View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4020_low_16 (Length: 359)

Name: NF4020_low_16
Description: NF4020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4020_low_16
NF4020_low_16
[»] chr7 (38 HSPs)
chr7 (4-280)||(5792664-5792941)
chr7 (3-325)||(30756764-30757089)
chr7 (4-323)||(37837404-37837726)
chr7 (4-225)||(12141254-12141476)
chr7 (22-325)||(9450101-9450407)
chr7 (4-325)||(42978429-42978755)
chr7 (3-297)||(34899552-34899849)
chr7 (3-308)||(19296716-19297016)
chr7 (22-324)||(48316776-48317081)
chr7 (4-190)||(39328736-39328923)
chr7 (4-225)||(47590233-47590456)
chr7 (4-225)||(39171536-39171760)
chr7 (4-189)||(8001492-8001678)
chr7 (4-184)||(38798745-38798926)
chr7 (3-325)||(13796874-13797201)
chr7 (4-325)||(19404703-19405024)
chr7 (8-225)||(48061345-48061563)
chr7 (8-182)||(45349749-45349924)
chr7 (4-189)||(24770205-24770391)
chr7 (38-190)||(9977186-9977339)
chr7 (4-160)||(46700023-46700180)
chr7 (82-221)||(3267236-3267377)
chr7 (137-295)||(40993032-40993193)
chr7 (4-221)||(25287132-25287351)
chr7 (249-325)||(1749334-1749411)
chr7 (31-102)||(28062196-28062267)
chr7 (22-76)||(4999993-5000047)
chr7 (299-341)||(5792620-5792662)
chr7 (116-221)||(4530005-4530108)
chr7 (244-325)||(35132772-35132855)
chr7 (8-102)||(28044706-28044800)
chr7 (22-112)||(38880542-38880632)
chr7 (31-112)||(35132984-35133065)
chr7 (22-62)||(1769142-1769182)
chr7 (36-112)||(5348570-5348646)
chr7 (265-297)||(26610952-26610984)
chr7 (138-190)||(27997046-27997098)
chr7 (132-221)||(28476146-28476236)
[»] chr4 (45 HSPs)
chr4 (3-325)||(22611023-22611347)
chr4 (31-297)||(54021728-54021996)
chr4 (3-325)||(53810867-53811192)
chr4 (3-325)||(19853457-19853781)
chr4 (8-325)||(2520616-2520938)
chr4 (8-325)||(21686192-21686510)
chr4 (3-323)||(32766355-32766678)
chr4 (4-225)||(43095570-43095791)
chr4 (36-297)||(10258874-10259136)
chr4 (3-325)||(4142697-4143024)
chr4 (25-225)||(17949291-17949493)
chr4 (25-225)||(17953143-17953345)
chr4 (26-225)||(13634055-13634256)
chr4 (4-190)||(8670461-8670648)
chr4 (4-190)||(53444094-53444281)
chr4 (4-190)||(56156588-56156775)
chr4 (13-190)||(9178329-9178507)
chr4 (4-225)||(56040592-56040813)
chr4 (4-225)||(26633617-26633840)
chr4 (3-297)||(43510066-43510360)
chr4 (4-221)||(33920995-33921217)
chr4 (8-297)||(10496209-10496494)
chr4 (4-182)||(24099013-24099192)
chr4 (4-294)||(35348176-35348470)
chr4 (72-225)||(5119279-5119434)
chr4 (4-134)||(21662469-21662600)
chr4 (4-134)||(21671233-21671364)
chr4 (4-225)||(26090860-26091083)
chr4 (114-225)||(29120420-29120532)
chr4 (51-225)||(40066048-40066224)
chr4 (115-223)||(11300049-11300159)
chr4 (31-221)||(37030207-37030397)
chr4 (265-323)||(22300686-22300745)
chr4 (152-297)||(45418393-45418540)
chr4 (265-325)||(36204590-36204650)
chr4 (249-325)||(22038991-22039068)
chr4 (25-62)||(36204346-36204383)
chr4 (1-62)||(36700381-36700442)
chr4 (22-165)||(51888175-51888322)
chr4 (280-325)||(51888441-51888486)
chr4 (254-299)||(52978689-52978734)
chr4 (243-325)||(22558651-22558735)
chr4 (241-297)||(24099254-24099313)
chr4 (267-322)||(47320612-47320668)
chr4 (22-62)||(52944416-52944456)
[»] chr8 (43 HSPs)
chr8 (1-297)||(14544844-14545143)
chr8 (36-316)||(28897541-28897822)
chr8 (22-325)||(27110427-27110732)
chr8 (4-297)||(7883185-7883480)
chr8 (4-225)||(23230566-23230788)
chr8 (1-293)||(40619014-40619307)
chr8 (4-189)||(37971242-37971428)
chr8 (3-325)||(3673267-3673587)
chr8 (4-225)||(45445755-45445979)
chr8 (3-190)||(10377647-10377835)
chr8 (4-222)||(7677227-7677445)
chr8 (4-182)||(17693558-17693737)
chr8 (4-190)||(20553185-20553372)
chr8 (4-187)||(16247167-16247351)
chr8 (1-221)||(24186602-24186822)
chr8 (4-190)||(20559688-20559875)
chr8 (4-190)||(20571250-20571437)
chr8 (3-141)||(31013551-31013690)
chr8 (4-190)||(25191009-25191198)
chr8 (5-190)||(40211247-40211433)
chr8 (31-190)||(28086784-28086944)
chr8 (4-135)||(33214615-33214747)
chr8 (51-225)||(36948428-36948605)
chr8 (4-97)||(16928701-16928794)
chr8 (56-225)||(44091749-44091915)
chr8 (265-320)||(14916344-14916399)
chr8 (4-161)||(9637353-9637511)
chr8 (85-221)||(27498389-27498527)
chr8 (31-161)||(29617245-29617379)
chr8 (265-322)||(8981021-8981079)
chr8 (241-325)||(31013753-31013839)
chr8 (244-322)||(15344130-15344210)
chr8 (244-322)||(15433195-15433275)
chr8 (244-322)||(15524499-15524579)
chr8 (250-325)||(17693805-17693881)
chr8 (265-325)||(24099469-24099528)
chr8 (31-221)||(18890670-18890869)
chr8 (241-297)||(37971141-37971199)
chr8 (241-297)||(29937964-29938021)
chr8 (22-62)||(7198157-7198197)
chr8 (22-62)||(39657541-39657581)
chr8 (78-161)||(41684412-41684496)
chr8 (22-62)||(43833958-43833998)
[»] chr2 (52 HSPs)
chr2 (4-325)||(8809111-8809433)
chr2 (4-225)||(31128727-31128949)
chr2 (3-325)||(9169204-9169527)
chr2 (3-325)||(27097353-27097675)
chr2 (3-297)||(38445024-38445320)
chr2 (3-325)||(7646301-7646632)
chr2 (4-190)||(1415523-1415710)
chr2 (3-224)||(7448178-7448401)
chr2 (3-325)||(4778582-4778907)
chr2 (4-190)||(18763434-18763621)
chr2 (5-325)||(36943069-36943394)
chr2 (1-225)||(29279514-29279740)
chr2 (1-225)||(35220256-35220481)
chr2 (3-225)||(19062298-19062522)
chr2 (8-225)||(31210558-31210777)
chr2 (4-190)||(33923671-33923858)
chr2 (22-225)||(7677838-7678041)
chr2 (1-297)||(17994674-17994958)
chr2 (8-225)||(1421605-1421825)
chr2 (80-325)||(4098932-4099180)
chr2 (36-224)||(25509047-25509233)
chr2 (4-225)||(4904092-4904315)
chr2 (36-206)||(19028893-19029064)
chr2 (4-308)||(43397065-43397372)
chr2 (1-189)||(37876550-37876739)
chr2 (8-220)||(36691808-36692023)
chr2 (31-324)||(11833314-11833603)
chr2 (4-221)||(31788390-31788609)
chr2 (12-225)||(4041549-4041764)
chr2 (4-221)||(5427816-5428033)
chr2 (81-225)||(11985254-11985400)
chr2 (22-190)||(30400000-30400169)
chr2 (4-225)||(29173667-29173889)
chr2 (31-162)||(42698675-42698807)
chr2 (3-145)||(33585681-33585824)
chr2 (36-225)||(39310831-39311022)
chr2 (4-97)||(12677397-12677490)
chr2 (265-325)||(37994104-37994164)
chr2 (36-141)||(28871767-28871873)
chr2 (38-112)||(36175477-36175551)
chr2 (42-154)||(6436609-6436722)
chr2 (36-101)||(14423381-14423446)
chr2 (22-145)||(17151434-17151558)
chr2 (265-323)||(29574842-29574901)
chr2 (265-319)||(32448830-32448885)
chr2 (266-325)||(36175652-36175711)
chr2 (22-112)||(10237181-10237271)
chr2 (241-325)||(12648109-12648194)
chr2 (22-62)||(10929760-10929800)
chr2 (8-112)||(24461488-24461592)
chr2 (22-62)||(29574593-29574633)
chr2 (251-323)||(30400232-30400307)
[»] chr1 (44 HSPs)
chr1 (44-325)||(27456362-27456646)
chr1 (4-225)||(31918912-31919134)
chr1 (4-323)||(5983660-5983982)
chr1 (8-325)||(7337613-7337933)
chr1 (4-225)||(23291588-23291812)
chr1 (4-308)||(45415398-45415704)
chr1 (7-225)||(1742203-1742424)
chr1 (4-189)||(7836742-7836928)
chr1 (3-330)||(32394816-32395145)
chr1 (3-225)||(21947563-21947787)
chr1 (10-189)||(44915599-44915779)
chr1 (22-325)||(34878242-34878541)
chr1 (4-325)||(10776407-10776730)
chr1 (4-225)||(14872563-14872785)
chr1 (4-190)||(21686832-21687019)
chr1 (8-225)||(35484341-35484560)
chr1 (4-225)||(27580074-27580296)
chr1 (12-189)||(51916619-51916793)
chr1 (22-225)||(8211875-8212079)
chr1 (4-225)||(13144758-13144981)
chr1 (72-225)||(11462462-11462616)
chr1 (89-225)||(940287-940424)
chr1 (31-159)||(3228259-3228388)
chr1 (70-190)||(50377287-50377408)
chr1 (72-297)||(31984030-31984251)
chr1 (4-96)||(26535403-26535495)
chr1 (3-225)||(35461994-35462206)
chr1 (78-221)||(15434895-15435038)
chr1 (4-96)||(18939373-18939465)
chr1 (8-96)||(49504545-49504633)
chr1 (244-322)||(49626735-49626815)
chr1 (124-225)||(39888115-39888217)
chr1 (249-325)||(21686695-21686772)
chr1 (251-313)||(27580322-27580385)
chr1 (37-96)||(39888236-39888295)
chr1 (25-112)||(41994465-41994552)
chr1 (22-76)||(24597288-24597342)
chr1 (4-62)||(31984249-31984307)
chr1 (22-75)||(15431630-15431683)
chr1 (121-225)||(15836115-15836220)
chr1 (280-325)||(32679324-32679369)
chr1 (121-225)||(34479414-34479519)
chr1 (36-101)||(49626962-49627027)
chr1 (22-62)||(25564086-25564126)
[»] chr3 (66 HSPs)
chr3 (22-325)||(35864896-35865203)
chr3 (3-325)||(9998285-9998610)
chr3 (3-325)||(10229293-10229619)
chr3 (3-325)||(10232889-10233213)
chr3 (4-294)||(6954642-6954935)
chr3 (4-221)||(20987745-20987964)
chr3 (3-325)||(10108057-10108379)
chr3 (11-297)||(36461384-36461673)
chr3 (8-225)||(12149734-12149953)
chr3 (31-297)||(23799883-23800151)
chr3 (3-325)||(48650679-48651005)
chr3 (3-295)||(52923062-52923355)
chr3 (4-212)||(53099723-53099932)
chr3 (22-325)||(45568409-45568714)
chr3 (8-189)||(20608849-20609031)
chr3 (4-225)||(40487244-40487467)
chr3 (3-325)||(21431444-21431756)
chr3 (4-190)||(38545754-38545941)
chr3 (8-293)||(43488540-43488827)
chr3 (5-308)||(54148824-54149132)
chr3 (4-225)||(12050594-12050816)
chr3 (4-225)||(21533755-21533978)
chr3 (3-211)||(32701426-32701634)
chr3 (3-325)||(40556530-40556845)
chr3 (1-221)||(20464913-20465135)
chr3 (5-189)||(45425548-45425733)
chr3 (4-225)||(18010938-18011162)
chr3 (8-163)||(33579862-33580018)
chr3 (4-190)||(47041994-47042182)
chr3 (4-161)||(21313020-21313178)
chr3 (4-220)||(43016780-43016997)
chr3 (22-225)||(47896071-47896276)
chr3 (22-297)||(9797498-9797772)
chr3 (70-195)||(46220630-46220746)
chr3 (79-225)||(38860141-38860288)
chr3 (3-135)||(7448859-7448992)
chr3 (3-135)||(7457001-7457134)
chr3 (4-190)||(37040724-37040911)
chr3 (116-225)||(9319976-9320086)
chr3 (22-224)||(19339095-19339300)
chr3 (243-325)||(4821626-4821710)
chr3 (4-112)||(48199811-48199919)
chr3 (5-134)||(45424809-45424939)
chr3 (4-112)||(46304466-46304574)
chr3 (251-325)||(29239158-29239232)
chr3 (22-224)||(31271773-31271975)
chr3 (116-225)||(36910700-36910810)
chr3 (22-217)||(14859416-14859614)
chr3 (51-133)||(26275812-26275895)
chr3 (115-225)||(44960010-44960121)
chr3 (266-322)||(50194493-50194550)
chr3 (251-325)||(20609091-20609167)
chr3 (267-325)||(29921871-29921931)
chr3 (267-325)||(29971024-29971084)
chr3 (243-325)||(51303825-51303908)
chr3 (52-225)||(1649339-1649513)
chr3 (243-304)||(46220519-46220581)
chr3 (5-62)||(36734621-36734678)
chr3 (36-101)||(53807836-53807901)
chr3 (241-323)||(7449086-7449170)
chr3 (241-323)||(7457228-7457312)
chr3 (4-76)||(19619784-19619855)
chr3 (265-325)||(20465177-20465237)
chr3 (268-323)||(42460567-42460623)
chr3 (22-62)||(51923811-51923851)
chr3 (265-297)||(53508069-53508101)
[»] chr6 (30 HSPs)
chr6 (3-325)||(33053113-33053438)
chr6 (3-325)||(606024-606349)
chr6 (3-325)||(23128438-23128763)
chr6 (8-225)||(127591-127809)
chr6 (8-225)||(3913524-3913743)
chr6 (4-225)||(34018481-34018704)
chr6 (4-300)||(30608461-30608757)
chr6 (4-225)||(7515148-7515370)
chr6 (4-182)||(3355082-3355261)
chr6 (3-325)||(67946-68270)
chr6 (22-225)||(32327181-32327386)
chr6 (3-190)||(29319823-29320011)
chr6 (4-163)||(29255392-29255551)
chr6 (8-141)||(12170474-12170608)
chr6 (38-145)||(30894602-30894710)
chr6 (159-325)||(12170315-12170483)
chr6 (50-112)||(11321461-11321523)
chr6 (21-162)||(24227695-24227837)
chr6 (274-323)||(28981001-28981050)
chr6 (4-100)||(4010458-4010553)
chr6 (244-325)||(545845-545927)
chr6 (267-325)||(7976376-7976434)
chr6 (241-325)||(29320046-29320132)
chr6 (22-112)||(30493568-30493658)
chr6 (26-62)||(1933660-1933696)
chr6 (121-165)||(20220860-20220904)
chr6 (121-165)||(22114844-22114888)
chr6 (132-217)||(30776594-30776680)
chr6 (1-65)||(31852136-31852200)
chr6 (122-162)||(32059894-32059934)
[»] chr5 (34 HSPs)
chr5 (3-325)||(13007047-13007372)
chr5 (3-325)||(9113670-9113995)
chr5 (4-325)||(38597616-38597939)
chr5 (50-325)||(26825247-26825526)
chr5 (4-225)||(11976881-11977106)
chr5 (1-225)||(6216818-6217043)
chr5 (22-221)||(24229748-24229950)
chr5 (3-325)||(6012083-6012408)
chr5 (4-225)||(14726407-14726631)
chr5 (36-222)||(41630424-41630612)
chr5 (4-190)||(35850754-35850941)
chr5 (8-225)||(38007275-38007496)
chr5 (70-295)||(11867529-11867744)
chr5 (3-145)||(34945393-34945536)
chr5 (22-225)||(25980077-25980282)
chr5 (22-325)||(7036046-7036343)
chr5 (38-225)||(11073880-11074069)
chr5 (4-325)||(31391699-31392027)
chr5 (36-297)||(8096475-8096738)
chr5 (4-161)||(13421917-13422075)
chr5 (1-225)||(15571405-15571631)
chr5 (22-165)||(7930157-7930301)
chr5 (4-154)||(10722752-10722903)
chr5 (175-325)||(34945240-34945391)
chr5 (4-135)||(26878054-26878186)
chr5 (124-225)||(14082440-14082539)
chr5 (241-325)||(26878263-26878348)
chr5 (252-297)||(41630352-41630397)
chr5 (51-111)||(1409533-1409593)
chr5 (244-325)||(2979499-2979582)
chr5 (22-62)||(14211311-14211351)
chr5 (249-297)||(14664219-14664267)
chr5 (241-308)||(35850620-35850688)
chr5 (22-62)||(35920960-35921000)
[»] scaffold0017 (1 HSPs)
scaffold0017 (4-225)||(32693-32917)
[»] scaffold0634 (1 HSPs)
scaffold0634 (8-225)||(8432-8651)
[»] scaffold0445 (1 HSPs)
scaffold0445 (8-325)||(1163-1483)
[»] scaffold0127 (1 HSPs)
scaffold0127 (4-325)||(15311-15635)
[»] scaffold0136 (2 HSPs)
scaffold0136 (31-225)||(10015-10210)
scaffold0136 (31-225)||(37966-38169)
[»] scaffold0121 (1 HSPs)
scaffold0121 (4-222)||(31220-31436)
[»] scaffold0262 (1 HSPs)
scaffold0262 (4-294)||(1765-2056)
[»] scaffold0026 (1 HSPs)
scaffold0026 (22-325)||(71828-72134)
[»] scaffold0884 (1 HSPs)
scaffold0884 (8-220)||(1923-2136)
[»] scaffold0088 (1 HSPs)
scaffold0088 (3-325)||(50605-50920)
[»] scaffold0049 (2 HSPs)
scaffold0049 (22-190)||(71264-71433)
scaffold0049 (241-306)||(71469-71533)
[»] scaffold0128 (1 HSPs)
scaffold0128 (22-225)||(36750-36950)
[»] scaffold0618 (1 HSPs)
scaffold0618 (56-225)||(7995-8161)
[»] scaffold0603 (2 HSPs)
scaffold0603 (22-225)||(7635-7841)
scaffold0603 (267-325)||(7536-7595)
[»] scaffold0050 (1 HSPs)
scaffold0050 (4-189)||(65988-66174)
[»] scaffold0009 (1 HSPs)
scaffold0009 (265-319)||(58288-58343)
[»] scaffold0064 (1 HSPs)
scaffold0064 (265-325)||(19246-19306)


Alignment Details
Target: chr7 (Bit Score: 162; Significance: 2e-86; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 4 - 280
Target Start/End: Complemental strand, 5792941 - 5792664
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  5792941 taagtcatcgaaattcttatgcttccagatctgcaacgttgacgtccaaatcattgatttaacttgtaattgactgatgtcgatctttcaataggaacta 5792842  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaa 202  Q
     |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| | | ||||||| ||| ||||||||||||||||| || |||    
T  5792841 aacgaacactgtgacaagacgcgaaatcaaacgtcgcacaagatgactaacaacacaacactgcaattagacgacaaaataacaaaaacacaacaaaaaa 5792742  T
Q  203 aactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtca 280  Q
    ||||| ||||||||||||||||        |||| || ||||||||| |||||||||||||  ||||||||||||||||    
T  5792741 aactcaatatatgtgaaaacca-tttttttagaatgaaagaaaagagaaaaaaagatgtagaggggtgattttaggtca 5792664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 325
Target Start/End: Original strand, 30756764 - 30757089
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| || |||||||| |||| |||||||||| |||||||| |||| || || || ||||||| |||||| ||||||||||||| ||||    
T  30756764 ttaagtcaccgaaatactcatgcttccggatctgcaacgttgatgtccaaattattggttgaatttgtaattgactgatgtagatctttcaatagaaact 30756863  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
      || |||| || ||||||||||||||||||||| ||||||||| ||| ||||||||||||||| | ||||| |||||||| || |||||||||| | ||    
T  30756864 gaacaaacaccgcgacaaaacgcgaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaacacaaaagga 30756963  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccat 298  Q
    |||||  |||| ||||||||| |||       |||  || ||||||| |||||||||||||||  |||||||| |||||| |||||| |||||||||||     
T  30756964 aaaacatgatagatgtgaaaatcac-ttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaattacctaaaaccac 30757062  T
Q  299 cccttctcgacgaatgaaagagaaaga 325  Q
    |||| ||||| ||| ||||||||||||    
T  30757063 ccctcctcgatgaacgaaagagaaaga 30757089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 4 - 323
Target Start/End: Original strand, 37837404 - 37837726
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||||||||||  |||||||| |||| |||||||||||| ||||||||||| || || || ||||||| ||||||||||||||||||||||||||    
T  37837404 taagtcaccgaaattcacatgcttccggatctgcaacgttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcaataggaacta 37837503  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac--aaaaacacaataaga 200  Q
     ||||||| || ||||| |||| |||||||||| ||||||||| ||| ||||||||||||||| | |||||||| ||||| ||  |||||||||| |  |    
T  37837504 aacgaacaccgcgacaagacgcaaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagatgatgaaatcacaaaaaaacacaaaagaa 37837603  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccat 298  Q
    ||||||  ||||||||| |||||||       |||  || ||||||| |||||||||||||||  |||||||| |||||| ||||||||||||||||||     
T  37837604 aaaacttaatatatgtgtaaaccac-ttatttagattgaaagaaaag-ggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 37837701  T
Q  299 cccttctcgacgaatgaaagagaaa 323  Q
    |||| ||| | ||| ||| ||||||    
T  37837702 ccctcctcaatgaacgaaggagaaa 37837726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 12141254 - 12141476
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  |||||||| |||| |||||||||||||||||||||||| || || || ||||||| |||||| |||||| ||||||||||||    
T  12141254 taagtcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgactgatgtagatcttccaataggaacta 12141353  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaa 202  Q
     || ||||| ||||||| ||||||||||||| | ||||||||| ||| ||||||| ||||||| | ||||| |||||||| |||||||||||| |  |||    
T  12141354 aacaaacaccgtgacaagacgcgaaatcaaatgccgcacaagacgacaaacaacaaaacgccgcacttagacgacgaaatcacaaaaacacaaaagaaaa 12141453  T
Q  203 aactcgatatatgtgaaaaccac 225  Q
    |||| |||| |||||||||||||    
T  12141454 aacttgatagatgtgaaaaccac 12141476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 22 - 325
Target Start/End: Original strand, 9450101 - 9450407
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaa 120  Q
    |||||||| |||| |||||||||||||||||||||||| || || || ||||||| |||||| ||||||||||||||||||  || |||| || ||||||    
T  9450101 atgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttgtaattgattgatgtagatctttcaataggaactgaacaaacaccgcgacaaa 9450200  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaactcgatatatgtgaa 219  Q
    | ||||||||||||| ||||||||| ||| ||||||||||||||  | ||||| |||||||| || |||||||||| | || ||||| |||| |||||||    
T  9450201 atgcgaaatcaaacgccgcacaagacgacgaacaacacaacgccacacttagacgacgaaatcacaaaaaacacaaaaggagaaactagatagatgtgaa 9450300  T
Q  220 aaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccatcccttctcgacgaatgaaa 317  Q
    || |||       |||  || ||||||| ||||| |||||||||  |||||||| |||||| ||||||||||||||||||||||| ||||| ||| |||     
T  9450301 aatcac-ttatttagattgaaagaaaaggggaaacaagatgtagatgggtgattctaggtcaaaaaatgacctaaaaccatccctcctcgatgaacgaag 9450399  T
Q  318 gagaaaga 325  Q
    ||||||||    
T  9450400 gagaaaga 9450407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 325
Target Start/End: Complemental strand, 42978755 - 42978429
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  || ||||| |||| |||||||||||| ||||||||||| || || || | ||||| ||||||||||||||||||| ||||||    
T  42978755 taagtcaccgaaatacccatccttccggatctgcaacgttgacgcccaaatcattggttgaatttgttattgactgatgtcgatctttcaataagaacta 42978656  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaa--aacacaataaga 200  Q
     ||||||| || || |||||| ||||||||||| ||||||||| ||| ||||||||||||||| | ||||| |||||||| |||||  ||||||| | ||    
T  42978655 aacgaacaccgcgataaaacgagaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaagaacacaaaagga 42978556  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagagga-aaaaagatgtagcg-ggtgattttaggtc-aaaaatgacctaaaacca 297  Q
    ||||||  |||||||||||||||||       |||  ||  |||||| ||| |||||||||||| | ||||||| |||||| ||||||||||||||||||    
T  42978555 aaaactttatatatgtgaaaaccac-ttatttagattgatcgaaaaggggagaaaaagatgtagagtggtgattctaggtcaaaaaatgacctaaaacca 42978457  T
Q  298 tcccttctcgacgaatgaaagagaaaga 325  Q
     |||| ||||| ||| ||| ||||||||    
T  42978456 cccctcctcgatgaacgaaggagaaaga 42978429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 3 - 297
Target Start/End: Original strand, 34899552 - 34899849
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| |  ||||||||  ||  |||||||||||||||||||||||| || || || ||||||| |||||| |||||||||| |||||||    
T  34899552 ttaagtcaccgaaatacccatgcttccgaatttgcaacgttgacgtccaaatcattggttgaatttgtaattgactgatgtagatctttcaagaggaact 34899651  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
      || |||| || ||||||| ||||||||||||| ||||||||| ||| ||||||||||||||| | ||||| |||||||| || |||||||||| | ||    
T  34899652 gaacaaacaccgcgacaaaaagcgaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaacacaaaagga 34899751  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaacca 297  Q
    |||||| |||| |||||||||||||       |||  || ||||||| | |||||||||||||  |||||||| |||||| ||||||||||||||||||    
T  34899752 aaaacttgatagatgtgaaaaccac-ttatttagattgaaagaaaagggaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaacca 34899849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 3 - 308
Target Start/End: Complemental strand, 19297016 - 19296716
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    |||||| |||||||| |  |||||||| |||| |||||||||||||||||||||||| || || || ||||||| |||||| |||||||||| |||||||    
T  19297016 ttaagttaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgactgatgtagatctttcaagaggaact 19296917  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
      || |||| || ||||||| ||||||||||||| ||||||||| ||| ||||||||||||||| | ||||| |||||||| || |||||||||| | ||    
T  19296916 gaacaaacaccgcgacaaaatgcgaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaacacaaaagga 19296817  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccat 298  Q
    |||||| |||| ||||||||            |||  || ||||||| |||||||||||||||  |||||||| |||||| ||||||||||||||||||     
T  19296816 aaaacttgatagatgtgaaa---------tttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 19296726  T
Q  299 cccttctcga 308  Q
    |||| |||||    
T  19296725 ccctcctcga 19296716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 22 - 324
Target Start/End: Original strand, 48316776 - 48317081
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaa 120  Q
    |||||||| |||| ||| |||||||||||||||||||| || || || ||||||| |||||| ||||||||||||||||||  || |||| || |||||     
T  48316776 atgcttccggatctgcagcgttgacgtccaaatcattgcttgaatttgtaattgattgatgtagatctttcaataggaactgaacaaacaccgcgacaag 48316875  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaactcgatatatgtgaa 219  Q
    |||||||||||||||  |||||||| ||| ||||||||||||||||| ||||| |||||||| || |||||||||| |  ||||| | |||| |||||||    
T  48316876 acgcgaaatcaaacgctgcacaagacgacgaacaacacaacgccgtacttagacgacgaaatcacaaaaaacacaaaagaaaaaatttgatagatgtgaa 48316975  T
Q  220 aaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggt-caaaaatgacctaaaaccatcccttctcgacgaatgaaa 317  Q
    ||||||       | |  || ||||||| || ||||||||||||  |||||||| ||||| ||||||||||||||||||| |||| || || ||| |||     
T  48316976 aaccacttatttaa-attgaaagaaaagggggaaaaagatgtagaggggtgattctaggtccaaaaatgacctaaaaccacccctccttgatgaacgaag 48317074  T
Q  318 gagaaag 324  Q
    |||||||    
T  48317075 gagaaag 48317081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 39328736 - 39328923
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||||| ||||  |||||| | ||||  ||||||||||| ||||||||||| || || || ||||||| ||||| ||||||||||||||||| ||    
T  39328736 taagtcaccgagattcacatgctttcggatcttcaacgttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaataggaaata 39328835  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
     || ||||| | ||||||||||||||||||||| ||||||||| ||| ||||||||||||||||| ||||| |||||||| |||||||    
T  39328836 aacaaacaccgcgacaaaacgcgaaatcaaacgccgcacaagacgacgaacaacacaacgccgtacttagacgacgaaatcacaaaaa 39328923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 4 - 225
Target Start/End: Complemental strand, 47590456 - 47590233
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||| ||||||| || |||||||| |||  |||||||||||| ||||||||||| || || || |||||||  ||||| |||||||||||||||| ||    
T  47590456 taagtcgccgaaatactcatgcttccggatgtgcaacgttgacgcccaaatcattggttgaatttgtaattgacggatgtagatctttcaataggaatta 47590357  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaa 201  Q
    ||| |||| || | ||| |||| |||||||||| ||||||||| ||| ||||||||||||||| | |||||  ||||||| || |||||||||| | |||    
T  47590356 tacaaacaccgcggcaagacgcaaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacaacgaaatcacaaaaaacacaaaaggaa 47590257  T
Q  202 aaactcgatatatgtgaaaaccac 225  Q
    ||||| ||||||||||||||||||    
T  47590256 aaacttgatatatgtgaaaaccac 47590233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 39171536 - 39171760
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  |||||||| |||| |||||||||||||||||||||||| || || || ||||||| |||||| ||||||||||| ||||||     
T  39171536 taagtcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttgtaattgattgatgtagatctttcaattggaactg 39171635  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac--aaaaacacaataaga 200  Q
     || |||| |||||||| |||  ||||||||||  |||||||| ||| ||||||| ||||| | | |||||||||||||| ||  |||||||||| | ||    
T  39171636 aacaaacatcgtgacaagacgtaaaatcaaacgctgcacaagacgacgaacaacaaaacgcagcacttagatgacgaaatcacaaaaaaacacaaaagga 39171735  T
Q  201 aaaactcgatatatgtgaaaaccac 225  Q
    |||||| |||| || ||||||||||    
T  39171736 aaaacttgatagatatgaaaaccac 39171760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 8001492 - 8001678
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| || ||| ||||  ||| |||||||||||||||||||||||| || || || ||||||| |||||| ||||||||||||||||||     
T  8001492 taagtcaccgaaatactcatgattccgaatctgcaacgttgacgtccaaatcattgcttgaatttgtaattgattgatgtagatctttcaataggaactg 8001591  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaa 189  Q
     || |||| |  ||||| ||||||||||||||| ||||||||| ||| ||||||| ||||||| | ||||| |||||||| ||||||    
T  8001592 aacaaacaccacgacaagacgcgaaatcaaacgccgcacaagacgacgaacaacaaaacgccgcacttagacgacgaaatcacaaaa 8001678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 4 - 184
Target Start/End: Complemental strand, 38798926 - 38798745
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||||||||||  |||||||| ||||  ||| ||||||| ||||||||||| || || || ||||||| ||||| ||||||||||||||||| ||    
T  38798926 taagtcaccgaaattcacatgcttccggatcttcaatgttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaataggaaata 38798827  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataa 184  Q
     || ||||| | |||||||||| |||||||||| ||||||||| ||| |||||||||||| |||| ||||| ||| ||||||    
T  38798826 aacaaacactgcgacaaaacgcaaaatcaaacgccgcacaagacgacgaacaacacaacgtcgtacttagacgacaaaataa 38798745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 3 - 325
Target Start/End: Original strand, 13796874 - 13797201
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    |||||||||| |||| || |||||||| |||| ||||||||||||  |||||||||| || |  || | ||||| ||||||||||||||||||| |||||    
T  13796874 ttaagtcacctaaatactcatgcttccggatctgcaacgttgacggtcaaatcattggttgactttgttattgactgatgtcgatctttcaatatgaact 13796973  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagat---gactaacaacacaacgccgtaattagatgacgaaat-aacaaaaacacaata 197  Q
    | ||||||| || ||||| || |||||||||||||||||||||||    || ||||||||||||||| | ||||| |||||||| |  |||||||||| |    
T  13796974 aaacgaacaccgagacaagacacgaaatcaaacgtcgcacaagatcacaacgaacaacacaacgccgcacttagacgacgaaatcataaaaaacacaaaa 13797073  T
Q  198 agaaaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttagg-tcaaaaatgacctaaaac 295  Q
     |||||||| |||| |||| |||| |||       | |  || ||||||| || ||||||||||||  |||||||| |||| | ||||||||||||||||    
T  13797074 ggaaaaacttgatagatgttaaaatcacttatttaa-attgaaagaaaag-gggaaaaagatgtagaggggtgattctaggttaaaaaatgacctaaaac 13797171  T
Q  296 catcccttctcgacgaatgaaagagaaaga 325  Q
    ||||| | ||||| ||| ||| ||||||||    
T  13797172 catccatcctcgatgaacgaacgagaaaga 13797201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 325
Target Start/End: Original strand, 19404703 - 19405024
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||| ||||| || |||||||| |||| ||||| |||||| |||||||||||||| || || |||||||  |||||| ||||||||| ||||||||    
T  19404703 taagtcactgaaatactcatgcttccggatctgcaacattgacgcccaaatcattgattgaatttgtaattgacagatgtcaatctttcaagaggaacta 19404802  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaa 202  Q
     | ||||| || ||||| | || ||||||||||  |||||||| ||| ||||| | ||||||| | ||||| |||||||| || ||||  ||| | ||||    
T  19404803 aaagaacaccgcgacaagatgcaaaatcaaacgatgcacaagacgacgaacaatagaacgccgcacttagacgacgaaatcactaaaa-tcaaaaggaaa 19404901  T
Q  203 aactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccatcc 300  Q
    |||| ||| ||||||||||||||       |||  || ||||||| | |||||||||||||  |||||||| |||||| |||||||||||||||||| ||    
T  19404902 aacttgatttatgtgaaaaccac-ttatttagattgaaagaaaag-gaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccaccc 19404999  T
Q  301 cttctcgacgaatgaaagagaaaga 325  Q
    |||||| | |||| || ||||||||    
T  19405000 cttctcaatgaattaaggagaaaga 19405024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 8 - 225
Target Start/End: Complemental strand, 48061563 - 48061345
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    |||||||||| || ||||||   |||| ||||||||||||  |||| ||||| || || || ||||||| | |||| ||||||||||||||||||| ||     
T  48061563 tcaccgaaatactcatgcttaaggatctgcaacgttgacgctcaaaccattggttgaatttgtaattgactaatgtagatctttcaataggaactaaaca 48061464  T
Q  108 aacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaact 206  Q
    ||||| | ||||| |||| ||||||||||||||| |||| ||| ||||||| || |||| | ||||| |||||||| |||||||||||| |  |||||||    
T  48061463 aacaccgcgacaagacgcaaaatcaaacgtcgcataagacgacgaacaacaaaatgccgcacttagacgacgaaatcacaaaaacacaaaagaaaaaact 48061364  T
Q  207 cgatatatgtgaaaaccac 225  Q
     |||| |||||||||||||    
T  48061363 tgatagatgtgaaaaccac 48061345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 182
Target Start/End: Original strand, 45349749 - 45349924
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    ||||||||||||  ||||||||||||| |||| ||||||| | ||||||||| || || || ||||||| ||||| | |||||||||||||||||| |||    
T  45349749 tcaccgaaattcacatgcttccagatctgcaatgttgacgccaaaatcattgcttgaatttgtaattgactgatgccaatctttcaataggaactaaacg 45349848  T
Q  108 aaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaat 182  Q
    |||| || ||||| ||||||||||||||| | ||||| | ||| ||||||||||||||  | ||||| ||||||||    
T  45349849 aacaccgcgacaagacgcgaaatcaaacgccacacaaaacgacgaacaacacaacgccacacttagacgacgaaat 45349924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 24770391 - 24770205
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||| |||||||||  |||||||  ||||  ||||||||||| ||||||||||| || || || | ||||| ||||| ||||||||||||| ||| ||    
T  24770391 taagtctccgaaattcacatgcttctggatcttcaacgttgacgcccaaatcattggttgaatttgtgattgactgatgccgatctttcaataagaaata 24770292  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaa 189  Q
     ||||||| || ||||| || ||||||||||||||||| |||| ||| ||||||||||| ||| | ||||| |||||||| ||||||    
T  24770291 aacgaacaccgcgacaagacacgaaatcaaacgtcgcataagacgacgaacaacacaacaccgcacttagacgacgaaatcacaaaa 24770205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 38 - 190
Target Start/End: Original strand, 9977186 - 9977339
Alignment:
Q  38 aacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaaacgcgaaatcaaacgt 136  Q
    |||||||||| ||||||||||| || || || ||||||| ||| |||||||||||||||||||||| | || || || ||||| |||||||||||||||     
T  9977186 aacgttgacgcccaaatcattgtttgaatttgtaattgactgaagtcgatctttcaataggaactaaatgagcaccgcgacaagacgcgaaatcaaacgc 9977285  T
Q  137 cgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
    |  |||||| ||| ||||| ||||||| | | ||||| |||||||| |||||||    
T  9977286 caaacaagacgacgaacaatacaacgctgcacttagacgacgaaatcacaaaaa 9977339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 4 - 160
Target Start/End: Complemental strand, 46700180 - 46700023
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||||||||    |||||||| |||| |||||| ||| | |||||||||||||| || || || |||| |||||||||| |||||||||||||||    
T  46700180 taagtcaccgaaatatccatgcttccggatctgcaacgctgatgcccaaatcattgattgaatttgtagttgactgatgtcgatatttcaataggaacta 46700081  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaa 160  Q
     ||||||| |  ||||| ||| ||||||||||| |||| |||| ||| ||||||||||    
T  46700080 aacgaacaccacgacaagacgtgaaatcaaacgccgcagaagacgacgaacaacacaa 46700023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 3267236 - 3267377
Alignment:
Q  82 gtcgatctttcaataggaactatacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaa 180  Q
    ||||||||||||||| ||| || |||||||| |||| || ||||||||||||||||||||||||| ||| ||||||| ||||||| | |||| |||||||    
T  3267236 gtcgatctttcaatatgaattaaacgaacaccgtgataagacgcgaaatcaaacgtcgcacaagacgacgaacaacaaaacgccgcacttaggtgacgaa 3267335  T
Q  181 at-aacaaaaacacaataagaaaaactcgatatatgtgaaaa 221  Q
     | || |||| ||||| |  ||||||| |||| |||||||||    
T  3267336 gtcaaaaaaaccacaaaagaaaaaacttgatagatgtgaaaa 3267377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 137 - 295
Target Start/End: Complemental strand, 40993193 - 40993032
Alignment:
Q  137 cgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaactcgatatatgtgaaaaccacnnnnnnnaga 235  Q
    ||||||||||||| ||||||||||||||| | ||||| |||||||| || |||||||||| | |||||||| |||| |||||||||||||       |||    
T  40993193 cgcacaagatgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaacacaaaaggaaaaacttgatagatgtgaaaaccac-ttatttaga 40993095  T
Q  236 acgagagaaaagagg-aaaaaagatgtagcgg-gtgattttaggtc-aaaaatgacctaaaac 295  Q
      || ||||||| || ||||||||||||| || ||||||||||||| ||||||||||||||||    
T  40993094 ttgaaagaaaagtggaaaaaaagatgtagaggagtgattttaggtcaaaaaatgacctaaaac 40993032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 25287132 - 25287351
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||||||||    |||||| |||||| | ||  ||||||  ||||||||||||| || || ||||||| ||||||| ||||||||||| ||| ||    
T  25287132 taagtcaccgaaatatccatgctttcagatctgtaatattgacgctcaaatcattgattgaatttgtaattgattgatgtcaatctttcaataagaagta 25287231  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaa 201  Q
     | |||||| | ||||| | | ||||||||| ||||||||||| ||| ||||||||||||||  | |||||  || |||| || ||||||| || |||||    
T  25287232 aatgaacaccgcgacaagatgtgaaatcaaatgtcgcacaagacgacgaacaacacaacgccacacttagacaacaaaatcacaaaaaacataaaaagaa 25287331  T
Q  202 aaactcgatatatgtgaaaa 221  Q
    |||||  ||||| |||||||    
T  25287332 aaacttaatatacgtgaaaa 25287351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 1749334 - 1749411
Alignment:
Q  249 ggaaaaaagatgtagcgggtgattttaggtcaaaaa-tgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||||| || |||| ||||| || |||||||| ||||    
T  1749334 ggaaaaaagatgaagcgggtgattctaggtcaaaaattgacctaaaatcacccctcctcgatgagtgaaagaggaaga 1749411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 28062196 - 28062267
Alignment:
Q  31 gatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    |||| ||||| |||||||||||||||||| || || || ||||||| |||||| ||||||||||||| ||||    
T  28062196 gatctgcaacattgacgtccaaatcattgcttgaatttataattgattgatgtagatctttcaatagaaact 28062267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 4999993 - 5000047
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattga 76  Q
    |||||||||||||||||||||||| |||||||| ||||||| || || |||||||    
T  4999993 atgcttccagatcagcaacgttgaagtccaaataattgattgaatttgtaattga 5000047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 341
Target Start/End: Complemental strand, 5792662 - 5792620
Alignment:
Q  299 cccttctcgacgaatgaaagagaaagagaggttgagaaactcg 341  Q
    ||||||||||||||||||||||||||| || ||||||||||||    
T  5792662 cccttctcgacgaatgaaagagaaagaaagtttgagaaactcg 5792620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 221
Target Start/End: Complemental strand, 4530108 - 4530005
Alignment:
Q  116 acaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaactcgatatatg 215  Q
    |||| |||| |||||||||| | ||||| ||||| || |||||||| ||||| ||||| |||||||| ||||||| |||  |||||||| | ||||||||    
T  4530108 acaagacgcaaaatcaaacgccacacaa-atgacgaataacacaacaccgtacttagacgacgaaatcacaaaaa-acacaaagaaaaatttgatatatg 4530011  T
Q  216 tgaaaa 221  Q
    ||||||    
T  4530010 tgaaaa 4530005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 35132855 - 35132772
Alignment:
Q  244 aaagaggaaaaaagatgtagcggg-tgattttaggtcaaaaa-tgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    |||| ||||||||||||||| ||| ||||| ||||||||||| |||||||||| || |||| ||||| || |||||||| ||||    
T  35132855 aaaggggaaaaaagatgtagaggggtgattctaggtcaaaaattgacctaaaatcacccctcctcgatgagtgaaagaggaaga 35132772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 28044706 - 28044800
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    |||||||||| |  ||| |||| |||| ||||||||||||| ||||||| || || || || ||||||| |||| | |||||||||||| |||||    
T  28044706 tcaccgaaatacccatgtttccggatctgcaacgttgacgttcaaatcaatgcttgaatttataattgattgatatagatctttcaataagaact 28044800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 38880542 - 38880632
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac 112  Q
    ||||||||||||| ||||||||| |  |||||||||||||| || || | ||||| ||| |  |||||||||||| |||| | ||||||||    
T  38880542 atgcttccagatctgcaacgttggcacccaaatcattgattgaatttgtgattgactgaagctgatctttcaataagaaccaaacgaacac 38880632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 35133065 - 35132984
Alignment:
Q  31 gatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac 112  Q
    |||| |||||||||||| |||||||||||||| || || | ||||  ||| || |||||||||||| |||| | ||||||||    
T  35133065 gatctgcaacgttgacgcccaaatcattgattgaatttgtgattgtctgaagttgatctttcaatacgaaccaaacgaacac 35132984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 1769142 - 1769182
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatt 62  Q
    ||||||||||||| |||||||| |||| |||||||||||||    
T  1769142 atgcttccagatctgcaacgttcacgttcaaatcattgatt 1769182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 5348570 - 5348646
Alignment:
Q  36 gcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac 112  Q
    ||||||| |||| |||||||||||||| ||  | ||||||| |||  | ||||||||||||||||| | ||||||||    
T  5348570 gcaacgtcgacgcccaaatcattgattgaatctgtaattgattgaaattgatctttcaataggaaccaaacgaacac 5348646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 26610952 - 26610984
Alignment:
Q  265 gggtgattttaggtcaaaaatgacctaaaacca 297  Q
    ||||||||||||||||||||| |||||||||||    
T  26610952 gggtgattttaggtcaaaaataacctaaaacca 26610984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 27997098 - 27997046
Alignment:
Q  138 gcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
    |||||||||||| |||||||||| |||| | | ||| ||||||||||||||||    
T  27997098 gcacaagatgacgaacaacacaatgccgcactcagacgacgaaataacaaaaa 27997046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 28476236 - 28476146
Alignment:
Q  132 aacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac--aaaaacacaataagaaaaactcgatatatgtgaaaa 221  Q
    |||| ||||||||| ||| |||||||||||| || | | ||| |||||||| ||  |||||||||| |||||||||| ||| ||||||||||    
T  28476236 aacgccgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcacgaaaaaacacaa-aagaaaaacttgatgtatgtgaaaa 28476146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 4e-66; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 3 - 325
Target Start/End: Complemental strand, 22611347 - 22611023
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| || |||||||| |||| |||||||||||||||||||||||| || || || ||||||| |||||| ||||||||||||||||||    
T  22611347 ttaagtcaccgaaatactcatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgactgatgtagatctttcaataggaact 22611248  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
      || |||| || |||||||||| |||||||||| ||||||||| ||| ||||||||||||||| | ||||| |||||||| || |||||||||| | ||    
T  22611247 gaacaaacaccgcgacaaaacgcaaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaacacaaaagga 22611148  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtcaaaaatgacctaaaaccatc 299  Q
     ||||| |||| |||||||||||||       |||  || ||||||| |||||||||||||||  |||||||| |||||||||||||||||||||||| |    
T  22611147 taaacttgatagatgtgaaaaccac-ttatttagattgaaagaaaaggggaaaaaagatgtagatgggtgattctaggtcaaaaatgacctaaaaccacc 22611049  T
Q  300 ccttctcgacgaatgaaagagaaaga 325  Q
    ||| ||||||||| ||| ||||||||    
T  22611048 cctcctcgacgaacgaaggagaaaga 22611023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 54021996 - 54021728
Alignment:
Q  31 gatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaaacgcgaaat 129  Q
    |||| ||||||||||| ||||||||||||||| || || ||||||| |||||||||||||||||||||||||| |||||||| | ||||| || ||||||    
T  54021996 gatctgcaacgttgacatccaaatcattgattcaatttgtaattgactgatgtcgatctttcaataggaactaaacgaacaccgcgacaagacacgaaat 54021897  T
Q  130 caaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaaaccacnnnn 229  Q
    |||||| ||||||||| |||||||||||||| |||| |||||||  ||||||| |||||||||||| | |||||||| ||||||||||||||||||        
T  54021896 caaacgccgcacaagacgactaacaacacaatgccgcaattagacaacgaaatcacaaaaacacaaaaggaaaaactggatatatgtgaaaaccac-tta 54021798  T
Q  230 nnnagaacgagagaaaagaggaaaaaagatgtagcggg-tgattttaggtc-aaaaatgacctaaaacca 297  Q
       |||  || ||||||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||    
T  54021797 tttagattgaaagaaaagaggaaaaaagatgtagagggatgattttatgtcaaaaaatgacctaaaacca 54021728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 325
Target Start/End: Complemental strand, 53811192 - 53810867
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| || |||||||| |||| |||||||||||||||||||||||| || || || ||||||| |||||| ||||||||||||||||||    
T  53811192 ttaagtcaccgaaatactcatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgactgatgtagatctttcaataggaact 53811093  T
Q  103 atacgaa-cacgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
      || || | || ||||||||||||||||||||| ||||||||| ||| ||||||| ||||||| | |||||||||||||| || |||||||||| | ||    
T  53811092 gaacaaaccccgcgacaaaacgcgaaatcaaacgccgcacaagacgacgaacaacaaaacgccgcatttagatgacgaaatgacaaaaaacacaaaagga 53810993  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccat 298  Q
    | |||| |||| ||||||||| |||       | |  || ||||||| || ||||||||||||  |||||||| |||||| ||||||||||||||||||     
T  53810992 ataacttgatagatgtgaaaatcacttatttaa-attgaaagaaaagggggaaaaagatgtagaggggtgattataggtcaaaaaatgacctaaaaccac 53810894  T
Q  299 cccttctcgacgaatgaaagagaaaga 325  Q
    |||| ||||| ||| ||| ||| ||||    
T  53810893 ccctcctcgatgaacgaaggaggaaga 53810867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 3 - 325
Target Start/End: Original strand, 19853457 - 19853781
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    |||||||||||||||    |||||||| |||| |||||||||||||||||||||||| || || || ||||||| |||||| ||||||||||||||||||    
T  19853457 ttaagtcaccgaaatatccatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgagtgatgtagatctttcaataggaact 19853556  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
      || |||| ||||| ||||||| |||||||| | | || |||| ||| ||||||||||||||| | ||||| |||||||| || ||||||| || |  |    
T  19853557 gaacaaacaccgtgataaaacgcaaaatcaaatgccacataagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaacaaaaaagaa 19853656  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtcaaaaatgacctaaaaccatc 299  Q
    |||||| |||| |||||||||||||       |||  |  ||||||| |||||||||||||||  |||||||| |||||||||||||||||||||||| |    
T  19853657 aaaacttgatagatgtgaaaaccac-ttatttagattggaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaatgacctaaaaccacc 19853755  T
Q  300 ccttctcgacgaatgaaagagaaaga 325  Q
    ||| ||||| ||||||| | ||||||    
T  19853756 cctcctcgatgaatgaaggggaaaga 19853781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 325
Target Start/End: Complemental strand, 2520938 - 2520616
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    |||||||||| |  |||||||| |||| |||||||||||||||||||||||| ||||| || ||||||| |||||| |||||||||||||||| |  ||     
T  2520938 tcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattgctttaatttgtaattgattgatgtagatctttcaataggaattgaaca 2520839  T
Q  108 aaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaaca--acacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaa 203  Q
    |||| || ||||||||||||||||||||| ||||||||| ||| ||||  ||||||| ||| | ||||| |||||||| || |||||||||| |  ||||    
T  2520838 aacatcgcgacaaaacgcgaaatcaaacgccgcacaagacgacgaacaacacacaacaccgcacttagacgacgaaatcacaaaaaacacaaaagaaaaa 2520739  T
Q  204 actcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccatccc 301  Q
    ||| |||| |||||||||||||       |||  ||  |||||| |||||||||||||||  |||||||| |||||| |||||||||||||||||| |||    
T  2520738 acttgatagatgtgaaaaccac-ttatttagattgaacgaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccc 2520640  T
Q  302 ttctcgacgaatgaaagagaaaga 325  Q
    | ||||| ||| ||| ||||||||    
T  2520639 tcctcgatgaacgaaggagaaaga 2520616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 325
Target Start/End: Original strand, 21686192 - 21686510
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    ||||| |||| || |||||||| |||| |||||||||||||||||||||||| || || || ||| ||| |||||| ||||||||||||||||||  ||     
T  21686192 tcaccaaaatactcatgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttgtaactgattgatgtagatctttcaataggaactgaaca 21686291  T
Q  108 aaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaac 205  Q
    |||| || | ||| ||||||||||||||| ||||||||| ||| |||||||| |||||| | ||||| |||||||| || |||||||||| | |||||||    
T  21686292 aacaccgcggcaagacgcgaaatcaaacgccgcacaagacgacgaacaacac-acgccgcacttagacgacgaaatcacaaaaaacacaaaaggaaaaac 21686390  T
Q  206 tcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtcaaaaatgacctaaaaccatcccttc 304  Q
    | |||| |||||||||||||       |||  || ||||||| |||||||||||||||  |||||||||||||||||||| ||||| |||||| |||| |    
T  21686391 ttgatagatgtgaaaaccac-ttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattttaggtcaaaaaagacctcaaaccacccctcc 21686489  T
Q  305 tcgacgaatgaaagagaaaga 325  Q
    |||| |||  || ||||||||    
T  21686490 tcgatgaacaaaggagaaaga 21686510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 323
Target Start/End: Complemental strand, 32766678 - 32766355
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| |  ||| |||| |||| ||||| ||||||||||||||||||||| || || ||||||| |||||| ||||||| ||||||||||    
T  32766678 ttaagtcaccgaaatacccatgtttccggatctgcaacattgacgtccaaatcattgattgaatttgtaattgactgatgtagatcttttaataggaact 32766579  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataa-ga 200  Q
      || |||| || ||||||||||||||||||||| ||||||||| ||| ||||||||||| ||| | ||||| |||||||| |||||||  ||| || ||    
T  32766578 gaacaaacaccgcgacaaaacgcgaaatcaaacgccgcacaagacgacgaacaacacaacaccgcacttagacgacgaaatcacaaaaaaccaaaaagga 32766479  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccat 298  Q
    |||||| |||| ||||||||| |||       |||  || ||||||| |||||||||||||||  |||||||| |||||| ||||||||||||||||||     
T  32766478 aaaacttgatagatgtgaaaaacac-ttacttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 32766380  T
Q  299 cccttctcgacgaatgaaagagaaa 323  Q
    ||| |||| | ||| ||| ||||||    
T  32766379 cccctctcaatgaacgaaggagaaa 32766355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 225
Target Start/End: Complemental strand, 43095791 - 43095570
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||  |||||||| |||||||| |||| |||  ||||||| |||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  43095791 taagtcagtgaaattctcatgcttccggatctgcactgttgacggccaaatcattgatttaacttgtaattgactgatgtcgatcttccaataggaacta 43095692  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaa 202  Q
     | ||||| |||||||| ||||||||||||||  || |||||| |||||||||||||| |  | |||||||  ||| ||| |||||| ||||| || |||    
T  43095691 aatgaacatcgtgacaagacgcgaaatcaaacaccgtacaagacgactaacaacacaatgttgcaattagactacggaatcacaaaagcacaacaa-aaa 43095593  T
Q  203 aactcgatatatgtgaaaaccac 225  Q
    |||||||||||||||||||||||    
T  43095592 aactcgatatatgtgaaaaccac 43095570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 36 - 297
Target Start/End: Original strand, 10258874 - 10259136
Alignment:
Q  36 gcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaaacgcgaaatcaaac 134  Q
    ||||||||| || |||||||||||||| || || ||||||| | ||||||||||||||| | |||||| |||||||| | | ||| ||||||||||||||    
T  10258874 gcaacgttggcgcccaaatcattgattgaatttgtaattgactaatgtcgatctttcaacatgaactaaacgaacaccgcgtcaagacgcgaaatcaaac 10258973  T
Q  135 gtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaaaccacnnnnnnnag 234  Q
     || || ||||  ||||||||||||| |||  |||||||||||||||| |||||||| ||| | | |||||| |||||||||||||||||        ||    
T  10258974 atcacataagaccactaacaacacaatgccacaattagatgacgaaatcacaaaaactcaaaagggaaaacttgatatatgtgaaaacca-tttgtttag 10259072  T
Q  235 aacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtcaaaaatgacctaaaacca 297  Q
    | ||| ||||||||| ||||| |||||||  |||||||||||||||||||||||||||||||||    
T  10259073 atcgaaagaaaagagaaaaaacgatgtagaggggtgattttaggtcaaaaatgacctaaaacca 10259136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 325
Target Start/End: Original strand, 4142697 - 4143024
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| || ||| |||  |||| |||||||||||||||||||||||| || || || ||||||| |||||| |||||||||| ||||| |    
T  4142697 ttaagtcaccgaaatactcatgtttctggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgactgatgtagatctttcaagaggaatt 4142796  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaa---cgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaata 197  Q
      || |||| || |||||||| ||||||||||   || ||||||||| ||| ||||||||||||||| | ||||| |||||||| || |||||||||| |    
T  4142797 gaacaaacaccgcgacaaaacacgaaatcaaacgccgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaacacaaaa 4142896  T
Q  198 agaaaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaac 295  Q
     |||||||| |||| ||||||||| |||       |||  || ||||||| |||||||||||||||  |||||||| |||||| ||||||||||||||||    
T  4142897 ggaaaaacttgatagatgtgaaaa-cac-ttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaac 4142994  T
Q  296 catcccttctcgacgaatgaaagagaaaga 325  Q
    || |||| ||||| |||  || ||||||||    
T  4142995 cacccctcctcgatgaacaaaggagaaaga 4143024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 25 - 225
Target Start/End: Original strand, 17949291 - 17949493
Alignment:
Q  25 cttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaaacg 123  Q
    ||||| |||| ||||||||||||  | |||||||| || || || ||||||| |||||| |||||||||||||||| || |||||||| | |||||||||    
T  17949291 cttccggatctgcaacgttgacgctccaatcattggttgaatttgtaattgactgatgtagatctttcaataggaattaaacgaacaccgcgacaaaacg 17949390  T
Q  124 cgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaactcgatatatgtgaaaac 222  Q
    | |||||||||| ||||||| | ||| ||||||||||||||| | ||||| |||||||| || |||||||||| | |||||||| ||||| |||||||||    
T  17949391 caaaatcaaacgccgcacaacacgacaaacaacacaacgccgcacttagacgacgaaatcacaaaaaacacaaaaggaaaaacttgatatgtgtgaaaac 17949490  T
Q  223 cac 225  Q
    |||    
T  17949491 cac 17949493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 25 - 225
Target Start/End: Original strand, 17953143 - 17953345
Alignment:
Q  25 cttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaaacg 123  Q
    ||||| |||| ||||||||||||  | |||||||| || || || ||||||| |||||| |||||||||||||||| || |||||||| | |||||||||    
T  17953143 cttccggatctgcaacgttgacgctccaatcattggttgaatttgtaattgactgatgtagatctttcaataggaattaaacgaacaccgcgacaaaacg 17953242  T
Q  124 cgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaactcgatatatgtgaaaac 222  Q
    | |||||||||| ||||||| | ||| ||||||||||||||| | ||||| |||||||| || |||||||||| | |||||||| ||||| |||||||||    
T  17953243 caaaatcaaacgccgcacaacacgacaaacaacacaacgccgcacttagacgacgaaatcacaaaaaacacaaaaggaaaaacttgatatgtgtgaaaac 17953342  T
Q  223 cac 225  Q
    |||    
T  17953343 cac 17953345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 26 - 225
Target Start/End: Complemental strand, 13634256 - 13634055
Alignment:
Q  26 ttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaaacgc 124  Q
    |||| |||| |||||||||||||||||||| ||| || || || ||||||| |||||| ||||||||||||||||||  || |||| || ||||| ||||    
T  13634256 ttccggatctgcaacgttgacgtccaaatcgttgcttgaatttgtaattgattgatgtagatctttcaataggaactgaacaaacaccgcgacaagacgc 13634157  T
Q  125 gaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaactcgatatatgtgaaaacc 223  Q
    |||||| ||| |||||||||| ||| ||||||||||||||| | ||||| |||||||| || |||||||||| |  ||||||| |||| |||||||||||    
T  13634156 gaaatctaacctcgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaacacaaaagaaaaaacttgatagatgtgaaaacc 13634057  T
Q  224 ac 225  Q
    ||    
T  13634056 ac 13634055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 4 - 190
Target Start/End: Complemental strand, 8670648 - 8670461
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||||||||||  |||||| | ||||  ||||||||||| ||||||||||| || || || ||||||| ||||| ||||||||||||||||| ||    
T  8670648 taagtcaccgaaattcacatgctttcggatcttcaacgttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaataggaaata 8670549  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
     ||||||| || |||||  |||||||||||||  ||||||||||||||||||||||||||||| | ||| | ||| |||| |||||||    
T  8670548 aacgaacaccgcgacaagtcgcgaaatcaaacaccgcacaagatgactaacaacacaacgccgcacttacacgacaaaatcacaaaaa 8670461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 4 - 190
Target Start/End: Complemental strand, 53444281 - 53444094
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||||||||||  |||||||| ||||  |||| |||||| ||||||||||| || || || ||||||| ||||| ||||||||||||||||| ||    
T  53444281 taagtcaccgaaattcacatgcttccggatcttcaacattgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaataggaaata 53444182  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
     || |||| || |||||||||||||||||||   ||||||||| ||| |||||||||||| |||| ||||| |||||||| |||||||    
T  53444181 aacaaacaccgcgacaaaacgcgaaatcaaataccgcacaagacgacgaacaacacaacgtcgtacttagacgacgaaatcacaaaaa 53444094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 56156588 - 56156775
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||||||||||  ||||||||||||| |||| ||||||| || |||||||| || || || ||||||| ||||||  ||||||||| ||||||||    
T  56156588 taagtcaccgaaattcacatgcttccagatctgcaatgttgacgccccaatcattggttgaatttgtaattgactgatgttaatctttcaagaggaacta 56156687  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
     ||||||| || ||||| ||||||||||||||| | ||||||| ||| ||||||||||||||  | ||||| |||||||| |||||||    
T  56156688 aacgaacaccgcgacaagacgcgaaatcaaacgccacacaagacgacgaacaacacaacgccacacttagacgacgaaatcacaaaaa 56156775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 9178507 - 9178329
Alignment:
Q  13 gaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaac-a 111  Q
    ||||| ||| |||||||||||| |||||||||| |  ||||| |||||||  | || ||||||| |||||||||||||||||||||||||| |||||| |    
T  9178507 gaaatacttttgcttccagatctgcaacgttgatgctcaaattattgattggatttgtaattgattgatgtcgatctttcaataggaactaaacgaacaa 9178408  T
Q  112 cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
    || ||||| ||||||||||||||| | ||||||||||| ||||| |||||| || | |||||||| ||||| |||||||    
T  9178407 cgcgacaagacgcgaaatcaaacgccacacaagatgacgaacaatacaacgtcgcacttagatgatgaaatcacaaaaa 9178329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 56040592 - 56040813
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  |||||||  |||| ||||||||| || ||||||||||| || || || ||||||| |||||| |||||| ||||||||||||    
T  56040592 taagtcaccgaaatacccatgcttctggatctgcaacgttgccgcccaaatcattggttgaatttgtaattgactgatgtagatcttccaataggaacta 56040691  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaa 202  Q
     || ||||| | ||||| |||| |||| ||||| ||||||||| ||| ||||||| ||||||| | ||| | |||||||| |||||||||||| || |||    
T  56040692 aacaaacactgcgacaagacgcaaaattaaacgccgcacaagacgacgaacaacaaaacgccgcacttaaacgacgaaatcacaaaaacacaagaa-aaa 56040790  T
Q  203 aactcgatatatgtgaaaaccac 225  Q
    |||| |||| |||||||||||||    
T  56040791 aacttgatagatgtgaaaaccac 56040813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 26633617 - 26633840
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||| |||||  | |||||||| |||| ||||| |||||||||||||||||| || || || |||| || |||||| ||||||||||||||||||     
T  26633617 taagtcacagaaatattcatgcttccggatctgcaacattgacgtccaaatcattggttgaatttgtaatcgactgatgtagatctttcaataggaactg 26633716  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaa 201  Q
     || ||||| | ||||| ||||||| || || | ||||||||| ||| ||||||||||||||| | ||||| |||||||| || |||||||||| |  ||    
T  26633717 aacaaacactgcgacaagacgcgaagtccaatgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaacacaaaagaaa 26633816  T
Q  202 aaactcgatatatgtgaaaaccac 225  Q
    ||||| |||| |||||||||||||    
T  26633817 aaacttgatagatgtgaaaaccac 26633840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 297
Target Start/End: Complemental strand, 43510360 - 43510066
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| |  |||||||  |||| ||||| |||||||||||||||||  ||||| || |||| || |||||| |||||||||| ||||| |    
T  43510360 ttaagtcaccgaaatacccatgcttcaggatctgcaacattgacgtccaaatcattagtttaatttgtaat-gactgatgtagatctttcaagaggaatt 43510262  T
Q  103 atacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaa 201  Q
      || ||||| | |||||||| |||||||||||| ||||||||| ||| || |||||||||||| | ||||| |||||||| ||||||| || | | |||    
T  43510261 gaacaaacaccgcgacaaaacacgaaatcaaacgccgcacaagacgacaaataacacaacgccgcacttagacgacgaaatcacaaaaa-acgaaaggaa 43510163  T
Q  202 aaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtagcgg-gtgattttaggtc-aaaaatgacctaaaacca 297  Q
    ||||| |||| |||||||| ||||       |||  || ||||||| | ||||||||||||| || |||||| |||||| ||||||||||||||||||    
T  43510162 aaacttgataaatgtgaaagccac-ttatttagattgaaagaaaagggaaaaaaagatgtagaggagtgattctaggtcaaaaaatgacctaaaacca 43510066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 33921217 - 33920995
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaactttt----aattgaatgatgtcgatctttcaatagga 99  Q
    |||||||| ||||| |  |||||||| |||| ||||||||||||  ||||| ||||||| || || |    ||||||  |||||||||||||||||||||    
T  33921217 taagtcactgaaatacccatgcttccggatctgcaacgttgacgctcaaattattgattgaatttgtttgtaattgac-gatgtcgatctttcaatagga 33921119  T
Q  100 actatacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa-cacaata 197  Q
    |||| |||||||| | ||||| ||| |||||||||||||||| |||| | | ||||||||||||||| | ||||| |||||||| ||||||| ||||| |    
T  33921118 actaaacgaacactgcgacaagacgtgaaatcaaacgtcgcataagacggcgaacaacacaacgccgcacttagacgacgaaatcacaaaaagcacaaaa 33921019  T
Q  198 agaaaaactcgatatatgtgaaaa 221  Q
      ||||||| ||||||||||||||    
T  33921018 gaaaaaacttgatatatgtgaaaa 33920995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 297
Target Start/End: Complemental strand, 10496494 - 10496209
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    |||||||||| |  |||||| | |||| |||| ||||||| ||||||||||| || || || ||||||| ||||| |||||||||||||||||||| |||    
T  10496494 tcaccgaaatacccatgcttacggatctgcaaagttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaataggaactaaacg 10496395  T
Q  108 aacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaact 206  Q
    ||||| | ||||| |||| |||||||||||| ||||||| ||| ||||||||| ||||| | ||| | ||||||| |  |||| ||||| | ||||||||    
T  10496394 aacactgcgacaagacgcaaaatcaaacgtcacacaagacgacgaacaacacatcgccgcacttacacgacgaaaca--aaaatcacaaaaggaaaaact 10496297  T
Q  207 cgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtagcgggtgattttaggtcaaaaa-tgacctaaaacca 297  Q
     |||   ||||||||||||       |||   | ||||||  ||||||||||||||  |||||||| ||||||||||| |||||||||||||    
T  10496296 tgat---tgtgaaaaccac-ttatttagattaaaagaaaatgggaaaaaagatgtatagggtgattctaggtcaaaaattgacctaaaacca 10496209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 182
Target Start/End: Original strand, 24099013 - 24099192
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||| ||||| |  ||| |||| |||| |||||||||||||||||||||||| || || || ||||||| |||||| ||||||||||||||||||     
T  24099013 taagtcactgaaatacccatgtttccggatctgcaacgttgacgtccaaatcattgcttgaatttgtaattgattgatgtagatctttcaataggaactg 24099112  T
Q  104 tacgaac-acgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaat 182  Q
     || |||  || ||||| |||||||||||| || ||||||||| ||| ||||||| || |||| | ||||| ||||||||    
T  24099113 aacaaactccgcgacaagacgcgaaatcaatcgccgcacaagacgacgaacaacaaaatgccgcacttagacgacgaaat 24099192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 4 - 294
Target Start/End: Complemental strand, 35348470 - 35348176
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||  |||||||  |||||||| |||| ||||||||||| |||| ||||||| || || || ||||||| |   | |||||||||||||| |||||    
T  35348470 taagtcattgaaattcacatgcttccggatctgcaacgttgacatccagatcattggttgaatttgtaattgactatcgccgatctttcaatagtaacta 35348371  T
Q  104 tacgaacacgtga-caaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaat----aacaaaaacacaataa 198  Q
     ||||||||   | ||| |  |||||||||||| ||||||||| ||| ||||||||||||||| | ||||| ||||||||    || |||||||||| ||    
T  35348370 aacgaacaccacaacaagaaacgaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaaaaacacaa-aa 35348272  T
Q  199 gaaaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtagcg-ggtgattttaggtc-aaaaatgacctaaaa 294  Q
    |||||||| ||||| ||||||||||||       |||  || ||||||| ||||||||||||||| | ||||||| |||||| |||||||||||||||    
T  35348271 gaaaaacttgatatttgtgaaaaccac-ttatttagattgaaagaaaag-ggaaaaaagatgtagagaggtgattctaggtcaaaaaatgacctaaaa 35348176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 72 - 225
Target Start/End: Complemental strand, 5119434 - 5119279
Alignment:
Q  72 attgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaatt 170  Q
    ||||| |||||||||||||||||||||||||| ||||||| || || || || | |||||||||| |||| ||||  || ||||||||||  ||| | ||    
T  5119434 attgattgatgtcgatctttcaataggaactaaacgaacaccgcgataagacacaaaatcaaacgccgcaaaagacaacgaacaacacaataccgcactt 5119335  T
Q  171 agatgacgaaataaca-aaaacacaataagaaaaactcgatatatgtgaaaaccac 225  Q
    ||| |||||||| ||| ||||||||| | |||||||| ||||||||||||||||||    
T  5119334 agacgacgaaatcacacaaaacacaaaaggaaaaacttgatatatgtgaaaaccac 5119279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 21662600 - 21662469
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  |||||||| |||| ||||||||||||  |||||||||||||  | || ||||||| |||||| |||||||||||||||||||    
T  21662600 taagtcaccgaaatacccatgcttccggatctgcaacgttgacgctcaaatcattgattggatttgtaattgactgatgttgatctttcaataggaacta 21662501  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaac 134  Q
     ||||| | || ||||| ||||||||||||||    
T  21662500 aacgaataccgcgacaagacgcgaaatcaaac 21662469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 21671364 - 21671233
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  |||||||| |||| ||||||||||||  |||||||||||||  | || ||||||| |||||| |||||||||||||||||||    
T  21671364 taagtcaccgaaatacccatgcttccggatctgcaacgttgacgctcaaatcattgattggatttgtaattgactgatgttgatctttcaataggaacta 21671265  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaac 134  Q
     ||||| | || ||||| ||||||||||||||    
T  21671264 aacgaataccgcgacaagacgcgaaatcaaac 21671233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 26090860 - 26091083
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  ||||||||  ||  |||||||||||| ||||||||||  || || || ||||||| ||||||||||||||||| | ||||||    
T  26090860 taagtcaccgaaataccaatgcttccgaatttgcaacgttgacgcccaaatcattagttgaatttataattgactgatgtcgatctttcaagatgaacta 26090959  T
Q  104 tacgaaca-cgtgacaaaacgc--gaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataaga 200  Q
     ||||||| ||||| || ||||   |||||||||| ||||||| | | | ||||||| ||||||| | ||| |  ||||||| || |||| |||| | ||    
T  26090960 aacgaacaccgtgataagacgcaaaaaatcaaacgccgcacaaaacggcgaacaacagaacgccgcatttaaacaacgaaatcactaaaa-acaaaagga 26091058  T
Q  201 aaaactcgatatatgtgaaaaccac 225  Q
    |||||| ||| ||||||||||||||    
T  26091059 aaaacttgatttatgtgaaaaccac 26091083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 114 - 225
Target Start/End: Original strand, 29120420 - 29120532
Alignment:
Q  114 tgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaactcgatat 212  Q
    |||||| |||||||||||||||||| |||||| ||  ||||||||| ||||| | ||||| |||||||| || |||||||||| ||||||||   |||||    
T  29120420 tgacaagacgcgaaatcaaacgtcgtacaagacgatgaacaacacagcgccgcacttagacgacgaaatcacaaaaaacacaaaaagaaaaatcggatat 29120519  T
Q  213 atgtgaaaaccac 225  Q
    |||||||||||||    
T  29120520 atgtgaaaaccac 29120532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 225
Target Start/End: Original strand, 40066048 - 40066224
Alignment:
Q  51 aaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgac 149  Q
    |||| ||||||| || || ||||||| | ||||||||||||| |||| ||||| || || | || ||||| | |||||||||||||  ||| |||| |||    
T  40066048 aaattattgattgaatttgtaattgattaatgtcgatctttccatagaaactaaacaaatatcgcgacaagaggcgaaatcaaacgctgcataagacgac 40066147  T
Q  150 taacaacacaacgccgtaattagatgacgaaataaca-aaaacacaataagaaaaactcgatatatgtgaaaaccac 225  Q
     ||||||||||||||| | ||||| || ||||| ||| ||||||||| | ||||||||  | |||||||||||||||    
T  40066148 gaacaacacaacgccgcacttagacgatgaaatcacataaaacacaaaaggaaaaacttaaaatatgtgaaaaccac 40066224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 115 - 223
Target Start/End: Original strand, 11300049 - 11300159
Alignment:
Q  115 gacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaac--acaataagaaaaactcgatat 212  Q
    ||||| |||||||||||||||| |||||||| ||| ||||||||||| ||| | ||||| |||||||| ||||||||  ||||    ||||||| |||||    
T  11300049 gacaagacgcgaaatcaaacgttgcacaagacgacgaacaacacaacaccgcacttagacgacgaaatcacaaaaacatacaaacgaaaaaacttgatat 11300148  T
Q  213 atgtgaaaacc 223  Q
    |||||||||||    
T  11300149 atgtgaaaacc 11300159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 221
Target Start/End: Complemental strand, 37030397 - 37030207
Alignment:
Q  31 gatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaaacgcgaaat 129  Q
    |||| ||||||| || |||||||||||||||| ||  | || |||| ||| || |||||||  |||| ||| | ||| |||| | ||||| ||  |||||    
T  37030397 gatctgcaacgtcgatgtccaaatcattgattgaatctgtatttgattgaagttgatcttttgatagaaaccaaacgtacaccgcgacaagacatgaaat 37030298  T
Q  130 caaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaaa 221  Q
    |||||| |  |||||| ||| ||||||||||||||||| | |||||||||||| ||||||| || | || ||||||| ||||| ||||||||    
T  37030297 caaacgccatacaagacgacgaacaacacaacgccgtactcagatgacgaaatcacaaaaagac-acaataaaaacttgatatgtgtgaaaa 37030207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 323
Target Start/End: Complemental strand, 22300745 - 22300686
Alignment:
Q  265 gggtgattttaggtcaaaaa-tgacctaaaaccatcccttctcgacgaatgaaagagaaa 323  Q
    |||||||||||||||||||| |||||||||||||  ||| |||||||| |||||||||||    
T  22300745 gggtgattttaggtcaaaaaatgacctaaaaccactcctcctcgacgagtgaaagagaaa 22300686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 297
Target Start/End: Complemental strand, 45418540 - 45418393
Alignment:
Q  152 acaacacaacgccgtaattagatgacgaaataacaaaaa-cacaataagaaaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagagg 250  Q
    |||| ||||| ||||| ||||| |||||||| ||||||| ||||| | |||||||| |||||||||||||||| |       | |  |||||||||||||    
T  45418540 acaatacaacaccgtacttagacgacgaaatcacaaaaaacacaaaaggaaaaacttgatatatgtgaaaacctc-ttatttatattgagagaaaagagg 45418442  T
Q  251 aaaaaagatgtagcggg-tgattttaggtc-aaaaatgacctaaaacca 297  Q
    |||| || ||||| ||| ||||| |||||| ||||||||||||||||||    
T  45418441 aaaagaggtgtagagggatgattctaggtcaaaaaatgacctaaaacca 45418393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 36204590 - 36204650
Alignment:
Q  265 gggtgattttaggtcaaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    |||||||| ||||| ||||||||||||||||||||| | || || || |||||||||||||    
T  36204590 gggtgattctaggtaaaaaatgacctaaaaccatccatccttgatgattgaaagagaaaga 36204650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 22038991 - 22039068
Alignment:
Q  249 ggaaaaaagatgtagcgggtgattttaggtcaaaaat-gacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    |||||||||||| |  |||||||| ||| || ||||| |||||||||||| |||| ||||| || |||||||||||||    
T  22038991 ggaaaaaagatgcaaagggtgattctagatccaaaattgacctaaaaccacccctgctcgatgagtgaaagagaaaga 22039068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 36204346 - 36204383
Alignment:
Q  25 cttccagatcagcaacgttgacgtccaaatcattgatt 62  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  36204346 cttccggatctgcaacgttgacgtccaaatcattgatt 36204383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36700442 - 36700381
Alignment:
Q  1 atttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatt 62  Q
    |||||||||| |||||| |  | ||||||||||  |||||||||||| ||||||||||||||    
T  36700442 atttaagtcatcgaaatacccacgcttccagatttgcaacgttgacgcccaaatcattgatt 36700381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 51888175 - 51888322
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaa 120  Q
    |||||| |||||  |||||||| || || |||||||||||| || || | ||||| ||| || |||||||||||| |||| | ||||||| ||  ||||     
T  51888175 atgctttcagatatgcaacgttaacatcaaaatcattgattaaatttgtgattgattgaagttgatctttcaatatgaaccaaacgaacaccgcaacaag 51888274  T
Q  121 acgcgaaatca---aacgtcgcacaagatgactaacaacacaacgccg 165  Q
    | |||||||||   ||||||||| |||| ||  |||||||||||||||    
T  51888275 atgcgaaatcaaacaacgtcgcataagacgatgaacaacacaacgccg 51888322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 51888441 - 51888486
Alignment:
Q  280 aaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    |||||||||||||||||| |||| ||||| || |||||||||||||    
T  51888441 aaaaatgacctaaaaccacccctcctcgatgagtgaaagagaaaga 51888486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 52978734 - 52978689
Alignment:
Q  254 aaagatgtagcgggtgattttaggtcaaaaatgacctaaaaccatc 299  Q
    |||||||||  | |||||||||||||||||||||| ||||||||||    
T  52978734 aaagatgtaaagcgtgattttaggtcaaaaatgacataaaaccatc 52978689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 325
Target Start/End: Original strand, 22558651 - 22558735
Alignment:
Q  243 aaaagaggaaaaaagatgtagcg-ggtgattttaggtcaaaa-atgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    ||||| ||||||||||||||| | ||||||| || ||||||| |||||||||||||| |||| ||| | ||| ||| ||||||||    
T  22558651 aaaaggggaaaaaagatgtagagaggtgattctatgtcaaaaaatgacctaaaaccacccctcctcaatgaacgaaggagaaaga 22558735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 24099254 - 24099313
Alignment:
Q  241 agaaaagaggaaaaaagatgtagcggg-tgattttaggtc--aaaaatgacctaaaacca 297  Q
    ||||||| ||||||||||||||| ||| ||||| ||||||  ||||||||||||||||||    
T  24099254 agaaaaggggaaaaaagatgtagagggatgattctaggtcaaaaaaatgacctaaaacca 24099313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 322
Target Start/End: Original strand, 47320612 - 47320668
Alignment:
Q  267 gtgattttaggtcaaa-aatgacctaaaaccatcccttctcgacgaatgaaagagaa 322  Q
    ||||||||| |||||| ||||||||||||||| |||||||||| ||  |||||||||    
T  47320612 gtgattttaagtcaaagaatgacctaaaaccaccccttctcgatgagcgaaagagaa 47320668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 52944456 - 52944416
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatt 62  Q
    |||||||| |||| |||||||||||||||||||||| ||||    
T  52944456 atgcttccggatctgcaacgttgacgtccaaatcatcgatt 52944416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 1e-63; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 14544844 - 14545143
Alignment:
Q  1 atttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaa 100  Q
    |||||||||||||||||||  |||||||| |||| |||||||||||| |||||| ||||||||||||| ||||||| |||||||||||||||||||||||    
T  14544844 atttaagtcaccgaaattcccatgcttccggatctgcaacgttgacgcccaaataattgatttaacttgtaattgattgatgtcgatctttcaataggaa 14544943  T
Q  101 ctatacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataag 199  Q
    ||| | ||||| || ||||| ||| ||||||||||| | ||||||| ||||||||| ||||||||| ||||||| |||||||| ||||||| |||| | |    
T  14544944 ctaaatgaacaccgcgacaagacgtgaaatcaaacgccacacaagacgactaacaaaacaacgccgcaattagacgacgaaatcacaaaaatacaaaagg 14545043  T
Q  200 aaaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgt--agcgggtgattttaggtc-aaaaatgacctaaaacc 296  Q
    ||||  | ||||||||||||||||||       |||  || ||||||||| |||||||||||  || ||||||||||||||| |||||||||||||||||    
T  14545044 aaaattttgatatatgtgaaaaccac-ttatttagattgaaagaaaagagaaaaaaagatgtagagagggtgattttaggtcaaaaaatgacctaaaacc 14545142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 36 - 316
Target Start/End: Complemental strand, 28897822 - 28897541
Alignment:
Q  36 gcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaaacgcgaaatcaaac 134  Q
    |||||||| ||| |||||||||| ||| ||||| ||||||| |||||||||||||||||||||||||| ||||||| |  ||||| ||||||||||||||    
T  28897822 gcaacgtttacgcccaaatcattaattgaacttataattgactgatgtcgatctttcaataggaactaaacgaacaccacgacaagacgcgaaatcaaac 28897723  T
Q  135 gtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaaaccacnnnnnnnag 234  Q
    | | |||| ||||||||||||||||||| || |||||||  ||||||| |||||||||  || || |||||| ||||||  ||||||||||       ||    
T  28897722 gccacacacgatgactaacaacacaacgtcgcaattagacaacgaaatcacaaaaacatcat-aggaaaacttgatatacatgaaaaccac-ttatttag 28897625  T
Q  235 aacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccatcccttctcgacgaatgaa 316  Q
    |  || |||||||||||||||||||||||  |||||||||||| || ||||||||| |||||||| |||| |||||||||||||    
T  28897624 attgaaagaaaagaggaaaaaagatgtagaggggtgattttagatcaaaaaatgacttaaaaccacccctcctcgacgaatgaa 28897541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 22 - 325
Target Start/End: Original strand, 27110427 - 27110732
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaa 120  Q
    ||||||||||||| ||||||||||||  ||||||||||||| || || || |||  ||||||| ||||||||| | |||||| |||||||| | |||||     
T  27110427 atgcttccagatctgcaacgttgacgctcaaatcattgattgaatttgtagttgtctgatgtcaatctttcaacatgaactaaacgaacactgcgacaag 27110526  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaa 220  Q
    |||| |||||||||| | ||||||| ||||| ||||||||||| | |||||||||||||||| |||||||||||| | |||||||| ||||||||||||     
T  27110527 acgcaaaatcaaacgccacacaagacgactaccaacacaacgctgcaattagatgacgaaattacaaaaacacaaaaggaaaaacttgatatatgtgaag 27110626  T
Q  221 accacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccatcccttctcgacgaatgaaag 318  Q
    |||||       |||  || ||||||||| |||||||||||||  | |||||||||| || |||||||||||||||||| || |  |||| ||||||| |    
T  27110627 accac-ttatttagattgaaagaaaagagtaaaaaagatgtagatgtgtgattttagatcaaaaaatgacctaaaaccacccatcttcgatgaatgaagg 27110725  T
Q  319 agaaaga 325  Q
    |||||||    
T  27110726 agaaaga 27110732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 297
Target Start/End: Original strand, 7883185 - 7883480
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  |||||||| |||| |||||| |||||||||||| |||| || || || ||||||| | |||| |||||||||||| |||||     
T  7883185 taagtcaccgaaatacccatgcttccggatctgcaacgctgacgtccaaattattgcttgaatttgtaattgattaatgtagatctttcaatatgaactg 7883284  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaa 201  Q
     || ||||| | ||||| ||| ||||||||||| ||||||||| ||| ||||||||||||||| | |||||||||||||| || |||||||||| |||||    
T  7883285 aacaaacaccgcgacaagacgtgaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagatgacgaaatcacaaaaaacacaa-aagaa 7883383  T
Q  202 aaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaaga-ggaaaaaagatgtag-cgggtgattttaggtcaaaaatgacctaaaacca 297  Q
    ||||| |||| |||||||||||||       |||  || |||||||| |||||||||||||||  |||||||| ||| ||||||||||||||||||||    
T  7883384 aaacttgatagatgtgaaaaccac-ttatttagattgaaagaaaagagggaaaaaagatgtagaggggtgattatagatcaaaaatgacctaaaacca 7883480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 4 - 225
Target Start/End: Complemental strand, 23230788 - 23230566
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  |||||||| |||| |||||||||||| |||| |||||| || || || ||||||| |||||| |||||| ||||||||||||    
T  23230788 taagtcaccgaaatacccatgcttccggatctgcaacgttgacgcccaagtcattggttgaatttgtaattgactgatgtagatcttccaataggaacta 23230689  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaa 202  Q
     || ||||| | ||||| ||||||||||||||| ||||||||| ||| ||||||| | ||||| | ||||| |||||||| |||||||||||| |  |||    
T  23230688 aacaaacaccgcgacaagacgcgaaatcaaacgccgcacaagacgacgaacaacaaatcgccgcacttagacgacgaaatcacaaaaacacaaaagaaaa 23230589  T
Q  203 aactcgatatatgtgaaaaccac 225  Q
    |||| |||| || ||||||||||    
T  23230588 aacttgatagatatgaaaaccac 23230566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 40619014 - 40619307
Alignment:
Q  1 atttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaa 100  Q
    |||||||||  |||||| || |||||||  |||| |||||||||||| |||||| ||||||| || || ||||||| |  ||||||||||| |||| |||    
T  40619014 atttaagtctgcgaaatactcatgcttctggatctgcaacgttgacgcccaaattattgattgaatttgtaattgactattgtcgatctttgaataagaa 40619113  T
Q  101 ctatacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataa 198  Q
    ||| | ||||| || || || || |||||||||||||| ||||||| ||| ||||||||||||||| | ||||| || ||||| || |||||||||| ||    
T  40619114 ctaaatgaacaccgcgataagacacgaaatcaaacgtcacacaagacgacaaacaacacaacgccgcacttagacgatgaaatcacaaaaaacacaaaaa 40619213  T
Q  199 gaaaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtagcggg-tgattttaggtcaaaaatgacctaaa 293  Q
    |||||||| |||||||||||||| |||       |||  || |||||||| ||||||| |||||| ||| ||||| ||||||||||||||||||||    
T  40619214 gaaaaacttgatatatgtgaaaatcac-ttatttagattgatagaaaaga-gaaaaaatatgtagagggatgattctaggtcaaaaatgacctaaa 40619307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 37971428 - 37971242
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| || ||| |||| |||| |||||||||||||||||||||||| || || || ||||||| |||||| ||||||||||||||||||     
T  37971428 taagtcaccgaaatactcatgtttccggatctgcaacgttgacgtccaaatcattgcttgaatttgtaattgattgatgtagatctttcaataggaactg 37971329  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaa 189  Q
     || |||| |  || |||| ||||||||||||| ||||||||| ||| ||||||| ||||||| | ||||| |||||||| ||||||    
T  37971328 aacaaacaccacgaaaaaaagcgaaatcaaacgccgcacaagacgacgaacaacaaaacgccgcacttagacgacgaaatcacaaaa 37971242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 3 - 325
Target Start/End: Complemental strand, 3673587 - 3673267
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||| ||||| || |||||||| |||| |||||||||||| ||||| ||||||||| | || ||||||| |||||||||||||||||||||||||    
T  3673587 ttaagtcactgaaatactcatgcttccggatctgcaacgttgacgcccaaagcattgatttgatttgtaattgactgatgtcgatctttcaataggaact 3673488  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa-cacaataaga 200  Q
    | | ||||| ||  |||| || |||||||||||  |||| |||| ||| ||||||||||| ||| | ||||| |||||||| |||||||  |||| | ||    
T  3673487 aaaggaacaccgcaacaagacacgaaatcaaacaccgcataagacgacgaacaacacaacaccgcacttagacgacgaaatcacaaaaagaacaaaagga 3673388  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtagcggg-tgattttaggtcaaaaatgacctaaaaccatc 299  Q
    || |||   ||||||||| ||||||       |||  || ||||||| ||  ||||||||||| ||| ||||| |||||||||||||||||||||||| |    
T  3673387 aacact---tatatgtgataaccac-ttatttagattgaaagaaaag-gggcaaaagatgtagagggatgattctaggtcaaaaatgacctaaaaccaac 3673293  T
Q  300 ccttctcgacgaatgaaagagaaaga 325  Q
    |||  |||| |||| || ||||||||    
T  3673292 cctcttcgatgaataaaggagaaaga 3673267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 45445755 - 45445979
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||| ||||||  |||||||| |||   ||||||||||| ||||||||||| || || || ||||||| ||||| ||||||||||||||||| ||    
T  45445755 taagtcaccaaaattcacatgcttccggattttcaacgttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaataggaaata 45445854  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataa--ga 200  Q
     || |||| || ||||||| ||||||||||||| ||||||||| ||| ||||| |||||| |||| ||||| |||||||| | ||||||| || ||   |    
T  45445855 aacaaacaccgcgacaaaatgcgaaatcaaacgccgcacaagacgacgaacaatacaacgtcgtacttagacgacgaaatcaaaaaaacaaaaaaaagaa 45445954  T
Q  201 aaaactcgatatatgtgaaaaccac 225  Q
    |||||| ||||| ||||||||||||    
T  45445955 aaaacttgatatgtgtgaaaaccac 45445979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 190
Target Start/End: Complemental strand, 10377835 - 10377647
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||| ||||||| |  |||||||| |||| |||||||||| ||||||||||||| || || || ||||||| |||||| ||||||||||||||||||    
T  10377835 ttaagtcgccgaaatacccatgcttccggatctgcaacgttgatgtccaaatcattggttgaatttataattgactgatgtagatctttcaataggaact 10377736  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
      || |||| |  ||||||||||||||||||||| ||||||||| | | ||||||||||||||| | |||||  ||||||| |||||||    
T  10377735 gaacaaacaccacgacaaaacgcgaaatcaaacgccgcacaagacggcgaacaacacaacgccgcacttagacaacgaaatcacaaaaa 10377647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 222
Target Start/End: Original strand, 7677227 - 7677445
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||||||||  | |||||||| |||| ||||||||||||  |||||||||| |  ||  | ||||||| |||||| ||| ||||| ||||||| |    
T  7677227 taagtcaccgaaatattcatgcttccggatctgcaacgttgacgctcaaatcattggtcgaatctgtaattgactgatgttgatatttcagtaggaacca 7677326  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaa 202  Q
     |||||||| | ||||| ||||||||||||| |  |||||||| ||| ||||||||||||||| ||||||| || ||||| |||||||||||| ||  ||    
T  7677327 aacgaacaccgcgacaagacgcgaaatcaaatgcagcacaagacgacgaacaacacaacgccgcaattagacgatgaaatcacaaaaacacaa-aaacaa 7677425  T
Q  203 aactcgatatatgtgaaaac 222  Q
    |||| |||||||||||||||    
T  7677426 aacttgatatatgtgaaaac 7677445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 182
Target Start/End: Original strand, 17693558 - 17693737
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||| |||||| || |||||||| |||| |||| ||||||| ||||||||||| || || || ||||||| |||||||||||||| |||||||||||    
T  17693558 taagtcatcgaaatactcatgcttccggatctgcaatgttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatcttttaataggaacta 17693657  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaat 182  Q
     || |||| || |||||||||| |||||||||| ||||||||| ||| ||||| ||||| ||| | ||||| ||||||||    
T  17693658 aacaaacaccgcgacaaaacgcaaaatcaaacgccgcacaagaagacgaacaatacaacaccgcacttagacgacgaaat 17693737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 20553185 - 20553372
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| || |||||||| |||| |||||||||||||||||||||||| || || || ||||||| |||| | ||||||||||||||||||     
T  20553185 taagtcaccgaaatactcatgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttgtaattgattgatatagatctttcaataggaactg 20553284  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
     || |||| || ||||| || | |||||||||| |||| |||| ||| ||||||| ||||||| | ||||| |||||||| |||||||    
T  20553285 aacaaacaccgcgacaagacacaaaatcaaacgccgcataagacgacgaacaacaaaacgccgcacttagacgacgaaatcacaaaaa 20553372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 16247167 - 16247351
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||| |||||| |  |||||||| |||| ||||| |||| | |||||||||||||| || || ||||| | ||||||||||||||| ||||||||||    
T  16247167 taagtcagcgaaatacccatgcttccggatctgcaacattgatgcccaaatcattgattgaatttgtaattaattgatgtcgatctttccataggaacta 16247266  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaa 187  Q
     ||||||| || ||||| ||| ||||||||||||||||||||| ||  ||||||||||||||| | ||||| || ||||| ||||    
T  16247267 aacgaacaccgcgacaagacgtgaaatcaaacgtcgcacaagacgatgaacaacacaacgccgcacttagacgaagaaatcacaa 16247351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 24186602 - 24186822
Alignment:
Q  1 atttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaa 100  Q
    ||||||||||| ||||| |  |||||| | |||| |||||||||||| |||||| ||||||| ||||| ||||||| ||||||| ||| |||||||||||    
T  24186602 atttaagtcactgaaatacccatgctttcggatctgcaacgttgacgcccaaattattgattgaacttataattgactgatgtcaatc-ttcaataggaa 24186700  T
Q  101 ctatacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataag 199  Q
    ||| ||||||| |  ||||||||||||||||||| | | |||||||  |||||||||||||| ||  |||||||  || |||| | ||| |||||| |      
T  24186701 ctaaacgaacatcacgacaaaacgcgaaatcaaatgccacacaagacaactaacaacacaacaccacaattagactacaaaatcaaaaacacacaaaagc 24186800  T
Q  200 aaaaactcgatatatgtgaaaa 221  Q
    ||||||| ||||||| ||||||    
T  24186801 aaaaacttgatatatatgaaaa 24186822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 20559688 - 20559875
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| || |||||||| |||| |||||||||||||||||||||||| || || || ||||||| |||| | ||||||||||||||||||     
T  20559688 taagtcaccgaaatactcatgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttgtaattgattgatatagatctttcaataggaactg 20559787  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
     || |||| || | ||| || | |||||||| | ||||||||| ||| ||||||| ||||  | | ||||| |||||||| |||||||    
T  20559788 aacaaacaccgcgccaagacacaaaatcaaaggccgcacaagacgacgaacaacaaaacgatgcacttagacgacgaaatcacaaaaa 20559875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 20571250 - 20571437
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| || |||||||| |||| |||||||||||||||||||||||| || || || ||||||| |||| | ||||||||||||||||||     
T  20571250 taagtcaccgaaatactcatgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttgtaattgattgatatagatctttcaataggaactg 20571349  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
     || |||| || | ||| || | |||||||| | ||||||||| ||| ||||||| ||||  | | ||||| |||||||| |||||||    
T  20571350 aacaaacaccgcgccaagacacaaaatcaaaggccgcacaagacgacgaacaacaaaacgatgcacttagacgacgaaatcacaaaaa 20571437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 141
Target Start/End: Original strand, 31013551 - 31013690
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||| ||||| |  ||||||||  ||| ||||||||||||||||||||||||||| || |||||||||| |||||| ||| ||||||||||||||    
T  31013551 ttaagtcactgaaatacacatgcttccgaatctgcaacgttgacgtccaaatcattgattgaatttttaattgactgatgtagatatttcaataggaact 31013650  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcac 141  Q
      || |||| || ||||| | ||||||||||||| |||||    
T  31013651 gaacaaacaccgcgacaagatgcgaaatcaaacgccgcac 31013690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 25191009 - 25191198
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaat--cattgatttaacttttaattgaatgatgtcgatctttcaataggaac 101  Q
    ||||||| || |||||  |||||||| ||||  ||||||||||| ||||||  ||||| || || |  ||||||| |||||  ||||||||||||||||     
T  25191009 taagtcatcgcaattcacatgcttccggatcttcaacgttgacgcccaaatatcattggttgaattcataattgactgatgctgatctttcaataggaaa 25191108  T
Q  102 tatacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
    || || ||||| | ||||||| ||||||||||||| ||||||||| ||| ||||||||||||| ||| |||||  ||||||| |||||||    
T  25191109 taaacaaacaccgcgacaaaaagcgaaatcaaacgccgcacaagacgacgaacaacacaacgctgtacttagacaacgaaattacaaaaa 25191198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 40211247 - 40211433
Alignment:
Q  5 aagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactat 104  Q
    |||||| |||||| || |||||||| ||||  ||||||||||| ||||||||||| |  || || |||| || |||||| ||||||||||||| |||||     
T  40211247 aagtcaacgaaatactcatgcttccggatctacaacgttgacgcccaaatcattggtggaatttgtaatcgactgatgtagatctttcaatagaaactaa 40211346  T
Q  105 acgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
    || |||| || ||||| ||||||||||||||   ||| |||| ||| ||||||||||||||  | ||||| |||||||| |||||||    
T  40211347 acaaacaccgcgacaatacgcgaaatcaaacactgcataagacgacgaacaacacaacgccacatttagacgacgaaatcacaaaaa 40211433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 190
Target Start/End: Original strand, 28086784 - 28086944
Alignment:
Q  31 gatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaaacgcgaaat 129  Q
    |||| ||||||||||| ||||||||||||||| || || ||||| | ||| ||||||||||||| | ||| |  | |||||| | ||||| |||||||||    
T  28086784 gatctgcaacgttgacttccaaatcattgattgaatttgtaattaactgaagtcgatctttcaacaagaattgaatgaacactgcgacaagacgcgaaat 28086883  T
Q  130 caaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
    |||| |  |||||||||||| ||||||||||||| | | ||||| |||||||| |||||||    
T  28086884 caaatgctgcacaagatgacgaacaacacaacgcagcacttagacgacgaaatcacaaaaa 28086944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 33214615 - 33214747
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||| ||||||||  |||||||| |||| |||||||||| | ||||||||||| || || || ||||||| ||| | ||||||||||||||||||||    
T  33214615 taagtcatcgaaattcacatgcttccggatctgcaacgttgaagcccaaatcattggttgaatttgtaattgactgacgccgatctttcaataggaacta 33214714  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacg 135  Q
     | ||||| |  ||||| |||||||||||||||    
T  33214715 aaagaacaccacgacaagacgcgaaatcaaacg 33214747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 51 - 225
Target Start/End: Original strand, 36948428 - 36948605
Alignment:
Q  51 aaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgac 149  Q
    |||||||||||| || || ||||||| ||||||| || |||||||||||| || || ||||| | ||||| ||||||||||||||| |||||| || |||    
T  36948428 aaatcattgattgaatttgtaattgactgatgtcaatttttcaataggaattaaacaaacaccgcgacaagacgcgaaatcaaacgccgcacaggacgac 36948527  T
Q  150 taacaacacaacgccgtaattagatgacgaa--ataacaaaaacacaataagaaaaactcgatatatgtgaaaaccac 225  Q
     |||||||||||||   | ||||| || |||  | || |||||||||| | |||||| | ||||||| ||||||||||    
T  36948528 aaacaacacaacgcaacacttagacgatgaaacaaaaaaaaaacacaaaaggaaaaatttgatatatatgaaaaccac 36948605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 16928701 - 16928794
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaatag 97  Q
    |||||||||||||| |  | |||| | |||| |||||||||| ||||||||||||| || || || ||||||| ||||||||||||||||||||    
T  16928701 taagtcaccgaaatacccacgctttcggatctgcaacgttgatgtccaaatcattggttgaatttgtaattgactgatgtcgatctttcaatag 16928794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 56 - 225
Target Start/End: Original strand, 44091749 - 44091915
Alignment:
Q  56 attgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacacgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaa 155  Q
    ||||||| || || || |||| ||||||||||||||||| |||||||| ||||||||    ||  |||| ||||||||||||  |||||| ||  || ||    
T  44091749 attgattgaatttgtatttgattgatgtcgatctttcaacaggaactaaacgaacac----cacgacgcaaaatcaaacgtcagacaagacgaagaataa 44091844  T
Q  156 cacaacgccgtaattagatgacgaaataacaaa-aacacaataagaaaaactcgatatatgtgaaaaccac 225  Q
    |||||| | | | |||||| ||||||| ||||| ||||||| | |||||||| |||| |||||||||||||    
T  44091845 cacaacactgcatttagataacgaaatcacaaataacacaaaaggaaaaacttgatagatgtgaaaaccac 44091915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 320
Target Start/End: Original strand, 14916344 - 14916399
Alignment:
Q  265 gggtgattttaggtcaaaaatgacctaaaaccatcccttctcgacgaatgaaagag 320  Q
    |||||||| |||||||||||||||||||||||| |||| ||||| |||||||||||    
T  14916344 gggtgattctaggtcaaaaatgacctaaaaccacccctcctcgaagaatgaaagag 14916399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 9637353 - 9637511
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||| |||||||| || ||| ||||  ||| ||||||||||||  ||||||||| |||    || ||||| | |||||| |||||||||||||||||||    
T  9637353 taagttaccgaaatactcatgtttccgaatctgcaacgttgacgctcaaatcattaattgtgtttgtaattaactgatgttgatctttcaataggaacta 9637452  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaac 161  Q
     ||||| || |  | || ||||||||||||| |||| |||||| ||| |||||||||||    
T  9637453 aacgaatactgcaataagacgcgaaatcaaatgtcgtacaagacgacgaacaacacaac 9637511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 85 - 221
Target Start/End: Original strand, 27498389 - 27498527
Alignment:
Q  85 gatctttcaataggaactatacgaacacgt-gacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaata 183  Q
    |||||||||||||||| || | ||||||   ||||| ||||||||||||| ||||||||||| ||| |||||||||| | |  | ||||| ||||||||     
T  27498389 gatctttcaataggaattaaatgaacaccacgacaagacgcgaaatcaaatgtcgcacaagacgacgaacaacacaatggcacacttagacgacgaaatt 27498488  T
Q  184 acaaaa-acacaataagaaaaactcgatatatgtgaaaa 221  Q
    |||||| ||| || | |||||||| ||||||||| ||||    
T  27498489 acaaaatacataaaaggaaaaacttgatatatgtaaaaa 27498527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 161
Target Start/End: Original strand, 29617245 - 29617379
Alignment:
Q  31 gatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaaacgcgaaat 129  Q
    |||| ||||||||||||||||||||||||||| ||  | | ||||| ||| || | |||||||||| |||| | ||||||| ||  |||| |||||||||    
T  29617245 gatctgcaacgttgacgtccaaatcattgattgaatctgtgattgactgaagttggtctttcaataagaaccaaacgaacaccgcaacaagacgcgaaat 29617344  T
Q  130 caaa---cgtcgcacaagatgactaacaacacaac 161  Q
    ||||   || ||||||||| ||| |||||||||||    
T  29617345 caaacagcgccgcacaagacgacgaacaacacaac 29617379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 8981079 - 8981021
Alignment:
Q  265 gggtgattttaggtcaaaaa-tgacctaaaaccatcccttctcgacgaatgaaagagaa 322  Q
    |||||||||||||||||||| ||||||||||||| |||| |||||||| |||| |||||    
T  8981079 gggtgattttaggtcaaaaaatgacctaaaaccacccctcctcgacgagtgaatgagaa 8981021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 325
Target Start/End: Original strand, 31013753 - 31013839
Alignment:
Q  241 agaaaagaggaaaaaagatgtagcggg-tgattttaggtcaaaa-atgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    ||||||| || |||||||||||| ||| ||||| |||||||||| |||||||||||||| |||| ||||| ||| ||| ||||||||    
T  31013753 agaaaagggggaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaaga 31013839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 322
Target Start/End: Complemental strand, 15344210 - 15344130
Alignment:
Q  244 aaagaggaaaaaagatgtagcggg-tgattttaggtcaaa-aatgacctaaaaccatcccttctcgacgaatgaaagagaa 322  Q
    |||| |||||||||||| || ||| | ||||||||||||| ||||||||||||||| |||| ||||| || ||||||||||    
T  15344210 aaaggggaaaaaagatgcagaggggtaattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaa 15344130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 322
Target Start/End: Complemental strand, 15433275 - 15433195
Alignment:
Q  244 aaagaggaaaaaagatgtagcggg-tgattttaggtcaaa-aatgacctaaaaccatcccttctcgacgaatgaaagagaa 322  Q
    |||| |||||||||||| || ||| | ||||||||||||| ||||||||||||||| |||| ||||| || ||||||||||    
T  15433275 aaaggggaaaaaagatgcagaggggtaattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaa 15433195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 322
Target Start/End: Complemental strand, 15524579 - 15524499
Alignment:
Q  244 aaagaggaaaaaagatgtagcggg-tgattttaggtcaaa-aatgacctaaaaccatcccttctcgacgaatgaaagagaa 322  Q
    |||| |||||||||||| || ||| | ||||||||||||| ||||||||||||||| |||| ||||| || ||||||||||    
T  15524579 aaaggggaaaaaagatgcagaggggtaattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaa 15524499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 17693805 - 17693881
Alignment:
Q  250 gaaaaaagatgtagcggg-tgattttaggtcaaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    |||||||||||||| ||| ||||| |||||||||||||||||||||| | |||| ||| | ||| ||| ||||||||    
T  17693805 gaaaaaagatgtagagggatgattctaggtcaaaaatgacctaaaacaacccctcctcaatgaacgaaggagaaaga 17693881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 24099469 - 24099528
Alignment:
Q  265 gggtgattttaggtcaaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    |||||||| |||||||||||||||||||| ||| |||| ||||| || |||||||||||||    
T  24099469 gggtgattctaggtcaaaaatgacctaaagcca-ccctactcgatgattgaaagagaaaga 24099528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 221
Target Start/End: Original strand, 18890670 - 18890869
Alignment:
Q  31 gatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacacgtgacaa-----aacgcg 125  Q
    |||| |||||||||||| |||||||||||||| || || | ||||  ||| |  |||||||||||| |||| | ||||||||   ||||     || |||    
T  18890670 gatctgcaacgttgacgcccaaatcattgattgaatttgtgattgtctgaagctgatctttcaatacgaaccaaacgaacaccacacaacaaaaaatgcg 18890769  T
Q  126 aaatcaaac---gtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac--aaaaacacaataagaaaaactcgatatatgtgaaa 220  Q
    |||||||||   ||||||||||| ||| |||||||||||| || | | ||| |||||||| ||  |||||||||| |||||||||| |||  ||||||||    
T  18890770 aaatcaaacaacgtcgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcacgaaaaaacacaa-aagaaaaacttgatgcatgtgaaa 18890868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 37971199 - 37971141
Alignment:
Q  241 agaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaacca 297  Q
    ||||||| |||||||||||||||  |||||||| |||||| ||||||||||||||||||    
T  37971199 agaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaacca 37971141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 29938021 - 29937964
Alignment:
Q  241 agaaaagaggaaaaaagatgtagcggg-tgattttaggtcaaaaatgacctaaaacca 297  Q
    |||||||  |||||||||||||| ||| ||||| |||||||||||||| |||||||||    
T  29938021 agaaaaggcgaaaaaagatgtagaggggtgattctaggtcaaaaatgatctaaaacca 29937964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 7198157 - 7198197
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatt 62  Q
    |||||||| |||| ||||||||||| |||||||||||||||    
T  7198157 atgcttccggatctgcaacgttgacatccaaatcattgatt 7198197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 39657581 - 39657541
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatt 62  Q
    |||||||  |||| |||||||||||||||||||||||||||    
T  39657581 atgcttctggatctgcaacgttgacgtccaaatcattgatt 39657541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 41684496 - 41684412
Alignment:
Q  78 tgatgtcgatctttcaataggaactatacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaac 161  Q
    |||||||| ||||||||||||||||| | | ||| || ||||| ||||||| ||||| |||| |||||| ||  |||||||||||    
T  41684496 tgatgtcggtctttcaataggaactaaatggacaccgcgacaagacgcgaattcaaatgtcgtacaagacgatgaacaacacaac 41684412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 43833958 - 43833998
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatt 62  Q
    ||||||| ||||| |||||||||||||| ||||||||||||    
T  43833958 atgcttctagatctgcaacgttgacgtctaaatcattgatt 43833998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 4e-63; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 4 - 325
Target Start/End: Complemental strand, 8809433 - 8809111
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||| |||||||| |||||||| |||| |||| |||| || |||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||    
T  8809433 taagtcactgaaattctcatgcttccggatctgcaatgttggcgcccaaatcattgattgaacttgtaattgactgatgtcgatctttcaataggaacta 8809334  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaa 202  Q
    | |||||| || ||||| ||||||||||||  | ||||||||| |||||||||||| ||| || ||||||| |||||||| |||||||||||| | ||||    
T  8809333 tgcgaacaccgcgacaagacgcgaaatcaattgccgcacaagacgactaacaacacgacgtcgcaattagacgacgaaattacaaaaacacaaaaggaaa 8809234  T
Q  203 aactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtcaaaaatgacctaaaaccatccc 301  Q
    ||||  ||||||||| || ||||        ||  || |||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||| |      
T  8809233 aacttaatatatgtgcaagccacttatttt-gattgaaagaaaagaggaaaaaagatgtagaggggtgattttaggtcaaaaatgatctaaaaccacctg 8809135  T
Q  302 ttctcgacgaatgaaagagaaaga 325  Q
    | ||||||| ||||| ||||||||    
T  8809134 tcctcgacgtatgaaggagaaaga 8809111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 31128727 - 31128949
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||| ||||| || |||||||| |||| |||||||||||| | |||||||||||| || || ||||||| |||| ||||| |||||||||||||||    
T  31128727 taagtcactgaaatactcatgcttccggatctgcaacgttgacgcctaaatcattgattgaatttgtaattgactgatatcgatttttcaataggaacta 31128826  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaa 202  Q
     |||||||| | ||||| | ||| ||||||||| | ||||||| ||||||||||||||||||| ||||| |||||||||| |||||||||||| | ||||    
T  31128827 aacgaacaccgcgacaagaagcggaatcaaacgccacacaagacgactaacaacacaacgccgcaattaaatgacgaaatcacaaaaacacaaaaggaaa 31128926  T
Q  203 aactcgatatatgtgaaaaccac 225  Q
    |||| ||||||||||||||||||    
T  31128927 aacttgatatatgtgaaaaccac 31128949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 325
Target Start/End: Original strand, 9169204 - 9169527
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| |  |||||||| |||| |||||||||||||||||||||||  || || || ||||| | |||||| |||||||||| ||||||     
T  9169204 ttaagtcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattcgttgaatttgtaattcactgatgtagatctttcaagaggaacc 9169303  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaa 201  Q
      || |||| || | ||||||| ||||||||||| |||||||||  || ||||||||||||||| | ||||| |||||||| |||||||||||| | |||    
T  9169304 gaacaaacatcgcggcaaaacgtgaaatcaaacgacgcacaagacaacgaacaacacaacgccgcacttagacgacgaaatcacaaaaacacaaaaggaa 9169403  T
Q  202 aaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtcaaaaatgacctaaaaccatcc 300  Q
    ||||| |||| |||||||||||||       |||  || ||||||| | |||||| ||||||  |||||||| |||||||||||||||||||||||| ||    
T  9169404 aaacttgatagatgtgaaaaccac-ttatttagattgaaagaaaagggaaaaaaaaatgtagaggggtgattctaggtcaaaaatgacctaaaaccaccc 9169502  T
Q  301 cttctcgacgaatgaaagagaaaga 325  Q
    || |||||  || ||| ||||||||    
T  9169503 ctcctcgataaacgaatgagaaaga 9169527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 325
Target Start/End: Original strand, 27097353 - 27097675
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||| || || || ||||||| |||||| |||||||||| |||||||    
T  27097353 ttaagtcaccgaaatacc-atgcttccagatctgcaacgttgacgtccaaatcattggttgaatttgtaattgactgatgtagatctttcaagaggaact 27097451  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaat-aacaaaaacacaataaga 200  Q
      || |||| || ||||||| | ||||||||| | ||||||||| ||| ||||||||||||||| | ||||| |||||||| |  |||||||||| | ||    
T  27097452 gaacaaacaccgcgacaaaaggtgaaatcaaatgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcagaaaaaacacaaaagga 27097551  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtagcgggtgattttaggtc-aaaaatgacctaaaaccatc 299  Q
    |||||| ||||  |||| ||| |||       ||| | | ||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||| || |    
T  27097552 aaaacttgatagttgtg-aaatcac-ttatttagatcaaaagaaaaggggaaaaaagatgtagagggtgattctaggtcaaaaaatgacctaaaatcacc 27097649  T
Q  300 ccttctcgacgaatgaaagagaaaga 325  Q
    ||| ||||| ||| ||| ||||||||    
T  27097650 cctcctcgatgaacgaaggagaaaga 27097675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 297
Target Start/End: Complemental strand, 38445320 - 38445024
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| |  | |||||| |||| |||||||||||||||||||||||| || || || ||||| | |||||| ||||||||||||||||||    
T  38445320 ttaagtcaccgaaatacccacgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaatttactgatgtagatctttcaataggaact 38445221  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
      || |||| || || |||||||||||||||||| ||||||||| ||| ||||||||||||| | | ||||| |||||||| || |||||||||| |  |    
T  38445220 gaacaaacaccgcgataaaacgcgaaatcaaacgccgcacaagacgacgaacaacacaacgctgcacttagacgacgaaatcacaaaaaacacaaaagaa 38445121  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtcaaaaatgacctaaaacca 297  Q
    |||||| |||| |||||||||||||       | |  || ||||||  |||||||||||||||  |||||||| ||| ||||||||||||||||||||    
T  38445120 aaaacttgatagatgtgaaaaccac-ttatttatattgaaagaaaaagggaaaaaagatgtagaggggtgattctagatcaaaaatgacctaaaacca 38445024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 325
Target Start/End: Complemental strand, 7646632 - 7646301
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaat-----cattgatttaacttttaattgaatgatgtcgatctttcaatag 97  Q
    ||||||||||||||| || |||||||| |||| |||||||||||||||||||     |||||||| || || ||||||| |||||| |||||||||| |     
T  7646632 ttaagtcaccgaaatactcatgcttccggatctgcaacgttgacgtccaaattaaatcattgattgaatttgtaattgactgatgtagatctttcaaaaa 7646533  T
Q  98 gaactatacgaacacgt-gacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataaca-aaaacacaa 195  Q
    ||| |  || |||||   ||||||||||||||||||||| ||||||||| ||| ||||||| ||||||| | ||||| |||||||| ||| |||||||||    
T  7646532 gaattgaacaaacaccacgacaaaacgcgaaatcaaacgccgcacaagacgacgaacaacataacgccgcacttagacgacgaaatcacagaaaacacaa 7646433  T
Q  196 taagaaaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagagg-aaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaa 292  Q
     | |||||||| | || |||||||||||||       ||| ||| ||||||| || |||||||||||||  |||||||| |||||| |||||||||||||    
T  7646432 aaggaaaaacttggtagatgtgaaaaccac-ttatttagatcgaaagaaaaggggaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaa 7646334  T
Q  293 aaccatcccttctcgacgaatgaaagagaaaga 325  Q
    ||||| |||| ||||| ||| ||| ||||||||    
T  7646333 aaccacccctcctcgatgaacgaaggagaaaga 7646301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 4 - 190
Target Start/End: Complemental strand, 1415710 - 1415523
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||||||||||  |||||||| ||||  ||||||||||| ||||||||||| || || || ||||||| ||||| ||||||||||||||||| ||    
T  1415710 taagtcaccgaaattcacatgcttccggatcttcaacgttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaataggaaata 1415611  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
     || |||| || ||||||||||||||||||||| ||||||||| ||  |||||||||||| |||| ||||| |||||||| |||||||    
T  1415610 aacaaacaccgcgacaaaacgcgaaatcaaacgccgcacaagacgaagaacaacacaacgtcgtacttagacgacgaaatcacaaaaa 1415523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 3 - 224
Target Start/End: Complemental strand, 7448401 - 7448178
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||| ||||| || |||||||| |||| ||||||||||||||||||| |||| || ||  | ||||||| |||||| |||||||||| ||| |||    
T  7448401 ttaagtcactgaaatactcatgcttccggatctgcaacgttgacgtccaaattattggttgaatatgtaattgactgatgtagatctttcaagaggcact 7448302  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
      || |||| || ||||||||||||||||||||| ||||||||| ||| ||||||||||||||| | |||||  ||||||| || |||||||||| | ||    
T  7448301 gaacaaacatcgcgacaaaacgcgaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacaacgaaatcacaaaaaacacaaaagga 7448202  T
Q  201 aaaactcgatatatgtgaaaacca 224  Q
    |||||| |||| ||||||||||||    
T  7448201 aaaacttgatagatgtgaaaacca 7448178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 325
Target Start/End: Complemental strand, 4778907 - 4778582
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| |  |||||||| |||| |||||||||||||||||||||||| || || || ||||||| |||||| |||||||||| ||||| |    
T  4778907 ttaagtcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgactgatgtagatctttcaagaggaatt 4778808  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaat-aacaaaaacacaataaga 200  Q
      |  |||| || || ||||||||||||||||||  |||||||| ||| || |||||||||||| | ||| | |||||||| || ||||||||||   ||    
T  4778807 gaataaacaccgcgagaaaacgcgaaatcaaacgctgcacaagacgacgaataacacaacgccgcacttaaacgacgaaatcaaaaaaaacacaaaggga 4778708  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccat 298  Q
    |||||| |||| |||||||||||||       | |  || ||||||| | |||||||||||||  |||||||| |||||| ||||||||||||||||||     
T  4778707 aaaacttgatagatgtgaaaaccacttatttaa-attgaaagaaaagggaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 4778609  T
Q  299 cccttctcgacgaatgaaagagaaaga 325  Q
    |||| ||||| ||| ||| ||||||||    
T  4778608 ccctcctcgatgaacgaaggagaaaga 4778582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 190
Target Start/End: Complemental strand, 18763621 - 18763434
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||||||||||  |||||||| |||| | |||||||||| |||||| |||| || || || ||||||| ||||| ||||||||||||||||||||    
T  18763621 taagtcaccgaaattcacatgcttccggatctgtaacgttgacgcccaaatgattggttgaatttgtaattgattgatgccgatctttcaataggaacta 18763522  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
     ||||||| ||||| || ||||||||||||||| ||||||||| ||| ||||||||||| ||| | ||||| || ||||| |||||||    
T  18763521 aacgaacaccgtgataagacgcgaaatcaaacgccgcacaagacgacgaacaacacaacaccgcacttagacgatgaaatcacaaaaa 18763434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 5 - 325
Target Start/End: Original strand, 36943069 - 36943394
Alignment:
Q  5 aagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactat 104  Q
    ||||||||||||| |  ||| |||| |||| |||||||||||| ||||||||||| |  || || |||| || | |||| ||||||||||| |||||||     
T  36943069 aagtcaccgaaatacccatgtttccggatctgcaacgttgacgcccaaatcattggtggaatttgtaatcgactaatgtagatctttcaattggaactaa 36943168  T
Q  105 acgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacaca---ataaga 200  Q
    || ||||| | ||||| ||||||||||||||| ||||||||| ||| ||||||||||||||| | ||||| |||||||| ||||||| | |   | || |    
T  36943169 acaaacaccgcgacaatacgcgaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaaaaaaacaaaaaa 36943268  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtagcg-ggtgattttaggtc-aaaaatgacctaaaaccat 298  Q
    |||||| |||| |||||||||| ||       |||  || ||||||||||||||||||||||| | ||||||| |||||| ||||||||||||||||||     
T  36943269 aaaacttgatagatgtgaaaactac-ttatttagattgaaagaaaagaggaaaaaagatgtagagtggtgattctaggtcaaaaaatgacctaaaaccac 36943367  T
Q  299 cccttctcgacgaatgaaagagaaaga 325  Q
    |||| |||||  || ||| ||||||||    
T  36943368 ccctcctcgatcaacgaaggagaaaga 36943394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 29279514 - 29279740
Alignment:
Q  1 atttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaa 100  Q
    ||||||||||||||||  || ||| |||| |||| ||||| ||||||  ||||||||||||| || || |||| || |||||| |||| |||||  ||||    
T  29279514 atttaagtcaccgaaaaactcatgtttccggatctgcaacattgacgcacaaatcattgattgaatttgtaatcgactgatgttgatcattcaacgggaa 29279613  T
Q  101 ctatacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataa 198  Q
    ||| || || || | ||||| || |||||||||| ||||| ||||| ||||| ||||||||||||| ||||||| |||||||| || |||||||||| |     
T  29279614 ctaaactaataccgcgacaagacacgaaatcaaatgtcgcccaagacgactaccaacacaacgccgcaattagacgacgaaatcacaaaaaacacaaaag 29279713  T
Q  199 gaaaaactcgatatatgtgaaaaccac 225  Q
    |||||||| ||||||||||||||||||    
T  29279714 gaaaaacttgatatatgtgaaaaccac 29279740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 35220481 - 35220256
Alignment:
Q  1 atttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaa 100  Q
    ||||||||||| ||||| |  ||||||  ||||| |||| ||||||| ||||||||||| || || || |||| || |||||| ||||||||||||||||    
T  35220481 atttaagtcacagaaatacccatgctttaagatctgcaaagttgacgcccaaatcattggttgaatttgtaatggactgatgttgatctttcaataggaa 35220382  T
Q  101 ctatacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataa 198  Q
    ||| | ||||| ||||||||||||| |||||||||| ||||||||| ||  ||||||| || |||| | ||||| |||||||| || |||||||||| ||    
T  35220381 ctaaatgaacaccgtgacaaaacgcaaaatcaaacgccgcacaagacgatgaacaacataatgccgcacttagacgacgaaatcacaaaaaacacaagaa 35220282  T
Q  199 gaaaaactcgatatatgtgaaaaccac 225  Q
     ||||||| ||| ||||||||||||||    
T  35220281 -aaaaacttgatttatgtgaaaaccac 35220256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 225
Target Start/End: Original strand, 19062298 - 19062522
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| |  |||||| | |||| | ||||||||||||||||||||||||| || || ||||||| |||||| |||||||||| ||||| |    
T  19062298 ttaagtcaccgaaatacccatgctttcggatctgaaacgttgacgtccaaatcattgattgaatttgtaattgactgatgtagatctttcaacaggaatt 19062397  T
Q  103 atacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
      || ||||| ||||||| ||| ||||||||| | ||||||||| ||| ||||||||||||| | | ||||| ||||| || || ||||||| || | ||    
T  19062398 gaacaaacactgtgacaagacgtgaaatcaaatgccgcacaagacgacgaacaacacaacgctgcacttagacgacgatatcacaaaaaacataaaagga 19062497  T
Q  201 aaaactcgatatatgtgaaaaccac 225  Q
    |||||| |||| |||||||||||||    
T  19062498 aaaacttgatagatgtgaaaaccac 19062522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 225
Target Start/End: Original strand, 31210558 - 31210777
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    |||||||||| |  |||||| | |||| |||||||||||||||||||||||| || || || ||||||| |||||| ||||||||||||||||||  ||     
T  31210558 tcaccgaaatacccatgctttctgatctgcaacgttgacgtccaaatcattgcttgaatttgtaattgattgatgtagatctttcaataggaactgaaca 31210657  T
Q  108 aaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaat-aacaaaaacacaataagaaaaac 205  Q
    |||| |  || || ||||||||||||||| |||||||||  || ||||||||||||||| | ||||| |||||||| |  |||||||||| |  ||||||    
T  31210658 aacaccacgataagacgcgaaatcaaacgccgcacaagacaacaaacaacacaacgccgcacttagacgacgaaatcataaaaaacacaaaagaaaaaac 31210757  T
Q  206 tcgatatatgtgaaaaccac 225  Q
    | |||| |||||||||||||    
T  31210758 ttgatagatgtgaaaaccac 31210777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 190
Target Start/End: Complemental strand, 33923858 - 33923671
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||||||||||  |||||||| ||||  ||||||||||| ||||||||||| || || || ||||||| ||||||||||||||||||||||| ||    
T  33923858 taagtcaccgaaattcacatgcttccggatcttcaacgttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcaataggaaata 33923759  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
     || |||| |  || |||||||||||||||||| ||||||||| ||| ||||||| |||  |||| |||||  ||||||| |||||||    
T  33923758 aacaaacaccacgataaaacgcgaaatcaaacgccgcacaagacgacgaacaacagaacatcgtacttagacaacgaaatcacaaaaa 33923671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 22 - 225
Target Start/End: Original strand, 7677838 - 7678041
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaa 120  Q
    |||||| | |||| |||||||||| ||||||||||||| || || || ||||||| |||||| ||||||||||||||||||  || ||||| | || ||     
T  7677838 atgctttcggatctgcaacgttgatgtccaaatcattgcttgaatttgtaattgattgatgtagatctttcaataggaactgaacaaacaccgagataag 7677937  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaactcgatatatgtgaa 219  Q
    ||||||||||||||| ||||||||| ||| ||||||||||||||| | ||||| |||||||| || |||||| ||| | ||||||||  ||| |||||||    
T  7677938 acgcgaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaactcaaaaggaaaaact--atagatgtgaa 7678035  T
Q  220 aaccac 225  Q
    ||||||    
T  7678036 aaccac 7678041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 17994674 - 17994958
Alignment:
Q  1 atttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaa 100  Q
    ||||||||||||||||| | |||| |||| |||  ||||||||||||||||||||||||||| || || |        ||||||||||||||||||| ||    
T  17994674 atttaagtcaccgaaatacctatggttccggatgtgcaacgttgacgtccaaatcattgattgaatttgt--------gatgtcgatctttcaatagaaa 17994765  T
Q  101 ctatacgaacacgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataaga 200  Q
    ||| |||||||| ||| ||  | |||||||||||| |||||||   ||||||||| ||||||||  ||||||| |||||||| ||||||||||||||       
T  17994766 ctaaacgaacacctgaaaaggcacgaaatcaaacgccgcacaa---gactaacaaaacaacgcctcaattagacgacgaaatcacaaaaacacaata--g 17994860  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtagcg-ggtgattttaggtc-aaaaatgacctaaaacca 297  Q
    |||||| ||| | ||||||||||||       |||  || |||||| ||||||||||||| || | |||||||||||| | ||||||||||||||||||    
T  17994861 aaaacttgatttgtgtgaaaaccac-ttattaagattgaaagaaaataggaaaaaagatgcagagaggtgattttagggcaaaaaatgacctaaaacca 17994958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 8 - 225
Target Start/End: Complemental strand, 1421825 - 1421605
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    |||||||||| |  |||||||| |||| |||||||||||||||||||||||| || || || ||||||| |||||| ||||||||||||| ||||  ||     
T  1421825 tcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttgtaattgattgatgtagatctttcaatagaaactggaca 1421726  T
Q  108 aaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaa-aaa 204  Q
    |||| || ||||| |||||||||||||||  |||||||| ||| ||||||| ||| ||| | ||||| |||||||| || |||||||||| || || |||    
T  1421725 aacaccgcgacaagacgcgaaatcaaacgctgcacaagacgacgaacaacataacaccgcacttagacgacgaaatcacaaaaaacacaaaaaaaataaa 1421626  T
Q  205 ctcgatatatgtgaaaaccac 225  Q
     | |||| |||||||||||||    
T  1421625 attgatagatgtgaaaaccac 1421605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 80 - 325
Target Start/End: Complemental strand, 4099180 - 4098932
Alignment:
Q  80 atgtcgatctttcaataggaactatacgaacacgt-gacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacg 178  Q
    |||| ||||||||||||||||||  || |||||   |||||||||| |||||||||| |||||||||  || ||||||||||||||| | ||||| ||||    
T  4099180 atgtagatctttcaataggaactgaacaaacaccacgacaaaacgcaaaatcaaacgccgcacaagacaacgaacaacacaacgccgcacttagacgacg 4099081  T
Q  179 aaataac-aaaaacacaataagaaaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttag 276  Q
    |||| || |||||||||| | |||||||| |||| |||||||||||||       |||  || ||||||| |||||||||||||||  |||||||| |||    
T  4099080 aaattacaaaaaacacaaaaggaaaaacttgatagatgtgaaaaccac-ttatttagattgaaagaaaaggggaaaaaagatgtagatgggtgattctag 4098982  T
Q  277 gtc-aaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    ||| |||||||||||||| ||| || | ||||| ||| ||||||||||||    
T  4098981 gtcaaaaaatgacctaaagccacccttcctcgatgaaggaaagagaaaga 4098932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 36 - 224
Target Start/End: Original strand, 25509047 - 25509233
Alignment:
Q  36 gcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaaacgcgaaatcaaac 134  Q
    |||||||||||| ||| |||||||||| || || ||||||| |||||| ||||||||||| ||||||| ||||||| || ||||| || | |||||||||    
T  25509047 gcaacgttgacgcccagatcattgattgaatttgtaattgactgatgttgatctttcaatgggaactaaacgaacaccgcgacaagacacaaaatcaaac 25509146  T
Q  135 gtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaaacca 224  Q
    ||||||||||| || |||||||||||||| | ||||||| |  ||||| || ||||||||| | |||||||| ||||||| | |||||||    
T  25509147 gtcgcacaagacgaataacaacacaacgctgcaattagacg--gaaattac-aaaacacaaaaggaaaaacttgatatatcttaaaacca 25509233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 4904092 - 4904315
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||||||||    |||||||  |||| |||||||||||  |||||||||   || || || ||||||| ||||||||||||||||||| |||| |    
T  4904092 taagtcaccgaaatatccatgcttctggatctgcaacgttgacacccaaatcatcagttgaatttgtaattgactgatgtcgatctttcaatatgaacca 4904191  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaa 201  Q
     |||||||| |  |||| || | |||||||||||||||||||| ||| ||||||||||||||  | || || |||||||| || |||||||||| |  ||    
T  4904192 aacgaacaccgcaacaagacacaaaatcaaacgtcgcacaagacgacgaacaacacaacgccacactttgacgacgaaatcacaaaaaacacaaaagaaa 4904291  T
Q  202 aaactcgatatatgtgaaaaccac 225  Q
    ||||| ||||||||||||||||||    
T  4904292 aaacttgatatatgtgaaaaccac 4904315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 36 - 206
Target Start/End: Original strand, 19028893 - 19029064
Alignment:
Q  36 gcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaaacgcgaaatcaaac 134  Q
    ||||||||||||  ||||||||||||| || || || |||| ||| |||||||||||||||||||||| | ||||| || ||||| |||||||||||||     
T  19028893 gcaacgttgacgctcaaatcattgattgaatttgtacttgactgaagtcgatctttcaataggaactaaatgaacaccgagacaagacgcgaaatcaaat 19028992  T
Q  135 gtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaact 206  Q
    | |||||| || ||| || |||||||||||| | ||||| |||||||| ||| |||||||| | ||||||||    
T  19028993 gccgcacatgacgacgaataacacaacgccgaacttagacgacgaaatcacataaacacaaaaggaaaaact 19029064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 308
Target Start/End: Original strand, 43397065 - 43397372
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaa-cgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    |||||||| |||||||  |||||||| ||||  ||| |||||||| ||||||||||| || || |  || |||  | ||| ||||||||||||| ||| |    
T  43397065 taagtcactgaaattcacatgcttccggatcttcaaacgttgacgcccaaatcattggttgaattcgtagttggctaatgccgatctttcaatatgaaat 43397164  T
Q  103 atacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac--aaaaacacaataag 199  Q
    | |||||||| | ||||| ||||||||||||||| | ||||||| ||| ||||||||||||||  | ||||| |||||||| ||  |||||||||| |      
T  43397165 aaacgaacaccgcgacaagacgcgaaatcaaacgccacacaagacgacgaacaacacaacgccacacttagacgacgaaatcacgaaaaaacacaaaaga 43397264  T
Q  200 aaaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtagcg-ggtgattttaggtc-aaaaatgacctaaaacca 297  Q
    ||||||| ||||||||||||||||||       |||  || |||||  ||| |||||||||||| | ||||||| |||||| ||||||||||||||||||    
T  43397265 aaaaacttgatatatgtgaaaaccac-ttatttagattgaaagaaa--agggaaaaagatgtagagaggtgattctaggtcaaaaaatgacctaaaacca 43397361  T
Q  298 tcccttctcga 308  Q
     ||||||||||    
T  43397362 ccccttctcga 43397372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 37876550 - 37876739
Alignment:
Q  1 atttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaa 100  Q
    ||||||||||||||||| |  |||||| | |||| |||||||||| | |||| |||||| || || || ||||||| |||||| |||||| |||||||||    
T  37876550 atttaagtcaccgaaatacccatgctttcggatctgcaacgttgatgcccaagtcattggttgaatttgtaattgactgatgtagatcttccaataggaa 37876649  T
Q  101 ctatacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaa 189  Q
    ||| || |||| || ||||| ||||||||||||| | ||||||||| ||| ||||||| ||||||| | ||||| ||| |||| ||||||    
T  37876650 ctaaacaaacaccgcgacaagacgcgaaatcaaatgccgcacaagacgacgaacaacaaaacgccgcacttagacgaccaaatcacaaaa 37876739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 8 - 220
Target Start/End: Complemental strand, 36692023 - 36691808
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    ||||||||||||  ||||||   |||| |||| ||||||||||||||||||| || || || |||||||  |||||| |||||||| ||| ||||| |||    
T  36692023 tcaccgaaattcacatgctttaggatctgcaatgttgacgtccaaatcattgcttgaatttgtaattgaccgatgtcaatctttcagtagaaactaaacg 36691924  T
Q  108 aaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac--aaaaacacaataagaaaaa 204  Q
    |||| || ||||| | ||||||||||||||||||| | | ||  ||||||| ||||||| | ||||| |||||||| ||  |||||||||| |  |||||    
T  36691923 aacaccgcgacaagatgcgaaatcaaacgtcgcactaaacgatgaacaacaaaacgccgcacttagacgacgaaatcacgaaaaaacacaaaagaaaaaa 36691824  T
Q  205 ctcgatatatgtgaaa 220  Q
    || |||||||||||||    
T  36691823 cttgatatatgtgaaa 36691808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 324
Target Start/End: Complemental strand, 11833603 - 11833314
Alignment:
Q  31 gatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaaacgcgaaat 129  Q
    |||| |||||||||| ||||| |||||||||||||||| ||||||| | || ||||||| | |||| |||||| ||||||| || ||||| |||||||||    
T  11833603 gatctgcaacgttgatgtccagatcattgatttaacttgtaattgacttatatcgatctcttaatatgaactaaacgaacaccgcgacaagacgcgaaat 11833504  T
Q  130 caaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaaaccacnnnn 229  Q
    ||| || | || ||||  |||||||     |||||| ||||||| |||||||| |||||||||||| |  ||||||  ||||||||||||||||||        
T  11833503 caatcgccacataagaccactaaca----cacgccgcaattagacgacgaaatcacaaaaacacaaga--aaaaacaagatatatgtgaaaaccacttat 11833410  T
Q  230 nnnagaacgagagaaaagaggaaaaaagatgtagcgg-gtgattttaggtc-aaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaag 324  Q
       | |  || ||||||||| ||||||||||||  ||  |||||||| ||| |||||||||||||||||| || |||| || ||||||| |||||||    
T  11833409 ttaa-attgaaagaaaagagaaaaaaagatgtaaaggaatgattttaagtcaaaaaatgacctaaaaccacccattctagaggaatgaatgagaaag 11833314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 31788609 - 31788390
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||| ||||| || |||||| | |||| |||||||||||||||||||||||| || || || ||||||| |||| | ||||||||||||||||||     
T  31788609 taagtcactgaaatactcatgctttcggatctgcaacgttgacgtccaaatcattgcttgaatttgtaattgattgatatagatctttcaataggaactg 31788510  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac--aaaaacacaataaga 200  Q
     || |||| || ||||| | || |||||||||| |||||||||  || ||||||| |||| || | ||||| |||||||| ||  |||||||||| | ||    
T  31788509 aacaaacaccgcgacaagatgc-aaatcaaacgccgcacaagacaacgaacaacaaaacgtcgcacttagacgacgaaattacaaaaaaacacaaaagga 31788411  T
Q  201 aaaactcgatatatgtgaaaa 221  Q
    | |||| |||| |||||||||    
T  31788410 acaacttgatagatgtgaaaa 31788390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 225
Target Start/End: Original strand, 4041549 - 4041764
Alignment:
Q  12 cgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca 111  Q
    |||||| || |||||| | |||| |||||||||||||||||||||||| || |  ||  |||||| | ||||  ||||||||||||||||   || ||||    
T  4041549 cgaaatactcatgctttcggatctgcaacgttgacgtccaaatcattggttgagtttgcaattgactaatgtaaatctttcaataggaaccgaacaaaca 4041648  T
Q  112 cg-tgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaactcga 209  Q
    |  |||||| | || |||||||||| || |||||| ||| |||||||||||| || | ||||| |||||||| || |||||||||| | |||||||| ||    
T  4041649 ccatgacaagatgcaaaatcaaacgccgtacaagacgacgaacaacacaacgacgcacttagaagacgaaatcacaaaaaacacaaaaggaaaaacttga 4041748  T
Q  210 tatatgtgaaaaccac 225  Q
    || |||||||||||||    
T  4041749 tagatgtgaaaaccac 4041764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 5427816 - 5428033
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||| ||||| |  || ||||| |||| ||||||||||||  ||| |||||| || || || || |||| |||||| |||||| ||||| ||||||    
T  5427816 taagtcactgaaatacacatacttccggatctgcaacgttgacgcacaagtcattggttgaatttgta-ttgactgatgtagatcttccaatatgaacta 5427914  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaa 202  Q
     || ||||| | ||||| ||||||||||||||| | ||||||| ||| ||||||| ||||||| | || || |||||||| |||||||||||| |  |||    
T  5427915 aacaaacaccgcgacaagacgcgaaatcaaacgccacacaagacgacgaacaacaaaacgccgcacttggacgacgaaatcacaaaaacacaaaagaaaa 5428014  T
Q  203 aactcgatatatgtgaaaa 221  Q
    |||| |||| |||||||||    
T  5428015 aacttgatagatgtgaaaa 5428033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 81 - 225
Target Start/End: Original strand, 11985254 - 11985400
Alignment:
Q  81 tgtcgatctttcaataggaactatacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacga 179  Q
    ||||| ||||||||||||||||| | |||||| | ||||| |||| |||||||||| |||||||||  || |||||||||| |||| | ||||| |||||    
T  11985254 tgtcgctctttcaataggaactaaatgaacaccgcgacaagacgcaaaatcaaacgccgcacaagacaacaaacaacacaaagccgcacttagacgacga 11985353  T
Q  180 aataacaaaa-acacaataagaaaaactcgatatatgtgaaaaccac 225  Q
    ||| |||||| |||||| |  ||||||| ||||||||||||||||||    
T  11985354 aatcacaaaacacacaaaagaaaaaacttgatatatgtgaaaaccac 11985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 30400000 - 30400169
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaa 120  Q
    |||||| | |||| |||||||||||| |||||||||||||| || || ||||||| ||| || ||||||||||||||||||| ||||||| || ||||      
T  30400000 atgctttcggatctgcaacgttgacgcccaaatcattgattgaatttgtaattgactgaagttgatctttcaataggaactaaacgaacaccgcgacacg 30400099  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
    | || |||||||| | ||||||||| ||  |||||||||| | || | ||||| |||||||||| |||||    
T  30400100 atgcaaaatcaaatgccgcacaagacgaagaacaacacaatgtcgcacttagacgacgaaataaaaaaaa 30400169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 29173667 - 29173889
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  |||||| | |||| |||||||||||  |||||| ||||||| || || ||||||| ||||||||| ||||||||||||||||    
T  29173667 taagtcaccgaaatacccatgctttcggatctgcaacgttgacacccaaataattgattgaatttgtaattga-tgatgtcgagctttcaataggaacta 29173765  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaa 201  Q
     |||||||| | || || |||| |||||| | |    | |||| ||  ||||||||||||||| | ||||| |||||||| || |||||||||| | |||    
T  29173766 aacgaacactgcgataagacgcaaaatcacatgcaatataagacgatgaacaacacaacgccgcacttagacgacgaaatcacaaaaaacacaaaaggaa 29173865  T
Q  202 aaactcgatatatgtgaaaaccac 225  Q
    ||||  || |||||||||||||||    
T  29173866 aaacctgaaatatgtgaaaaccac 29173889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 31 - 162
Target Start/End: Original strand, 42698675 - 42698807
Alignment:
Q  31 gatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaaacgcgaaat 129  Q
    |||| |||||| |||||||||||||| ||||| || || ||||| | |||||||||||||||||||| ||||| || ||||  | ||||| |||| ||||    
T  42698675 gatctgcaacgctgacgtccaaatcactgattgaatttgtaattcactgatgtcgatctttcaatagaaactaaacaaacattgcgacaagacgcaaaat 42698774  T
Q  130 caaacgtcgcacaagatgactaacaacacaacg 162  Q
    |||||| | ||||||| ||| ||||||||||||    
T  42698775 caaacgccacacaagacgacgaacaacacaacg 42698807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 145
Target Start/End: Original strand, 33585681 - 33585824
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    |||| |||||||| | || |||||||| |||| |||||||||||||||||||||||| || || || ||||||| ||| || ||| ||||||||||||||    
T  33585681 ttaaatcaccgaattactcatgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttgtaattgattgaggtagatttttcaataggaact 33585780  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaaga 145  Q
      || |||| || ||||| ||||| ||||||||| | |||||||    
T  33585781 gaacaaacaccgcgacaagacgcgtaatcaaacgccacacaaga 33585824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 225
Target Start/End: Original strand, 39310831 - 39311022
Alignment:
Q  36 gcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaaacgcgaaatcaaac 134  Q
    |||| ||||| | |||||||| ||||| || || ||||||| ||| |||||||||  ||||||||||| || || || | || ||  |||||||||||||    
T  39310831 gcaatgttgatgcccaaatcaatgattgaatttgtaattgactgaagtcgatcttcaaataggaactaaacaaataccgcgataaggcgcgaaatcaaac 39310930  T
Q  135 gtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaactcgatatatgtgaaaaccac 225  Q
    |  |||||||| ||  ||||||||||| ||  | |||||||| ||||| || |||||| ||| | |||||||| |||| |||||||||||||    
T  39310931 gctgcacaagacgaagaacaacacaacaccacacttagatgatgaaatcacaaaaaacccaaaaggaaaaacttgataaatgtgaaaaccac 39311022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 12677397 - 12677490
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaatag 97  Q
    ||||||||| ||||||  |||||||| ||||  ||||||||||| ||||||||||| || || || ||||||| | ||| ||||||||||||||    
T  12677397 taagtcaccaaaattcacatgcttccggatcttcaacgttgacgcccaaatcattggttgaatttgtaattgacttatgccgatctttcaatag 12677490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 37994164 - 37994104
Alignment:
Q  265 gggtgattttaggtcaaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    |||||||| |||||||||||||||||||||||| || | ||||| || |||||||||||||    
T  37994164 gggtgattctaggtcaaaaatgacctaaaaccacccttcctcgatgattgaaagagaaaga 37994104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 141
Target Start/End: Original strand, 28871767 - 28871873
Alignment:
Q  36 gcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaaacgcgaaatcaaac 134  Q
    ||||||| |||| | ||||||||| || ||  | ||||||| ||| || ||||||||||||||||| | ||||||| || ||||| ||||||||||||||    
T  28871767 gcaacgtcgacgcctaaatcattggttgaatctgtaattgactgaagttgatctttcaataggaaccaaacgaacaccgcgacaagacgcgaaatcaaac 28871866  T
Q  135 gtcgcac 141  Q
    | |||||    
T  28871867 gccgcac 28871873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 36175477 - 36175551
Alignment:
Q  38 aacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac 112  Q
    ||||||||||||||||||||||||| ||  | ||||||  |||||| ||||||||||||| ||| | ||||||||    
T  36175477 aacgttgacgtccaaatcattgattgaatatgtaattgtttgatgttgatctttcaatagaaaccaaacgaacac 36175551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 6436722 - 6436609
Alignment:
Q  42 ttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaaacgcgaaatcaaacgtcgca 140  Q
    ||||||||||||||||||||| ||  ||| ||||| ||| |  ||||||||| || |||| | ||||||| ||| |||| | || |||||||||||||||    
T  6436722 ttgacgtccaaatcattgattgaatatttgattgactgaagctgatctttcattatgaaccagacgaacaccgtaacaagatgcaaaatcaaacgtcgca 6436623  T
Q  141 caagatgactaaca 154  Q
    ||||| ||| ||||    
T  6436622 caagacgacgaaca 6436609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 14423446 - 14423381
Alignment:
Q  36 gcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaac 101  Q
    ||||||||||||||||||||||||||| ||  | ||||||| | | ||||||||||||||| ||||    
T  14423446 gcaacgttgacgtccaaatcattgattaaatctgtaattgactaaagtcgatctttcaataagaac 14423381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 17151558 - 17151434
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaa 120  Q
    |||||||| ||||  |||||| |||| |||||||||||||| ||  | ||||||| |||  | ||||||||||||||||  | ||||||| ||| ||||     
T  17151558 atgcttccggatctacaacgtcgacgcccaaatcattgattgaatctgtaattgactgaaattgatctttcaataggaatcaaacgaacaccgtaacaag 17151459  T
Q  121 acgcgaaatcaaacgtcgcacaaga 145  Q
    | |||||||||||||  ||||||||    
T  17151458 atgcgaaatcaaacgctgcacaaga 17151434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 323
Target Start/End: Original strand, 29574842 - 29574901
Alignment:
Q  265 gggtgattttaggtcaaaaa-tgacctaaaaccatcccttctcgacgaatgaaagagaaa 323  Q
    |||||||| ||||||||||| ||| ||||||||| |||| |||||||| |||||||||||    
T  29574842 gggtgattctaggtcaaaaaatgatctaaaaccacccctcctcgacgagtgaaagagaaa 29574901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 319
Target Start/End: Original strand, 32448830 - 32448885
Alignment:
Q  265 gggtgattttaggtcaaa-aatgacctaaaaccatcccttctcgacgaatgaaaga 319  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||| || |||||||    
T  32448830 gggtgattttaggtcaaataatgacctaaaaccacccctcctcgatgagtgaaaga 32448885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 36175652 - 36175711
Alignment:
Q  266 ggtgattttaggtcaaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    ||||||| | |||||||||||||||||||||| | ||||| || ||||||| ||||||||    
T  36175652 ggtgattatcggtcaaaaatgacctaaaaccacctcttcttgatgaatgaaggagaaaga 36175711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 10237181 - 10237271
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac 112  Q
    |||||||  |||| ||||||||||||||||||||||||||| || || | ||||  ||| |  |||||||||||| |||| | ||||||||    
T  10237181 atgcttctggatctgcaacgttgacgtccaaatcattgattgaatttgtgattgtctgaagctgatctttcaatacgaaccaaacgaacac 10237271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 325
Target Start/End: Original strand, 12648109 - 12648194
Alignment:
Q  241 agaaaagaggaaaaaagatgtagcggg-tgattttaggtcaaaa-atgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    ||||||||| ||||||||||| | ||| ||||| |||||||||| |||||||||||||| |||| ||| |||| | |||||||||||    
T  12648109 agaaaagag-aaaaaagatgtggaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcaacgagtaaaagagaaaga 12648194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 10929800 - 10929760
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatt 62  Q
    |||||||| |||| |||||||||| ||||||||||||||||    
T  10929800 atgcttccggatctgcaacgttgatgtccaaatcattgatt 10929760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 24461592 - 24461488
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    ||||| |||| || |||||||| |||| ||||||||| |||||||||||| |||| ||  | |  |||| ||| || |||||||||||| |||| | |||    
T  24461592 tcaccaaaatactaatgcttccggatctgcaacgttggcgtccaaatcatcgattgaatctgtggttgactgaagttgatctttcaatatgaaccaaacg 24461493  T
Q  108 aacac 112  Q
    |||||    
T  24461492 aacac 24461488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 29574593 - 29574633
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatt 62  Q
    |||||||| |||| ||||||||| |||||||||||||||||    
T  29574593 atgcttccggatctgcaacgttggcgtccaaatcattgatt 29574633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 30400232 - 30400307
Alignment:
Q  251 aaaaaagatgtagcggg--tgattttaggtc-aaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaa 323  Q
    |||||||||||||  ||  |||||||||||| |||||||| ||||||||| | |||||||| ||||||| ||||||    
T  30400232 aaaaaagatgtagatggagtgattttaggtcaaaaaatgatctaaaaccacctcttctcgatgaatgaaggagaaa 30400307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 6e-62; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 44 - 325
Target Start/End: Complemental strand, 27456646 - 27456362
Alignment:
Q  44 gacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaaacgcgaaatcaaacgtcgcaca 142  Q
    |||| |||||||||||||| ||||| ||||||| |||||||||||||||||||||||||| |||||||| | ||||| |||||||||||||||| |||||    
T  27456646 gacgcccaaatcattgattgaacttgtaattgactgatgtcgatctttcaataggaactaaacgaacaccgcgacaagacgcgaaatcaaacgttgcaca 27456547  T
Q  143 agatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaaaccacnnnnnnnagaacgagag 242  Q
    ||||||||||||||||||||||| ||||||| || ||||| |||||||||||| | ||| ||||  ||||||| |||||||||       |||  || ||    
T  27456546 agatgactaacaacacaacgccgcaattagacgatgaaatcacaaaaacacaaaaggaagaacttaatatatgcgaaaaccac-ttatttagattgaaag 27456448  T
Q  243 aaaagaggaaaaaagatgtagcgg-gtgattttaggt--caaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    ||||||||||||||||||||| || ||||||||||||   ||||| ||  ||||||||||||| ||||||||||||| ||||||||    
T  27456447 aaaagaggaaaaaagatgtagaggagtgattttaggtaaaaaaaaagagttaaaaccatccctcctcgacgaatgaaggagaaaga 27456362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 4 - 225
Target Start/End: Complemental strand, 31919134 - 31918912
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||| |||||| | |||||||  |||| |||||||||| |  ||||||||||||| ||||| ||||||| ||||||||||||||||| ||||||||    
T  31919134 taagtcactgaaattttcatgcttctggatctgcaacgttgatgctcaaatcattgattgaacttgtaattgactgatgtcgatctttcaacaggaacta 31919035  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaa 202  Q
     |||||||| | ||||| ||||||||||||||| ||||||| ||| ||||||||||| ||||| ||||||| |||||||| ||||||| |||| |  |||    
T  31919034 aacgaacactgcgacaagacgcgaaatcaaacgccgcacaaaatggctaacaacacatcgccgcaattagacgacgaaatcacaaaaatacaaaagaaaa 31918935  T
Q  203 aactcgatatatgtgaaaaccac 225  Q
    |||| ||||||||||||||||||    
T  31918934 aacttgatatatgtgaaaaccac 31918912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 4 - 323
Target Start/End: Complemental strand, 5983982 - 5983660
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  |||||||| |||| ||| |||||||| ||||||||||| || || || ||||||| |||||| |||||||||||||||||||    
T  5983982 taagtcaccgaaatacccatgcttccggatctgcagcgttgacgcccaaatcattggttgaatttgtaattgactgatgtagatctttcaataggaacta 5983883  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaa 202  Q
     || ||||| | ||||| || |||||||||||| ||||||||| ||| ||||||| ||||||| | ||||| |||||||| |||||||||||| |  |||    
T  5983882 aacaaacaccgcgacaagacacgaaatcaaacgccgcacaagacgacgaacaacaaaacgccgcacttagacgacgaaatcacaaaaacacaaaagcaaa 5983783  T
Q  203 aactcgatatatgtgaaaaccacnnnnnnnagaacgagag-aaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccatc 299  Q
    |||| |||| ||||||||||||        ||| ||| || ||||| ||||||||||||||| || |||||| |||||| |||||||| |||||||||||    
T  5983782 aacttgatagatgtgaaaacca-tttatttagatcgaaagaaaaaggggaaaaaagatgtagacgagtgattctaggtcaaaaaatgatctaaaaccatc 5983684  T
Q  300 ccttctcgacgaatgaaagagaaa 323  Q
    ||| ||||| ||| ||| ||||||    
T  5983683 cctcctcgatgaacgaaggagaaa 5983660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 8 - 325
Target Start/End: Original strand, 7337613 - 7337933
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    |||||||||| |  |||||||| |||| ||||||||||||| |||||||||| || || || ||||||| |||||| |||||||||||| |||||  ||     
T  7337613 tcaccgaaatacccatgcttccggatctgcaacgttgacgtgcaaatcattgcttgaatttgtaattgattgatgtagatctttcaatatgaactgaaca 7337712  T
Q  108 aaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaac 205  Q
    |||| || ||||| |||||||||||||||| |||||||| ||| ||||||||||||||| | ||||| || ||||| || |||||||||| | |||||||    
T  7337713 aacaccgcgacaagacgcgaaatcaaacgttgcacaagacgacgaacaacacaacgccgcacttagacgatgaaatcacaaaaaacacaaaaggaaaaac 7337812  T
Q  206 tcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccatccctt 303  Q
    | |||| |||||||||||||       |||  || |||||||||||||||||||||||  |||||||| ||| || ||||||||| || ||||||||||     
T  7337813 ttgatagatgtgaaaaccac-ttatttagattgaaagaaaagaggaaaaaagatgtagaggggtgattctagatcaaaaaatgacatagaaccatccctc 7337911  T
Q  304 ctcgacgaatgaaagagaaaga 325  Q
    ||||| ||| ||| ||||||||    
T  7337912 ctcgatgaacgaaggagaaaga 7337933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 23291588 - 23291812
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||||||||||  |||||||| ||||  ||||||||| | ||||||||||| || || || ||||||| ||||| ||||||||||||||||| ||    
T  23291588 taagtcaccgaaattcacatgcttccggatcttcaacgttgatgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaataggaaata 23291687  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac--aaaaacacaataaga 200  Q
     ||||||| || ||||| | |||||||||||||||||||||||| |  ||||||||||||||||| ||||| |||||||| ||  |||||||||| |  |    
T  23291688 aacgaacaccgcgacaagaagcgaaatcaaacgtcgcacaagataatgaacaacacaacgccgtacttagacgacgaaatcacaaaaaaacacaaaagaa 23291787  T
Q  201 aaaactcgatatatgtgaaaaccac 225  Q
    |||||| ||||||||||||||||||    
T  23291788 aaaacttgatatatgtgaaaaccac 23291812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 4 - 308
Target Start/End: Complemental strand, 45415704 - 45415398
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| | ||||||||| |||| |||||||||||||||||||||||| || |  || ||||||| |||||| ||||||||||||||||||     
T  45415704 taagtcaccgaaatacctatgcttccggatctgcaacgttgacgtccaaatcattgcttgagtttgtaattgattgatgtagatctttcaataggaactg 45415605  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaa 202  Q
     || |||| || ||||| |||||||||||||||  |||||||| ||| ||||||| ||||||| | ||||| |||||||| ||||||| |||  |  |||    
T  45415604 aacaaacaccgcgacaagacgcgaaatcaaacgatgcacaagacgacgaacaacaaaacgccgcacttagacgacgaaatcacaaaaaaacacaagaaaa 45415505  T
Q  203 aactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccatcc 300  Q
    |||| |||| |||||||||||||       | |  || ||||||| |||||||||||||||  |||||||| ||| || |||||||||||||||||| ||    
T  45415504 aacttgatagatgtgaaaaccacttatttaa-attgaaagaaaaggggaaaaaagatgtagaggggtgattctagatcaaaaaatgacctaaaaccaccc 45415406  T
Q  301 cttctcga 308  Q
    || |||||    
T  45415405 ctcctcga 45415398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 225
Target Start/End: Complemental strand, 1742424 - 1742203
Alignment:
Q  7 gtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatac 106  Q
    |||||||||||||  |||||| | ||||  ||||||||||| ||||||||||| || || || ||||||| ||||| ||||||||||||||||| || ||    
T  1742424 gtcaccgaaattcacatgctttcggatcttcaacgttgacgcccaaatcattggttgaatttgtaattgattgatgccgatctttcaataggaaataaac 1742325  T
Q  107 gaacacgt-gacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac--aaaaacacaataagaaaa 203  Q
    ||||||   ||||| ||||||||||||||||||||||||| ||| ||||||||||||||| | ||||| |||||||| ||  ||||| |||| |  ||||    
T  1742324 gaacaccacgacaagacgcgaaatcaaacgtcgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaaatacaaaagaaaaa 1742225  T
Q  204 actcgatatatgtgaaaaccac 225  Q
    ||| ||||||||||||||||||    
T  1742224 acttgatatatgtgaaaaccac 1742203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 7836742 - 7836928
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||||||||||  |||| |||||||   ||||||||||| ||||||||||| || || || ||||||| ||||||||||||||| ||||||| ||    
T  7836742 taagtcaccgaaattcacatgcctccagatattcaacgttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcgataggaaata 7836841  T
Q  104 tacgaac-acgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaa 189  Q
     ||||||  || ||||| ||||||||||||||||||||||||| ||| ||||||||||||||| | ||||| || ||||| ||||||    
T  7836842 aacgaacgccgcgacaagacgcgaaatcaaacgtcgcacaagacgacgaacaacacaacgccgcacttagacgatgaaatcacaaaa 7836928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 3 - 330
Target Start/End: Complemental strand, 32395145 - 32394816
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| |  |||||| |  ||| |||||||||||||||||||||||| || || || |||||||||||||| ||||||||||||||||||    
T  32395145 ttaagtcaccgaaatacccatgctttcgaatctgcaacgttgacgtccaaatcattggttgaatttgtaattgaatgatgtagatctttcaataggaact 32395046  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
      || |||| || || |||||| |||||||||||| |||||||| ||  | ||||||||||||| | ||  | |||||||| || |||||||||| | ||    
T  32395045 gaacaaacaccgcgataaaacgggaaatcaaacgttgcacaagacgatgagcaacacaacgccgcacttgaacgacgaaatcacaaaaaacacaaaagga 32394946  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtagcggg-tgattttaggtc-aaaaatgacctaaaaccat 298  Q
    |||||| |||| |||||||||||||       |||  || ||||||| || ||||||||| || ||| ||||| || ||| ||||||||||||||||||     
T  32394945 aaaacttgatagatgtgaaaaccac-tcatttagattgaaagaaaag-gggaaaaagatgcagagggatgattctaagtcaaaaaatgacctaaaaccac 32394848  T
Q  299 cccttctcgacgaatgaaagagaaagagaggt 330  Q
    |||| ||||| ||| ||| |||||||| ||||    
T  32394847 ccctcctcgatgaacgaaggagaaagaaaggt 32394816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 225
Target Start/End: Original strand, 21947563 - 21947787
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    |||||||||||||||  | |||||||| |||| |||||||||||||||||||||||| || || || ||||||| |||||| |||||||||||| |||||    
T  21947563 ttaagtcaccgaaatattcatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgactgatgtagatctttcaataagaact 21947662  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
    | || |||| || ||||| ||||||||||||||| ||  | ||| ||| ||||||||| ||| | | ||||| |||||||| || |||||||||| |  |    
T  21947663 aaacaaacaccgcgacaagacgcgaaatcaaacgccgtccgagacgacgaacaacacagcgctgcacttagacgacgaaatcacaaaaaacacaaaagaa 21947762  T
Q  201 aaaactcgatatatgtgaaaaccac 225  Q
    |||||| |||| |||||||||||||    
T  21947763 aaaacttgatagatgtgaaaaccac 21947787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 44915779 - 44915599
Alignment:
Q  10 accgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaa 109  Q
    |||||||| || |||||||| |||| ||||| |||||| |||||||||||||| || || ||||||| |||||| |||||||||||| |||||| |||||    
T  44915779 accgaaatactcatgcttccggatctgcaacattgacgcccaaatcattgattgaatttgtaattgactgatgttgatctttcaatatgaactaaacgaa 44915680  T
Q  110 ca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaa 189  Q
    || || |||||||||| |||||||| | ||||||| |||||||||| |||||||||  ||||||| || ||||| ||||||    
T  44915679 caccgcgacaaaacgcaaaatcaaatgccgcacaatatgactaacatcacaacgccacaattagacgatgaaatcacaaaa 44915599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 22 - 325
Target Start/End: Original strand, 34878242 - 34878541
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaa 120  Q
    |||||||| ||||  ||||||||||| ||||||||||| || || || ||||||| ||||| ||||||||||||||||| |  || ||||| | ||||||    
T  34878242 atgcttccggatcttcaacgttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaataggaaattaacaaacaccgcgacaaa 34878341  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaa 220  Q
    ||||||||||||||  ||||||||| ||| ||||||||||||||||| ||| | |||||| | ||||||| |||     ||||||| ||||| |||||||    
T  34878342 acgcgaaatcaaacaccgcacaagacgacgaacaacacaacgccgtacttaaacgacgaagtcacaaaaaaaca-----aaaaacttgatatgtgtgaaa 34878436  T
Q  221 accacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccatcccttctcgacgaatgaaag 318  Q
    |||||       | |  || ||||||  |||||||||||||||  | |||||| |||||| |||||||||||||||||| |||| ||||| ||| |||||    
T  34878437 accacttatttaa-attgaaagaaaa-tggaaaaaagatgtagatgagtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaag 34878534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 4 - 325
Target Start/End: Original strand, 10776407 - 10776730
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| || |||||||  |||| |||| ||||||||||||||||||||||  | || ||||||| ||||||||||||||||| ||||| ||    
T  10776407 taagtcaccgaaatactcatgcttctggatctgcaatgttgacgtccaaatcattgattggatttgtaattgactgatgtcgatctttcaaaaggaagta 10776506  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa-cacaataagaa 201  Q
     ||||||| || ||||| ||||  ||||||||| |||| |||| ||| ||||||||||||||| | ||||| ||| |||| ||||||| ||||| | |||    
T  10776507 aacgaacaccgcgacaagacgcacaatcaaacgccgcataagacgacgaacaacacaacgccgcacttagacgactaaatcacaaaaagcacaaaaggaa 10776606  T
Q  202 aaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagagg--aaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaacca 297  Q
    | |||   ||||||| ||||||||       |||  || |||||| |||  |||||||||||||  |||||||| |||||| |||||||| |||||||||    
T  10776607 acact---tatatgtaaaaaccac-ttatttagattgaaagaaaataggaaaaaaaagatgtagatgggtgattctaggtcaaaaaatgatctaaaacca 10776702  T
Q  298 tcccttctcgacgaatgaaagagaaaga 325  Q
     || | ||||| ||||||| ||||||||    
T  10776703 cccttcctcgatgaatgaaggagaaaga 10776730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 225
Target Start/End: Complemental strand, 14872785 - 14872563
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||| |||| |  |||||||| |||| |||||||||||| ||||||||||| || || || ||||||| ||||||||||||||||||| ||||||    
T  14872785 taagtcaccaaaatacccatgcttccggatctgcaacgttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcaata-gaacta 14872687  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaa 201  Q
     | ||||| || ||||| ||||||||||||||| ||||||||| ||| |||||||||| |||| | || || ||| |||| || ||||||||||   |||    
T  14872686 aatgaacaccgcgacaagacgcgaaatcaaacgccgcacaagacgacgaacaacacaatgccgcacttggacgacaaaatcacaaaaaacacaaatggaa 14872587  T
Q  202 aaactcgatatatgtgaaaaccac 225  Q
    ||||| ||||| ||| ||||||||    
T  14872586 aaacttgatatttgtaaaaaccac 14872563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 190
Target Start/End: Complemental strand, 21687019 - 21686832
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||||||  ||  |||||||| ||||  ||| ||||||| ||||||||||| || || |||||||||| ||||| | ||||||||||||||| |     
T  21687019 taagtcaccgaatatcacatgcttccggatcttcaatgttgacgcccaaatcattggttgaatttttaattgagtgatgcctatctttcaataggaaatt 21686920  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
     || ||||| | |||||||||| |||||||||| ||||||||| ||| ||||||||||||||||| ||||| |||||||| |||||||    
T  21686919 aacaaacaccgcgacaaaacgcaaaatcaaacgccgcacaagacgacgaacaacacaacgccgtacttagacgacgaaatcacaaaaa 21686832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 225
Target Start/End: Original strand, 35484341 - 35484560
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    |||||||||| |  |||||| | |||| |||||||||||||||||||||||| || || || ||||||| |||||| |||||||||||||||| |  ||     
T  35484341 tcaccgaaatacccatgctttcggatctgcaacgttgacgtccaaatcattgcttgaatttgtaattgattgatgtagatctttcaataggaattgaaca 35484440  T
Q  108 aaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaac 205  Q
    |||| || ||||| |||||||| |||| | ||||||||| ||| ||||||||||||||| | ||||| |||||||  || |||||||||||   ||||||    
T  35484441 aacaccgcgacaagacgcgaaagcaaatgacgcacaagacgacgaacaacacaacgccgcacttagacgacgaaaccacaaaaaacacaattgaaaaaac 35484540  T
Q  206 tcgatatatgtgaaaaccac 225  Q
    | |||| |||||||||||||    
T  35484541 ttgatagatgtgaaaaccac 35484560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 27580074 - 27580296
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| || |||||| |  ||| |||| ||||||| |||||||||| ||| || || ||||| | ||| ||||||||||||||||||||||    
T  27580074 taagtcaccgaaatactcatgctttcgaatctgcaatgttgacgcccaaatcatttattgaatttgtaatttactgaagtcgatctttcaataggaacta 27580173  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaa 202  Q
     | ||||| || ||||| |||| |||||||| | | ||| | | ||| ||||||||||||||| | ||| | |||||||| ||||||| |||| | ||||    
T  27580174 aatgaacaccgcgacaagacgcaaaatcaaatgccacacgatacgacgaacaacacaacgccgcatttaaacgacgaaatcacaaaaatacaaaaggaaa 27580273  T
Q  203 aactcgatatatgtgaaaaccac 225  Q
    |||| ||||||||||||||||||    
T  27580274 aacttgatatatgtgaaaaccac 27580296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 51916619 - 51916793
Alignment:
Q  12 cgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca 111  Q
    |||||| || ||||||||  ||| ||||||||||||  ||||||||||||| || || ||||||| ||| ||   ||||||||||||||||| ||||||     
T  51916619 cgaaatactcatgcttccgtatctgcaacgttgacgctcaaatcattgattgaatttgtaattgactgacgtt--tctttcaataggaactaaacgaac- 51916715  T
Q  112 cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaa 189  Q
    || ||||| ||||||||||||| | ||||||||| ||||||||||| ||| ||||||||||| || ||||| ||||||    
T  51916716 cgcgacaagacgcgaaatcaaatgccgcacaagacgactaacaacataacaccgtaattagacgatgaaatcacaaaa 51916793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 225
Target Start/End: Original strand, 8211875 - 8212079
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaa 120  Q
    |||||||| |||| ||||| |||||| ||| ||||||| || || || || |||| |||||| ||||||||||||| ||||| | ||||| || |||||     
T  8211875 atgcttccggatctgcaacattgacg-ccagatcattggttgaatttgtatttgactgatgtagatctttcaatagtaactaaatgaacatcgcgacaag 8211973  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaactcgatatatgtgaa 219  Q
    ||| | ||||||||| ||||||||| ||  ||||||||||||||| | ||||| |||||||| || |||||||||| | | |||||| ||||||||||||    
T  8211974 acgtggaatcaaacgccgcacaagacgatgaacaacacaacgccgcatttagacgacgaaatcacaaaaaacacaaaagggaaaacttgatatatgtgaa 8212073  T
Q  220 aaccac 225  Q
    ||||||    
T  8212074 aaccac 8212079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 13144758 - 13144981
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||| ||||| || |||||| |||||| ||||  ||||||||||||||||||||| || || ||||||| | | |||| |||||||||| |||  |    
T  13144758 taagtcactgaaatactcatgctttcagatctgcaaaattgacgtccaaatcattgattgaatttgtaattgattaaagtcggtctttcaatatgaatca 13144857  T
Q  104 tacgaacacgt-gacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaat-aacaaaaacacaataagaa 201  Q
     | ||||||   ||||| ||||||||||||| || ||||||||  ||  |||||||||||||| | ||||| |||||||| || |||||||||| | |||    
T  13144858 aatgaacactacgacaagacgcgaaatcaaatgttgcacaagacaacagacaacacaacgccgcatttagacgacgaaatcaaaaaaaacacaaaaggaa 13144957  T
Q  202 aaactcgatatatgtgaaaaccac 225  Q
    ||| | ||||||| ||||||||||    
T  13144958 aaagttgatatatatgaaaaccac 13144981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 72 - 225
Target Start/End: Original strand, 11462462 - 11462616
Alignment:
Q  72 attgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaatt 170  Q
    ||||| |||||| |||||| |||||||||||| || ||||| | ||||| ||| ||||||||||| ||||||||| ||| ||||||| || |||| | ||    
T  11462462 attgactgatgtagatcttccaataggaactaaacaaacaccgcgacaagacgtgaaatcaaacgccgcacaagacgacgaacaacaaaatgccggactt 11462561  T
Q  171 agatgacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaaaccac 225  Q
    |||||||||||| |||||||||||| |  ||||||| |||| |||||||| ||||    
T  11462562 agatgacgaaatcacaaaaacacaaaagaaaaaacttgatagatgtgaaacccac 11462616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 89 - 225
Target Start/End: Complemental strand, 940424 - 940287
Alignment:
Q  89 tttcaataggaactatacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-a 186  Q
    |||||||||||| || |||||||| | ||||| ||||||||||||||||||||||||| ||| ||||||||||| ||| | ||||| |||| ||| || |    
T  940424 tttcaataggaattaaacgaacaccgcgacaagacgcgaaatcaaacgtcgcacaagacgacaaacaacacaacaccgcacttagacgacggaatcacaa 940325  T
Q  187 aaaacacaataagaaaaactcgatatatgtgaaaaccac 225  Q
    |||||||||  | ||||||| ||||||||||||||||||    
T  940324 aaaacacaagga-aaaaacttgatatatgtgaaaaccac 940287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 31 - 159
Target Start/End: Complemental strand, 3228388 - 3228259
Alignment:
Q  31 gatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaaacgcgaaat 129  Q
    |||| |||||||||||| ||||||||||||||  | || ||||||| |||| ||||||||||||||||||||| || |||| || ||||| | |||||||    
T  3228388 gatctgcaacgttgacgcccaaatcattgattgtatttgtaattgactgatatcgatctttcaataggaactaaacaaacaccgcgacaagatgcgaaat 3228289  T
Q  130 caaacgtcgcacaagatgactaacaacaca 159  Q
    |||| | ||||||||| ||| |||||||||    
T  3228288 caaatgccgcacaagacgacgaacaacaca 3228259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 190
Target Start/End: Complemental strand, 50377408 - 50377287
Alignment:
Q  70 taattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaa 168  Q
    ||||||| ||||||||||||||||||||| |||| ||| |||| | ||||| ||||||||||||| | | || || | ||| |||||||||||||||||     
T  50377408 taattgactgatgtcgatctttcaatagggactaaacgtacaccgcgacaagacgcgaaatcaaatgccacaaaaaacgacgaacaacacaacgccgtac 50377309  T
Q  169 ttagatgacgaaataacaaaaa 190  Q
    ||||| |||||||| |||||||    
T  50377308 ttagacgacgaaatcacaaaaa 50377287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 72 - 297
Target Start/End: Complemental strand, 31984251 - 31984030
Alignment:
Q  72 attgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaatt 170  Q
    ||||| |||||||||| ||||||||||||||| | |||||| | ||||| || |||||||||||| | |||     | | ||||||||||||||| | ||    
T  31984251 attgactgatgtcgatatttcaataggaactaaatgaacaccgcgacaagacacgaaatcaaacgccacac-----ggcaaacaacacaacgccgcactt 31984157  T
Q  171 agatgacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtagcg-ggtg 269  Q
    ||| |||||||| ||||||| |||  | |||||||| ||||||||||||||||||       ||| ||| ||||||| | ||||||||||||| | ||||    
T  31984156 agacgacgaaatcacaaaaa-acacaaggaaaaacttgatatatgtgaaaaccac-ttatttagatcgaaagaaaagggaaaaaaagatgtagagaggtg 31984059  T
Q  270 attttaggtc-aaaaatgacctaaaacca 297  Q
     || |||||| ||||||||||||||||||    
T  31984058 cttctaggtcaaaaaatgacctaaaacca 31984030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 26535495 - 26535403
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaata 96  Q
    |||||||||| ||| || |||||||| |||| |||||||||| | ||||||||||||||||| || ||||| | |||| ||||||||||||||    
T  26535495 taagtcaccggaatactcatgcttccggatctgcaacgttgaagcccaaatcattgatttaaattgtaatttattgatttcgatctttcaata 26535403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 225
Target Start/End: Original strand, 35461994 - 35462206
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| |  |||||||| |||| ||||||||||||||| |||||||| ||||| || ||||||| |||| | ||||| |||| ||||| |    
T  35461994 ttaagtcaccgaaatacacatgcttccggatctgcaacgttgacgtccgaatcattggtttaatttgtaattgactgatatagatctctcaagaggaaat 35462093  T
Q  103 atacgaacacgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaa 201  Q
      || |||||         ||||| |  |||||  |||||||| ||| ||||||||||||||| | ||| | |||||||| || |||||||||| | |||    
T  35462094 gaacaaacac---------cgcgaca--aaacgctgcacaagacgacgaacaacacaacgccgcacttacacgacgaaatcacaaaaaacacaaaaggaa 35462182  T
Q  202 aaactcgatatatgtgaaaaccac 225  Q
    ||||| |||| |||||||||||||    
T  35462183 aaacttgatagatgtgaaaaccac 35462206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 15434895 - 15435038
Alignment:
Q  78 tgatgtcgatctttcaataggaactatacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatga 176  Q
    ||||||||||||||||| ||||| || | ||||| |  ||||| |||| |||||||||| |||||||||  || ||||||| ||||||| | ||||| ||    
T  15434895 tgatgtcgatctttcaagaggaattaaatgaacatcacgacaagacgcaaaatcaaacgccgcacaagacaacgaacaacagaacgccgcacttagacga 15434994  T
Q  177 cgaaataacaaaaacacaataagaaaaactcgatatatgtgaaaa 221  Q
    |||||| || |||| |||| | |||||||| ||| ||||||||||    
T  15434995 cgaaatcactaaaa-acaaaaggaaaaacttgatttatgtgaaaa 15435038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 18939465 - 18939373
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaata 96  Q
    ||||||||| |||| |  ||||||||||||| ||||||| ||||||||||||||||||| ||  | ||||||| ||| || ||||||||||||    
T  18939465 taagtcaccaaaatacacatgcttccagatctgcaacgtcgacgtccaaatcattgattaaatctgtaattgactgaagttgatctttcaata 18939373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 49504545 - 49504633
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaata 96  Q
    |||||||||  || |||||||| |||| ||||||||||| |||||||||||| || |  || ||||||| |||||| ||||||||||||    
T  49504545 tcaccgaaacactcatgcttccggatctgcaacgttgacatccaaatcattgtttgagtttgtaattgattgatgtagatctttcaata 49504633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 322
Target Start/End: Complemental strand, 49626815 - 49626735
Alignment:
Q  244 aaagaggaaaaaagatgtagcggg-tgattttaggtcaaa-aatgacctaaaaccatcccttctcgacgaatgaaagagaa 322  Q
    |||| |||||||||||| || ||| ||||||||||||||| ||||||||||||||| |||| ||||| || ||||||||||    
T  49626815 aaaggggaaaaaagatgcagaggggtgattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaa 49626735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 225
Target Start/End: Complemental strand, 39888217 - 39888115
Alignment:
Q  124 cgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataaca-aaaacacaataagaaaaactcgatatatgtgaaaac 222  Q
    ||||||||||||  ||| |||| ||  |||| |||||||||| | ||||| |||||||||||| |||||| || |  ||||||| |||||||||||||||    
T  39888217 cgaaatcaaacgctgcagaagacgaagaacaccacaacgccgcacttagacgacgaaataacaaaaaacataaaagaaaaaactagatatatgtgaaaac 39888118  T
Q  223 cac 225  Q
    |||    
T  39888117 cac 39888115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 21686772 - 21686695
Alignment:
Q  249 ggaaaaaagatgtagcgggtgattttaggtcaaaaa-tgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    ||||||||||||||| | |||||| ||| ||||||| |||||||||| |||| || ||||| ||| ||||||||||||    
T  21686772 ggaaaaaagatgtagagagtgattctagatcaaaaaatgacctaaaatcatctctcctcgatgaacgaaagagaaaga 21686695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 27580322 - 27580385
Alignment:
Q  251 aaaaaagatgtagcggg-tgattttaggtcaaaaatgacctaaaaccatcccttctcgacgaat 313  Q
    ||||||||||||| ||| ||||| ||||||||||||||||  |||||||| |||| ||||||||    
T  27580322 aaaaaagatgtagagggatgattctaggtcaaaaatgacccgaaaccatctcttcccgacgaat 27580385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 39888295 - 39888236
Alignment:
Q  37 caacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaata 96  Q
    |||||| |||| |||||||||||||| || || ||||||| ||| |||||||||||||||    
T  39888295 caacgtggacgcccaaatcattgattgaagttgtaattgactgaagtcgatctttcaata 39888236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 41994552 - 41994465
Alignment:
Q  25 cttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac 112  Q
    ||||| ||| |||||||||||||||||||||||||||| ||  ||| ||||| |||    |||||||||||| |||| | ||||||||    
T  41994552 cttccggattagcaacgttgacgtccaaatcattgattaaatatttgattgactgaaactgatctttcaatatgaacgaaacgaacac 41994465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 24597288 - 24597342
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattga 76  Q
    |||||||| ||||  |||||||||||||||||||||||||| || || |||||||    
T  24597288 atgcttccggatctacaacgttgacgtccaaatcattgattgaatttataattga 24597342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 31984307 - 31984249
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatt 62  Q
    |||||||||||||| |  |||||||| |||  |||||||||||| ||||||||||||||    
T  31984307 taagtcaccgaaatacccatgcttccggatttgcaacgttgacgcccaaatcattgatt 31984249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 15431630 - 15431683
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattg 75  Q
    ||||| ||||||| |||||||||||| |||||||||||||| || || ||||||    
T  15431630 atgctgccagatctgcaacgttgacgcccaaatcattgattgaatttgtaattg 15431683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 15836220 - 15836115
Alignment:
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaactcgatatatgtgaa 219  Q
    |||||||||||||||  |||||||| ||| |||||||||| | |  | ||||| ||| |||| || |||||||||| | |||| ||| ||| ||||||||    
T  15836220 acgcgaaatcaaacgctgcacaagacgacgaacaacacaatgtcacacttagacgacaaaatcacgaaaaacacaaaacgaaacacttgatgtatgtgaa 15836121  T
Q  220 aaccac 225  Q
    ||||||    
T  15836120 aaccac 15836115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 32679324 - 32679369
Alignment:
Q  280 aaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    ||||||||| |||||||| |||| |||||||| |||||||||||||    
T  32679324 aaaaatgacataaaaccacccctcctcgacgagtgaaagagaaaga 32679369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 34479519 - 34479414
Alignment:
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaactcgatatatgtgaa 219  Q
    ||||||||||||||| | || |||| ||| ||||| |||||||| || | ||| || ||||| || |||||||||| |  ||||||| ||||| ||||||    
T  34479519 acgcgaaatcaaacgccacataagacgacgaacaatacaacgccatactcagacgaggaaatcacaaaaaacacaaaataaaaaacttgatatgtgtgaa 34479420  T
Q  220 aaccac 225  Q
    ||||||    
T  34479419 aaccac 34479414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 49627027 - 49626962
Alignment:
Q  36 gcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaac 101  Q
    ||||||||||||||||||||||||||| || || | ||||| ||| |  |||||||||||| ||||    
T  49627027 gcaacgttgacgtccaaatcattgattgaatttgtgattgactgaagctgatctttcaatatgaac 49626962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 25564126 - 25564086
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatt 62  Q
    ||||||||||||| |||| ||||||| ||||||||||||||    
T  25564126 atgcttccagatctgcaatgttgacgcccaaatcattgatt 25564086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 1e-60; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 22 - 325
Target Start/End: Original strand, 35864896 - 35865203
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaa 120  Q
    ||||||||||||| |||| ||| |||||||||||||||||| || || ||||||| |||||||||||||||||||||||||| ||||||| || || ||     
T  35864896 atgcttccagatctgcaatgttaacgtccaaatcattgattgaatttgtaattgattgatgtcgatctttcaataggaactaaacgaacaccgcgaaaag 35864995  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataaca----aaaacacaataagaaaaactcgatatatgt 216  Q
    |||| |||||||||| | ||||||| ||||||||||||||||||| ||||||| |||||||| |||    ||||||||| |||||||||| |||||||||    
T  35864996 acgcaaaatcaaacgccacacaagacgactaacaacacaacgccgcaattagacgacgaaatcacaaattaaaacacaa-aagaaaaacttgatatatgt 35865094  T
Q  217 gaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtcaaaaatgacctaaaaccatcccttctcgacgaatga 315  Q
    |||||| ||       |||  || |||||||||||||||||||||||  || ||||||||| |||||||||||||||||||| |||| ||||| ||| ||    
T  35865095 gaaaactac-ttatttagattgaaagaaaagaggaaaaaagatgtagaaggatgattttagatcaaaaatgacctaaaaccacccctcctcgaggaacga 35865193  T
Q  316 aagagaaaga 325  Q
    | ||||||||    
T  35865194 aggagaaaga 35865203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 325
Target Start/End: Complemental strand, 9998610 - 9998285
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| |  |||||||  |||| |||||||   ||| |||||||||| || || || ||||||| |||||| |||||||||| |||||||    
T  9998610 ttaagtcaccgaaatacccatgcttctggatctgcaacgtcatcgtgcaaatcattggttgaatttgtaattgactgatgtagatctttcaagaggaact 9998511  T
Q  103 atacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaa 201  Q
    | || ||||| | ||||||||||||||||||||| ||||||||| ||| ||||||||||||||| | ||||| |||||||| |||||||||||| | |||    
T  9998510 aaacaaacaccgcgacaaaacgcgaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaacacaaaatgaa 9998411  T
Q  202 aaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc--aaaaatgacctaaaaccat 298  Q
    ||||| |||| | |||||||||||       |||  || ||||||| |||||||||||||||  |||||||| ||||||  ||||||||||||||||||     
T  9998410 aaacttgatagacgtgaaaaccac-ttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaaatgacctaaaaccac 9998312  T
Q  299 cccttctcgacgaatgaaagagaaaga 325  Q
    |||| ||||| ||| ||| ||||||||    
T  9998311 ccctcctcgatgaacgaaggagaaaga 9998285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 325
Target Start/End: Complemental strand, 10229619 - 10229293
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    |||||||||||||||  | ||||||   |||| ||||||||  |||||||||||||| || || || ||||||| |||||| |||||||||| |||||||    
T  10229619 ttaagtcaccgaaataatcatgcttttggatctgcaacgttatcgtccaaatcattggttgaatttgtaattgactgatgtagatctttcaagaggaact 10229520  T
Q  103 atacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaa 201  Q
      || ||||| | ||||||||||||||||||||| ||||||||||||| ||||||||||||||| | ||||| |||||||| |||||||||||| | |||    
T  10229519 gaacaaacaccgcgacaaaacgcgaaatcaaacgccgcacaagatgacgaacaacacaacgccgcacttagaagacgaaatcacaaaaacacaaaaggaa 10229420  T
Q  202 aaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtagcg-ggtgattttaggtc---aaaaatgacctaaaacca 297  Q
    ||||| |||| | |||||||||||       |||  || ||||||| ||||||||||||||| | ||||||| ||||||   ||||| ||||||||||||    
T  10229419 aaacttgatagacgtgaaaaccac-ttatttagattgaaagaaaaggggaaaaaagatgtagagtggtgattctaggtccaaaaaaaagacctaaaacca 10229321  T
Q  298 tcccttctcgacgaatgaaagagaaaga 325  Q
     |||| ||||| ||| ||| ||||||||    
T  10229320 cccctcctcgatgaaagaaggagaaaga 10229293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 325
Target Start/End: Complemental strand, 10233213 - 10232889
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| || ||| |||  |||| ||||||||  |||| ||||||||| || || || ||||||| |||||| |||||||||| |||||||    
T  10233213 ttaagtcaccgaaatactcatgtttctggatctgcaacgttatcgtctaaatcattggttgaatttgtaattgactgatgtagatctttcaagaggaact 10233114  T
Q  103 atacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaa 201  Q
      || ||||| | ||||||||||||||||||||| ||||||||| ||| ||||||||||||||| | ||||| |||||||| |||||||||||| | |||    
T  10233113 gaacaaacaccgcgacaaaacgcgaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaacacaaaaggaa 10233014  T
Q  202 aaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccatc 299  Q
    ||||| |||| | |||||||||||       |||  || ||||||| |||||||||||||||  |||||||| |||||| |||||||||||||||||| |    
T  10233013 aaacttgatagacgtgaaaaccac-ttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacc 10232915  T
Q  300 ccttctcgacgaatgaaagagaaaga 325  Q
    ||| || || ||| ||| ||||||||    
T  10232914 cctccttgatgaacgaaggagaaaga 10232889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 6954642 - 6954935
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  |||||||| |||| ||| | |||||||||||||||||| || || || ||||||| |||||| ||||||||||||||||||     
T  6954642 taagtcaccgaaatacccatgcttccggatctgcagcattgacgtccaaatcattggttgaatttgtaattgactgatgtagatctttcaataggaactg 6954741  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaa 201  Q
     || |||| |||||||||||||||||||||||| ||||||||| ||| ||||| ||||||||| | ||||| |||||||| || |||||||||| | |||    
T  6954742 aacaaacaccgtgacaaaacgcgaaatcaaacgccgcacaagacgacgaacaatacaacgccgcacttagacgacgaaatcacaaaaaacacaaaatgaa 6954841  T
Q  202 aaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaa 294  Q
    ||||| |||| |||||||| ||||       |||  || ||||||| |||||||||||||||  |||||||| |||||| |||||||||||||||    
T  6954842 aaacttgatagatgtgaaacccac-ttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaa 6954935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 20987745 - 20987964
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||| || |||||||||||||||||||||| | |||||||||  ||||||||||||| |||||| |||||||  |||||||||||||||||||||||||    
T  20987745 taagttactgaaattcttatgcttccagatctgtaacgttgactcccaaatcattgatgtaacttgtaattgaccgatgtcgatctttcaataggaacta 20987844  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaa 201  Q
     || |||| || ||||| ||||||||||||| | | ||||||| |||||| |||||||| ||| ||||||| |||||||| || |||||||||| |  ||    
T  20987845 aacaaacatcgcgacaagacgcgaaatcaaatgccacacaagacgactaagaacacaacaccgcaattagacgacgaaatcacaaaaaacacaaaagaaa 20987944  T
Q  202 aaactcgatatatgtgaaaa 221  Q
    ||||||||||||| ||||||    
T  20987945 aaactcgatatatttgaaaa 20987964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 3 - 325
Target Start/End: Complemental strand, 10108379 - 10108057
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||| ||||||| || |||| ||  |||| ||||||||  ||| |||||||||| || || || ||||||| |||||| |||||||||| |||||||    
T  10108379 ttaagtcgccgaaatactcatgcatctggatctgcaacgttatcgttcaaatcattggttgaatttgtaattgactgatgtagatctttcaagaggaact 10108280  T
Q  103 atacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaa 201  Q
       | ||||| | ||||||||||||||||||||| ||||||||| ||| ||||||||||||||| | ||||| |||||||| |||||||||||| | |||    
T  10108279 gagcaaacaccgcgacaaaacgcgaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaacacaaaaggaa 10108180  T
Q  202 aaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtcaaaaatgacctaaaaccatcc 300  Q
    ||||| |||| | |||||||||||       |||  || ||||||| |||||||||||||||  |||||||| |||||| ||||||||||||||||| ||    
T  10108179 aaacttgatagacgtgaaaaccac-ttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtc-aaaatgacctaaaaccaccc 10108082  T
Q  301 cttctcgacgaatgaaagagaaaga 325  Q
    || ||||| |||  || ||||||||    
T  10108081 ctcctcgatgaacaaaggagaaaga 10108057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 11 - 297
Target Start/End: Original strand, 36461384 - 36461673
Alignment:
Q  11 ccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaac 110  Q
    ||||||| || ||||||||||||| | |||||||||||||||||||||| || || || ||||||| |||||| |||||||||||||||||   || |||    
T  36461384 ccgaaatactcatgcttccagatctgtaacgttgacgtccaaatcattgcttgaatttgtaattgattgatgtagatctttcaataggaacagaacaaac 36461483  T
Q  111 a-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaactcg 208  Q
    | || ||||| ||||||||||||||| ||||||||| ||| ||||||||||||||| | ||||| |||||||| || |||||||||| |  ||||||| |    
T  36461484 accgcgacaagacgcgaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaacacaaaagaaaaaacttg 36461583  T
Q  209 atatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaacca 297  Q
    ||| ||||||||| |||       |||  || ||||||| |||||||||||||||  |||||| | |||||| ||||||||||||||||||    
T  36461584 atagatgtgaaaatcac-ttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgaatataggtcaaaaaatgacctaaaacca 36461673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 8 - 225
Target Start/End: Original strand, 12149734 - 12149953
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    |||||||||| |  || |||||||||| |||||||||||| ||||||||||| || || || |||  || |||||||||||||||||||||||||| |||    
T  12149734 tcaccgaaatacccattcttccagatctgcaacgttgacgcccaaatcattggttgaatttgtaagagactgatgtcgatctttcaataggaactaaacg 12149833  T
Q  108 aaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa-cacaataagaaaaac 205  Q
    |||| || ||||| |||||||||||||||  |||||||| ||  ||||| ||||||||| | |||||||||||||| ||||||| ||||| |  ||||||    
T  12149834 aacatcgcgacaagacgcgaaatcaaacgctgcacaagacgatgaacaatacaacgccgcacttagatgacgaaatcacaaaaatcacaaaagcaaaaac 12149933  T
Q  206 tcgatatatgtgaaaaccac 225  Q
    | ||||||||| ||||||||    
T  12149934 tggatatatgtaaaaaccac 12149953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 23799883 - 23800151
Alignment:
Q  31 gatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaaacgcgaaat 129  Q
    |||| |||||||||||| | |||||||||||| || || ||||||| || ||||| |||||||| ||||||||  ||||||| | ||||| |||||||||    
T  23799883 gatctgcaacgttgacgccgaaatcattgattgaatttgtaattgactggtgtcgttctttcaacaggaactaagcgaacactgcgacaagacgcgaaat 23799982  T
Q  130 caaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaaaccacnnnn 229  Q
    |||||| ||||||||| |||||| |||||||||||| ||||||| |||||||| ||||||||| || | |  ||||| ||||||||| ||||||||        
T  23799983 caaacgccgcacaagacgactaagaacacaacgccgcaattagacgacgaaatcacaaaaacaaaaaagggcaaacttgatatatgtaaaaaccac-tta 23800081  T
Q  230 nnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaacca 297  Q
       |||  || |||||||||||||||||||||||  | || |||||||||| |||||| |||||||||||    
T  23800082 tttagattgaaagaaaagaggaaaaaagatgtagaagagtaattttaggtcaaaaaataacctaaaacca 23800151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 325
Target Start/End: Original strand, 48650679 - 48651005
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| || || ||| |||||| ||||||||||||||||||| |||| || || || ||||||| |||||  ||||||||||||||||||    
T  48650679 ttaagtcaccgaaatactcattctttcagatctgcaacgttgacgtccaaattattggttgaatttgtaattgattgatgcagatctttcaataggaact 48650778  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
      || |||| || ||||| ||||||||||||| | |||||||||  || |||||||||| |||| | ||||| ||| |||| || |||||||||| | ||    
T  48650779 gaacaaacaccgcgacaagacgcgaaatcaaatgccgcacaagacaacgaacaacacaatgccgcacttagacgacaaaatcacaaaaaacacaaaagga 48650878  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagagg-aaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaacca 297  Q
    |||||| |||| |||||||||||||       |||  || ||||||| || ||||||||||| |  ||||||||||||||| ||||||||||||||||||    
T  48650879 aaaacttgatagatgtgaaaaccac-ttatacagattgaaagaaaaggggaaaaaaagatgtcgaggggtgattttaggtcaaaaaatgacctaaaacca 48650977  T
Q  298 tcccttctcgacgaatgaaagagaaaga 325  Q
     |||| ||||| ||| ||  ||||||||    
T  48650978 cccctcctcgatgaacgatggagaaaga 48651005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 295
Target Start/End: Original strand, 52923062 - 52923355
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| |  |||||||| |||| |||||||||||||||||||||||| || || || ||||||| | || | |||||||||| |||||||    
T  52923062 ttaagtcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgactaatatagatctttcaagaggaact 52923161  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaa-acacaataaga 200  Q
      || |||| || ||||||||||||||||||||| ||||||||| ||| ||||||||| ||||  | ||||| ||| ||||  ||||| |||||| | ||    
T  52923162 gaacaaacaccgcgacaaaacgcgaaatcaaacgccgcacaagacgacgaacaacacagcgccacacttagacgacaaaatcccaaaagacacaaaagga 52923261  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtcaaaaatgacctaaaac 295  Q
    |||||| |||| |||||||||||||       |||  || ||||||| |||||||||||||||  |||||||| ||||||||||||||| ||||||    
T  52923262 aaaacttgatagatgtgaaaaccac-ttatttagattgaaagaaaag-ggaaaaaagatgtagaggggtgattctaggtcaaaaatgacttaaaac 52923355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 212
Target Start/End: Complemental strand, 53099932 - 53099723
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||| | |||||  |||||||| |||  | |||||||||| |||||||||||||| ||||| ||||||| | |||  |||||||||||||||||||    
T  53099932 taagtcactggaattcacatgcttccggatatgtaacgttgacgcccaaatcattgattgaacttgtaattgactcatgctgatctttcaataggaacta 53099833  T
Q  104 tacgaacacgt-gacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaa 202  Q
     | ||| |||  ||||| ||| ||||||||||| |||||||||||||||||||||||||| |  ||||||| |||||||| |||||||||||| |  |||    
T  53099832 aatgaatacggcgacaagacgtgaaatcaaacgccgcacaagatgactaacaacacaacgtcacaattagacgacgaaatcacaaaaacacaaaagtaaa 53099733  T
Q  203 aactcgatat 212  Q
    |||| |||||    
T  53099732 aacttgatat 53099723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 325
Target Start/End: Original strand, 45568409 - 45568714
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaa 120  Q
    |||||||| |||| |||| ||||||||||||||||||| || || || ||||||| |||||| | | |||||| |||||||  || ||||| |||||||     
T  45568409 atgcttccggatctgcaaagttgacgtccaaatcattgtttgaatttgtaattgattgatgtagttatttcaacaggaactgaacaaacaccgtgacaag 45568508  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaa 220  Q
    ||||||||||||||| | ||||||| ||| ||||||||||||||| | ||||| |||||||| ||||||||| || |  ||||||| |||| ||||||||    
T  45568509 acgcgaaatcaaacgccacacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaacagaaaagaaaaaacttgatagatgtgaaa 45568608  T
Q  221 accacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccatcccttctcgacgaatgaaag 318  Q
    || ||       |||  || ||||||| |||||||||||||||  || | ||| ||| || |||||||||||||||||| |||| ||||| ||| ||| |    
T  45568609 acaac-ttatttagattgaaagaaaaggggaaaaaagatgtagatggattattctagatcaaaaaatgacctaaaaccacccctcctcgatgaacgaagg 45568707  T
Q  319 agaaaga 325  Q
    |||||||    
T  45568708 agaaaga 45568714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 189
Target Start/End: Original strand, 20608849 - 20609031
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    ||||||||||||| |||||||| |||| ||||| |||| |  ||||||||||||| ||||| ||| ||| | |||| ||| ||||||||||||||| ||     
T  20608849 tcaccgaaattctcatgcttccggatctgcaactttgatgctcaaatcattgattgaacttgtaaatgactaatgttgatatttcaataggaactaaaca 20608948  T
Q  108 aacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaa 189  Q
    ||||| | ||||| |||| |||||||| | ||||||||| ||||||||||||||||||| ||||||| |||||||| ||||||    
T  20608949 aacaccgcgacaagacgcaaaatcaaatgccgcacaagacgactaacaacacaacgccgcaattagacgacgaaatcacaaaa 20609031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 4 - 225
Target Start/End: Complemental strand, 40487467 - 40487244
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| | ||||||||| |||| |||| |||||||||||||||||||  | || |||  ||||| |||||| ||||||||||||||||||     
T  40487467 taagtcaccgaaatacctatgcttccggatctgcaatgttgacgtccaaatcattggctgaa-tttgtattgactgatgtagatctttcaataggaactg 40487369  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatc-aaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
     || |||| || ||||| |||||||||| ||||| ||||||||| ||| ||||||||||||||| | ||||| |||||||| || ||||| |||| ||||    
T  40487368 aacaaacaccgcgacaagacgcgaaatcaaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaatacaaaaaga 40487269  T
Q  201 aaaactcgatatatgtgaaaaccac 225  Q
    |||||| || | | |||||||||||    
T  40487268 aaaacttgaaagaagtgaaaaccac 40487244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 325
Target Start/End: Complemental strand, 21431756 - 21431444
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| |  |||||||| |||| |||||||||||||||||||| ||| || || || ||||||| |||||| ||||||||||||| || |    
T  21431756 ttaagtcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcgttggttgaatttgtaattgactgatgtagatctttcaatagaaatt 21431657  T
Q  103 atacgaacacgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaa 201  Q
      || |||||         | ||| |  ||||| ||||||||| ||| |||||||||| |||| | ||||| | |||||| || |||||||||| |||||    
T  21431656 gaacaaacac---------cacgaca--aaacgccgcacaagacgacgaacaacacaatgccgcacttagacggcgaaatcacaaaaaacacaaaaagaa 21431568  T
Q  202 aaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtcaaaaatgacctaaaaccatcc 300  Q
    ||||| |||| |||||||||||||       |||  || ||||||  |||||||||||||||  ||||||||||||||||||||||||||||||||| ||    
T  21431567 aaacttgatagatgtgaaaaccac-ttatttagattgaaagaaaatgggaaaaaagatgtagaggggtgattttaggtcaaaaatgacctaaaaccaccc 21431469  T
Q  301 cttctcgacgaatgaaagagaaaga 325  Q
    || ||||| ||| ||| ||||||||    
T  21431468 ctcctcgatgaacgaaggagaaaga 21431444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 190
Target Start/End: Complemental strand, 38545941 - 38545754
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||| ||||||  ||| || | ||||  ||||||||||| ||||||||||| || || || ||||||| |||||||||||||||||| | || ||    
T  38545941 taagtcacctaaattcgcatgttttcggatcttcaacgttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcaatggaaaata 38545842  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
     || ||||| | ||||| ||||||||||||||| ||||||||| ||| |||||||||||| |||| ||||| |||||||| |||||||    
T  38545841 aacaaacaccgcgacaagacgcgaaatcaaacgccgcacaagacgacgaacaacacaacgtcgtacttagacgacgaaatcacaaaaa 38545754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 293
Target Start/End: Original strand, 43488540 - 43488827
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    |||||||||| || |||||||| |||| ||||||||||||| |||||||||| || || || ||||||| | |||  ||| ||||||||| ||||  ||     
T  43488540 tcaccgaaatactcatgcttccggatctgcaacgttgacgttcaaatcattgcttgaatttataattgattaatgcagatatttcaatagaaactgaaca 43488639  T
Q  108 aacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaac 205  Q
    ||||| |  |||| ||||||||||||||| ||||||||| ||| ||||||||||||||  | ||||| |||||||| || ||||||||||    ||||||    
T  43488640 aacaccgcaacaagacgcgaaatcaaacgccgcacaagacgacgaacaacacaacgccacacttagacgacgaaatcacaaaaaacacaaatgaaaaaac 43488739  T
Q  206 tcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtcaaaaatgacctaaa 293  Q
    | |||| |||||||||||||       |||  || ||||||  |||||||||||||||  |||||||| ||||||||||| ||||||||    
T  43488740 ttgatagatgtgaaaaccac-ttatttagattgaaagaaaaagggaaaaaagatgtagaggggtgattctaggtcaaaaaagacctaaa 43488827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 308
Target Start/End: Complemental strand, 54149132 - 54148824
Alignment:
Q  5 aagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactat 104  Q
    |||||||||||||    |||||||| |||| |||||||||||| ||||||||||| |  || || ||| ||| |||||| |||||||||||||||||||     
T  54149132 aagtcaccgaaatagccatgcttccggatctgcaacgttgacgcccaaatcattggtgaaatttgtaa-tgattgatgtagatctttcaataggaactaa 54149034  T
Q  105 acgaaca-cgtgacaaaacgcgaaatcaaacgtcgcac-aagatgactaacaacacaacgccgtaattagatgacgaaat---aacaaaaacacaataag 199  Q
    || |||| || ||||| ||||||||||||| | |||||  ||| ||| |||||||||| |||| | ||||| ||||||||   || ||||| |||| |      
T  54149033 acaaacaccgcgacaatacgcgaaatcaaatgccgcacttagacgacgaacaacacaatgccgcacttagacgacgaaatcacaaaaaaaatacaaaaga 54148934  T
Q  200 aaaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaacca 297  Q
    ||||||| |||| |||||||||||||       |||  || |||||||||||||||||||||||  |||||||| |||||| ||||||||||||||||||    
T  54148933 aaaaacttgatagatgtgaaaaccac-ttatttagattgaaagaaaagaggaaaaaagatgtagaggggtgattgtaggtcaaaaaatgacctaaaacca 54148835  T
Q  298 tcccttctcga 308  Q
     |||| |||||    
T  54148834 cccctcctcga 54148824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 12050594 - 12050816
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||| ||||||| || ||| |||| |||| |||||||||||  ||||||||||| || || || |||||||  ||||| ||| || ||||||||||||    
T  12050594 taagtccccgaaatactcatgtttccggatctgcaacgttgacacccaaatcattggttgaatttgtaattgaccgatgtagatattccaataggaacta 12050693  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataaga-a 201  Q
     || ||||| | ||||| | | ||||||||||| ||||||||| ||| ||||||| |||||||   ||||| |||||||| |||||||||||| |||| |    
T  12050694 aacaaacaccgcgacaagaggagaaatcaaacgccgcacaagacgacgaacaacaaaacgccgcgcttagacgacgaaatcacaaaaacacaa-aagata 12050792  T
Q  202 aaactcgatatatgtgaaaaccac 225  Q
    ||||| |||| |||||||||||||    
T  12050793 aaacttgatagatgtgaaaaccac 12050816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 21533755 - 21533978
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  |||||||| |||| |||||||||||| |||||| |||| || || || || | || |||||| |||||||||||||||||||    
T  21533755 taagtcaccgaaatacccatgcttccggatctgcaacgttgacgcccaaattattggttgaatttgtagtcgactgatgtagatctttcaataggaacta 21533854  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataag-aa 201  Q
     || |||| || ||||| |||||||| |||||| || |||||| ||| ||||||||||||||| |  ||||  ||||||| ||||||| |  | ||| ||    
T  21533855 aacaaacaccgcgacaagacgcgaaaccaaacgccgtacaagacgacgaacaacacaacgccgcacatagacaacgaaatcacaaaaaaaatacaagaaa 21533954  T
Q  202 aaactcgatatatgtgaaaaccac 225  Q
    ||||| |||| |||||||||||||    
T  21533955 aaacttgatagatgtgaaaaccac 21533978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 3 - 211
Target Start/End: Complemental strand, 32701634 - 32701426
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||| ||||||| |  |||||||| ||||  ||||||||||| |||||||||||||| || || ||||||  |||||| ||||||||||||||||||    
T  32701634 ttaagtcgccgaaatacccatgcttccggatctacaacgttgacgcccaaatcattgattgaatttgtaattggttgatgtagatctttcaataggaact 32701535  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
      || |||| ||  |||||||||||||||||||| ||||||||| |||  |||| ||||||||| | ||||| |||||||  || |||||||||| | ||    
T  32701534 gaacaaacatcgcaacaaaacgcgaaatcaaacgccgcacaagacgac--acaatacaacgccgcacttagacgacgaaagcacaaaaaacacaaaagga 32701437  T
Q  201 aaaactcgata 211  Q
    |||||| ||||    
T  32701436 aaaacttgata 32701426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 3 - 325
Target Start/End: Complemental strand, 40556845 - 40556530
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    |||||||||| |||| |  |||||||| |||   ||||||||||||||||||||||| || || || ||||||| |||||| |||||||||| |||||||    
T  40556845 ttaagtcaccaaaatacacatgcttccggatttacaacgttgacgtccaaatcattggttgaatttgtaattgactgatgtagatctttcaagaggaact 40556746  T
Q  103 atacgaacacgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataaca-aaaacacaataagaa 201  Q
      || |||||         |||||||||||||| ||||||||| ||| ||||||||||||||| | ||||| |||||||| ||| ||||||||| | | |    
T  40556745 gaacaaacac---------cgcgaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacataaaacacaaaaggga 40556655  T
Q  202 aaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccatc 299  Q
    ||||| |||| || ||||||||||       | | | | ||||||| | ||||||||||| |  |||||||| |||||| |||||||||||||||||| |    
T  40556654 aaacttgatagatatgaaaaccac-ttatttatatcaaaagaaaagggaaaaaaagatgtggaggggtgattctaggtcaaaaaatgacctaaaaccacc 40556556  T
Q  300 ccttctcgacgaatgaaagagaaaga 325  Q
    ||| ||||| ||| ||| ||||||||    
T  40556555 cctcctcgatgaacgaatgagaaaga 40556530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 20464913 - 20465135
Alignment:
Q  1 atttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaa 100  Q
    ||||||||||||||||| || |||||| || ||| ||||| |||||| |||||||||| ||| || || ||||||| |||  |||||||||||||||||     
T  20464913 atttaagtcaccgaaatactcatgctttcaaatctgcaacattgacgcccaaatcatttattgaatttgtaattgactgaaatcgatctttcaataggat 20465012  T
Q  101 ctatacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataa 198  Q
     || | ||||| || ||||| |||| |||||||||| || |||||| ||| ||||||||||| ||  | ||||| || ||||| || |||||||||| |     
T  20465013 ttaaatgaacaccgcgacaagacgcaaaatcaaacgccgtacaagacgacgaacaacacaacacctcacttagacgatgaaatcacaaaaaacacaaaag 20465112  T
Q  199 gaaaaactcgatatatgtgaaaa 221  Q
    |||||||| ||||||||| ||||    
T  20465113 gaaaaacttgatatatgttaaaa 20465135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 189
Target Start/End: Complemental strand, 45425733 - 45425548
Alignment:
Q  5 aagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactat 104  Q
    ||||||||||||| |||||| |||| |||| |||| ||||| | |||||||||||||| || || ||||||| |||| ||||||||||||| |||||||     
T  45425733 aagtcaccgaaatacttatggttccggatctgcaatgttgaagcccaaatcattgattgaatttgtaattgattgatttcgatctttcaatgggaactaa 45425634  T
Q  105 acgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaa 189  Q
    || |||| || ||||| ||||||||||||||| |||| | || |||  |||||||| | ||||| ||| ||||| |||| ||||||    
T  45425633 acaaacaccgcgacaatacgcgaaatcaaacgccgcataggacgacggacaacacaccaccgtacttaaatgacaaaatcacaaaa 45425548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 225
Target Start/End: Complemental strand, 18011162 - 18010938
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||| |||||  | |||||||  |||| |||||||||||| |||| | ||||||| || || | ||||| | | |||||||||||||||| |||||    
T  18011162 taagtcactgaaatattcatgcttctggatctgcaacgttgacgcccaagtgattgattgaaattgttattgactaaagtcgatctttcaatagaaacta 18011063  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaa 201  Q
     ||||||| |||||||| | | ||||||||||| ||||||||||||  |||||||||||| |  | |||||| ||| ||| || |||||||||| | |||    
T  18011062 aacgaacaccgtgacaagatgtgaaatcaaacgccgcacaagatgatgaacaacacaacgtcacacttagataacggaatcacaaaaaacacaaaaggaa 18010963  T
Q  202 aaac-tcgatatatgtgaaaaccac 225  Q
    |||| | ||||||||||||||||||    
T  18010962 aaactttgatatatgtgaaaaccac 18010938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 8 - 163
Target Start/End: Complemental strand, 33580018 - 33579862
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    ||||||||||||   ||||||| ||||  ||||||||||| ||||||||||| || || || ||||||| ||||||||||||||||||| ||| || |||    
T  33580018 tcaccgaaattcacgtgcttccggatcttcaacgttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcaatatgaaataaacg 33579919  T
Q  108 aaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgc 163  Q
    |||| || ||||| |||| ||||||||||  |||||||| ||| |||||||||||||    
T  33579918 aacaccgcgacaagacgcaaaatcaaacgatgcacaagacgacgaacaacacaacgc 33579862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 47041994 - 47042182
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||| ||||||  |||||||| ||||  ||||||||||| ||||| ||||| || || || ||| ||| |||||  |||||||||||||||| ||    
T  47041994 taagtcaccaaaattcacatgcttccggatcttcaacgttgacgcccaaaccattggttgaatttgtaactgactgatgctgatctttcaataggaaata 47042093  T
Q  104 tacgaaca-cgtgac-aaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
     | ||||| ||  || |||||||||||||||||| ||||||||| ||| |||||||||||| |||| ||||| |||||||| |||||||    
T  47042094 aatgaacaccgctacaaaaacgcgaaatcaaacgccgcacaagacgacgaacaacacaacgtcgtacttagacgacgaaatcacaaaaa 47042182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 21313178 - 21313020
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| || ||| || |||||  || |||||||||||||||||||||||| || || ||||||| ||||  |||| ||||||||| |||||    
T  21313178 taagtcaccgaaatactcatgatttcagatatgctacgttgacgtccaaatcattgattgaatttgtaattgactgataccgatatttcaatagaaacta 21313079  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaac 161  Q
     ||||||| || ||||||||| ||||||||| |||  |||||| ||| |||||||||||    
T  21313078 aacgaacaccgcgacaaaacgtgaaatcaaaagtcagacaagacgacgaacaacacaac 21313020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 220
Target Start/End: Complemental strand, 43016997 - 43016780
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  |||| ||| |||| |||||||||||| ||||||||||| || || || ||||||| | | ||||||||||||  ||||||||    
T  43016997 taagtcaccgaaatgcacatgcatccggatctgcaacgttgacgcccaaatcattggttgaatttgtaattgactaacgtcgatctttcacaaggaacta 43016898  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaa 202  Q
     || |||| || ||||| || | |||||||||| | |||||||| || ||||||||||||||| | || || |||||||| ||||| | |||| | || |    
T  43016897 aacaaacaccgcgacaagacacaaaatcaaacgccacacaagataacgaacaacacaacgccgcacttggacgacgaaatcacaaacagacaaaaggata 43016798  T
Q  203 aactcgatatatgtgaaa 220  Q
    ||||  ||||||||||||    
T  43016797 aacttaatatatgtgaaa 43016780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 225
Target Start/End: Complemental strand, 47896276 - 47896071
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaa 120  Q
    |||||||| |||  ||||| || ||| ||||||||||| || || || ||||||| ||||||  |||||||||||||||||| || || | || |||||     
T  47896276 atgcttccggatatgcaacatttacgcccaaatcattggttgaatttgtaattgactgatgtaaatctttcaataggaactaaacaaataccgcgacaag 47896177  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaactcgatatatgtgaa 219  Q
    ||| ||||||||||| |||||||||  || ||||||||||||||  | || || |||||||| || |||||||||| |  ||||||| ||||||||||||    
T  47896176 acgtgaaatcaaacgccgcacaagacaacgaacaacacaacgccacactttgacgacgaaatcacaaaaaacacaaaagaaaaaacttgatatatgtgaa 47896077  T
Q  220 aaccac 225  Q
    ||||||    
T  47896076 aaccac 47896071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 297
Target Start/End: Original strand, 9797498 - 9797772
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaa 120  Q
    |||||||| |||| |||||||| |||| |||||||||| || || || ||||||| |||||| ||||||||||||||||||  || |||| || |||||     
T  9797498 atgcttccggatctgcaacgttaacgttcaaatcattgcttgaatttgtaattgattgatgtagatctttcaataggaactgaacaaacaccgcgacaag 9797597  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaactcgatatatgtgaa 219  Q
    |||| |||||||||| ||||||||| ||| |     ||||||||| | ||||| |||||||| || |||||||||| |  | ||||| |||| |||||||    
T  9797598 acgcaaaatcaaacgccgcacaagacgacga-----acaacgccgcacttagacgacgaaatcacaaaaaacacaaaagtagaaacttgatagatgtgaa 9797692  T
Q  220 aaccacnnnnnnnagaacgagagaaaagag-gaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaacca 297  Q
    ||||||       |||  || |||||||||  |||||||||||||  |||||||| |||||| ||||||||||||||||||    
T  9797693 aaccac-ttatttagattgaaagaaaagagaaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaacca 9797772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 70 - 195
Target Start/End: Complemental strand, 46220746 - 46220630
Alignment:
Q  70 taattgaatgatgtcgatctttcaataggaactatacgaacacgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaat 169  Q
    ||||||| |||||| ||| ||||||||||||||| ||||||||         ||||||||||||| || |||||||||||||||||||||||| || |||    
T  46220746 taattgactgatgttgatatttcaataggaactaaacgaacac---------cgcgaaatcaaacatcacacaagatgactaacaacacaacgtcgcaat 46220656  T
Q  170 tagatgacgaaataacaaaaacacaa 195  Q
    ||||||||||||| ||| ||||||||    
T  46220655 tagatgacgaaatcacataaacacaa 46220630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 79 - 225
Target Start/End: Original strand, 38860141 - 38860288
Alignment:
Q  79 gatgtcgatctttcaataggaactatacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgac 177  Q
    ||||| |||||| |||||||||||| || ||||| | ||||| |||||||||||| || ||||||||| ||| ||||||| |||| || | ||||| |||    
T  38860141 gatgtagatcttccaataggaactaaacaaacaccgcgacaagacgcgaaatcaatcgccgcacaagacgacgaacaacaaaacgtcgcacttagacgac 38860240  T
Q  178 gaaataacaaaaacacaataagaaaaactcgatatatgtgaaaaccac 225  Q
    ||||| ||||||||||||    ||||||| |||| |||||||||||||    
T  38860241 gaaatcacaaaaacacaaaggaaaaaacttgatagatgtgaaaaccac 38860288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 7448859 - 7448992
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| || |||||||| |||  |||||||||||||||||||||||| || || || ||||||| |||||| ||||||| || |||||||    
T  7448859 ttaagtcaccgaaatactcatgcttccggatatgcaacgttgacgtccaaatcattggttgaatttgtaattgactgatgtagatctttaaacaggaact 7448958  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacg 135  Q
      || |||| || ||||| ||| |||||||||||    
T  7448959 gaacaaacaccgagacaagacgtgaaatcaaacg 7448992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 7457001 - 7457134
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| || |||||||| |||  |||||||||||||||||||||||| || || || ||||||| |||||| ||||||| || |||||||    
T  7457001 ttaagtcaccgaaatactcatgcttccggatatgcaacgttgacgtccaaatcattggttgaatttgtaattgactgatgtagatctttaaacaggaact 7457100  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacg 135  Q
      || |||| || ||||| ||| |||||||||||    
T  7457101 gaacaaacaccgagacaagacgtgaaatcaaacg 7457134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 190
Target Start/End: Complemental strand, 37040911 - 37040724
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| || ||| ||| ||||| ||||| || ||  ||||||||||||||  | || |||||||  |||||| |||||||||||| |||||    
T  37040911 taagtcaccgaaatactcatgtttctagatcggcaacattcacacccaaatcattgattggatttataattgaccgatgtcaatctttcaatagaaacta 37040812  T
Q  104 tacgaac-acgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
     ||||||  || ||||| ||| ||||||||||| ||||||||| ||| | ||||||| ||  ||| ||||| ||| |||| |||||||    
T  37040811 aacgaacgccgcgacaagacgtgaaatcaaacgccgcacaagacgacgaccaacacagcgttgtacttagacgacaaaatcacaaaaa 37040724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 116 - 225
Target Start/End: Complemental strand, 9320086 - 9319976
Alignment:
Q  116 acaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaat-aacaaaaacacaataagaaaaactcgatatat 214  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| |||| | |||||  ||||||| |  |||||||||| | |||||||| |||| ||    
T  9320086 acaaaacgcaaaatcaaacgtcgcacaagacgacgaacaacacaatgccgcatttagacaacgaaatcataaaaaacacaaaaggaaaaacttgatagat 9319987  T
Q  215 gtgaaaaccac 225  Q
    |||||||||||    
T  9319986 gtgaaaaccac 9319976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 224
Target Start/End: Complemental strand, 19339300 - 19339095
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaac-acgtgacaaa 120  Q
    |||||||  |||| ||||| |||||  | |||||||||||| || || ||||||| | | || ||||||||||||||||||| ||||||  |  |||||     
T  19339300 atgcttctggatctgcaacattgacacctaaatcattgattgaatttgtaattgactaaagttgatctttcaataggaactaaacgaacgccacgacaag 19339201  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataaca-aaaacacaataagaaaaac-tcgatatatgtga 218  Q
    ||| ||||| ||||| |||||||| |||| |||||||||||| |  | ||||| ||| |||| ||| ||||||||| | ||||||| | |||||||||||    
T  19339200 acgtgaaattaaacgccgcacaagttgacgaacaacacaacgtcacacttagacgacaaaatcacataaaacacaaaaggaaaaactttgatatatgtga 19339101  T
Q  219 aaacca 224  Q
    ||||||    
T  19339100 aaacca 19339095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 325
Target Start/End: Complemental strand, 4821710 - 4821626
Alignment:
Q  243 aaaagaggaaaaaagatgtagcgg-gtgattttaggtcaaaaa-tgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    ||||||||||||  |||| || || |||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  4821710 aaaagaggaaaatggatgcagaggagtgattataggtcaaaaaatgacctaaaaccaccccttctcgacgaatgaaagagaaaga 4821626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 48199919 - 48199811
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  |||||||  |||  ||||||| ||||||||||||||||||| || || ||||||| ||| || ||||||||||||||||| |    
T  48199919 taagtcaccgaaatgcacatgcttctggatttgcaacgtcgacgtccaaatcattgattaaatttataattgattgaagttgatctttcaataggaacca 48199820  T
Q  104 tacgaacac 112  Q
     ||||||||    
T  48199819 aacgaacac 48199811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 45424939 - 45424809
Alignment:
Q  5 aagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactat 104  Q
    ||||||||||| | |  ||| |||| |||| |||| ||||||| |||||||||||||| || || |||||||  ||||||||| |||||||||||||||     
T  45424939 aagtcaccgaagtacccatgattccggatctgcaatgttgacgcccaaatcattgattgaatttgtaattgaccgatgtcgatttttcaataggaactaa 45424840  T
Q  105 acgaaca-cgtgacaaaacgcgaaatcaaac 134  Q
    || |||| ||  |||| ||||||||||||||    
T  45424839 acaaacaccgcaacaatacgcgaaatcaaac 45424809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 46304466 - 46304574
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  |||||||| |||| |||| ||||||| | ||||||||| || || || ||||||| |||||| ||| |||||||||||||||    
T  46304466 taagtcaccgaaatacccatgcttccggatctgcaatgttgacgcctaaatcattggttgaatttgtaattgactgatgtagatatttcaataggaacta 46304565  T
Q  104 tacgaacac 112  Q
     || |||||    
T  46304566 aacaaacac 46304574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 325
Target Start/End: Complemental strand, 29239232 - 29239158
Alignment:
Q  251 aaaaaagatgtagcgggtgattttaggtc-aaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    ||||||||||||| |||||||| ||| || |||||||||||||||||| || |||||||| |||||||||||||||    
T  29239232 aaaaaagatgtagggggtgattctagatcaaaaaatgacctaaaacca-cctttctcgacaaatgaaagagaaaga 29239158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 224
Target Start/End: Original strand, 31271773 - 31271975
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaa 120  Q
    |||||||| |||| |||  ||||||| ||||||| |||||| || || |  || | ||| ||||||||||| ||| |||||| |||||  | | |||||     
T  31271773 atgcttccggatctgcattgttgacgcccaaatctttgattgaatttgt--ttaactgaagtcgatctttccatatgaactaaacgaatgccgcgacaag 31271870  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaactcgatatatgtgaa 219  Q
    ||||||||||||| | ||||||||| ||| ||||||||||  ||| | ||||| || ||||| || |||||||||| |  ||||||| |||| |||||||    
T  31271871 acgcgaaatcaaatgccgcacaagacgacgaacaacacaaaaccgcacttagacgaagaaatcacaaaaaacacaaaagaaaaaacttgataaatgtgaa 31271970  T
Q  220 aacca 224  Q
    |||||    
T  31271971 aacca 31271975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 116 - 225
Target Start/End: Original strand, 36910700 - 36910810
Alignment:
Q  116 acaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac--aaaaacacaataagaaaaactcgatata 213  Q
    |||| ||||||||||||||| ||||||||| ||| ||||||| ||||||| | ||||| | |||||| ||  |||||||||  | |||||||| |||| |    
T  36910700 acaagacgcgaaatcaaacgccgcacaagacgacgaacaacaaaacgccgcacttaga-ggcgaaatcacaaaaaaacacagaaggaaaaacttgataga 36910798  T
Q  214 tgtgaaaaccac 225  Q
    ||||||||||||    
T  36910799 tgtgaaaaccac 36910810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 14859614 - 14859416
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaa 120  Q
    |||||||  |||| ||||||||||||||||||||||||||| ||  | | ||||| ||| |  |||||||||||| |||| | | ||||| ||  ||||     
T  14859614 atgcttctggatctgcaacgttgacgtccaaatcattgattgaatatgtgattgattgaagctgatctttcaatatgaaccaaatgaacaccgcaacaag 14859515  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa--cacaataagaaaaactcgatatatgtg 217  Q
    | || |||| ||| ||| ||||||||||| ||||||||||| ||| | | ||| | |||||| |||||||  ||||| |  ||||||| ||||||||||    
T  14859514 atgcaaaattaaatgtcacacaagatgacgaacaacacaacaccgcactcagacggcgaaatcacaaaaagtcacaaaagaaaaaacttgatatatgtg 14859416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 26275812 - 26275895
Alignment:
Q  51 aaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaaacgcgaaatcaaa 133  Q
    |||||||||||| || || ||  ||| |||||||||||||||| ||||||||| ||||||| || ||||| |||||||||||||    
T  26275812 aaatcattgattgaatttgtatatgactgatgtcgatctttcactaggaactaaacgaacatcgcgacaagacgcgaaatcaaa 26275895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 225
Target Start/End: Original strand, 44960010 - 44960121
Alignment:
Q  115 gacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa-cacaataagaaaaactcgatata 213  Q
    |||||||||| |||||||||| ||||||||| ||| || || ||||| ||| | ||||| |||||||| ||||||| || || | ||||||||  ||| |    
T  44960010 gacaaaacgcaaaatcaaacgccgcacaagacgacgaataatacaacaccgcacttagacgacgaaatcacaaaaaacataaaaggaaaaacttaataga 44960109  T
Q  214 tgtgaaaaccac 225  Q
    ||||||||||||    
T  44960110 tgtgaaaaccac 44960121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 50194493 - 50194550
Alignment:
Q  266 ggtgattttaggtcaaaaa-tgacctaaaaccatcccttctcgacgaatgaaagagaa 322  Q
    ||||||||||||||||||| ||| |||||||||  |||||||||||| ||||||||||    
T  50194493 ggtgattttaggtcaaaaaatgatctaaaaccactccttctcgacgagtgaaagagaa 50194550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 325
Target Start/End: Original strand, 20609091 - 20609167
Alignment:
Q  251 aaaaaagatgtagcgggt-gattttaggtcaaaaa-tgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    ||||||||||||| |||| |||||||||||||||| | || ||||| || |||| ||||||||||||| ||||||||    
T  20609091 aaaaaagatgtagagggttgattttaggtcaaaaaataacttaaaatcacccctcctcgacgaatgaaggagaaaga 20609167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 325
Target Start/End: Complemental strand, 29921931 - 29921871
Alignment:
Q  267 gtgattttaggtcaaaaa-tgacctaaaa-ccatcccttctcgacgaatgaaagagaaaga 325  Q
    |||||||||| ||||||| |||||||||| ||| |||| ||||||||||||||||||||||    
T  29921931 gtgattttagctcaaaaaatgacctaaaaaccacccctcctcgacgaatgaaagagaaaga 29921871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 325
Target Start/End: Complemental strand, 29971084 - 29971024
Alignment:
Q  267 gtgattttaggtcaaaaa-tgacctaaaa-ccatcccttctcgacgaatgaaagagaaaga 325  Q
    |||||||||| ||||||| |||||||||| ||| |||| ||||||||||||||||||||||    
T  29971084 gtgattttagctcaaaaaatgacctaaaaaccacccctcctcgacgaatgaaagagaaaga 29971024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 325
Target Start/End: Original strand, 51303825 - 51303908
Alignment:
Q  243 aaaagaggaaaaaagatgtagcgggtgattttaggtcaaaaa-tgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    ||||| |||||||||||| || |||||||| ||||||||||| |||| ||||| ||||||| ||||| || | |||||| ||||    
T  51303825 aaaaggggaaaaaagatgcagagggtgattctaggtcaaaaattgacataaaatcatccctcctcgatgagtaaaagaggaaga 51303908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 225
Target Start/End: Complemental strand, 1649513 - 1649339
Alignment:
Q  52 aatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacacgtga-caaaacgcgaaatcaa--acgtcgcacaagatga 148  Q
    ||||||||||| ||  | ||||||  ||| |||||||||||||||||||||| | |||||| | | ||| ||||||||||||  ||  ||||||||| |     
T  1649513 aatcattgattaaatctgtaattgtctgaagtcgatctttcaataggaactaaaagaacacatcaacaagacgcgaaatcaacaacaccgcacaagacgg 1649414  T
Q  149 ctaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaaaccac 225  Q
      ||||| ||||||||  | | ||| |||||||| ||||||| |  | ||||||| || ||||||||||||||||||    
T  1649413 agaacaatacaacgccacactcagacgacgaaatcacaaaaaaa--acaagaaaatcttgatatatgtgaaaaccac 1649339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 46220581 - 46220519
Alignment:
Q  243 aaaagaggaaaaaagatgtagcgg-gtgattttaggtcaaaaatgacctaaaaccatcccttc 304  Q
    ||||||||||||||||||||  || || |||||| || |||||||||||||||||| ||||||    
T  46220581 aaaagaggaaaaaagatgtaaaggagtaattttatgttaaaaatgacctaaaaccaccccttc 46220519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 36734621 - 36734678
Alignment:
Q  5 aagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatt 62  Q
    |||| |||||||| || |||| |||||||| |||||||||||| ||||||| ||||||    
T  36734621 aagtaaccgaaatactcatgcctccagatctgcaacgttgacgcccaaatctttgatt 36734678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 53807836 - 53807901
Alignment:
Q  36 gcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaac 101  Q
    ||||||||||||||||||||||||||| ||  | | ||||| ||| || |||||||||||| ||||    
T  53807836 gcaacgttgacgtccaaatcattgattgaatctgtgattgactgaagttgatctttcaatatgaac 53807901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 323
Target Start/End: Original strand, 7449086 - 7449170
Alignment:
Q  241 agaaaagaggaaaaaagatgtagcggg-tgattttaggtc-aaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaa 323  Q
    ||||||||||||||||||||||| |||  |||| || ||| |||||||||||||||||| |||| ||  | ||| ||||||||||    
T  7449086 agaaaagaggaaaaaagatgtagagggacgattctatgtcaaaaaatgacctaaaaccagccctccttaatgaacgaaagagaaa 7449170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 323
Target Start/End: Original strand, 7457228 - 7457312
Alignment:
Q  241 agaaaagaggaaaaaagatgtagcggg-tgattttaggtc-aaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaa 323  Q
    ||||||||||||||||||||||| |||  |||| || ||| |||||||||||||||||| |||| ||  | ||| ||||||||||    
T  7457228 agaaaagaggaaaaaagatgtagagggacgattctatgtcaaaaaatgacctaaaaccagccctccttaatgaacgaaagagaaa 7457312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 19619855 - 19619784
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattga 76  Q
    ||||||||||||||||| |||||| | ||||  ||||||||||  | |||||||||||| ||||| |||||||    
T  19619855 taagtcaccgaaattctcatgctt-cggatctacaacgttgacacctaaatcattgattgaacttgtaattga 19619784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 20465177 - 20465237
Alignment:
Q  265 gggtgattttaggtcaaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    |||||||| || |||||||||||| |||||||| |||| || || ||||||| ||||||||    
T  20465177 gggtgattctatgtcaaaaatgacataaaaccacccctacttgatgaatgaaggagaaaga 20465237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 42460623 - 42460567
Alignment:
Q  268 tgattttaggtcaaaaa-tgacctaaaaccatcccttctcgacgaatgaaagagaaa 323  Q
    ||||||||||||||||| |||||||||| ||||||| |||||  | |||||||||||    
T  42460623 tgattttaggtcaaaaactgacctaaaatcatccctcctcgataagtgaaagagaaa 42460567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 51923851 - 51923811
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatt 62  Q
    |||||||  |||| |||||||||||||||||||||||||||    
T  51923851 atgcttctggatctgcaacgttgacgtccaaatcattgatt 51923811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 53508101 - 53508069
Alignment:
Q  265 gggtgattttaggtcaaaaatgacctaaaacca 297  Q
    |||||||||||||||||||||||||||| ||||    
T  53508101 gggtgattttaggtcaaaaatgacctaagacca 53508069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 9e-55; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 3 - 325
Target Start/End: Original strand, 33053113 - 33053438
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||| ||||| |  |||||||| |||| ||||||||||||| |||||||||| || || || ||||||| |||||| |||||||||| |||||||    
T  33053113 ttaagtcactgaaatacccatgcttccggatctgcaacgttgacgttcaaatcattggttgaatttgtaattgactgatgtagatctttcaagaggaact 33053212  T
Q  103 atacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
      || ||||| | ||||||||||||||||||||| ||||||||| ||| ||||||||||||||| | ||||| |||||||| || |||||||||| | ||    
T  33053213 gaacaaacaccgcgacaaaacgcgaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaacacaaaagga 33053312  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtagcggg-tgattttaggtc-aaaaatgacctaaaaccat 298  Q
    |||||| |||| |||||||||||||       |||  || ||||||| ||||||||||||||| ||| ||||| |||||| ||||||||||||||||||     
T  33053313 aaaacttgatagatgtgaaaaccac-ttatttagattgaaagaaaaggggaaaaaagatgtagagggatgattctaggtcaaaaaatgacctaaaaccac 33053411  T
Q  299 cccttctcgacgaatgaaagagaaaga 325  Q
    |||| ||||| ||| ||| ||||||||    
T  33053412 ccctcctcgatgaacgaaggagaaaga 33053438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 3 - 325
Target Start/End: Complemental strand, 606349 - 606024
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| |  ||| |||| |||| |||||||||| ||||||||||||| || || || ||||||| |||||| ||||||||||||||||||    
T  606349 ttaagtcaccgaaatacccatgtttccggatctgcaacgttgatgtccaaatcattggttgaatttataattgactgatgtagatctttcaataggaact 606250  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaa-aacacaataaga 200  Q
      || |||| || ||||||| ||||||||||||| ||||||||||||| ||||||||||||||| | ||||| |||||||| ||||| ||||||| | ||    
T  606249 gaacaaacaccgcgacaaaatgcgaaatcaaacgccgcacaagatgacgaacaacacaacgccgcacttagacgacgaaatcacaaataacacaaaagga 606150  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccat 298  Q
    |||| | |||| |||||||||||||       |||  || ||||||| |||||||||||||||  |||||||  |||||| ||||||||| ||||| ||     
T  606149 aaaatttgatagatgtgaaaaccac-ttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgatcctaggtcaaaaaatgacataaaatcac 606051  T
Q  299 cccttctcgacgaatgaaagagaaaga 325  Q
    |||| ||||| ||| ||| ||||||||    
T  606050 ccctcctcgatgaacgaaggagaaaga 606024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 3 - 325
Target Start/End: Complemental strand, 23128763 - 23128438
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| |  |||||||| ||||  |||||||||| ||||||||||||||| || || ||||||| |||||| |||||||||||| |||||    
T  23128763 ttaagtcaccgaaatacccatgcttccggatctacaacgttgacatccaaatcattgattgaatttgtaattgactgatgttgatctttcaataagaact 23128664  T
Q  103 atacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
      || ||||| | ||||||||||||||||||||| | ||||||| ||| ||||||||||||||| | ||||| || ||||| || ||||| |||| | ||    
T  23128663 gaacaaacactgcgacaaaacgcgaaatcaaacgccacacaagacgacgaacaacacaacgccgcacttagacgatgaaatcacaaaaaatacaaaagga 23128564  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccat 298  Q
    |||||| |||| |||||||||||||       |||| || ||||||  || ||||||||||||  |||||||| |||||| |||||||||||||||| ||    
T  23128563 aaaacttgatagatgtgaaaaccac-ttatttagaatgaaagaaaatggggaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaactat 23128465  T
Q  299 cccttctcgacgaatgaaagagaaaga 325  Q
    |||| ||| | ||| ||| ||||||||    
T  23128464 ccctcctcaatgaacgaaggagaaaga 23128438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 8 - 225
Target Start/End: Complemental strand, 127809 - 127591
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    |||||||||| || ||||||||  ||| |||||||||||| |||||||||||||  || || ||||||| |||||||||||||||||||||||||| | |    
T  127809 tcaccgaaatactcatgcttccgaatctgcaacgttgacgcccaaatcattgatcgaatttgtaattgactgatgtcgatctttcaataggaactaaatg 127710  T
Q  108 aaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaac 205  Q
    |||| || ||| ||||||||||||||| ||| ||||||| ||| ||||||||||||| | | ||||| |||||||| || |||||||||| | |||||||    
T  127709 aacaccgcgac-aaacgcgaaatcaaatgtcacacaagacgacgaacaacacaacgctgcacttagacgacgaaatcacaaaaaacacaaaaggaaaaac 127611  T
Q  206 tcgatatatgtgaaaaccac 225  Q
    | ||||||||||||||||||    
T  127610 ttgatatatgtgaaaaccac 127591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 8 - 225
Target Start/End: Original strand, 3913524 - 3913743
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    |||||||||| |  |||||||  |||| |||||||||||||| ||||||||| || || || ||||||| |||||| ||||||||||||||||||  ||     
T  3913524 tcaccgaaatacccatgcttctggatctgcaacgttgacgtctaaatcattgcttgaatttgtaattgattgatgtagatctttcaataggaactgaaca 3913623  T
Q  108 aacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaac 205  Q
    ||||| | ||||| |||||||||||||||| |||||||| ||| ||||||||||||||| | ||||| ||||||||||| |||||||||| |  ||||||    
T  3913624 aacaccgcgacaagacgcgaaatcaaacgttgcacaagacgacgaacaacacaacgccgcacttagacgacgaaataacaaaaaacacaaaagaaaaaac 3913723  T
Q  206 tcgatatatgtgaaaaccac 225  Q
    | |||| |||||||||||||    
T  3913724 ttgatagatgtgaaaaccac 3913743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 4 - 225
Target Start/End: Complemental strand, 34018704 - 34018481
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||| ||||| || |||||||| |||| |||||||||||| ||||||||||  || || || ||||| | |||| |||||||||||||||||||||    
T  34018704 taagtcactgaaatactcatgcttccggatctgcaacgttgacgcccaaatcattagttgaatttgtaattaactgatctcgatctttcaataggaacta 34018605  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaa 201  Q
     ||||||| || ||||| ||  ||||||||||||| ||||||| ||| ||||||||||||||  | ||||| |||||||| || |||||||||| |  ||    
T  34018604 aacgaacaccgcgacaagacatgaaatcaaacgtctcacaagacgacgaacaacacaacgccacacttagacgacgaaatcacaaaaaacacaaaagaaa 34018505  T
Q  202 aaactcgatatatgtgaaaaccac 225  Q
    ||||| ||||||||||||||||||    
T  34018504 aaacttgatatatgtgaaaaccac 34018481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 4 - 300
Target Start/End: Original strand, 30608461 - 30608757
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  ||| ||||||||| |||||||||||  ||||||||||| || || || ||||||| | ||||||||||||||||||||||||    
T  30608461 taagtcaccgaaatacccatgattccagatctgcaacgttgacacccaaatcattggttgaatttgtaattgacttatgtcgatctttcaataggaacta 30608560  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaa-ttagatgacgaaataac-aaaaacacaataaga 200  Q
     | |||||| | ||| |||||| |||||||||| ||||||||| ||| |||||||||||| ||||| ||||| |||||||| || ||||| |||| ||      
T  30608561 aatgaacacagcgac-aaacgcaaaatcaaacgccgcacaagacgacgaacaacacaacgacgtaacttagacgacgaaatcacaaaaaatacaa-aatg 30608658  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtcaaaaatgacctaaaaccatc 299  Q
    |||||| ||||||||||||||||||       |||  || ||||||| |  ||||| ||||||  |||||||| ||||||||||||||||||||||||||    
T  30608659 aaaacttgatatatgtgaaaaccac-taatttagattgaaagaaaag-gagaaaaatatgtagaggggtgattctaggtcaaaaatgacctaaaaccatc 30608756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 7515148 - 7515370
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||||| || |  |||||||| |||  |||||||||||| | ||||||||| || || || ||||||| |||||| ||| || ||||||||||||    
T  7515148 taagtcaccgacatacacatgcttccggatttgcaacgttgacgcctaaatcattggttgaatttgtaattgagtgatgtagatattccaataggaacta 7515247  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaa- 201  Q
     || ||||| | ||||| ||||||||||||||||||| ||||| ||| ||||||| ||||||| | ||||| |||||||| |||||||||||| |||||     
T  7515248 aacaaacaccgcgacaagacgcgaaatcaaacgtcgcccaagacgacgaacaacaaaacgccgcacttagacgacgaaatcacaaaaacacaa-aagaag 7515346  T
Q  202 aaactcgatatatgtgaaaaccac 225  Q
    ||||| |||| |||||||||||||    
T  7515347 aaacttgatagatgtgaaaaccac 7515370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 182
Target Start/End: Complemental strand, 3355261 - 3355082
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||| ||||| || |||||||| |||| |||| |||||||||||||||||| ||| || || ||||||| ||||||||| ||||||||||||||||    
T  3355261 taagtcactgaaatactcatgcttccggatctgcaaagttgacgtccaaatcattcattgaatttataattgactgatgtcgacctttcaataggaacta 3355162  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaat 182  Q
     ||||||| |   |||| ||||||||||||||||| ||||||| ||| ||||||||||| ||| | ||||| || |||||    
T  3355161 aacgaacaccacaacaagacgcgaaatcaaacgtcacacaagaggacgaacaacacaacaccgcacttagacgatgaaat 3355082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 325
Target Start/End: Original strand, 67946 - 68270
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||| ||||||| |  ||| |||| |||| |||||||| |||| |||||| ||| || || || ||||||| |||||| ||||||||| ||||||||    
T  67946 ttaagtcgccgaaatacccatgtttccggatctgcaacgttaacgtacaaatcgttggttgaatttgtaattgactgatgtagatctttcattaggaact 68045  T
Q  103 atacgaacacgt-gacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
      || |||||   ||||||||||||||||||||| ||||||||| |   || |||||||| ||  | ||||| |||||||| || |||||||||| | ||    
T  68046 gaacaaacaccacgacaaaacgcgaaatcaaacgccgcacaagacggtgaataacacaacaccacacttagacgacgaaatcacaaaaaacacaaaagga 68145  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgt--agcgggtgattttaggtcaaaaatgacctaaaaccat 298  Q
    |||||| |||| |||||||||||||       |||   | ||||||| || ||||||||||  || |||||||| |||||||||||| ||||||||||||    
T  68146 aaaacttgatagatgtgaaaaccac-ttatttagattaaaagaaaag-gggaaaaagatgtagagggggtgattctaggtcaaaaattacctaaaaccat 68243  T
Q  299 cccttctcgacgaatgaaagagaaaga 325  Q
    |||| ||||| ||| ||| ||||||||    
T  68244 ccctcctcgatgaacgaaggagaaaga 68270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 225
Target Start/End: Original strand, 32327181 - 32327386
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaa 120  Q
    |||||||| |||| |||||||| ||||| ||||||||| || || || ||||||| |||||| ||||||||||||| || |  |  ||||| | |||||     
T  32327181 atgcttccggatctgcaacgttaacgtcaaaatcattgcttgaatttgtaattgattgatgtagatctttcaatagaaattgaataaacaccgcgacaag 32327280  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaactcgatatatgtgaa 219  Q
    ||||||||||||||| ||||||||| ||| ||||||||||||||| | |||||  | ||||| || |||||||||| | |||||||| |||| |||||||    
T  32327281 acgcgaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagactatgaaatcacaaaaaacacaaaaggaaaaacttgatagatgtgaa 32327380  T
Q  220 aaccac 225  Q
    ||||||    
T  32327381 aaccac 32327386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 190
Target Start/End: Original strand, 29319823 - 29320011
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    |||||||||| |||| |  |||||||| |||  ||||||||||||| |||||||||| || || || ||||||| |||||| |||||||||||| ||| |    
T  29319823 ttaagtcaccaaaatacacatgcttccggatttgcaacgttgacgttcaaatcattggttgaatttgtaattgactgatgtagatctttcaatatgaagt 29319922  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
      || |||| || ||||| ||||||||||||||| |||| |||| ||| ||||||||||||||| | ||||| ||| |||| |||||||    
T  29319923 taacaaacaccgcgacaagacgcgaaatcaaacgccgcataagaggacgaacaacacaacgccgcacttagacgacaaaatcacaaaaa 29320011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 29255392 - 29255551
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  ||| |||| |||| | |||||||||| |||||||||||||| || || ||||||| |||||  |||||||||||||||||||    
T  29255392 taagtcaccgaaatacccatgtttccggatctgtaacgttgacgcccaaatcattgattgaatttgtaattgactgatgaagatctttcaataggaacta 29255491  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgc 163  Q
     ||||||| || || || || | ||||||||||| |||||||| ||| |||||||||||||    
T  29255492 aacgaacaccgcgataagacac-aaatcaaacgttgcacaagacgacgaacaacacaacgc 29255551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 12170608 - 12170474
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    |||||||||| |  |||||||| |||| ||||||||||| |||||||||||| || || || ||||||| |||||| ||||||||||||||||||  ||     
T  12170608 tcaccgaaatacccatgcttccggatctgcaacgttgacatccaaatcattgcttgaatttgtaattgattgatgtagatctttcaataggaactgaaca 12170509  T
Q  108 aaca-cgtgacaaaacgcgaaatcaaacgtcgcac 141  Q
    |||| || ||||| ||||||||||||||| |||||    
T  12170508 aacaccgcgacaagacgcgaaatcaaacgccgcac 12170474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 30894710 - 30894602
Alignment:
Q  38 aacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaaacgcgaaatcaaacgt 136  Q
    |||||||||| ||||||||||| || || || ||||||| ||||||||||||||||||| |||||| ||||||| || | ||| ||||||||||||||||    
T  30894710 aacgttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcaatatgaactaaacgaacaccgcggcaagacgcgaaatcaaacgt 30894611  T
Q  137 cgcacaaga 145  Q
    |||| ||||    
T  30894610 cgcaaaaga 30894602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 159 - 325
Target Start/End: Complemental strand, 12170483 - 12170315
Alignment:
Q  159 aacgccgtaattagatgacgaaataacaaaaa-cacaataagaaaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaag 257  Q
    ||||||| | ||||| |||||||| ||||||| ||||| | |||||||| |||| |||||||||||||       |||  || ||||||| |||||||||    
T  12170483 aacgccgcacttagacgacgaaatcacaaaaaacacaaaacgaaaaacttgatagatgtgaaaaccacttattt-agattgaaagaaaaggggaaaaaag 12170385  T
Q  258 atgtagcggg-tgattttaggtcaaaaa-tgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    |||||| ||| ||||| ||||||||||| ||||||||||||| |||| ||||| ||| ||| ||||||||    
T  12170384 atgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaaga 12170315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 11321461 - 11321523
Alignment:
Q  50 caaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac 112  Q
    ||||| ||||||| || || ||||||| |||||||||||||||||||||||||| ||||||||    
T  11321461 caaataattgattgaatttgtaattgactgatgtcgatctttcaataggaactaaacgaacac 11321523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 162
Target Start/End: Original strand, 24227695 - 24227837
Alignment:
Q  21 tatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaa 119  Q
    ||||||||  |||| | |||||||| || ||||||||||||| || || ||||||| ||| |||||| |||||||| ||| || | ||||| ||||| ||    
T  24227695 tatgcttcaggatctggaacgttgaggttcaaatcattgattgaaattgtaattgactgaagtcgatatttcaatatgaattaaatgaacaccgtgataa 24227794  T
Q  120 aacgcgaaatcaaacgtcgcacaagatgactaacaacacaacg 162  Q
     ||| ||||||||||| | ||||| |  || ||||||||||||    
T  24227795 gacgtgaaatcaaacgccacacaacacaacaaacaacacaacg 24227837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 28981050 - 28981001
Alignment:
Q  274 taggtcaaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaa 323  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  28981050 taggtcaaaaatgacctaaaaccaaccctattcgacgagtgaaagagaaa 28981001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 4010458 - 4010553
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaa 100  Q
    |||||||||||||| || |||||||| |||| |||||||  ||  |||||||||||||| ||  | ||||||| |||| | ||||||||||||||||    
T  4010458 taagtcaccgaaatactcatgcttccggatctgcaacgtcaacacccaaatcattgattgaatatgtaattgattgatat-gatctttcaataggaa 4010553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 545927 - 545845
Alignment:
Q  244 aaagaggaaaaaagatgtagcgg-gtgattttaggtcaaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    |||| |||||||||||||||  | |||||| ||||||||||||| ||||||| || |||| ||||| || |||||||| ||||    
T  545927 aaaggggaaaaaagatgtagaagagtgattctaggtcaaaaatggcctaaaatcacccctcctcgatgagtgaaagaggaaga 545845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 325
Target Start/End: Original strand, 7976376 - 7976434
Alignment:
Q  267 gtgattttaggtcaaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    |||||| |||||||||||||||||||||||| || | ||||| || ||||| |||||||    
T  7976376 gtgattctaggtcaaaaatgacctaaaaccacccatgctcgatgagtgaaaaagaaaga 7976434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 325
Target Start/End: Original strand, 29320046 - 29320132
Alignment:
Q  241 agaaaagaggaaaaaagatgtag-cgggtgattttaggtcaaaa-atgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    ||||||| |||||||||||||||  |||||||| ||| |||||| |||||||||||||| || | ||||| ||| ||| ||||||||    
T  29320046 agaaaaggggaaaaaagatgtagaggggtgattctagatcaaaatatgacctaaaaccacccatcctcgatgaacgaaggagaaaga 29320132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 30493658 - 30493568
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac 112  Q
    |||||||| |||  ||||||||||||||||||||||||||| ||  |   ||||| ||| || |||||||||||| |||| | ||||||||    
T  30493658 atgcttccggatttgcaacgttgacgtccaaatcattgattgaatatgagattgactgaagttgatctttcaatatgaaccaaacgaacac 30493568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 1933660 - 1933696
Alignment:
Q  26 ttccagatcagcaacgttgacgtccaaatcattgatt 62  Q
    |||| |||| |||||||||||||||||||||||||||    
T  1933660 ttccggatctgcaacgttgacgtccaaatcattgatt 1933696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 20220904 - 20220860
Alignment:
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccg 165  Q
    ||||||||||||||| ||||||||| ||| ||||||| |||||||    
T  20220904 acgcgaaatcaaacgccgcacaagacgacgaacaacaaaacgccg 20220860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 22114888 - 22114844
Alignment:
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccg 165  Q
    ||||||||||||||| ||||||||| ||| ||||||| |||||||    
T  22114888 acgcgaaatcaaacgccgcacaagacgacgaacaacaaaacgccg 22114844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 30776680 - 30776594
Alignment:
Q  132 aacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac--aaaaacacaataagaaaaactcgatatatgtg 217  Q
    |||| ||||||||||||| |||||||||||| || | | ||| |||||||| ||  |||||||||| |||||||||| ||| ||||||    
T  30776680 aacgccgcacaagatgacgaacaacacaacgtcgcactaagacgacgaaatcacgaaaaaacacaa-aagaaaaacttgatgtatgtg 30776594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 31852136 - 31852200
Alignment:
Q  1 atttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaa 65  Q
    |||||| |||||  ||| || |||||||| |||| ||||| ||||||| ||||||||||||||||    
T  31852136 atttaaatcaccagaatactcatgcttccggatctgcaactttgacgttcaaatcattgatttaa 31852200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 32059934 - 32059894
Alignment:
Q  122 cgcgaaatcaaacgtcgcacaagatgactaacaacacaacg 162  Q
    |||||||||||||| ||||||||| ||| ||||||||||||    
T  32059934 cgcgaaatcaaacgccgcacaagacgacgaacaacacaacg 32059894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 5e-50; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 3 - 325
Target Start/End: Complemental strand, 13007372 - 13007047
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| |  |||||||| |||| |||||||||||||||||||||||| || || || ||||||| |||||| |||||||||| |||||||    
T  13007372 ttaagtcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgactgatgtagatctttcaagaggaact 13007273  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
    | || |||| || |||||||| | |||||||||| ||||||||| ||| ||||||||||||||| | ||||| |||||||| || |||||||||| | ||    
T  13007272 aaacaaacaccgcgacaaaacacaaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaacacaaaagga 13007173  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccat 298  Q
    |||||| |||| |||||||||||||       |||  || ||||||  ||||||||| |||||  |||||||| |||||| ||||||||||||||||||     
T  13007172 aaaacttgatagatgtgaaaaccac-ttatttagattgaaagaaaatgggaaaaaaggtgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 13007074  T
Q  299 cccttctcgacgaatgaaagagaaaga 325  Q
    | || ||||| ||| ||| ||||||||    
T  13007073 ctctcctcgatgaacgaaggagaaaga 13007047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 3 - 325
Target Start/End: Original strand, 9113670 - 9113995
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    |||||||||||||||   ||||||||| |||| |||||||||||||||||||||||| || || || ||||||| |||||| |||||||||| |||||||    
T  9113670 ttaagtcaccgaaatatctatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgactgatgtagatctttcaagaggaact 9113769  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
      || |||| || ||||||||| ||||||||||| ||||||||| ||| ||||||| ||||||| | ||||| |||||||| || |||||||||| | ||    
T  9113770 gaacaaacaccgcgacaaaacgtgaaatcaaacgccgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcacaaaaaacacaaaagga 9113869  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttagg-tcaaaaatgacctaaaaccat 298  Q
    |||||| |||| |||||||||||||       |||   | ||||||  |||||||||||||||  |||||||| |||| | ||||||||||||||| ||     
T  9113870 aaaacttgatagatgtgaaaaccac-ttatttagattaaaagaaaatgggaaaaaagatgtagaggggtgattctaggttaaaaaatgacctaaaatcac 9113968  T
Q  299 cccttctcgacgaatgaaagagaaaga 325  Q
    |||| ||||| ||| ||||||||||||    
T  9113969 ccctcctcgatgaacgaaagagaaaga 9113995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 4 - 325
Target Start/End: Complemental strand, 38597939 - 38597616
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||| ||||| |  |||||||| |||| |||||||||||||||||||||||| || || || ||||||| |||||| ||||||||||||||||||     
T  38597939 taagtcactgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgactgatgtagatctttcaataggaactg 38597840  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa-cacaataagaa 201  Q
     || |||| |  ||||| ||||||||||||||| ||||||||| ||| ||||||||||||||| | ||||| |||||||| ||||||| ||||| | |||    
T  38597839 aacaaacaccacgacaagacgcgaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaagcacaaaaggaa 38597740  T
Q  202 aaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccatc 299  Q
    ||||| |||| ||||||||| |||       | |  || |||| || |||||||||||||||  |||||||| |||||| |||||| ||||||||||| |    
T  38597739 aaacttgatagatgtgaaaatcacttatttaa-attgaaagaatag-ggaaaaaagatgtagaggggtgattctaggtcaaaaaataacctaaaaccacc 38597642  T
Q  300 ccttctcgacgaatgaaagagaaaga 325  Q
    ||| ||||| ||| ||| ||||||||    
T  38597641 cctcctcgatgaacgaaggagaaaga 38597616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 50 - 325
Target Start/End: Complemental strand, 26825526 - 26825247
Alignment:
Q  50 caaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatga 148  Q
    |||||||||| || || || ||||||| |||||| |||||||||| |||||||  || ||||| | ||||||||||||||||||||| ||||||||| ||    
T  26825526 caaatcattggttgaatttgtaattgactgatgtagatctttcaagaggaactgaacaaacaccgcgacaaaacgcgaaatcaaacgccgcacaagaaga 26825427  T
Q  149 ctaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaaga 248  Q
    | ||||||||||||||| | ||||| |||||||| |||||||||||| | |||||||| |||| | |||||||||||       |||  || |||||||     
T  26825426 cgaacaacacaacgccgcacttagaagacgaaatcacaaaaacacaaaaggaaaaacttgatagacgtgaaaaccac-ttatttagattgaaagaaaagg 26825328  T
Q  249 ggaaaaaagatgtagcg-ggtgattttaggtc---aaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    ||||||||||||||| | ||||||| ||||||   ||||| |||||||||||| |||| ||||| ||| ||| ||||||||    
T  26825327 ggaaaaaagatgtagagtggtgattctaggtccaaaaaaaagacctaaaaccacccctcctcgatgaaagaaggagaaaga 26825247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 11976881 - 11977106
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||||||||||||||| || || || ||||||| ||||| |||||| ||||||| || ||    
T  11976881 taagtcaccgaaattcacatgcttccagatcttcaacgttcacgtccaaatcattggttgaatttgtaattgactgatgccgatctctcaatagaaaata 11976980  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaat---aacaaaaacacaataag 199  Q
     || |||| || ||||| |||||||||||||||||| |||||| ||| ||||| ||||||||  | ||||| ||||||||   || |||||||||| |      
T  11976981 aacaaacaccgcgacaagacgcgaaatcaaacgtcgtacaagacgacgaacaatacaacgccacacttagacgacgaaatcacaaaaaaaacacaaaaga 11977080  T
Q  200 aaaaactcgatatatgtgaaaaccac 225  Q
    ||||||| ||||||||||||||||||    
T  11977081 aaaaacttgatatatgtgaaaaccac 11977106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 6217043 - 6216818
Alignment:
Q  1 atttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaa 100  Q
    ||||||||||||||||| |  ||||||||  ||| |||||||||||| |||||||||||||| || || ||||||| |||||| ||||||||||||| ||    
T  6217043 atttaagtcaccgaaatacacatgcttccgaatctgcaacgttgacgcccaaatcattgattgaatttgtaattgattgatgtagatctttcaatagaaa 6216944  T
Q  101 ctatacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataa 198  Q
    ||| || ||||| | ||||| | |  |||||||| | ||||||||| ||| ||||||| ||||||| | ||||| |||||||| || |||||||||| |     
T  6216943 ctaaacaaacactgcgacaagatg-taaatcaaatgccgcacaagacgacgaacaacataacgccgcatttagacgacgaaatcacaaaaaacacaaaag 6216845  T
Q  199 gaaaaactcgatatatgtgaaaaccac 225  Q
    |||||||| ||||||||||||||||||    
T  6216844 gaaaaacttgatatatgtgaaaaccac 6216818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 22 - 221
Target Start/End: Original strand, 24229748 - 24229950
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaa 120  Q
    ||||| || |||| ||||| |||||||||||||||||| || || || ||||||| |||||| ||||||||||||||||||| || ||||| | |||||     
T  24229748 atgctaccggatctgcaacattgacgtccaaatcattgcttgaatttgtaattgattgatgtagatctttcaataggaactaaacaaacaccgcgacaag 24229847  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacaca-ataagaaa-aactcgatatatgtga 218  Q
    ||||||||||||||||| ||||||| ||| ||||||| ||||||| | |||||||||||||| ||||||| ||| | |||||| |||| |||| ||||||    
T  24229848 acgcgaaatcaaacgtcacacaagacgacgaacaacaaaacgccgcacttagatgacgaaatcacaaaaaaacacaaaagaaacaacttgatagatgtga 24229947  T
Q  219 aaa 221  Q
    |||    
T  24229948 aaa 24229950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 325
Target Start/End: Original strand, 6012083 - 6012408
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||| ||||| |  |||||||| ||||  |||| |||||||||||||||||| || || || ||||||| |||||| ||||||| ||||||||||    
T  6012083 ttaagtcactgaaatacccatgcttccggatctacaacattgacgtccaaatcattggttgaatttgtaattgactgatgtagatcttttaataggaact 6012182  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
      || |||| || ||||||||||||||||||||| ||||||||| ||| ||||||||||| ||| | ||||| || ||||| || |||||||||| | ||    
T  6012183 gaacaaacaccgcgacaaaacgcgaaatcaaacgccgcacaagacgacgaacaacacaacaccgcacttagacgatgaaatcacaaaaaacacaaaagga 6012282  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccat 298  Q
    |||||| |||| | ||||||| |||       |||  || ||||||| | |||||||||||||  |||||||| || ||| ||||||||||||||||||     
T  6012283 aaaacttgatagacgtgaaaaacac-ttatttagattgaaagaaaagggaaaaaaagatgtagaggggtgattctatgtcaaaaaatgacctaaaaccac 6012381  T
Q  299 cccttctcgacgaatgaaagagaaaga 325  Q
    |||| ||| | ||| ||| ||||||||    
T  6012382 ccctcctcaatgaacgaaggagaaaga 6012408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 14726407 - 14726631
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||| ||||||  |||||||| ||||  ||||||||||  ||||||||||| || || || | ||||| ||||| ||||||||||||| ||| ||    
T  14726407 taagtcaccaaaattcacatgcttccggatcttcaacgttgacacccaaatcattggttgaatttgtgattgactgatgccgatctttcaataagaaata 14726506  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacaca-ataag-a 200  Q
     || ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||| ||| | ||||| |||||||| ||||||| ||| ||||| |    
T  14726507 aactaacaccgtgacaagacgcgaaatcaaacatcgcacaagacgacgaacaacacaacaccgcacttagacgacgaaatcacaaaaaaacacataagaa 14726606  T
Q  201 aaaactcgatatatgtgaaaaccac 225  Q
    |||||| ||||||| ||||||||||    
T  14726607 aaaacttgatatatatgaaaaccac 14726631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 36 - 222
Target Start/End: Complemental strand, 41630612 - 41630424
Alignment:
Q  36 gcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaaacgcgaaatcaaac 134  Q
    |||||||||||| |||||||||||||| || || ||||||| ||| |||||||||| ||||||||||| ||||||| |||||||| ||||||| ||||||    
T  41630612 gcaacgttgacgcccaaatcattgattgaatttgtaattgactgaagtcgatcttttaataggaactaaacgaacaccgtgacaagacgcgaagtcaaac 41630513  T
Q  135 gtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaac-acaataagaaaaactcgatatatgtgaaaac 222  Q
    |||| |||||||||| ||||||| ||| ||| | |||||   |||||| |||||||| |||| ||||||||||  ||| ||||||||||    
T  41630512 gtcgtacaagatgacaaacaacaaaacaccgcacttagacatcgaaatcacaaaaactacaaaaagaaaaactttatagatgtgaaaac 41630424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 4 - 190
Target Start/End: Complemental strand, 35850941 - 35850754
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||||||||||  |||||||  ||||  |||||||||||  |||||||||| || || || ||||||| ||||| ||||||||||||||||| ||    
T  35850941 taagtcaccgaaattcacatgcttctggatcttcaacgttgacgcacaaatcattggttgaatttgtaattgactgatgccgatctttcaataggaaata 35850842  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
     || ||||| | || |||||||||||||||||| ||||||||| ||| |||||||||||| |||| ||||| |||||||| |||||||    
T  35850841 aacaaacaccgcgataaaacgcgaaatcaaacgccgcacaagacgacgaacaacacaacgtcgtacttagacgacgaaatcacaaaaa 35850754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 8 - 225
Target Start/End: Complemental strand, 38007496 - 38007275
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    ||||||||||||  |||||||| ||||  ||||||||||||||||||||||| || || || ||||||| ||||| ||||||||||||||||| || ||     
T  38007496 tcaccgaaattcacatgcttccggatcttcaacgttgacgtccaaatcattggttaaatttgtaattgactgatgccgatctttcaataggaaataaaca 38007397  T
Q  108 aaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataa---gaaaa 203  Q
    |||| || |||||||| |||||||||||| ||||||||| ||  |||| ||||| | |||| ||||| |||||||| ||||||| |||| ||    ||||    
T  38007396 aacaccgcgacaaaacacgaaatcaaacgccgcacaagacgatgaacagcacaatgtcgtacttagacgacgaaatcacaaaaaaacaaaaaaacaaaaa 38007297  T
Q  204 actcgatatatgtgaaaaccac 225  Q
    ||| ||||| ||||||||||||    
T  38007296 acttgatatgtgtgaaaaccac 38007275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 70 - 295
Target Start/End: Complemental strand, 11867744 - 11867529
Alignment:
Q  70 taattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaa 168  Q
    ||||||| |||||||||||||| ||||||||||| |||||||  | ||||| ||||||||||||||| || |||||| ||||||||||||||| | | ||    
T  11867744 taattgactgatgtcgatcttttaataggaactaaacgaacaatgcgacaagacgcgaaatcaaacgccgtacaagacgactaacaacacaacactgcaa 11867645  T
Q  169 ttagatgacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtagcg-gg 267  Q
    ||||| |||||||| |||||||||||| | |||||| | ||||||| ||||| |            |  || |||||||| |||||||||||||| | ||    
T  11867644 ttagacgacgaaatcacaaaaacacaaaaggaaaaatttgatatatttgaaacc------------attgaaagaaaagatgaaaaaagatgtagagtgg 11867557  T
Q  268 tgattttaggtcaaaaatgacctaaaac 295  Q
    ||||||||||||||||||||||||||||    
T  11867556 tgattttaggtcaaaaatgacctaaaac 11867529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 145
Target Start/End: Complemental strand, 34945536 - 34945393
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    ||||||||||||||| |  |||||||| |||| |||||||||||||||||||||||| || || || ||||||| |||||| ||||||||||||||||||    
T  34945536 ttaagtcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgactgatgtagatctttcaataggaact 34945437  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaaga 145  Q
      || |||| || ||||||||||||||||||| | |||||||||    
T  34945436 gaacaaacaccgcgacaaaacgcgaaatcaaatgccgcacaaga 34945393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 225
Target Start/End: Complemental strand, 25980282 - 25980077
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaa 120  Q
    ||||||||  ||| ||||| |||||| ||||||||||| || || || || |||| |||||| ||||||||||||||||||| || |||| || |||||     
T  25980282 atgcttccgaatctgcaactttgacgcccaaatcattggttgaatttgtagttgactgatgttgatctttcaataggaactaaacaaacaccgcgacaag 25980183  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa-cacaataagaaaaactcgatatatgtgaa 219  Q
    ||||||||| ||||| ||||||||| ||| ||||||||||  ||| | ||||| |||||||  ||||||| ||||| | ||||||||||||| |||| ||    
T  25980182 acgcgaaattaaacgccgcacaagacgacgaacaacacaataccgcacttagacgacgaaaccacaaaaaccacaaaaggaaaaactcgatagatgttaa 25980083  T
Q  220 aaccac 225  Q
    ||||||    
T  25980082 aaccac 25980077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 22 - 325
Target Start/End: Complemental strand, 7036343 - 7036046
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaa 120  Q
    |||||| | |||| |||||||||||| ||||||||| |||| || || ||||||| | |||||||||||| || | |||||| ||||||| | ||||||     
T  7036343 atgctttcggatctgcaacgttgacgcccaaatcatagattcaatttgtaattgacttatgtcgatcttttaacatgaactaaacgaacaccatgacaag 7036244  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaa 220  Q
    ||||||||||||||| ||||||||| ||| |  ||||| |||||| ||| ||| ||||||||        ||||| |  ||||| | |||||||||||||    
T  7036243 acgcgaaatcaaacgccgcacaagacgaccactaacaccacgccgcaatcagacgacgaaat--------cacaaaagaaaaaaattgatatatgtgaaa 7036152  T
Q  221 accacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccatcccttctcgacgaatgaaag 318  Q
    |||||       |||  || |||||||||||||||||||||||  | ||||||||||||| |||||||||||||||||| |||  || || ||||||| |    
T  7036151 accac-ttatttagattgaaagaaaagaggaaaaaagatgtagatgagtgattttaggtcaaaaaatgacctaaaaccaccccaccttgatgaatgaagg 7036053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 38 - 225
Target Start/End: Original strand, 11073880 - 11074069
Alignment:
Q  38 aacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaaacgcgaaatcaaacgt 136  Q
    |||||||||||||||||||||| || || || ||||||| |||||| ||| ||||||||||||||  || |||| || ||||| |||||||||||||||     
T  11073880 aacgttgacgtccaaatcattgcttgaatttgtaattgattgatgtagatatttcaataggaactgaacaaacaccgcgacaagacgcgaaatcaaacgc 11073979  T
Q  137 cgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaactcgatatatgtgaaaaccac 225  Q
    ||||||||| ||| ||||| ||||||| | | |||||  ||||||| || ||||| |||| | |||||||| |||| |||||||| ||||    
T  11073980 cgcacaagacgacgaacaaaacaacgctgcacttagacaacgaaatcacaaaaaatacaaaaggaaaaacttgatagatgtgaaagccac 11074069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 325
Target Start/End: Original strand, 31391699 - 31392027
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| || || ||||  |||| |||||||||||| ||||||||||| || || || ||||||| ||||| |||||||||||||  |||||    
T  31391699 taagtcaccgaaatactcatccttctggatctgcaacgttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaataaaaacta 31391798  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacaca---ataa- 198  Q
     || ||||| | ||||| | ||||||||||| | ||||||||| ||  |||||||||||| || | ||||| |||||||| ||||||| | |   ||||     
T  31391799 aacaaacactgcgacaagatgcgaaatcaaatgccgcacaagacgaagaacaacacaacgtcgcacttagacgacgaaatcacaaaaaaaaatacataag 31391898  T
Q  199 gaaaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagagga-aaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaac 295  Q
    |||||||| |||| |||||||||||||       |||  ||  |||||| ||| ||||||||||||  |||||||| |||||| ||||||||||||||||    
T  31391899 gaaaaacttgataaatgtgaaaaccac-ttatttagattgatcgaaaaggggagaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaac 31391997  T
Q  296 catcccttctcgacgaatgaaagagaaaga 325  Q
    || |||| ||||| ||| ||  ||||||||    
T  31391998 cacccctcctcgatgaacgatggagaaaga 31392027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 36 - 297
Target Start/End: Original strand, 8096475 - 8096738
Alignment:
Q  36 gcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaaacgcgaaatcaaac 134  Q
    |||| |||||||  |||||||||| || || || ||||||| ||||| | |||||||||||||||||| ||||||| || ||||| |||||||||||||     
T  8096475 gcaatgttgacgctcaaatcattggttgaaattgtaattgattgatgccaatctttcaataggaactaaacgaacaccgcgacaagacgcgaaatcaaat 8096574  T
Q  135 gtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaat--aacaaaaacacaataagaaaaactcgatatatgtgaaaaccacnnnnnnn 232  Q
    | ||| ||| |  || ||||||||||||||| | ||||| || |||||   |||||||||||| |  ||||||| ||||||||||||||||||           
T  8096575 gccgctcaaaacaacgaacaacacaacgccgcacttagacgatgaaatcacacaaaaacacaaaagaaaaaacttgatatatgtgaaaaccac-ttattt 8096673  T
Q  233 agaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtcaaaaatgacctaaaacca 297  Q
    |||  || ||||||| ||||||||||  |||  |||||||| ||||||||||||||||||||||||    
T  8096674 agattgaaagaaaag-ggaaaaaagaaatagaggggtgattctaggtcaaaaatgacctaaaacca 8096738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 13422075 - 13421917
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  |||||||   ||| ||||| |||||| |||||||||||||| || || ||||||| ||||||||||||||||||||||||||    
T  13422075 taagtcaccgaaatacacatgcttcagaatctgcaacattgacgcccaaatcattgattgaatttgtaattgactgatgtcgatctttcaataggaacta 13421976  T
Q  104 tacgaacac-gtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaac 161  Q
     | ||||||   ||||| |||||||||||||   ||||||||| ||| |||||||||||    
T  13421975 aatgaacacaacgacaatacgcgaaatcaaataccgcacaagacgacgaacaacacaac 13421917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 15571631 - 15571405
Alignment:
Q  1 atttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaa 100  Q
    ||||||||||| ||| | || |||||||| |||| |||||||||||  |||||||||||||| || || || || | | | |||||||||||||||| ||    
T  15571631 atttaagtcactgaactactcatgcttccggatctgcaacgttgacacccaaatcattgattgaatttgtagtttactaaagtcgatctttcaatagtaa 15571532  T
Q  101 ctatacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa-cacaataa 198  Q
    ||| ||||||| |  |||||  |  ||||||||||||  ||||||||| | || |||||||||||  | ||||| |||||||| |||||||  |||| |     
T  15571531 ctaaacgaacatctcgacaagccatgaaatcaaacgtaacacaagatggcaaaaaacacaacgccacacttagacgacgaaatcacaaaaattacaaaag 15571432  T
Q  199 gaaaaactcgatatatgtgaaaaccac 225  Q
    |||||||| ||||||||||||||||||    
T  15571431 gaaaaacttgatatatgtgaaaaccac 15571405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 165
Target Start/End: Complemental strand, 7930301 - 7930157
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaa 120  Q
    |||||||| |||| ||||| ||||||  |||||||||| || || || ||||||| ||| ||||||||||| |||||||||| || ||||| | ||| |     
T  7930301 atgcttccggatctgcaacattgacgctcaaatcattggttgaatttgtaattgactgacgtcgatctttccataggaactaaacaaacactgcgaccag 7930202  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccg 165  Q
    | ||||||||||||| ||||||||| ||| |||||||||||||||    
T  7930201 atgcgaaatcaaacgacgcacaagacgacgaacaacacaacgccg 7930157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 4 - 154
Target Start/End: Complemental strand, 10722903 - 10722752
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  ||||||   ||||  ||||||||||| |||||||||||||| || |||||| ||| ||| ||||||||||||||||||||||    
T  10722903 taagtcaccgaaatacccatgcttttggatctacaacgttgacgcccaaatcattgattgaatttttaaatgactgaagtcgatctttcaataggaacta 10722804  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaaca 154  Q
     ||||||| || || || || | |||||||||| ||||||||| ||| ||||    
T  10722803 aacgaacaccgagataagacacaaaatcaaacgccgcacaagacgacaaaca 10722752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 325
Target Start/End: Complemental strand, 34945391 - 34945240
Alignment:
Q  175 gacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtagc-gggtgattt 273  Q
    |||||||| |||||||||||| | |||||||| |||| |||||||||||||       |||  || ||||||| |||||||||||||||  ||||||||     
T  34945391 gacgaaatcacaaaaacacaaaaggaaaaacttgatagatgtgaaaaccacttattt-agattgaaagaaaaggggaaaaaagatgtagaagggtgattc 34945293  T
Q  274 taggtcaaaaa-tgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    ||||||||||| |||||||||||||||| |  |||| ||| ||| ||||||||    
T  34945292 taggtcaaaaaatgacctaaaaccatccttcttcgatgaacgaaggagaaaga 34945240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 26878054 - 26878186
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||| |||| |  |||||||  |||| |||| ||||||| |||||||||||||| ||  | ||||||| ||||||||||||||||| || || ||    
T  26878054 taagtcaccaaaatacccatgcttctggatctgcaatgttgacgcccaaatcattgattgaatatctaattgactgatgtcgatctttcaagagaaatta 26878153  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacg 135  Q
     ||||||| || ||||| || ||||||||||||    
T  26878154 aacgaacaccgcgacaagacacgaaatcaaacg 26878186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 225
Target Start/End: Original strand, 14082440 - 14082539
Alignment:
Q  124 cgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaaacc 223  Q
    |||||||||||| || |||||| ||| ||||||||||||||  | ||||| || ||||| ||||||  |  |||||||||||| ||||||||||||| ||    
T  14082440 cgaaatcaaacgccgtacaagacgacgaacaacacaacgccacacttagacgatgaaatcacaaaa--aatataagaaaaacttgatatatgtgaaagcc 14082537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 325
Target Start/End: Original strand, 26878263 - 26878348
Alignment:
Q  241 agaaaagaggaaaaaagatgtagcg-ggtgattttaggtcaaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    ||||||| || |||||||||||| | ||||||| ||| ||||||||||| |||||||| | || ||||| ||||||| ||||||||    
T  26878263 agaaaagggggaaaaagatgtagagaggtgattctagatcaaaaatgacataaaaccacctctcctcgatgaatgaaggagaaaga 26878348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 41630397 - 41630352
Alignment:
Q  252 aaaaagatgtagcgggtgattttaggtcaaaaatgacctaaaacca 297  Q
    |||||||||||| | |||||| ||||||||||||||||||||||||    
T  41630397 aaaaagatgtagagagtgattctaggtcaaaaatgacctaaaacca 41630352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 1409593 - 1409533
Alignment:
Q  51 aaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca 111  Q
    |||||||||||| || || ||||||| |||||||||||||| |||| |||||| |||||||    
T  1409593 aaatcattgattgaatttgtaattgattgatgtcgatcttttaatatgaactaaacgaaca 1409533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 2979499 - 2979582
Alignment:
Q  244 aaagaggaaaaaagatgtag-cgggtgattttaggtcaaaaa-tgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    ||||||||||||||||| ||  |||||||| ||||||||||| |||||||||| || |||| ||||| || |||||||| ||||    
T  2979499 aaagaggaaaaaagatgcagaggggtgattataggtcaaaaattgacctaaaatcacccctcctcgatgagtgaaagaggaaga 2979582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 14211351 - 14211311
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatt 62  Q
    |||||||  |||| |||||||||||||||||||||||||||    
T  14211351 atgcttctggatctgcaacgttgacgtccaaatcattgatt 14211311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 14664267 - 14664219
Alignment:
Q  249 ggaaaaaagatgtagcgggtgattttaggtcaaaaatgacctaaaacca 297  Q
    |||||||||||| ||  ||||||| ||| ||||||||||||||||||||    
T  14664267 ggaaaaaagatgcagatggtgattctagatcaaaaatgacctaaaacca 14664219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 35850688 - 35850620
Alignment:
Q  241 agaaaagaggaaaaaagatgtagc-gggtgattttaggtcaaaaatgacctaaaaccatcccttctcga 308  Q
    ||||||| | |||||| ||||||  |||||||| ||||||||||| |||||||||||| |||| |||||    
T  35850688 agaaaagggaaaaaaatatgtagatgggtgattctaggtcaaaaaagacctaaaaccacccctcctcga 35850620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 35920960 - 35921000
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatt 62  Q
    |||||||| |||| ||||||||||||| |||||||||||||    
T  35920960 atgcttccggatctgcaacgttgacgttcaaatcattgatt 35921000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 32693 - 32917
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| || ||||||||||||| |||||||||||||||||||||||| || || || ||||||| |||||| ||||||||||||||||||     
T  32693 taagtcaccgaaatactcatgcttccagatctgcaacgttgacgtccaaatcattgcttgaatttgtaattgattgatgtagatctttcaataggaactg 32792  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac--aaaaacacaataaga 200  Q
     || || | || ||||| ||||||||||||||| ||||||||| ||| ||||||| ||||||| | ||||| |||||||| ||  |||||||||| | ||    
T  32793 aacaaataccgcgacaagacgcgaaatcaaacgccgcacaagacgacgaacaacaaaacgccgcacttagacgacgaaatcacaaaaaaacacaaaagga 32892  T
Q  201 aaaactcgatatatgtgaaaaccac 225  Q
    |||||| |||| |||||||||||||    
T  32893 aaaacttgatagatgtgaaaaccac 32917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 8 - 225
Target Start/End: Complemental strand, 8651 - 8432
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    |||||||||| |  || |||||||||| |||||||||||| ||||||||||| || || || |||  || |||||||||||||||||||||||||| |||    
T  8651 tcaccgaaatacccattcttccagatctgcaacgttgacgcccaaatcattggttgaatttgtaagagactgatgtcgatctttcaataggaactaaacg 8552  T
Q  108 aaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa-cacaataagaaaaac 205  Q
    |||| || ||||| |||||||||||||||  |||||||| ||  ||||| ||||||||| | |||||||||||||| ||||||| ||||| |  ||||||    
T  8551 aacatcgcgacaagacgcgaaatcaaacgctgcacaagacgatgaacaatacaacgccgcacttagatgacgaaatcacaaaaatcacaaaagcaaaaac 8452  T
Q  206 tcgatatatgtgaaaaccac 225  Q
    | ||||||||| ||||||||    
T  8451 tggatatatgtaaaaaccac 8432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 8 - 325
Target Start/End: Complemental strand, 1483 - 1163
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    ||||||||||||  ||||||| ||| | |||||||||||| |||||| |||| |  || || ||||||| ||||| |||||||||||||||||||| |||    
T  1483 tcaccgaaattcacatgcttctagaactgcaacgttgacgcccaaattattggtcgaatttgtaattgactgatgccgatctttcaataggaactaaacg 1384  T
Q  108 aaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacaca-ataaga-aaaa 204  Q
    |||| ||  |||| ||||||||||||||| | ||||||| ||| ||||||||||||||| | ||||| || ||||| ||||||| ||| | |||| ||||    
T  1383 aacaccgcaacaagacgcgaaatcaaacgccacacaagacgacgaacaacacaacgccgcacttagacgaagaaatcacaaaaaaacacaaaagagaaaa 1284  T
Q  205 ctcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccatccct 302  Q
    || ||||||||||||||||||       |||  || ||||||| |||||||||| ||||  |||||||| |||||| |||||||||||||||||| | ||    
T  1283 cttgatatatgtgaaaaccac-ttatttagagtgaaagaaaag-ggaaaaaagaagtagaggggtgattctaggtcaaaaaatgacctaaaaccacctct 1186  T
Q  303 tctcgacgaatgaaagagaaaga 325  Q
     ||||| ||| ||| ||||||||    
T  1185 cctcgatgaacgaaggagaaaga 1163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 4 - 325
Target Start/End: Complemental strand, 15635 - 15311
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||||||||||    |||||||| |||| |||| ||||||||||||||||||| || || || ||||||| |||||| |||||||||||||||| |     
T  15635 taagtcaccgaaatatccatgcttccggatctgcaatgttgacgtccaaatcattggttgaatttgtaattgactgatgtagatctttcaataggaaatg 15536  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatc-aaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
     || |||| || ||||| |||||||||| ||||| ||||||||| ||| ||||||||||| ||| | |||||||||||||| || |||||||||| | ||    
T  15535 aacaaacaccgcgacaagacgcgaaatcaaaacgccgcacaagacgacgaacaacacaacaccgcacttagatgacgaaatcacaaaaaacacaaaagga 15436  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccat 298  Q
    |||||| || | || ||||||||||       |||  || ||||||| || ||||||||||||  |||||||| |||||| ||||||||||||||||||     
T  15435 aaaacttgaaagatatgaaaaccac-ttatttagattgaaagaaaag-gggaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 15338  T
Q  299 cccttctcgacgaatgaaagagaaaga 325  Q
    |||| ||||| ||| ||| ||||||||    
T  15337 ccctcctcgaagaacgaaggagaaaga 15311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 31 - 225
Target Start/End: Original strand, 10015 - 10210
Alignment:
Q  31 gatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaaacgcgaaat 129  Q
    |||| |||||||||||   |||||||||| || || || |||||||  |||||||||||||||||||||| || | |||||| | ||||| |||||||||    
T  10015 gatctgcaacgttgactctcaaatcattggttgaatttgtaattgatcgatgtcgatctttcaataggaattaaatgaacaccgcgacaagacgcgaaat 10114  T
Q  130 caaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaaaccac 225  Q
    |||||| ||||||||| ||| ||||| |||| |||| | ||||| |||||||| |||||||||||| | |||||||| ||||||||||||||||||    
T  10115 caaacgccgcacaagacgacgaacaaaacaaagccgcacttagacgacgaaatcacaaaaacacaaaaggaaaaacttgatatatgtgaaaaccac 10210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 31 - 225
Target Start/End: Complemental strand, 38169 - 37966
Alignment:
Q  31 gatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaaacgcgaaat 129  Q
    ||||| ||| ||||||  ||||||||| |||| || || ||||||| ||| ||| ||||||||||| |||||| |||||||| || |||| ||  |||||    
T  38169 gatcaacaatgttgacacccaaatcatcgattgaatttgtaattgactgaagtctatctttcaatatgaactaaacgaacactgtaacaagacatgaaat 38070  T
Q  130 caaacgtcgcacaagatgacta--------acaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaactcgatatatgtgaaaa 221  Q
    || ||| ||||||||| | | |        ||||||||| |||| | |||||||||||||||| |||||||||| | |||||||| || |||||||||||    
T  38069 catacgccgcacaagacggcgattcggcaaacaacacaatgccgcacttagatgacgaaataaaaaaaacacaaaaggaaaaacttgacatatgtgaaaa 37970  T
Q  222 ccac 225  Q
    ||||    
T  37969 ccac 37966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 222
Target Start/End: Original strand, 31220 - 31436
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  |||||||| |||| ||||| |||| |  |||||| |||||| || || ||||||| ||||||||||||||||||||||||||    
T  31220 taagtcaccgaaatacccatgcttccggatctgcaacattgatgctcaaatcgttgattgaatttgtaattgagtgatgtcgatctttcaataggaacta 31319  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaa 202  Q
     | ||  | |||||||| ||| ||||||||||||||||||||| ||||||||||| ||||||  ||||||| |  ||||| || ||||||||| | ||||    
T  31320 aatgattaccgtgacaagacgggaaatcaaacgtcgcacaagacgactaacaacataacgccacaattagacg--gaaatcac-aaaacacaaaaggaaa 31416  T
Q  203 aactcgatatatgtgaaaac 222  Q
    |||| |||||||||||||||    
T  31417 aacttgatatatgtgaaaac 31436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 1765 - 2056
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    ||||||| |||||| |  |||||||| |||| |||||||||  | |||||||||||||| || || ||||| |  |||||||||||| |||||| || ||    
T  1765 taagtcatcgaaatacccatgcttccggatctgcaacgttggtgcccaaatcattgattgaatttgtaatttaccgatgtcgatcttccaatagaaatta 1864  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaa 202  Q
     ||||||| || ||||| |||||||| |||||| |||||||||||||||| |||   | |||| | | ||| |||||||| |||||||||||| | ||||    
T  1865 aacgaacaccgcgacaagacgcgaaaccaaacgacgcacaagatgactaataacctgaggccgcattcagacgacgaaatcacaaaaacacaaaaggaaa 1964  T
Q  203 aactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtcaaaaatgacctaaaa 294  Q
    |||| |||||||||| |||||||       | |  || |||||||||||||||||||||||  | |||||||||||| ||||| |||||||||    
T  1965 aacttgatatatgtgcaaaccacttatttaa-attgaaagaaaagaggaaaaaagatgtagatgagtgattttaggtaaaaaaagacctaaaa 2056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 22 - 325
Target Start/End: Original strand, 71828 - 72134
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaa 120  Q
    |||||||| ||||  |||||||||| |||||||||||| || || || ||||||| | |||| ||||||||||||||||||  || |||| || ||||||    
T  71828 atgcttccggatctacaacgttgacatccaaatcattggttgaatttgtaattgactaatgtagatctttcaataggaactgaacaaacaccgcgacaaa 71927  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataagaaaaactcgatatatgtgaa 219  Q
    ||| ||||||||||  |||||||||  || ||||||||||||||| | ||||| |||||||| || ||||||||||   |||||||| |||| |||||||    
T  71928 acgtgaaatcaaactccgcacaagacaacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaacacaaatggaaaaacttgatagatgtgaa 72027  T
Q  220 aaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtag-cgggtgattttaggtc-aaaaatgacctaaaaccatcccttctcgacgaatgaaa 317  Q
    ||||||        ||  || ||||||| || ||||||||| ||   ||||||| |||||| |||||||||||||||||| |||| ||||| ||| |||     
T  72028 aaccacttatttg-gattgaaagaaaagggggaaaaagatgaagaatggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaag 72126  T
Q  318 gagaaaga 325  Q
    ||||||||    
T  72127 gagaaaga 72134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 220
Target Start/End: Original strand, 1923 - 2136
Alignment:
Q  8 tcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacg 107  Q
    |||||||||| |||||| || | |||| |||||||||||| ||||| ||||| || || || ||||||| | |||| ||||||||||||||||||| |      
T  1923 tcaccgaaatacttatgttttcggatctgcaacgttgacgcccaaaccattggttgaatttgtaattgactaatgtagatctttcaataggaactaaaaa 2022  T
Q  108 aaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaaaact 206  Q
    |||| || ||||| | ||||||||||||| | || |||| ||| ||||||| || |||| | ||||| || ||||| |||||||||||| |  |||||||    
T  2023 aacaccgcgacaagatgcgaaatcaaacgccacataagacgacgaacaacaaaatgccgcacttagacgatgaaatcacaaaaacacaaaagaaaaaact 2122  T
Q  207 cgatatatgtgaaa 220  Q
     |||| ||||||||    
T  2123 tgatagatgtgaaa 2136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 325
Target Start/End: Complemental strand, 50920 - 50605
Alignment:
Q  3 ttaagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaact 102  Q
    |||||||||||||||    |||||||| |||| |||||||||||||||||||||||| || || || ||||||| | | || ||||||| || ||||| |    
T  50920 ttaagtcaccgaaatatccatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgactaacgtagatcttttaagaggaaat 50821  T
Q  103 atacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataac-aaaaacacaataaga 200  Q
      || |||| || ||||||||||||||||||||| |          || ||||||||||||||| | ||||| |||||||| || |||||||||| | ||    
T  50820 gaacaaacaccgcgacaaaacgcgaaatcaaacgcc----------acaaacaacacaacgccgcacttagacgacgaaatcacgaaaaacacaaaagga 50731  T
Q  201 aaaactcgatatatgtgaaaaccacnnnnnnnagaacgagagaaaagaggaaaaaagatgtagcggg-tgattttaggtcaaaaa-tgacctaaaaccat 298  Q
    |||||| |||| |||||||||||||       |||  || ||||||| ||||||||||||||| ||| ||||| ||||||||||| |||||||||| ||     
T  50730 aaaacttgatagatgtgaaaaccac-ttatttagattgaaagaaaaggggaaaaaagatgtagagggatgattctaggtcaaaaagtgacctaaaatcac 50632  T
Q  299 cccttctcgacgaatgaaagagaaaga 325  Q
    |||| ||| | ||| ||| ||||||||    
T  50631 ccctcctcaatgaacgaaggagaaaga 50605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 71264 - 71433
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaaca-cgtgacaaa 120  Q
    |||||||| |||| |||||||||||  || ||||||||||| || || ||||||| ||||| |||||||| ||||||||||| ||||||| |  |||||     
T  71264 atgcttccggatctgcaacgttgacaccccaatcattgattgaatttataattgactgatgccgatctttaaataggaactaaacgaacaccacgacaag 71363  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa 190  Q
    ||||||||||||  |  |||||||  |||||||||||||||||||   ||||| |||||||| |||||||    
T  71364 acgcgaaatcaactgctgcacaagtcgactaacaacacaacgccgcccttagacgacgaaattacaaaaa 71433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 306
Target Start/End: Original strand, 71469 - 71533
Alignment:
Q  241 agaaaagaggaaaaaagatgtagcggg-tgattttaggtcaaaaatgacctaaaaccatcccttctc 306  Q
    |||||||||||||| |  ||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  71469 agaaaagaggaaaata--tgtagaggggtgattttaggtcaaaaatgacctaaaaccaccccttctc 71533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 225
Target Start/End: Complemental strand, 36950 - 36750
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacac-gtgacaaa 120  Q
    |||||||||||| |||||| |||||| |||||||||||||| || || ||||| | | ||||| || ||||     |||||| |  ||||| |  | |||    
T  36950 atgcttccagattagcaacattgacgcccaaatcattgattgaatttgtaattaactaatgtcaatatttc-----gaactaaaaaaacaccgaaataaa 36856  T
Q  121 acgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaacacaataagaaa-aactcgatatatgtgaa 219  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||||  ||||||| |||| ||| ||||||| |||| | |||| |||| ||||  ||||||    
T  36855 acgcgaaatcaaacgccgcacaagacgactaccaacacaacgccacaattagacgacggaatcacaaaaatacaaaaggaaagaacttgatacttgtgaa 36756  T
Q  220 aaccac 225  Q
    ||||||    
T  36755 aaccac 36750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 56 - 225
Target Start/End: Complemental strand, 8161 - 7995
Alignment:
Q  56 attgatttaacttttaattgaatgatgtcgatctttcaataggaactatacgaacacgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaa 155  Q
    ||||||| || || || |||| ||||||||||||||||| |||||||| ||||||||    ||  |||| ||||||||||||  |||||| ||  || ||    
T  8161 attgattgaatttgtatttgattgatgtcgatctttcaacaggaactaaacgaacac----cacgacgcaaaatcaaacgtcagacaagacgaagaataa 8066  T
Q  156 cacaacgccgtaattagatgacgaaataacaaa-aacacaataagaaaaactcgatatatgtgaaaaccac 225  Q
    |||||| | | | |||||| ||||||| ||||| ||||||| | |||||||| |||| |||||||||||||    
T  8065 cacaacactgcatttagataacgaaatcacaaataacacaaaaggaaaaacttgatagatgtgaaaaccac 7995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 225
Target Start/End: Complemental strand, 7841 - 7635
Alignment:
Q  22 atgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaa-ctatacgaacacgtga-caa 119  Q
    |||||||| |||  ||||||| |||  |||||| ||||||  || || ||||||| ||| || ||||||||||||| || ||| ||||||||   | |||    
T  7841 atgcttccggatatgcaacgtcgacacccaaataattgatggaatttataattgactgaagtggatctttcaatagaaaacta-acgaacactgcatcaa 7743  T
Q  120 aacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaaa--cacaataagaaaaactcgatatatgtg 217  Q
     ||||||| ||||||| | ||||||| ||| ||||||||||||||| | | ||||||| || | |||||||  ||||| | |||||||| ||||||||||    
T  7742 gacgcgaattcaaacgccacacaagacgacaaacaacacaacgccgcactcagatgacaaattcacaaaaaaacacaaaaggaaaaacttgatatatgtg 7643  T
Q  218 aaaaccac 225  Q
    ||||||||    
T  7642 aaaaccac 7635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 325
Target Start/End: Complemental strand, 7595 - 7536
Alignment:
Q  267 gtgattttaggtcaaaaa-tgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    |||||| ||||||||||| |||||||||||||||||| ||||| |||| || ||||||||    
T  7595 gtgattctaggtcaaaaaatgacctaaaaccatccctcctcgatgaataaaggagaaaga 7536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 65988 - 66174
Alignment:
Q  4 taagtcaccgaaattcttatgcttccagatcagcaacgttgacgtccaaatcattgatttaacttttaattgaatgatgtcgatctttcaataggaacta 103  Q
    |||||||||||||| |  |||||||| |||| ||||||||| |  ||||||||||| || || || ||||||| ||||||||||||| |||| | |||||    
T  65988 taagtcaccgaaatacccatgcttccggatctgcaacgttggcacccaaatcattggttgaatttgtaattgactgatgtcgatcttccaattgtaacta 66087  T
Q  104 tacgaaca-cgtgacaaaacgcgaaatcaaacgtcgcacaagatgactaacaacacaacgccgtaattagatgacgaaataacaaaa 189  Q
     || |||| |  ||||| | || |||||| ||| | ||||||| ||| ||||||| ||||| | | ||||| ||| |||| ||||||    
T  66088 aacaaacaccacgacaagatgcaaaatcagacgccacacaagacgacgaacaacataacgctgcacttagacgacaaaatcacaaaa 66174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 319
Target Start/End: Original strand, 58288 - 58343
Alignment:
Q  265 gggtgattttaggtcaaaa-atgacctaaaaccatcccttctcgacgaatgaaaga 319  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||| |||||||    
T  58288 gggtgattttaggtcaaaaaatgacctaaaaccacccctcctcgacgagtgaaaga 58343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 19246 - 19306
Alignment:
Q  265 gggtgattttaggtcaaaaatgacctaaaaccatcccttctcgacgaatgaaagagaaaga 325  Q
    |||| ||| ||||||||||| ||| |||||||| |||| ||||| || |||||||||||||    
T  19246 gggtaattctaggtcaaaaacgacataaaaccacccctcctcgatgagtgaaagagaaaga 19306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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