View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4025_high_16 (Length: 236)
Name: NF4025_high_16
Description: NF4025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4025_high_16 |
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Alignment Details
Target: chr1 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 63 - 214
Target Start/End: Original strand, 13315624 - 13315767
Alignment:
| Q |
63 |
gtgtaatttagccaccagtcgtttcaagagaggacccaaagattgggtgcagtatgctgccaattttattttcatcttctgannnnnnngtaaggtatgg |
162 |
Q |
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| T |
13315624 |
gtgtaatttagccacttgtcgtttctagagaggacccaaagattgggtgcagtatgctgccaattttattttcttcttctgattttttt-taa------- |
13315715 |
T |
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| Q |
163 |
cgtgaatggaacattgttgttcttcccttgagtcaaatattcctcaacaaga |
214 |
Q |
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| T |
13315716 |
cgtgaatggaacgttgttgttcttcccttgagtcaaatattcctcaacaaga |
13315767 |
T |
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