgagattgtttttattttaaaag 23101514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 38 - 362
Target Start/End: Complemental strand, 29615082 - 29614748
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||           
T  29615082 ggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaa 29614983  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       |||||||| |||||||    
T  29614982 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaa 29614883  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||||||||||  ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614882 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 29614783  T
Q  328 gatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||| ||||| |||||||||    
T  29614782 gatgagatttcttgagattatttttattttaaaag 29614748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 40 - 362
Target Start/End: Original strand, 39783983 - 39784315
Alignment:
Q  40 ggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngt 139  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||||       || ||||||||||||| || ||||||||||||||       ||    
T  39783983 ggatgtattggattgagattctatgggattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaatttaaaaaaagt 39784082  T
Q  140 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
     |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||||||||    
T  39784083 cttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaa 39784182  T
Q  240 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 329  Q
    ||||| ||||||||||  ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39784183 tcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 39784282  T
Q  330 tgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||| |||||||||    
T  39784283 tgagatttcttgagattgtttttattttaaaag 39784315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 39 - 362
Target Start/End: Complemental strand, 9882553 - 9882221
Alignment:
Q  39 gggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnng 138  Q
    |||||||||||||||| |||||||| ||||||||||||| |||||||||||       |||| ||||||||||| || ||||||||||||||       |    
T  9882553 gggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaaaag 9882454  T
Q  139 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaa 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||||||||||||||||    
T  9882453 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaa 9882354  T
Q  239 atcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 328  Q
    |||||||||||||||||| ||||||||||||||          ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||     
T  9882353 atcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaaaa 9882255  T
Q  329 atgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||||||||||||    
T  9882254 atgagatttcttgagattgtttttcttttaaaag 9882221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 34 - 362
Target Start/End: Original strand, 37327805 - 37328133
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    |||||||||||||| |||||| ||||| |||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||       
T  37327805 ttagggggatgtataggattaagattcaatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaa 37327904  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| | ||       ||||||||||||    
T  37327905 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtat 37328004  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 333  Q
    ||||||||||||||||||| ||  |||||||||||||||| ||||||  |||||||||||| |||||||||||| |||||||||||||||||||||| ||    
T  37328005 tcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggattttgtagtataattttaacaaaaaaaagtctttcatgaaaagataag 37328104  T
Q  334 atttcttgagattgtttttcttttaaaag 362  Q
    |||| ||||||||||||||||||||||||    
T  37328105 attttttgagattgtttttcttttaaaag 37328133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 30 - 362
Target Start/End: Complemental strand, 46405757 - 46405425
Alignment:
Q  30 agtcttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatt 129  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||||| |||||||||||       || ||||||||||||| || ||||||||||| |    
T  46405757 agtcttagggggatatattggattaggattctatggaattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaact 46405658  T
Q  130 tnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtg 229  Q
    |        | ||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||    
T  46405657 taaaaaaaatcttgcggtattcaatcaagactctttgtcgttttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtg 46405558  T
Q  230 gtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 329  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| ||| || ||||||    
T  46405557 gtattcaaaatcattcaaatttcaaatgattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtatttaataaaaaga 46405458  T
Q  330 tgagatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||||||||||    
T  46405457 tgagatttcttgagattgtttttcttttaaaag 46405425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 36 - 362
Target Start/End: Original strand, 18838269 - 18838605
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| |||||||||||||| ||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||         
T  18838269 agggggatgtattggattaggattctatgggattataaaagactttttaattatgaaaatgtcttgtggtattcaatcaagactttttgcaacttaaaaa 18838368  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
       | ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||  ||       ||||||||||||||    
T  18838369 aaatattgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattc 18838468  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    ||||||||||||||||||||  ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18838469 aaaatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaa 18838568  T
Q  326 aagatgagatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||||||||||||||    
T  18838569 aagatgagatttcttgagattgtttttcttttaaaag 18838605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 41 - 362
Target Start/End: Complemental strand, 44122216 - 44121894
Alignment:
Q  41 gatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaac-actttttgcaatttnnnnnnngt 139  Q
    ||||||||||||||  ||||||| |||||||||||||||||||||||||       | |||||||||||||| ||  | ||||||||| ||             
T  44122216 gatgtattggattagaattctataggattttaaaagattttttaattatgaaaaagtattgtggtattcaatcaaagattttttgcaacttaaaaaaaaa 44122117  T
Q  140 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||        |||||||||||||||||    
T  44122116 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaa 44122017  T
Q  240 tcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 339  Q
    ||||||||||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  44122016 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttaatgaaaagatgagattttt 44121917  T
Q  340 tgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||    
T  44121916 tgagattgtttttcttttaaaag 44121894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 38 - 362
Target Start/End: Original strand, 3022808 - 3023142
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||       | || ||||||| ||| || |||||||  || ||           
T  3022808 ggggatgtattgaattaggattctatgggattttaaaagattttttaattatgaaaaagttttatggtatttaatcaagactttttaaaacttaaaaaaa 3022907  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||       ||||||||||||||||    
T  3022908 gtcttgtggtattcaatcaagactttttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaa 3023007  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||||||||||  ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3023008 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaa 3023107  T
Q  328 gatgagatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||||||||||||    
T  3023108 gatgagatttcttgagattgtttttcttttaaaag 3023142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 60 - 362
Target Start/End: Complemental strand, 40461003 - 40460701
Alignment:
Q  60 ctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaaga 159  Q
    ||||| |||||||||||| |||||||||||       | |||||||||| ||| || ||||||||||||||       || ||||| |||||||| ||||    
T  40461003 ctatgagattttaaaagactttttaattatgaaaaagttttgtggtatttaatcaagactttttgcaatttaaaaaatgtcttgtgatattcaattaaga 40460904  T
Q  160 ctctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattat 259  Q
    |||||||||||||||||||||||||||  ||||||||||||| ||||||||| ||       ||||||||||||||||||||||||||||||||||| ||    
T  40460903 ctctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgat 40460804  T
Q  260 tgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaa 359  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  40460803 tgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaatatgagatttcttgagattgtttttcttttaa 40460704  T
Q  360 aag 362  Q
    |||    
T  40460703 aag 40460701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 38 - 362
Target Start/End: Original strand, 7993024 - 7993358
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| |||||||| ||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||           
T  7993024 ggggatgtattggattaagattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 7993123  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| | ||||||||| ||       ||||| ||||||||||    
T  7993124 gtctcgtggtattcaatcaagactctttgccattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattcaa 7993223  T
Q  238 aatcattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||||||||||  |||||||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  7993224 aatcattcaaatttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 7993323  T
Q  328 gatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||| |||||||||||||||||||||||||||||||    
T  7993324 gataagatttcttgagattgtttttcttttaaaag 7993358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 141 - 362
Target Start/End: Original strand, 509641 - 509862
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||       |||||||||||||||||||    
T  509641 ttgtggtattcaatcaagactatttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 509740  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 340  Q
    |||||||||||||||  |||||||||||||||||||||||  |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  509741 cattcaaatttcgaacgattgtttaataaattggattttgatggattttgtagtgggattttaacaagaaaaagtctttcatgaaaagatgagatttctt 509840  T
Q  341 gagattgtttttcttttaaaag 362  Q
    |||||||||||| |||||||||    
T  509841 gagattgtttttattttaaaag 509862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 39 - 362
Target Start/End: Original strand, 39027980 - 39028303
Alignment:
Q  39 gggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnng 138  Q
    |||||||||||||||| |||| ||| | ||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||            
T  39027980 gggatgtattggattaggattttatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaaa 39028079  T
Q  139 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaa 238  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| ||       |||||||| ||||||||    
T  39028080 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaa 39028179  T
Q  239 atcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 338  Q
    ||| |||||||| ||||  |||||||||||||||||||||||  |||||||||||||||| |||||||||||||||| |||||||||||   ||||||||    
T  39028180 atcgttcaaattacgaaagattgtttaataaattggattttgatggattttgtagtgtaactttaacaagaaaaagtttttcatgaaaaacagagatttc 39028279  T
Q  339 ttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||    
T  39028280 ttgagattgtttttcttttaaaag 39028303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 41 - 361
Target Start/End: Original strand, 33382522 - 33382852
Alignment:
Q  41 gatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtt 140  Q
    |||||||| ||||| ||||||||| |||||||||||| |||||||||||       |||| ||||||||||| || ||||||||||| ||       |      
T  33382522 gatgtattagattaggattctatgagattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaacttaaaaaaagcc 33382621  T
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||  |||||||||||||    
T  33382622 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaat 33382721  T
Q  241 cattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||| ||||||||||  ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33382722 catttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagat 33382821  T
Q  331 gagatttcttgagattgtttttcttttaaaa 361  Q
    ||||||| || ||||||||||||||||||||    
T  33382822 gagatttatttagattgtttttcttttaaaa 33382852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 47 - 358
Target Start/End: Complemental strand, 28035114 - 28034793
Alignment:
Q  47 ttggattatgattctatgggattttaaaaga-ttttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtg 145  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||       | ||||||||||||||||| | ||||||||| ||       || |||||    
T  28035114 ttggattaggattctatggaattttaaaagacttttttaattattaaaaagttttgtggtattcaattaagattttttgcaacttaaaaaa-gtcttgtg 28035016  T
Q  146 gtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattc 245  Q
    |||||||||||||||| ||||||||||||||||||||||||  ||||||||||||| ||||||||| ||       ||||||||||||||||||| ||||    
T  28035015 gtattcaatcaagactttttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattc 28034916  T
Q  246 aaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 335  Q
    ||||||| ||  ||||||||||||||          |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28034915 aaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagatgagat 28034816  T
Q  336 ttcttgagattgtttttctttta 358  Q
    |||||||||||||||||||||||    
T  28034815 ttcttgagattgtttttctttta 28034793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 38 - 337
Target Start/End: Complemental strand, 33892569 - 33892269
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||||||||       | |||||||||||||| || | ||||||||||||           
T  33892569 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaaaattttttgcaatttaaaaaaa 33892470  T
Q  138 gttttgt-ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
      ||  | ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||||||||||||||    
T  33892469 aattcttaggtattcaatcaacactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattca 33892370  T
Q  237 aaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 336  Q
    |||||||||||||||||||| |||||| |||||||||||||||   | |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33892369 aaatcattcaaatttcgaatgattgttaaataaattggatttttatgaattttgtagtgtaattttaacaagaaaaagtctttcattaaaagatgagatt 33892270  T
Q  337 t 337  Q
    |    
T  33892269 t 33892269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 138 - 362
Target Start/End: Original strand, 29585497 - 29585720
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| | |||| |||| ||       ||||| ||||||||||    
T  29585497 gttttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaaactttt-atcacttaaaaaaagtcttctggtattcaa 29585595  T
Q  238 aatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 337  Q
    |||||||||||||| |||  |||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  29585596 aatcattcaaattttgaaggattgtttaataatttggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgaaattt 29585695  T
Q  338 cttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||    
T  29585696 cttgagattgtttttcttttaaaag 29585720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 34 - 312
Target Start/End: Original strand, 32883659 - 32883948
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaat-taacactttttgcaatttnn 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       | ||||| |||||||| ||| ||||||||||| ||      
T  32883659 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatgaaaaagttttgtgatattcaatctaagactttttgcaacttaa 32883758  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
         || || |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||| ||       |||||||||||    
T  32883759 aaaaagtcttatggtattcaatcaagactttttgtcattttaaaaaagtcttgaagtattcaattaagacttttcatcacttaaaaaaagtcttgtggta 32883858  T
Q  233 ttcaaaatcattcaaatttcgaattattgtttaataaattggatttt----------gtgggattttgtagtgtaattttaacaagaaaa 312  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||          |||||||||||||||||||||||||||||||||    
T  32883859 ttcaaaatcattcaaatttcgaatgattgtttattaaattggattttgatggatttcgtgggattttgtagtgtaattttaacaagaaaa 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 50 - 362
Target Start/End: Original strand, 12740267 - 12740588
Alignment:
Q  50 gattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtat 149  Q
    ||||| ||||||||| |||||||||||| |||||||||||       ||| ||| |||| |||||| ||||||||||| ||       || |||||||||    
T  12740267 gattaggattctatgagattttaaaagactttttaattatgaaaaaatctggtgatatttaattaagactttttgcaacttaaaaaaagtcttgtggtat 12740366  T
Q  150 tcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaat 249  Q
    |||||||||| ||||||||||||| |||||||||||| ||||| |||||||||||||||||||||       |||| |||||||||||||||||||||||    
T  12740367 tcaatcaagattctttgtcatttttaaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggtattcaaaatcattcaaat 12740466  T
Q  250 ttcgaattattgtttaataaat---------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 340  Q
    ||| ||  ||||||||||||||         | |||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  12740467 ttcaaaggattgtttaataaatggattttgatagattttgtgggattttatagtgtaattttaacaagagaaagtctttcataaaaagatgagatttctt 12740566  T
Q  341 gagattgtttttcttttaaaag 362  Q
     |||||||||| ||||||||||    
T  12740567 aagattgttttacttttaaaag 12740588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 36 - 352
Target Start/End: Complemental strand, 17001343 - 17001037
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| ||||||||| |||||||||| | |||||||||||       |||||||||||||||| || ||||||||||| ||         
T  17001343 agggggatgtattggattaggattctatgagattttaaaaaactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaa 17001244  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||| ||||||||| ||        | | |||||||||    
T  17001243 aagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaataaagacttttcatcacttaaaaaaaatatcgtggtattc 17001144  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 335  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||          ||||||||| |||||||||||||||||||||||||| |||||||    
T  17001143 aaaatcattcaaatttcgaaggattgtttaataaattggattttgt----------agtgtaattataacaagaaaaagtctttcatgaaaatatgagat 17001054  T
Q  336 ttcttgagattgttttt 352  Q
    ||||||| |||||||||    
T  17001053 ttcttgatattgttttt 17001037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 149 - 360
Target Start/End: Original strand, 8675326 - 8675547
Alignment:
Q  149 ttcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaa 248  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||||||||||||| |||    
T  8675326 ttcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaa 8675425  T
Q  249 tttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 338  Q
     ||||||  ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  8675426 cttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttc 8675525  T
Q  339 ttgagattgtttttcttttaaa 360  Q
    ||||||||||||||||||||||    
T  8675526 ttgagattgtttttcttttaaa 8675547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 48 - 351
Target Start/End: Original strand, 19251431 - 19251734
Alignment:
Q  48 tggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggt 147  Q
    ||||||| ||||||| | |||||||||||| ||||||||||        |||||| ||||||||| || ||| ||||||| ||       || |||||||    
T  19251431 tggattaggattctaagagattttaaaagactttttaattacgaaaaagtcttgtagtattcaatcaagactctttgcaacttaaaaaaagtcttgtggt 19251530  T
Q  148 attcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaa 247  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||       |||| |||||||||||||||||||||    
T  19251531 attcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaa 19251630  T
Q  248 atttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 347  Q
    ||||||||  |||||||||||||||||||||||  ||||||| | ||| ||||||| ||| |||||||||||||||||||  ||| |||||||| ||||     
T  19251631 atttcgaaggattgtttaataaattggattttgatggattttcttgtgaaattttagcaataaaaagtctttcatgaaaacctgaaatttcttgggatta 19251730  T
Q  348 tttt 351  Q
    ||||    
T  19251731 tttt 19251734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 36 - 361
Target Start/End: Original strand, 10068346 - 10068682
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||||||||||| |||||||||   ||||||||||||| |||||||||||       ||||||| |||||||| || ||| ||||||||||         
T  10068346 agggggatgtattggaatatgattctgatggattttaaaagactttttaattatgaaaaagtcttgtgatattcaatcaaaactctttgcaatttaaaaa 10068445  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtctt-gaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtatt 234  Q
      || |||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||| ||       |||||||||||||    
T  10068446 aagtcttgtggtatttaatcaagactctttgccattttaaaaaagtctttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtatt 10068545  T
Q  235 caaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 324  Q
    ||||||||||||||||| |||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| |||||| |    
T  10068546 caaaatcattcaaattttgaaggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcataa 10068645  T
Q  325 aaagatgagatttcttgagattgtttttcttttaaaa 361  Q
    ||| ||||||||| ||  |||||||||||||||||||    
T  10068646 aaacatgagatttgttaggattgtttttcttttaaaa 10068682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 36 - 361
Target Start/End: Complemental strand, 3797377 - 3797052
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||| |||||||||||||  | ||||||||||| |||||||||||       | ||| |||||||||| || ||| ||||||||||         
T  3797377 agggggatgtattagattatgattctaatgaattttaaaagactttttaattatgaaatagttttgaggtattcaatcaagactctttgcaatttaaaaa 3797278  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      ||  | || |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||||    
T  3797277 aagtcatctgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 3797178  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaattggattttg-tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 334  Q
    || |||||| |||||| |||  ||||||||||||||| ||||||| ||||||||| ||||| ||||||| || |||||||||||| | ||||| || |||    
T  3797177 aagatcattaaaattttgaaggattgtttaataaattagattttgatgggattttctagtgaaattttagcatgaaaaagtcttttaagaaaacat-aga 3797079  T
Q  335 tttcttgagattgtttttcttttaaaa 361  Q
    ||||||  |||||||||||||||||||    
T  3797078 tttcttaggattgtttttcttttaaaa 3797052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 45 - 362
Target Start/End: Complemental strand, 44257077 - 44256750
Alignment:
Q  45 tattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgt 144  Q
    |||||||||| ||||| ||| |||||||||| | |||||||||||       |  ||||||||||||| || |||||||||||  |       || ||||    
T  44257077 tattggattaggattcgatgagattttaaaaaagtttttaattatgaaaaagttctgtggtattcaatcaagactttttgcaaccttaaaaaagtcttgt 44256978  T
Q  145 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 244  Q
     ||||| |||||||||| ||||||||||||||||| |||| | |||||||||||||| ||||||||| ||       || | ||||||||||||||||||    
T  44256977 agtatttaatcaagactttttgtcattttaaaaaaatcttaaggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaatcatt 44256878  T
Q  245 caaatttcgaattattgtttaataaattggattt----------tgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 334  Q
    |||||||||||| |||||||||||||||||||||          ||| |||||||| |||||||||||||||||||||||| |||||| |||| ||||||    
T  44256877 caaatttcgaatgattgtttaataaattggatttggatgaattttgttggattttgcagtgtaattttaacaagaaaaagtttttcatcaaaatatgaga 44256778  T
Q  335 tttcttgagattgtttttcttttaaaag 362  Q
    ||| ||||||||||||||||||||||||    
T  44256777 ttttttgagattgtttttcttttaaaag 44256750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 41 - 362
Target Start/End: Original strand, 41827199 - 41827520
Alignment:
Q  41 gatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtt 140  Q
    ||||||||||||||  ||| ||||||||||||||||| |||||||||||       |||||||||||||||| || | ||||||||| ||       ||     
T  41827199 gatgtattggattagaattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagaatttttgcaacttaaaaaaagtc 41827298  T
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| || ||||||||||| ||||||| | ||       |||||||||||||||||||    
T  41827299 ttgtggtattcaatcaagactttttgtcattttaaaaaaatcttgaggtgttcaatcaagacttttcataacttaaaaaaagtcttgtggtattcaaaat 41827398  T
Q  241 cattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
              | |||  ||||||||||||||||||          |||||||||||| |||||||||||||||||||||||| |||||||||||||| ||    
T  41827399 ----------ttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatat 41827488  T
Q  331 gagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||||||||||    
T  41827489 gagatttcttgagattgtttttcttttaaaag 41827520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 41 - 361
Target Start/End: Original strand, 12963587 - 12963911
Alignment:
Q  41 gatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtt 140  Q
    |||||||||||||| ||||||| | |||||||||||| ||||||||||        |||||||||| ||||| || ||| ||||||| ||       ||     
T  12963587 gatgtattggattaggattcta-gagattttaaaagactttttaattacgaaaaagtcttgtggtactcaatcaagactctttgcaacttaaaaaaagtc 12963685  T
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| | ||       |||| ||||||| ||||||    
T  12963686 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagatttttcattacttaaaaaaagtctcgtggtatccaaaat 12963785  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| |||||||  ||||||||||||||  |      ||    
T  12963786 cattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtaagaaaaagtctttttt-----cat 12963880  T
Q  331 gagatttcttgagattgtttttcttttaaaa 361  Q
    |||||||||||||||||||||||||||||||    
T  12963881 gagatttcttgagattgtttttcttttaaaa 12963911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 34 - 352
Target Start/End: Original strand, 973068 - 973397
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagatttttta-attatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    ||||| || |||||||||| ||||||||| ||||||||||||||||||||  || ||       |||||||||||||||| || ||| ||| ||||||      
T  973068 ttaggagggtgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaa 973167  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
         |||||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||        | | ||||||    
T  973168 aaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggta 973267  T
Q  233 ttcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 322  Q
    |||||||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  973268 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcat 973367  T
Q  323 gaaaagatgagatttcttgagattgttttt 352  Q
    ||||| ||||||||||||  ||||||||||    
T  973368 gaaaacatgagatttcttaggattgttttt 973397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 32 - 352
Target Start/End: Original strand, 30440679 - 30441009
Alignment:
Q  32 tcttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttn 131  Q
    |||||||||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||     
T  30440679 tcttaggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaattta 30440778  T
Q  132 nnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggt 231  Q
          || ||||| ||||||||||||| |||||||||||| |||||| |||||  |||||||||||||| | || |||| ||       |||| |||||    
T  30440779 aaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggt 30440878  T
Q  232 attcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 321  Q
    ||||||||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| |||||||  | |||||||||||||     
T  30440879 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagtatgaaaaagtctttcg 30440978  T
Q  322 tgaaaagatgagatttcttgagattgttttt 352  Q
    |||||| ||||||||||||  ||||||||||    
T  30440979 tgaaaacatgagatttcttaggattgttttt 30441009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 141 - 343
Target Start/End: Original strand, 47066688 - 47066881
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggtattcaaaa 239  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |  |||||||| ||        ||||||||||||||||||    
T  47066688 ttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgacgtattcaatcaaaaaatttcatcacttaaaaaaaagtcttgtggtattcaaaa 47066787  T
Q  240 tcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 339  Q
    ||||||||||||||||  |||||||||||||||||||          ||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  47066788 tcattcaaatttcgaaggattgtttaataaattggat----------tttgtagtgtaattttaacaagaaaaaatatttcatgaaaagatgagatttct 47066877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 34 - 352
Target Start/End: Original strand, 12893293 - 12893621
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    |||||||| |||||||||| ||||||||| || |||||||||||||||||  | ||       |||||||||||||||| || ||| ||| ||||||       
T  12893293 ttaggggggtgtattggatcatgattctaaggtattttaaaagatttttttttcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 12893392  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||| ||||||||||||| |||||||||||| ||||||||||||  ||||| |||||||| | || |||| ||       ||||  ||||||    
T  12893393 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtat 12893492  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 323  Q
    ||||||||||||||||||||||  ||||||||||||||          ||||||||||| |||||| ||||| ||||||| || ||||||||||||||||    
T  12893493 tcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatg 12893592  T
Q  324 aaaagatgagatttcttgagattgttttt 352  Q
    |||| ||||||||||||  ||||||||||    
T  12893593 aaaacatgagatttcttaggattgttttt 12893621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 147 - 353
Target Start/End: Original strand, 9179871 - 9180077
Alignment:
Q  147 tattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 246  Q
    ||||||||||||| |||||||||||| |||||||| |||  |||||||||||||| | ||||||| ||       |||||||||||| |||||||| | |    
T  9179871 tattcaatcaagattctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcactta 9179970  T
Q  247 aatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagatt 346  Q
    |||| ||||  |||||||||||||||||||||||||||||||| ||||| | ||||| ||  ||||||||||||||||||| ||||||||||||  ||||    
T  9179971 aattccgaaggattgtttaataaattggattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatttcttaggatt 9180070  T
Q  347 gtttttc 353  Q
    |||||||    
T  9180071 gtttttc 9180077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 43 - 340
Target Start/End: Complemental strand, 43581403 - 43581096
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| |||||||||  | ||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       || ||    
T  43581403 tgtattggatcatgattctaaagaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 43581304  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||    
T  43581303 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 43581204  T
Q  243 ttcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 332  Q
    |||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  43581203 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 43581104  T
Q  333 gatttctt 340  Q
    ||||||||    
T  43581103 gatttctt 43581096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 43 - 352
Target Start/End: Original strand, 47914160 - 47914479
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    ||||||| || ||||||||| |||||||||||||| || || || ||       |||||||||||||||| || ||| ||| ||||||       || ||    
T  47914160 tgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaatactcttttcaattttaaaaaagtctt 47914259  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| ||||||||| ||  |||||||||||||| | || |||| ||       |||| ||| ||||||||||||    
T  47914260 gtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatca 47914359  T
Q  243 ttcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 332  Q
    |||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  47914360 ttcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 47914459  T
Q  333 gatttcttgagattgttttt 352  Q
    |||||||| |||||||||||    
T  47914460 gatttcttaagattgttttt 47914479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 38 - 352
Target Start/End: Complemental strand, 44343714 - 44343390
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||           
T  44343714 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 44343615  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||||| |||||||||||| ||||||||||||   ||||||||||||| | || |||| ||       || | |||||||| ||    
T  44343614 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtatttaa 44343515  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||| |||||    
T  44343514 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaa 44343415  T
Q  328 gatgagatttcttgagattgttttt 352  Q
     ||||||||||||  ||||||||||    
T  44343414 catgagatttcttaggattgttttt 44343390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 38 - 352
Target Start/End: Complemental strand, 40996968 - 40996643
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagatttttta-attatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    |||| |||||||||| ||||||||| |||||||||||| |||||||  || ||       |||||||||||||||| || ||| ||| ||||||          
T  40996968 gggggtgtattggatcatgattctaagggattttaaaatattttttttatcatgaaagagtcttgtggtattcaatcaagactctttccaatttaaaaaa 40996869  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
     || | ||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||  ||       |||| ||||||||||    
T  40996868 agtctcgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattca 40996769  T
Q  237 aaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 326  Q
    |||||||||||||||||||  ||||||||||||||          |||||||||| ||||||| ||||| ||||||| || |||||||||||||||||||    
T  40996768 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 40996669  T
Q  327 agatgagatttcttgagattgttttt 352  Q
    | ||||||||||||  ||||||||||    
T  40996668 acatgagatttcttaggattgttttt 40996643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 48117916 - 48117748
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    ||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||      
T  48117916 cttagggggatgtattggattagtattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaa 48117817  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaaga 201  Q
         || |||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  48117816 aaaaagtcttgtggtattcaatcaagactctttgtcatttttgaaaagtcttgaggtattcaatcaaga 48117748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 38 - 352
Target Start/End: Complemental strand, 18915053 - 18914729
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| |||  |||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||           
T  18915053 gggggtgtattggatcatgtatctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaa 18914954  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||| | |||||||| ||| ||||||||||||  |||||||||||||| | || |||| ||       |||| |||||||||||    
T  18914953 gtcttgtgttattcaatcaaaattctttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 18914854  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||||||| ||   |||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  18914853 aatcattcaaatttcaaaggtttgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 18914754  T
Q  328 gatgagatttcttgagattgttttt 352  Q
     ||||||||||||  ||||||||||    
T  18914753 catgagatttcttaggattgttttt 18914729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 141 - 352
Target Start/End: Complemental strand, 7719475 - 7719254
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||| | | |||||||||| ||||||||||||  |||||||||||||| | || |||| ||        ||| ||||||||||||||    
T  7719475 ttgtgttattcaatcaatattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaat 7719376  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||||||||||||| ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||    
T  7719375 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 7719276  T
Q  331 gagatttcttgagattgttttt 352  Q
    ||||||||||  ||||||||||    
T  7719275 gagatttcttaggattgttttt 7719254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 231 - 352
Target Start/End: Original strand, 19810874 - 19810995
Alignment:
Q  231 tattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| ||||| ||||||| ||  |||| |||||||||||||| ||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaattggattttgtggaattttctagtgaaattttagcataaaaatgtctttcatgaaaacat 19810973  T
Q  331 gagatttcttgagattgttttt 352  Q
    ||||||||||||||||||||||    
T  19810974 gagatttcttgagattgttttt 19810995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 43 - 352
Target Start/End: Original strand, 47879062 - 47879381
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    ||||||| || ||||||||| |||||||||||||| || || || ||       |||||||||||||||| || ||| ||| ||||||       || ||    
T  47879062 tgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaatactcttttcaattttaaaaaagtctt 47879161  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| ||||||||| ||  |||||||||||||| | || |||| ||       |||| ||| ||||||||||||    
T  47879162 gtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatca 47879261  T
Q  243 ttcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 332  Q
    |||||||||  ||  ||||||||||||||          |||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  47879262 ttcaaatttaaaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 47879361  T
Q  333 gatttcttgagattgttttt 352  Q
    |||||||| |||||||||||    
T  47879362 gatttcttaagattgttttt 47879381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 272 - 362
Target Start/End: Complemental strand, 37972941 - 37972851
Alignment:
Q  272 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37972941 tggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagacttcttgagattgtttttcttttaaaag 37972851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 43 - 340
Target Start/End: Complemental strand, 20275576 - 20275269
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || | | ||| ||||||       || ||    
T  20275576 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaataagtcttgtggtattcaatcaagattctttccaatttaaaaaaagtctt 20275477  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    | | ||||||||||||| || ||||||||| |||||||||||   |||||||||||||| | || |||| ||       ||||| |||||||||||||||    
T  20275476 gggttattcaatcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatca 20275377  T
Q  243 ttcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 332  Q
    |||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||| ||||||||  ||||    
T  20275376 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcatga 20275277  T
Q  333 gatttctt 340  Q
    ||||||||    
T  20275276 gatttctt 20275269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 97 - 352
Target Start/End: Original strand, 34695221 - 34695486
Alignment:
Q  97 tcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaat 196  Q
    |||||||||||||||| || ||| ||| ||||||       || ||||| ||||||||||||| || ||||||||| |||||||| |||  |||||||||    
T  34695221 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattccttgtcatttaaaaaaagttttgtggtattcaat 34695320  T
Q  197 caagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggat 286  Q
    ||||| | || |||| ||       |||  ||||||||||||| |||||||||||||||  ||||||||||||||          |||||||||||||||    
T  34695321 caagactcttaatcacttaaaaaaagtccagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggat 34695420  T
Q  287 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 352  Q
    ||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  34695421 tttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 34695486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 140 - 337
Target Start/End: Complemental strand, 44623492 - 44623295
Alignment:
Q  140 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||  ||||| |||||||| | ||||||| ||       |||| ||| |||||||||    
T  44623492 tttgtgatattcaatcaagactctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaa 44623393  T
Q  240 tcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 337  Q
    ||||||| ||||| ||  | |||||||||||||| ||||||||| ||||| ||||| |||||||  | |||||||||| |||| |||| |||| ||||    
T  44623392 tcattcatatttctaaagactgtttaataaattgaattttgtggaattttctagtgaaattttagaatgaaaaagtctctcataaaaatatgatattt 44623295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 228 - 362
Target Start/End: Complemental strand, 43187485 - 43187341
Alignment:
Q  228 tggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtct 317  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||          | ||||||| ||||| |||||||||||||||||||||    
T  43187485 tggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtct 43187386  T
Q  318 ttcatgaaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    |||||||| | ||||||||| ||| ||||||||||||||||||||    
T  43187385 ttcatgaagacatgagattttttgggattgtttttcttttaaaag 43187341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 43 - 327
Target Start/End: Original strand, 727406 - 727691
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| |||||||||  |||||||||| || ||||| || ||       ||||| |||||||||| || ||| ||| ||||||       || ||    
T  727406 tgtattggatcatgattctaatggattttaaatgacttttttatcatgaaaaagtcttgcggtattcaatcaagactcttttcaatttaaaaaaagtctt 727505  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnng-tcttgtggtattcaaaatc 241  Q
    ||| ||||||||||| | |||||||||||| ||||||||||||   ||||||||||| | | || |||| ||         ||| || ||||||||||||    
T  727506 gtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtgatattcaatcaaaactctttatcacttaaaaaaaaatctagtagtattcaaaatc 727605  T
Q  242 attcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||| ||  ||||||||||||||  |||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  727606 attcaaatttcaaaggattgtttaataaatcagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 727691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 169 - 352
Target Start/End: Complemental strand, 7718549 - 7718356
Alignment:
Q  169 attttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaata 268  Q
    |||| ||||||||||||  |||||||||||||| | || |||| ||       |||| |||||||||||||||||||||||||||||  |||||||||||    
T  7718549 atttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaata 7718450  T
Q  269 aat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 352  Q
    |||          |||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||||  ||||||||||    
T  7718449 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgttttt 7718356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 38 - 352
Target Start/End: Original strand, 34008904 - 34009226
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||||||||| || ||       |||   |||||||||| || ||| ||| ||||||           
T  34008904 gggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtct---ggtattcaatcaagactcttttcaatttaaaaaaa 34009000  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtctt-gtggtattca 236  Q
    || ||||| ||||||||||||| | |||||||||| ||||||||||||  |||||||||||| | | || |||| ||       ||| | ||||||||||    
T  34009001 gtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggtattca 34009100  T
Q  237 aaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 326  Q
    |||||||||||||||||||  ||||||||||||||          |||||||||||| ||||| || |  ||||||| ||  ||||||||||||| ||||    
T  34009101 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctaataaaattttagcataaaaaagtctttcaagaaa 34009200  T
Q  327 agatgagatttcttgagattgttttt 352  Q
    | ||||||||||||  ||||||||||    
T  34009201 acatgagatttcttaggattgttttt 34009226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 278
Target Start/End: Complemental strand, 10676635 - 10676498
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||||||| |||||||||||||||  |||| ||||| ||||||  |||||||||||||| ||||||||| ||       ||||  | |||||||||||    
T  10676635 ttgtggtatttaatcaagactctttgcaatttaaaaaaggtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaaat 10676536  T
Q  241 cattcaaatttcgaattattgtttaataaattggattt 278  Q
    |||||||||||||||  |||||||||||||||||||||    
T  10676535 cattcaaatttcgaaggattgtttaataaattggattt 10676498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 141 - 252
Target Start/End: Original strand, 29893066 - 29893177
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||| ||||||||| ||       ||||||| ||||| |||||    
T  29893066 ttgtggtattcaatcaagactctttgtcattttaaaacagtcatgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtagtatttaaaat 29893165  T
Q  241 cattcaaatttc 252  Q
     |||||||||||    
T  29893166 aattcaaatttc 29893177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 141 - 352
Target Start/End: Complemental strand, 39219592 - 39219371
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaa-gtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    |||||||||||||||||||||||||   |||| |||||| ||||||   ||||||||||||| | || |||| ||       ||||  ||||||||||||    
T  39219592 ttgtggtattcaatcaagactctttccaatttaaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaagtctattggtattcaaaa 39219493  T
Q  240 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 329  Q
    |||||||||||| || | ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| |    
T  39219492 tcattcaaattttga-tgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaaca 39219394  T
Q  330 tgagatttcttgagattgttttt 352  Q
    |||||||||||  ||||||||||    
T  39219393 tgagatttcttaggattgttttt 39219371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 227 - 352
Target Start/End: Complemental strand, 32143046 - 32142911
Alignment:
Q  227 gtggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 316  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||    
T  32143046 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 32142947  T
Q  317 tttcatgaaaagatgagatttcttgagattgttttt 352  Q
    || ||| |||| |||||||||||| |||||||||||    
T  32142946 ttccataaaaacatgagatttcttaagattgttttt 32142911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 21067762 - 21067853
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaa 127  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||       |||||||||||||||| || |||||||||||    
T  21067762 agggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 21067853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 195
Target Start/End: Original strand, 509580 - 509737
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||||||||       |||||||||||||||| || ||| ||||  ||||           
T  509580 ggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactatttgtcattttaaaaaa 509679  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaa 195  Q
    || ||| ||||||||||||||||| ||  |||||| ||||||||||||  ||||||||    
T  509680 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 509737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 203
Target Start/End: Original strand, 34695120 - 34695285
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| ||||||| || ||||||||| |||||||||||||| ||||| |||||       |||||||||||||||| || ||| ||| ||||||           
T  34695120 gggggtgtattgaatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 34695219  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatt 203  Q
    || |||||||||||||||||||||||||   |||| ||||||||||||   |||||||||||||||    
T  34695220 gtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 34695285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 291
Target Start/End: Original strand, 25805677 - 25805827
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||| |||||||||||| ||||||| |||| |||||| ||| |  |||||||||||| ||||||||||| ||          ||||||||||||||||    
T  25805677 ttgtggcattcaatcaagattctttgtaatttaaaaaaaatctagtggtattcaatcaaaatttttcatcacttaaaaaaaaatttgtggtattcaaaat 25805776  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 291  Q
    ||||||||||||| |  |||||||||||||||| ||| ||  |||||||||    
T  25805777 cattcaaatttcgtaggattgtttaataaattgaattatgatggattttgt 25805827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 294
Target Start/End: Original strand, 31638760 - 31639020
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||| || ||||||| || ||||||||| | |||||||||||| ||||| || ||       || ||||||||||||| || ||| ||| ||||||       
T  31638760 ttaggagggtgtattgaatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtggtattcaatcaagactcttttcaatttaaa 31638859  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||| ||||||||||| | |||||||||||| |||||| |  ||  |||||| ||||||| | || |||| ||       |||| |||||||    
T  31638860 aaaagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaacttgtgtggtattctatcaagactcttaatcacttaaaaaaagtctagtggtat 31638959  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagt 294  Q
    ||||||||||||||||||||||  ||||||||||||||  |||||||  ||||||| ||||    
T  31638960 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttctagt 31639020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 225 - 280
Target Start/End: Original strand, 447852 - 447907
Alignment:
Q  225 ttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttg 280  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  447852 ttgtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttg 447907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 181
Target Start/End: Complemental strand, 43187663 - 43187518
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||||||||||||    |||||| | |||||||||||| |||||||||||       |||||||||||||||| || ||| |||| |||||         
T  43187663 agggggatgtattggatcgaaattctaagagattttaaaagactttttaattatgaaagagtcttgtggtattcaatcaagactctttgtaatttaaaaa 43187564  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagt 181  Q
      || || ||||||||||| || |||||||||||||||||||||||    
T  43187563 aagtcttatggtattcaattaaaactctttgtcattttaaaaaagt 43187518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 8078284 - 8078448
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||           
T  8078284 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaa 8078383  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaa-agtcttgaagtattcaatcaaga 201  Q
      |||||| ||||||||||||| |||||||||||| ||||| | |||||  ||||||||||||||    
T  8078384 aatttgtgttattcaatcaagattctttgtcatttaaaaaagaatcttgtggtattcaatcaaga 8078448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 192
Target Start/End: Original strand, 29893003 - 29893159
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||| ||||| ||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||| ||||  ||||         
T  29893003 agggggatgtattagattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaa 29893102  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtatt 192  Q
      ||  || ||||||||||||||||| ||  ||| || |||||||||||| ||||||    
T  29893103 cagtcatgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtagtatt 29893159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 36 - 183
Target Start/End: Complemental strand, 10676698 - 10676551
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||||| || ||||| | ||||| |||||||||||||| |||||||||||       |||||||||||| ||| || ||| ||||||||||         
T  10676698 agggggatgtgttagattaggtttctaagggattttaaaagactttttaattatgaaaaaatcttgtggtatttaatcaagactctttgcaatttaaaaa 10676599  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtct 183  Q
      || ||||||||||||||||||||| ||  ||| || ||||||||||    
T  10676598 aggtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtct 10676551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 317
Target Start/End: Original strand, 43679492 - 43679592
Alignment:
Q  227 gtggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 316  Q
    |||||||||||||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||    
T  43679492 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 43679591  T
Q  317 t 317  Q
    |    
T  43679592 t 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 227 - 352
Target Start/End: Original strand, 7113530 - 7113665
Alignment:
Q  227 gtggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 316  Q
    |||||||||||||| |||||||||||| |  ||||||||||||||          | |||||||||||||||| |||   ||||||| || |||||||||    
T  7113530 gtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagtc 7113629  T
Q  317 tttcatgaaaagatgagatttcttgagattgttttt 352  Q
    ||||||||||| |||| |||||||  ||||||||||    
T  7113630 tttcatgaaaacatgaaatttcttaggattgttttt 7113665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 37973091 - 37973007
Alignment:
Q  39 gggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacacttttt 123  Q
    |||||||||||||||| ||||||||| |||||||||| | |||||||||||       |||||||||||||||| || |||||||    
T  37973091 gggatgtattggattaggattctatgagattttaaaatactttttaattatgaaagagtcttgtggtattcaatcaagacttttt 37973007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 280
Target Start/End: Complemental strand, 1470447 - 1470309
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| |||||||| |||||| |||||||||| ||||||||||||   ||||||||  | | ||||||||||||       || ||||||||||||||||    
T  1470447 ttgtgctattcaattaagactatttgtcatttaaaaaaagtcttgtgatattcaatataaacttttcatcattt-aaaaaagtattgtggtattcaaaat 1470349  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttg 280  Q
    | |||||||||  ||  |||||||||| |||| |||||||    
T  1470348 cgttcaaattttaaagcattgtttaatgaattagattttg 1470309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 43679359 - 43679403
Alignment:
Q  39 gggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||    
T  43679359 gggatgtattggatcatgattctaagggattttaaaagatttttt 43679403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 29585439 - 29585490
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    |||||| ||||| |||||||||||| | ||||||||||||||||||||||||    
T  29585439 ggggatttattgaattatgattctacgagattttaaaagattttttaattat 29585490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 362
Target Start/End: Original strand, 32883944 - 32883983
Alignment:
Q  323 gaaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  32883944 gaaaagatgagatttattgagattgtttttcttttaaaag 32883983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 43187600 - 43187557
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 184  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  43187600 ttgtggtattcaatcaagactctttgtaatttaaaaaaagtctt 43187557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 47066630 - 47066677
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    ||||||||||||| ||||||||||||||| |||||| |||||||||||    
T  47066630 atgtattggattaggattctatgggatttaaaaagactttttaattat 47066677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 7113409 - 7113479
Alignment:
Q  144 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcattt 214  Q
    ||||||||||||||||||||||   |||| ||||||||||||   |||||||| ||||||||| |||||||    
T  7113409 tggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaattaagattttttatcattt 7113479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 10616931 - 10617003
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatca 211  Q
    |||||||  |||||||| |||| | ||||||||||| |||||||||||| |||||| ||||||||||| |||||    
T  10616931 gttttgtaatattcaat-aagattatttgtcatttttaaaaagtcttgaggtattcgatcaagattttccatca 10617003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 29893173 - 29893201
Alignment:
Q  334 atttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||||||    
T  29893173 atttcttgagattgtttttcttttaaaag 29893201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 32143176 - 32143132
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttg 185  Q
    ||||| ||||||||||||||||||| | |||| ||||||||||||    
T  32143176 ttgtgatattcaatcaagactctttctaatttaaaaaaagtcttg 32143132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 177; Significance: 3e-95; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 42 - 362
Target Start/End: Original strand, 10452 - 10782
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttt 141  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||       || |    
T  10452 atgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtct 10551  T
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatc 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||        |||||||||||||||||||    
T  10552 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatc 10651  T
Q  242 attcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 331  Q
    ||||||||||| ||  ||||||||||||||          |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10652 attcaaatttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 10751  T
Q  332 agatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||| |||||||||    
T  10752 agatttcttgagattgtttttgttttaaaag 10782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 56 - 362
Target Start/End: Complemental strand, 39918 - 39602
Alignment:
Q  56 gattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatc 155  Q
    ||||||||| ||||||||||||  ||||||||||       |||||||||||||||| || ||||||| ||| ||       ||||||||||||||||||    
T  39918 gattctatgagattttaaaagaccttttaattatgaaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaaagttttgtggtattcaatc 39819  T
Q  156 aagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 255  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||       ||| ||||||||||||||||||||||| ||||||    
T  39818 aagactctttgtcatttttaaaaagtcttgaactattcaatcaagatttttcatcacttaaaaaatgtcatgtggtattcaaaatcattcaaacttcgaa 39719  T
Q  256 ttattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 345  Q
      ||| ||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39718 ggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttcttgagat 39619  T
Q  346 tgtttttcttttaaaag 362  Q
    |||||||||||||||||    
T  39618 tgtttttcttttaaaag 39602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 153; Significance: 5e-81; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 141 - 362
Target Start/End: Original strand, 13873 - 14094
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||| ||       |||||||||||||||||||    
T  13873 ttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 13972  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 340  Q
    |||||||||||| ||  |||||||||||||||||||||||  |||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||    
T  13973 cattcaaatttcaaaagattgtttaataaattggattttgatggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttctt 14072  T
Q  341 gagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||    
T  14073 gagattgtttttcttttaaaag 14094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 195
Target Start/End: Original strand, 13810 - 13969
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||| ||||  ||||         
T  13810 agggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaa 13909  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaa 195  Q
      || ||| ||||||||||||||||| ||  ||| || ||||||||||||  ||||||||    
T  13910 aagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 13969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 153; Significance: 5e-81; HSPs: 3)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 141 - 362
Target Start/End: Complemental strand, 21454 - 21233
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||| ||       |||||||||||||||||||    
T  21454 ttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 21355  T
Q  241 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 340  Q
    |||||||||||| ||  |||||||||||||||||||||||  |||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||    
T  21354 cattcaaatttcaaaagattgtttaataaattggattttgatggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttctt 21255  T
Q  341 gagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||    
T  21254 gagattgtttttcttttaaaag 21233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 262 - 362
Target Start/End: Original strand, 28463 - 28564
Alignment:
Q  262 tttaataaattggattttgtgggattttg-tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaa 360  Q
    |||||||||||||||||||  |||||||| |||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28463 tttaataaattggattttgatggattttggtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaa 28562  T
Q  361 ag 362  Q
    ||    
T  28563 ag 28564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 195
Target Start/End: Complemental strand, 21517 - 21358
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||| ||||  ||||         
T  21517 agggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaa 21418  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaa 195  Q
      || ||| ||||||||||||||||| ||  ||| || ||||||||||||  ||||||||    
T  21417 aagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 21358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 151; Significance: 8e-80; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 37 - 352
Target Start/End: Original strand, 750 - 1075
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    |||| ||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||          
T  750 ggggaatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaattcttgtggtattcaatcaagactttttgcaacttaaaaaa 849  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggtattc 235  Q
     || ||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||| ||||||||| ||        ||||||||||||||    
T  850 agtcttgtggtattcaatcaagactctttgtcattttaaaaaaatcatgaggtattcaatcaagacttttcatcacttaaaaaaaagtcttgtggtattc 949  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaat---------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 326  Q
    ||||||||||||||||||||  ||| ||||||||||         |||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  950 aaaatcattcaaatttcgaagaattatttaataaatagattttgatggattttgtgggattttgtagtgtaattttaactagaaaaagtctttcattaaa 1049  T
Q  327 agatgagatttcttgagattgttttt 352  Q
    | ||||||||||||||||||||||||    
T  1050 atatgagatttcttgagattgttttt 1075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 34 - 280
Target Start/End: Original strand, 4084 - 4330
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| |       |||||||||||||||| || ||||||||||| ||       
T  4084 ttagggggatgtattggattaggattctataggattttaaaagactttttaattttgaaaaagtcttgtggtattcaatcaagactttttgcaaattaaa 4183  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||    
T  4184 aaaagtcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 4283  T
Q  234 tcaaaatcattcaaatttcgaattattgtttaataaattggattttg 280  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  4284 tcaaaatcattcaaattttgaaggattgtttaataaattggattttg 4330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 141 - 362
Target Start/End: Complemental strand, 58292 - 58061
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaaga-tttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    ||||||||||||||||||||| |||| ||  ||||||||||||||  ||||||| |||||| |||||||||| ||       ||  ||||||||||||||    
T  58292 ttgtggtattcaatcaagactttttg-caacttaaaaaagtcttgtggtattcagtcaagactttttcatcacttaaaaaaagttctgtggtattcaaaa 58194  T
Q  240 tcattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 329  Q
    ||||||||||||||||| |||||||||||||||||||||||          |||||||||||||| |||||||||||||| ||| |||||||||||||||    
T  58193 tcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatctttcatgaaaaga 58094  T
Q  330 tgagatttcttgagattgtttttcttttaaaag 362  Q
    |||||||||||||||||||||||||||||||||    
T  58093 tgagatttcttgagattgtttttcttttaaaag 58061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 38 - 127
Target Start/End: Complemental strand, 58353 - 58264
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaa 127  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||||||||       |||||||||||||||| || |||||||||||    
T  58353 ggggatgtattggattaggattccatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 58264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 101; Significance: 6e-50; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 258 - 362
Target Start/End: Original strand, 14878 - 14982
Alignment:
Q  258 attgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttctttt 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14878 attgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattgtttttctttt 14977  T
Q  358 aaaag 362  Q
    |||||    
T  14978 aaaag 14982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 14778 - 14872
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaa 127  Q
    |||| ||||||||||||||||  ||||||||| |||||||||||| |||||||||||       |||||||||||||||| || |||||||||||    
T  14778 cttacggggatgtattggatttggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 14872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 36 - 352
Target Start/End: Complemental strand, 15351 - 15028
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||| |||||||||| ||||||||| |||   |||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||         
T  15351 aggggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaa 15255  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || |||| ||       |||| |||||||||    
T  15254 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 15155  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    ||||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  15154 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 15055  T
Q  326 aagatgagatttcttgagattgttttt 352  Q
    || |||| |||||||  ||||||||||    
T  15054 aacatgaaatttcttaggattgttttt 15028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 36 - 352
Target Start/End: Complemental strand, 15994 - 15671
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||| |||||||||| ||||||||| |||   |||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||         
T  15994 aggggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaa 15898  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || |||| ||       |||| |||||||||    
T  15897 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 15798  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    ||||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  15797 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 15698  T
Q  326 aagatgagatttcttgagattgttttt 352  Q
    || |||| |||||||  ||||||||||    
T  15697 aacatgaaatttcttaggattgttttt 15671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 38 - 340
Target Start/End: Original strand, 100099 - 100411
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||| || |||||||| |||||  ||| ||||||           
T  100099 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttctgatattcaatcaacacactttccaatttaaaaaaa 100198  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||||| |||||||||||| ||||||||||||  ||| |||||||||| | || |||| ||       |||| |||||||||||    
T  100199 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 100298  T
Q  238 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 327  Q
    ||||||||||||||| ||  ||||||||||||||          ||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||    
T  100299 aatcattcaaatttcaaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaa 100398  T
Q  328 gatgagatttctt 340  Q
     ||||||||||||    
T  100399 catgagatttctt 100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 83; Significance: 3e-39; HSPs: 3)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 222 - 349
Target Start/End: Complemental strand, 37042 - 36905
Alignment:
Q  222 gtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaa 311  Q
    |||||| |||||||||||||||| ||||||||||  |||||||||||||||||||||||          |||||||||||||||||||||||||||||||    
T  37042 gtcttgaggtattcaaaatcattaaaatttcgaagcattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 36943  T
Q  312 aagtctttcatgaaaagatgagatttcttgagattgtt 349  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  36942 aagtctttcatgaaaagataagatttcttgagattgtt 36905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 37081 - 37027
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaa 195  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37081 ttgtgctattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 37027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 37133 - 37091
Alignment:
Q  47 ttggattatgattctatgggattttaaaagattttttaattat 89  Q
    |||||||| |||| ||||||||||||||||| |||||||||||    
T  37133 ttggattaggattatatgggattttaaaagactttttaattat 37091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 138 - 352
Target Start/End: Original strand, 102081 - 102307
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaag--tcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
    |||||||| ||||||||||||| |||||||||||| |||||||  |||||  |||||||||||||| | || |||| ||       |||| |||||||||    
T  102081 gttttgtgttattcaatcaagattctttgtcatttaaaaaaagagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 102180  T
Q  236 aaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 325  Q
    ||||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||| ||    
T  102181 aaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaa 102280  T
Q  326 aagatgagatttcttgagattgttttt 352  Q
    || ||||||||||||  ||||||||||    
T  102281 aatatgagatttcttatgattgttttt 102307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 272 - 362
Target Start/End: Complemental strand, 3767 - 3677
Alignment:
Q  272 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaag 362  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | |||| ||||||||||||||||||||||||    
T  3767 tggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaagattatattttttgagattgtttttcttttaaaag 3677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 141 - 352
Target Start/End: Complemental strand, 39111 - 38890
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||||  ||||||||| |||| | || |||| ||       |||| ||| ||||||||||    
T  39111 ttgtggtattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaat 39012  T
Q  241 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 330  Q
    ||||||||||| |||  ||||||||||||||          |||||||||||||||||| ||||| ||||||  || |||||||||||||||||||| ||    
T  39011 cattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacat 38912  T
Q  331 gagatttcttgagattgttttt 352  Q
    |||||| |||  ||||||||||    
T  38911 gagattccttaggattgttttt 38890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 175 - 352
Target Start/End: Complemental strand, 38786 - 38600
Alignment:
Q  175 aaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataa----a 270  Q
    |||||||||||  |||||||||||||| | || |||| ||       |||| |||||||||||||||||||||||||||||  ||||||||||||    |    
T  38786 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataatcaga 38687  T
Q  271 tt-----ggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 352  Q
    ||     ||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  38686 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 38600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 38834 - 38794
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagatttttt 83  Q
    |||||||||| ||||||||| ||||||||||||||| ||||    
T  38834 tgtattggatcatgattctaagggattttaaaagatatttt 38794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 54; Significance: 6e-22; HSPs: 6)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 98 - 208
Target Start/End: Original strand, 233685 - 233795
Alignment:
Q  98 cttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatc 197  Q
    ||||||||||||||| || ||||||||||| ||       || |||||||||||||||||||||||||||||||||||||||||||| | || |||||||    
T  233685 cttgtggtattcaatcaagactttttgcaacttagaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatc 233784  T
Q  198 aagatttttca 208  Q
    || | ||||||    
T  233785 aaaacttttca 233795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 98 - 208
Target Start/End: Original strand, 234533 - 234643
Alignment:
Q  98 cttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatc 197  Q
    ||||||||||||||| || ||||||||||| ||       || |||||||||||||||||||||||||||||||||||||||||||| | || |||||||    
T  234533 cttgtggtattcaatcaagactttttgcaacttagaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatc 234632  T
Q  198 aagatttttca 208  Q
    || | ||||||    
T  234633 aaaacttttca 234643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 98 - 208
Target Start/End: Original strand, 222517 - 222627
Alignment:
Q  98 cttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatc 197  Q
    ||||||||||||||| || ||||||||||| |        || ||||||||||||||||| |||||||||||||||||||||||||| | || |||||||    
T  222517 cttgtggtattcaatcaaaactttttgcaactaagaaaaagtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttaaggtcttcaatc 222616  T
Q  198 aagatttttca 208  Q
    || | ||||||    
T  222617 aaaacttttca 222627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 222469 - 222507
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggatttta 72  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  222469 ttagggggatgtattggattaagattctatgggatttta 222507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 233637 - 233675
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggatttta 72  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  233637 ttagggggatgtattggattaggattctatgggatttta 233675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 234485 - 234523
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggatttta 72  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  234485 ttagggggatgtattggattaggattctatgggatttta 234523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 97 - 357
Target Start/End: Complemental strand, 799 - 529
Alignment:
Q  97 tcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaat 196  Q
    |||||||||||||||| || ||| ||| ||||||       || ||||| ||||||||||||| |||||||||||| |||||||| |||  |||||||||    
T  799 tcttgtggtattcaatcaagactctttacaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtattgtggtattcaat 700  T
Q  197 caagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggat 286  Q
    ||| | | || |||| ||        | | ||||||||||||||||||||||||| |||  ||||||||||||||          |||||||||||| ||    
T  699 caaaactcttaatcacttaaattttttttagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcatattttgatggattttgtggaat 600  T
Q  287 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttctttt 357  Q
    ||| ||||| ||||||   | |||||||||||| | ||||| ||||||||||||  |||| ||||| ||||    
T  599 tttctagtgaaattttggtatgaaaaagtctttgacgaaaacatgagatttcttaggattttttttttttt 529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 181
Target Start/End: Original strand, 8655 - 8793
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||||||||| || ||       | |||||||||||||| || ||||||| ||||||       || ||    
T  8655 tgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaagacttttttcaatttaaaaaaagtctt 8754  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagt 181  Q
    ||| |||| |||||||| |||||||||||| ||||||||    
T  8755 gtgttatttaatcaagattctttgtcatttaaaaaaagt 8793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 12096 - 12041
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    |||| |||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  12096 ttagagggatgtattggattaggattctatgggattttaaaagactttttaattat 12041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 83
Target Start/End: Original strand, 11998 - 12039
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagatttttt 83  Q
    ||||||||||||| |||||||||||||||||||||| |||||    
T  11998 atgtattggattaggattctatgggattttaaaagacttttt 12039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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