View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4024_high_8 (Length: 238)
Name: NF4024_high_8
Description: NF4024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4024_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 13 - 221
Target Start/End: Complemental strand, 48957623 - 48957411
Alignment:
| Q |
13 |
gcacagagaaaggttttgatacttccgtgcacatg----gcttgaagctttcgaattgattatcaccacttttctgaatgggttgctttgctaacccact |
108 |
Q |
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| T |
48957623 |
gcacagagaaaggttttgatacttccgtgcacatgcatggcttgaaactttcgaattgattatcaccacttttctgaatgggttgctttgctaacccact |
48957524 |
T |
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| Q |
109 |
tatttagtcaagttatggatatggagaagaactttttctcaggtttaaggcatcaaagtagtaaagtgaaggttgggagttttaagtaacatggattgct |
208 |
Q |
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| T |
48957523 |
tatttagtcaagttatggatatgaagaagaactttttctcaggtttaaggcatcaaagtagtaaagtgaaggctgggagttttaagtaacatggattgct |
48957424 |
T |
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| Q |
209 |
ttgctaacccact |
221 |
Q |
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||||||||||||| |
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| T |
48957423 |
ttgctaacccact |
48957411 |
T |
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