View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4024_high_11 (Length: 226)
Name: NF4024_high_11
Description: NF4024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4024_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 41467899 - 41468086
Alignment:
| Q |
18 |
catagggcaagaggaannnnnnncctagctaactaacaatgcacgatcaagatgatgataaaagacaaaatgaagctacgtataggcttagtagtaagaa |
117 |
Q |
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| T |
41467899 |
catagggcaagaggaatttttttcctagctaactaacaatgcacgatcaagatgatgataaaagacaaaatgaagctacgtataggcttagtagtaagaa |
41467998 |
T |
|
| Q |
118 |
ctaagaagtagggtcacgaacttgnnnnnnngaacggttttgaataacaatgtcgtacatatgaaagtgcttaaaactactgaagttt |
205 |
Q |
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| T |
41467999 |
ctaagaagtagggtcacgaacttgaaaaaaagaacggttttgaataacaatgtcgtacatatgaaagtgcttaaaactattgaagttt |
41468086 |
T |
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