View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4023_low_10 (Length: 236)
Name: NF4023_low_10
Description: NF4023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4023_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 16811682 - 16811904
Alignment:
| Q |
1 |
tggtatgagtatctacgttgaaatttatatgatataatattactaatgtttctctggctaattcaattcaacattacccgtaggttaagattgagacatg |
100 |
Q |
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| T |
16811682 |
tggtatgagtatctacgttgaaatttatatgatataatattactaatgtttctctggctaattcaattcaacattgcccgtaggtaaagattgagacatg |
16811781 |
T |
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| Q |
101 |
aatccaatctaaatctaaaaacgcgtttttgaacttaatctaaatctagaaaagaaatctatttgttgatgatgattcaatcatccaatagtgtttatat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16811782 |
aatccaatctaaatctaaaaacgcgtttttgaacttaatctaaatctagaaaagaaatctatttgttgatgatgattcaatcatccaatagtgtttatat |
16811881 |
T |
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| Q |
201 |
aaaatgaaatatatatttttagt |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
16811882 |
aaaatgaaatatatatttttagt |
16811904 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 16850961 - 16851183
Alignment:
| Q |
1 |
tggtatgagtatctacgttgaaatttatatgatataatattactaatgtttctctggctaattcaattcaacattacccgtaggttaagattgagacatg |
100 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |
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| T |
16850961 |
tggtatgagtatctacgttgaaatttatatgatataatattactaatgtttctctggctaattcaattcaacattgcccgtaggtaaagattgagacatg |
16851060 |
T |
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| Q |
101 |
aatccaatctaaatctaaaaacgcgtttttgaacttaatctaaatctagaaaagaaatctatttgttgatgatgattcaatcatccaatagtgtttatat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16851061 |
aatccaatctaaatctaaaaacgcgtttttgaacttaatctaaatctagaaaagaaatctatttgttgatgatgattcaatcatccaatagtgtttatat |
16851160 |
T |
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| Q |
201 |
aaaatgaaatatatatttttagt |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
16851161 |
aaaatgaaatatatatttttagt |
16851183 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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