View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4025_low_2 (Length: 646)

Name: NF4025_low_2
Description: NF4025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4025_low_2
NF4025_low_2
[»] chr3 (2 HSPs)
chr3 (92-423)||(14552802-14553133)
chr3 (11-93)||(14552650-14552732)
[»] chr5 (43 HSPs)
chr5 (92-423)||(37702113-37702444)
chr5 (92-423)||(37393276-37393607)
chr5 (92-423)||(37593634-37593965)
chr5 (92-423)||(37696025-37696356)
chr5 (92-423)||(37532530-37532861)
chr5 (92-423)||(37710934-37711265)
chr5 (92-423)||(37639176-37639507)
chr5 (92-423)||(37401397-37401728)
chr5 (92-380)||(37823334-37823622)
chr5 (92-422)||(37413565-37413895)
chr5 (92-422)||(37382726-37383056)
chr5 (94-419)||(37435142-37435467)
chr5 (485-630)||(37594282-37594427)
chr5 (485-617)||(37400948-37401080)
chr5 (485-630)||(37702626-37702771)
chr5 (484-617)||(37435664-37435797)
chr5 (485-617)||(37711582-37711714)
chr5 (485-617)||(37392962-37393094)
chr5 (11-93)||(37393677-37393759)
chr5 (485-630)||(37696673-37696824)
chr5 (421-479)||(37393187-37393245)
chr5 (422-479)||(37696523-37696580)
chr5 (420-476)||(37639537-37639593)
chr5 (420-476)||(37823695-37823751)
chr5 (485-617)||(37823847-37823985)
chr5 (426-476)||(37401176-37401226)
chr5 (422-476)||(37594132-37594186)
chr5 (423-476)||(37401311-37401364)
chr5 (423-476)||(37711298-37711351)
chr5 (575-630)||(37533148-37533203)
chr5 (424-479)||(37702478-37702533)
chr5 (431-476)||(37532902-37532947)
chr5 (29-93)||(37428348-37428412)
chr5 (47-93)||(37532414-37532460)
chr5 (47-93)||(37593518-37593564)
chr5 (422-476)||(37639674-37639728)
chr5 (47-93)||(37695909-37695955)
chr5 (422-476)||(37711432-37711486)
chr5 (45-93)||(37435022-37435070)
chr5 (431-479)||(37594006-37594054)
chr5 (431-479)||(37696397-37696445)
chr5 (489-613)||(37639828-37639958)
chr5 (47-93)||(37823218-37823264)
[»] chr4 (9 HSPs)
chr4 (92-380)||(16843438-16843726)
chr4 (100-420)||(24218133-24218453)
chr4 (100-380)||(16846106-16846386)
chr4 (489-617)||(16842946-16843074)
chr4 (431-479)||(16843171-16843219)
chr4 (426-476)||(16843309-16843359)
chr4 (48-93)||(16843796-16843841)
chr4 (431-479)||(16845970-16846018)
chr4 (427-479)||(24218041-24218093)


Alignment Details
Target: chr3 (Bit Score: 328; Significance: 0; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 92 - 423
Target Start/End: Original strand, 14552802 - 14553133
Alignment:
Q  92 tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag 191  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14552802 tcaacttaggaaatgaatgcttgatgctagaacaggtgattgctccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag 14552901  T
Q  192 ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttgaacagtgagccaatgactgtggtagtggtcctttcaattgg 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14552902 ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttgaacagtgagccaatgactgtggtagtggtcctttcaattgg 14553001  T
Q  292 tttccattcaactttatagtctcaaatgcatttccttttgaaaaggttctaggaatgattccatagaggttgttcatttgcatatccaaaatagagagaa 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14553002 tttccattcaactttatagtctcaaatgcatttccttttgaaaaggttctaggaatgattccatagaggttgttcatttgcatatccaaaatagagagaa 14553101  T
Q  392 gaggaaatgtccccaggcattgtggaatcata 423  Q
    ||||||||||||||||||||||||||||||||    
T  14553102 gaggaaatgtccccaggcattgtggaatcata 14553133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 14552650 - 14552732
Alignment:
Q  11 cacagaatcattatagtaattatagtagctggctttacccatgtattgcaaaccaatttggctgtcattcacgttcatcattc 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14552650 cacagaatcattatagtaattatagtagctggctttacccatgtattgcaaaccaatttggctgtcattcacgttcatcattc 14552732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 248; Significance: 1e-137; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 92 - 423
Target Start/End: Original strand, 37702113 - 37702444
Alignment:
Q  92 tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag 191  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||| ||| |||||||||    
T  37702113 tcaacttaggaaatgaatgcttggtgctagaacaagtgattgcaccatgaagatgatttgatcgtaaactcagcacctgtaactctggtaaagtttctag 37702212  T
Q  192 ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttgaacagtgagccaatgactgtggtagtggtcctttcaattgg 291  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||| ||||| |||| |||||||| |||||||    
T  37702213 ccaattgggaaatgtatcctctatgttgttgtcaccaaggtccaatacttcaagatttgaacattgagccaaagactgcggtaatggtccttccaattgg 37702312  T
Q  292 tttccattcaactttatagtctcaaatgcatttccttttgaaaaggttctaggaatgattccatagaggttgttcatttgcatatccaaaatagagagaa 391  Q
    || ||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  37702313 ttgccattcaactttatagtctcaaatgcatttcctttggagaaggttctaggaatgcttccatagaggttgttcatttgcatatccaaaatagagagat 37702412  T
Q  392 gaggaaatgtccccaggcattgtggaatcata 423  Q
    |||||||||| ||||| |||||||||||||||    
T  37702413 gaggaaatgttcccagacattgtggaatcata 37702444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 92 - 423
Target Start/End: Complemental strand, 37393607 - 37393276
Alignment:
Q  92 tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag 191  Q
    ||||||||||||||| ||||||| |||||||||| |||||||  || ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37393607 tcaacttaggaaatggatgcttggtgctagaacatgtgattgacccatgaagatgatttgatcgtaaacttagcacctgtaactcttgtagagtttctag 37393508  T
Q  192 ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttgaacagtgagccaatgactgtggtagtggtcctttcaattgg 291  Q
    |||||||||||| |||||||||||| |||||||||||||||| ||||||||||||| |||||||| ||||||  | ||||||| |||||||| |||||||    
T  37393507 ccaattgggaaaagtatcctctatgttgttgtcaccaaggtccaatacttcaagatatgaacagtaagccaaacattgtggtaatggtccttccaattgg 37393408  T
Q  292 tttccattcaactttatagtctcaaatgcatttccttttgaaaaggttctaggaatgattccatagaggttgttcatttgcatatccaaaatagagagaa 391  Q
    ||||||||||| |||||||||||||||  ||||||||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||     
T  37393407 tttccattcaattttatagtctcaaatatatttcctttggaaaaggttccaggaatgcttccacagaggttgttcatttgcatatccaaaatagagagat 37393308  T
Q  392 gaggaaatgtccccaggcattgtggaatcata 423  Q
     || |||||| || || |||||||||||||||    
T  37393307 aagaaaatgttcctagacattgtggaatcata 37393276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 92 - 423
Target Start/End: Original strand, 37593634 - 37593965
Alignment:
Q  92 tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag 191  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  37593634 tcaacttaggaaatgaatgcttggtgctagaacaagtgattgcaccatgaagattatttgatcgtaagcttagaacttgtaactcttgtagagtttctag 37593733  T
Q  192 ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttgaacagtgagccaatgactgtggtagtggtcctttcaattgg 291  Q
    |||||| |||||||| ||||||||| |||||||||||||||| || |||||||||  ||||||||||| ||| |||||||||| |||||||| |||||||    
T  37593734 ccaatttggaaatgtgtcctctatgttgttgtcaccaaggtccaaaacttcaagaaatgaacagtgagacaaagactgtggtaatggtccttccaattgg 37593833  T
Q  292 tttccattcaactttatagtctcaaatgcatttccttttgaaaaggttctaggaatgattccatagaggttgttcatttgcatatccaaaatagagagaa 391  Q
    |||||||||||||||||||||| |||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| | |   |||     
T  37593834 tttccattcaactttatagtctgaaatgcattttctttggaaaaggttctaggaatgtttccatagaggttgttcatttgcatatccaatacattaagag 37593933  T
Q  392 gaggaaatgtccccaggcattgtggaatcata 423  Q
     ||  ||||| |||||||||||||||||||||    
T  37593934 aagttaatgttcccaggcattgtggaatcata 37593965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 92 - 423
Target Start/End: Original strand, 37696025 - 37696356
Alignment:
Q  92 tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag 191  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  37696025 tcaacttaggaaatgaatgcttggtgctagaacaagtgattgcaccatgaagattatttgatcgtaagcttagaacttgtaactcttgtagagtttctag 37696124  T
Q  192 ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttgaacagtgagccaatgactgtggtagtggtcctttcaattgg 291  Q
    |||||| |||||||| ||||||||| |||||||||||||||| || |||||||||  ||||||||||| ||| |||||||||| |||||||| |||||||    
T  37696125 ccaatttggaaatgtgtcctctatgttgttgtcaccaaggtccaaaacttcaagaaatgaacagtgagacaaagactgtggtaatggtccttccaattgg 37696224  T
Q  292 tttccattcaactttatagtctcaaatgcatttccttttgaaaaggttctaggaatgattccatagaggttgttcatttgcatatccaaaatagagagaa 391  Q
    |||||||||||||||||||||| |||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| | |   |||     
T  37696225 tttccattcaactttatagtctgaaatgcattttctttggaaaaggttctaggaatgtttccatagaggttgttcatttgcatatccaatacattaagag 37696324  T
Q  392 gaggaaatgtccccaggcattgtggaatcata 423  Q
     ||  ||||| |||||||||||||||||||||    
T  37696325 aagttaatgttcccaggcattgtggaatcata 37696356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 92 - 423
Target Start/End: Original strand, 37532530 - 37532861
Alignment:
Q  92 tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag 191  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  37532530 tcaacttaggaaatgaatgcttggtgctagaacaagtgattgcaccatgaagattatttgatcgtaagcttagaacttgtaactcttgtagagtttctag 37532629  T
Q  192 ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttgaacagtgagccaatgactgtggtagtggtcctttcaattgg 291  Q
    |||||| |||||||| ||||||||| |||||||||||||||| || |||||||||  ||||||||||| ||| ||||| |||| |||||||| |||||||    
T  37532630 ccaatttggaaatgtgtcctctatgttgttgtcaccaaggtccaaaacttcaagaaatgaacagtgagacaaagactggggtaatggtccttccaattgg 37532729  T
Q  292 tttccattcaactttatagtctcaaatgcatttccttttgaaaaggttctaggaatgattccatagaggttgttcatttgcatatccaaaatagagagaa 391  Q
    |||||||||||||||||||||| |||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| | |   |||     
T  37532730 tttccattcaactttatagtctgaaatgcattttctttggaaaaggttctaggaatgtttccatagaggttgttcatttgcatatccaatacattaagag 37532829  T
Q  392 gaggaaatgtccccaggcattgtggaatcata 423  Q
     ||  ||||| |||||||||||||||||||||    
T  37532830 aagttaatgttcccaggcattgtggaatcata 37532861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 92 - 423
Target Start/End: Original strand, 37710934 - 37711265
Alignment:
Q  92 tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag 191  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||| |||||||||||||    
T  37710934 tcaacttgggaaatgtatgcttggtgctagaacaggtgattgcaccatgaagattatttgatcgtaaacttatcacctgtaactctggtagagtttctag 37711033  T
Q  192 ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttgaacagtgagccaatgactgtggtagtggtcctttcaattgg 291  Q
    |||||  |||||||||||||| | | |||||||||||||||| || |||||||||| |||||||| |||||| || ||||||| || ||||| |||||||    
T  37711034 ccaatcaggaaatgtatcctcaacgttgttgtcaccaaggtccaaaacttcaagatatgaacagttagccaaagattgtggtaatgatccttccaattgg 37711133  T
Q  292 tttccattcaactttatagtctcaaatgcatttccttttgaaaaggttctaggaatgattccatagaggttgttcatttgcatatccaaaatagagagaa 391  Q
    || ||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||     
T  37711134 ttgccattcaactttatagtctcaaatgcatttcctttggtaaaggttctaggaatgcttccatagaggttgttcatttgcatatccaaaacatagagat 37711233  T
Q  392 gaggaaatgtccccaggcattgtggaatcata 423  Q
     ||||||||| || ||||||||||||||||||    
T  37711234 taggaaatgttcctaggcattgtggaatcata 37711265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 92 - 423
Target Start/End: Original strand, 37639176 - 37639507
Alignment:
Q  92 tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag 191  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||| |||||||||||||    
T  37639176 tcaacttgggaaatgtatgcttggtgctagaacaggtgattgcaccatgaagattatttgatcgtaaacttatcacctgtaactctggtagagtttctag 37639275  T
Q  192 ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttgaacagtgagccaatgactgtggtagtggtcctttcaattgg 291  Q
    |||||  |||||||||||||| | | |||||||||||||||| || |||||||||| |||||||| |||||| || ||||||| |||||||| |||||||    
T  37639276 ccaatcaggaaatgtatcctcaacgttgttgtcaccaaggtccaaaacttcaagatatgaacagttagccaaagattgtggtaatggtccttccaattgg 37639375  T
Q  292 tttccattcaactttatagtctcaaatgcatttccttttgaaaaggttctaggaatgattccatagaggttgttcatttgcatatccaaaatagagagaa 391  Q
    || ||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||| | ||  |||     
T  37639376 ttgccattcaactttatagtctcaaatgcatttcctttggagaaggttctaggaatgcttccatagaggttgttcatttgcatatccaatacagtaagag 37639475  T
Q  392 gaggaaatgtccccaggcattgtggaatcata 423  Q
     ||  ||||| |||||||||||||||||||||    
T  37639476 aagttaatgttcccaggcattgtggaatcata 37639507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 92 - 423
Target Start/End: Complemental strand, 37401728 - 37401397
Alignment:
Q  92 tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag 191  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||| |||||||||||||    
T  37401728 tcaacttgggaaatgtatgcttggtgctagaacaggtgattgcaccatgaagattatttgatcgtaaacttatcacctgtaactctggtagagtttctag 37401629  T
Q  192 ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttgaacagtgagccaatgactgtggtagtggtcctttcaattgg 291  Q
    |||||  |||||||||||||| | | |||||||||||||||| || |||||||||| |||||||| |||||| || ||||||| |||||||| |||||||    
T  37401628 ccaatcaggaaatgtatcctcaacgttgttgtcaccaaggtccaaaacttcaagatatgaacagttagccaaagattgtggtaatggtccttccaattgg 37401529  T
Q  292 tttccattcaactttatagtctcaaatgcatttccttttgaaaaggttctaggaatgattccatagaggttgttcatttgcatatccaaaatagagagaa 391  Q
    || ||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| | |   |||     
T  37401528 ttgccattcaactttatagtctcaaatgcatttcctttggtaaaggttctaggaatgcttccatagaggttgttcatttgcatatccaatacattaagag 37401429  T
Q  392 gaggaaatgtccccaggcattgtggaatcata 423  Q
     ||  ||||| |||||||||||||||||||||    
T  37401428 aagttaatgttcccaggcattgtggaatcata 37401397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 92 - 380
Target Start/End: Original strand, 37823334 - 37823622
Alignment:
Q  92 tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag 191  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||| |||||||||||||    
T  37823334 tcaacttgggaaatgtatgcttggtgctagaacaggtgattgcaccatgaagattatttgatcgtaaacttatcacctgtaactctggtagagtttctag 37823433  T
Q  192 ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttgaacagtgagccaatgactgtggtagtggtcctttcaattgg 291  Q
    |||||  |||||||||||||| | | |||||||||||||||| || |||||||||| |||||||| |||||| || ||||||| |||||||| |||||||    
T  37823434 ccaatcaggaaatgtatcctcaacgttgttgtcaccaaggtccaaaacttcaagatatgaacagttagccaaagattgtggtaatggtccttccaattgg 37823533  T
Q  292 tttccattcaactttatagtctcaaatgcatttccttttgaaaaggttctaggaatgattccatagaggttgttcatttgcatatccaa 380  Q
    || ||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  37823534 ttgccattcaactttatagtctcaaatgcatttcctttggtaaaggttctaggaatgcttccatagaggttgttcatttgcatatccaa 37823622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 92 - 422
Target Start/End: Complemental strand, 37413895 - 37413565
Alignment:
Q  92 tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag 191  Q
    ||||||| ||||||| ||||||  |||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  37413895 tcaacttgggaaatgtatgctttgtgctagaacaggtgattgcaccatgaagattatttgatcgtaaacttagcacctgtaactcttgtagagtttctag 37413796  T
Q  192 ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttgaacagtgagccaatgactgtggtagtggtcctttcaattgg 291  Q
    ||||||||||||||||||||||||  |||||||||||||||| |  ||||||||||||   || | |||||| |||||||||| |||||||| ||||||     
T  37413795 ccaattgggaaatgtatcctctatattgttgtcaccaaggtccagaacttcaagatttatgcactaagccaaagactgtggtaatggtccttccaattga 37413696  T
Q  292 tttccattcaactttatagtctcaaatgcatttccttttgaaaaggttctaggaatgattccatagaggttgttcatttgcatatccaaaatagagagaa 391  Q
    ||||| |||||||||||  ||||||||| ||||||||| |||||||||||||||| | ||||||| | ||||||||||||||||||||| ||||| |||     
T  37413695 tttccgttcaactttatcatctcaaatgtatttcctttggaaaaggttctaggaaagcttccatacaagttgttcatttgcatatccaatatagaaagag 37413596  T
Q  392 gaggaaatgtccccaggcattgtggaatcat 422  Q
     ||||||||| || |||||||||||||||||    
T  37413595 aaggaaatgttcctaggcattgtggaatcat 37413565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 92 - 422
Target Start/End: Complemental strand, 37383056 - 37382726
Alignment:
Q  92 tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag 191  Q
    ||||||| ||||||| ||| ||| ||||||| || |||||||| || ||||| | |||||||| |||||| ||||| ||||| |||||||||||||| ||    
T  37383056 tcaacttgggaaatggatgtttggtgctagagcatgtgattgcgccatgaagtttatttgatcttaaactgagcacctgtaattcttgtagagtttcaag 37382957  T
Q  192 ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttgaacagtgagccaatgactgtggtagtggtcctttcaattgg 291  Q
    |||||||||||| |||||||||| | ||||||| |||||||| || ||||| || |||| |||||||||||| |||||||||| |||||||| |||| ||    
T  37382956 ccaattgggaaaagtatcctctacgttgttgtctccaaggtccaaaacttcgagttttgtacagtgagccaaagactgtggtaatggtccttccaatcgg 37382857  T
Q  292 tttccattcaactttatagtctcaaatgcatttccttttgaaaaggttctaggaatgattccatagaggttgttcatttgcatatccaaaatagagagaa 391  Q
    ||||||||||||||||| |||||||||||||||||||| || |||||||||||||||  |||||||||||||||||||||||||||||| |  || |||     
T  37382856 tttccattcaactttattgtctcaaatgcatttcctttggagaaggttctaggaatgtgtccatagaggttgttcatttgcatatccaataccgaaagag 37382757  T
Q  392 gaggaaatgtccccaggcattgtggaatcat 422  Q
     ||||||||| |||| |||||||||||||||    
T  37382756 aaggaaatgttcccaagcattgtggaatcat 37382726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 94 - 419
Target Start/End: Original strand, 37435142 - 37435467
Alignment:
Q  94 aacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctagcc 193  Q
    ||||||| ||| | ||| ||| || ||||||||||||||| ||| | ||| | |||||||| |||||| || || |||||||||||||||||||||||||    
T  37435142 aacttagaaaaaggatggttggtgttagaacaggtgattgaaccattaagtttatttgatcttaaactgagtacctgtaactcttgtagagtttctagcc 37435241  T
Q  194 aattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttgaacagtgagccaatgactgtggtagtggtcctttcaattggtt 293  Q
    ||||||||||||||||||||||| ||||||  |||||||| || | ||  || | || |||||||||||| || || |||| ||||||||  ||||||||    
T  37435242 aattgggaaatgtatcctctatgttgttgtatccaaggtccaaaattttgagttctgtacagtgagccaaagattgaggtaatggtccttctaattggtt 37435341  T
Q  294 tccattcaactttatagtctcaaatgcatttccttttgaaaaggttctaggaatgattccatagaggttgttcatttgcatatccaaaatagagagaaga 393  Q
     |||||||||||||||||||| || ||||||||| | ||||| ||| |||| ||| ||||||  |||||||||||||||||||||||||  || |||| |    
T  37435342 gccattcaactttatagtctcgaaggcatttcctctggaaaaagttttaggcatgcttccattaaggttgttcatttgcatatccaaaacggaaagaaaa 37435441  T
Q  394 ggaaatgtccccaggcattgtggaat 419  Q
    |||||||| |||||||||| ||||||    
T  37435442 ggaaatgttcccaggcattttggaat 37435467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 485 - 630
Target Start/End: Original strand, 37594282 - 37594427
Alignment:
Q  485 atgagtttaagagcctcttttgaaaccatttaaggatttccccatgaattttgttattggatagatataatcttttcagattttgtgcttggaatttagg 584  Q
    |||||||||||||| |||| |||||||||||  | |||| ||||||||| ||||||||||| |||| ||||||||  |||||| ||| ||||||||||||    
T  37594282 atgagtttaagagcttcttatgaaaccatttgggaattttcccatgaatgttgttattggagagatctaatctttgaagatttcgtgtttggaatttagg 37594381  T
Q  585 aaaactattaatattagcataagataaatctaagttaacaaggttg 630  Q
    ||||||||||||||||| |||||||||| |||||| ||||||||||    
T  37594382 aaaactattaatattagaataagataaaactaagtcaacaaggttg 37594427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 485 - 617
Target Start/End: Complemental strand, 37401080 - 37400948
Alignment:
Q  485 atgagtttaagagcctcttttgaaaccatttaaggatttccccatgaattttgttattggatagatataatcttttcagattttgtgcttggaatttagg 584  Q
    |||||||||||||| |||| |||||||||||  | |||| |||| |||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||||    
T  37401080 atgagtttaagagcttcttatgaaaccatttgggaattttcccacgaatgttgttattggagagatataatcttttcagatttcgtgctgggaatttagg 37400981  T
Q  585 aaaactattaatattagcataagataaatctaa 617  Q
    ||||||||||||||||||| | |||||||||||    
T  37400980 aaaactattaatattagcagaggataaatctaa 37400948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 485 - 630
Target Start/End: Original strand, 37702626 - 37702771
Alignment:
Q  485 atgagtttaagagcctcttttgaaaccatttaaggatttccccatgaattttgttattggatagatataatcttttcagattttgtgcttggaatttagg 584  Q
    |||||||||||||  |||| |||||||||||  | |||| ||||||||| | ||||||||| |||| |||| ||| ||||||||||||||||||||||||    
T  37702626 atgagtttaagagtttcttatgaaaccatttgggaattttcccatgaatgtagttattggagagatctaatgtttgcagattttgtgcttggaatttagg 37702725  T
Q  585 aaaactattaatattagcataagataaatctaagttaacaaggttg 630  Q
    ||||||||||||||||||| | || |||||||||| ||||||||||    
T  37702726 aaaactattaatattagcagacgagaaatctaagtcaacaaggttg 37702771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 484 - 617
Target Start/End: Original strand, 37435664 - 37435797
Alignment:
Q  484 aatgagtttaagagcctcttttgaaaccatttaaggatttccccatgaattttgttattggatagatataatcttttcagattttgtgcttggaatttag 583  Q
    |||| |||||||||| |||| |||||||||||  | |||| ||||||||| ||||||||||| |||| |||| |||  || |||||||| ||||||||||    
T  37435664 aatgtgtttaagagcttcttatgaaaccatttgggaattttcccatgaatgttgttattggagagatctaatgtttgaagtttttgtgcgtggaatttag 37435763  T
Q  584 gaaaactattaatattagcataagataaatctaa 617  Q
    |||||||||||||||||||| |||||||||||||    
T  37435764 gaaaactattaatattagcagaagataaatctaa 37435797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 485 - 617
Target Start/End: Original strand, 37711582 - 37711714
Alignment:
Q  485 atgagtttaagagcctcttttgaaaccatttaaggatttccccatgaattttgttattggatagatataatcttttcagattttgtgcttggaatttagg 584  Q
    |||||||||||||| || | |||||||||||  | |||| ||||||||| ||||| ||||| |||| |||| ||| ||||||| ||||||||||||||||    
T  37711582 atgagtttaagagcttcgtatgaaaccatttgggaattttcccatgaatgttgttgttggagagatctaatgtttgcagatttcgtgcttggaatttagg 37711681  T
Q  585 aaaactattaatattagcataagataaatctaa 617  Q
    ||||||||||||||||||| | |||||||||||    
T  37711682 aaaactattaatattagcagaggataaatctaa 37711714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 485 - 617
Target Start/End: Complemental strand, 37393094 - 37392962
Alignment:
Q  485 atgagtttaagagcctcttttgaaaccatttaaggatttccccatgaattttgttattggatagatataatcttttcagattttgtgcttggaatttagg 584  Q
    |||||||||||||| |||| |||||||||||  | |||  | ||||||| ||| ||||||| |||| ||| |||| ||||||| ||||||||||||||||    
T  37393094 atgagtttaagagcttcttatgaaaccatttgggaattctcgcatgaatgttgctattggagagatctaagctttccagatttcgtgcttggaatttagg 37392995  T
Q  585 aaaactattaatattagcataagataaatctaa 617  Q
    ||||||||||||||| ||||| |||||||||||    
T  37392994 aaaactattaatattggcatatgataaatctaa 37392962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 37393759 - 37393677
Alignment:
Q  11 cacagaatcattatagtaattatagtagctggctttacccatgtattgcaaaccaatttggctgtcattcacgttcatcattc 93  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||| | ||||||||    
T  37393759 cacagaatcattatagtaattaaagtatctggctttacccatgtattgcaaaccaatttggctgttattcacatccatcattc 37393677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 485 - 630
Target Start/End: Original strand, 37696673 - 37696824
Alignment:
Q  485 atgagtttaagagcctcttttgaaaccatttaaggatttccccatgaattttgttattggatagatataatcttttcagattttgt------gcttggaa 578  Q
    |||||||||||||| |||| |||||||||||  | |||| ||||||||| ||||| ||||| |||| |||   || ||||||| ||      ||| ||||    
T  37696673 atgagtttaagagcttcttatgaaaccatttgggaattttcccatgaatgttgttgttggagagatctaacgattgcagatttggtagttgcgctaggaa 37696772  T
Q  579 tttaggaaaactattaatattagcataagataaatctaagttaacaaggttg 630  Q
    |||||||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  37696773 tttaggaaaactattaatattagcattagataattctaagtcaacaaggttg 37696824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 421 - 479
Target Start/End: Complemental strand, 37393245 - 37393187
Alignment:
Q  421 atataaagggaacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgttgtt 479  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  37393245 atataaagggaactagcattgcagaatgttgaagaaatatctcctgtgaagttgttgtt 37393187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 422 - 479
Target Start/End: Original strand, 37696523 - 37696580
Alignment:
Q  422 tataaagggaacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgttgtt 479  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  37696523 tataaagggaacttgcattgcagaatgttgaagaaatatttcctgtgaagttgttgtt 37696580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 420 - 476
Target Start/End: Original strand, 37639537 - 37639593
Alignment:
Q  420 catataaagggaacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgtt 476  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  37639537 catataaagggaactggcattgcagaatgttgaagaaatgtatcctgtgaagttgtt 37639593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 420 - 476
Target Start/End: Original strand, 37823695 - 37823751
Alignment:
Q  420 catataaagggaacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgtt 476  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  37823695 catataaagggaactggcattgcagaatgttgaagaaatgtatcctgtgaagttgtt 37823751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 485 - 617
Target Start/End: Original strand, 37823847 - 37823985
Alignment:
Q  485 atgagtttaagagcctcttttgaaaccatttaaggatttccccatgaattttgttattggatagatataatcttttcagattttgt------gcttggaa 578  Q
    |||||||||||||| |||| |||||||||||  | |||| ||||||||| ||||| ||||| |||| ||||  || ||||||| ||      ||| ||||    
T  37823847 atgagtttaagagcttcttatgaaaccatttgggaattttcccatgaatgttgttgttggagagatctaatgattgcagatttggtagttgcgctaggaa 37823946  T
Q  579 tttaggaaaactattaatattagcataagataaatctaa 617  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  37823947 tttaggaaaactattaatattagcagaggataaatctaa 37823985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 426 - 476
Target Start/End: Complemental strand, 37401226 - 37401176
Alignment:
Q  426 aagggaacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgtt 476  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37401226 aagggaacttgcattgcagaatgttgaagaaatgtatcctgtgaagttgtt 37401176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 422 - 476
Target Start/End: Original strand, 37594132 - 37594186
Alignment:
Q  422 tataaagggaacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgtt 476  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  37594132 tataaagggaacttgcattgcagaatgttgaagaaatatttcctgtgaagttgtt 37594186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 423 - 476
Target Start/End: Complemental strand, 37401364 - 37401311
Alignment:
Q  423 ataaagggaacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgtt 476  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  37401364 ataaagggaactggcattgcagaatgttgaagaaatgtatcctgtgaagttgtt 37401311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 423 - 476
Target Start/End: Original strand, 37711298 - 37711351
Alignment:
Q  423 ataaagggaacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgtt 476  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  37711298 ataaagggaactggcattgcagaatgttgaagaaatgtatcctgtgaagttgtt 37711351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 575 - 630
Target Start/End: Original strand, 37533148 - 37533203
Alignment:
Q  575 ggaatttaggaaaactattaatattagcataagataaatctaagttaacaaggttg 630  Q
    |||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  37533148 ggaatttaggaaaactattaatattagcattagataattctaagtcaacaaggttg 37533203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 424 - 479
Target Start/End: Original strand, 37702478 - 37702533
Alignment:
Q  424 taaagggaacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgttgtt 479  Q
    |||||||||||||||||||||||||||||||| || | ||||||||||||||||||    
T  37702478 taaagggaacttgcattgcagaatgttgaagagatatttcctgtgaagttgttgtt 37702533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 431 - 476
Target Start/End: Original strand, 37532902 - 37532947
Alignment:
Q  431 aacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgtt 476  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  37532902 aacttgcattgcagaatgttgaagaaatatctcctgtgaagttgtt 37532947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 37428348 - 37428412
Alignment:
Q  29 attatagtagctggctttacccatgtattgcaaaccaatttggctgtcattcacgttcatcattc 93  Q
    |||||||||  |||| ||||||||||| ||||||||||||||||| |||||||| ||||||||||    
T  37428348 attatagtaattggccttacccatgtactgcaaaccaatttggctatcattcacattcatcattc 37428412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 37532414 - 37532460
Alignment:
Q  47 acccatgtattgcaaaccaatttggctgtcattcacgttcatcattc 93  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||    
T  37532414 acccttgtattgcaaaccaatttggctgtcattcacattcatcattc 37532460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 37593518 - 37593564
Alignment:
Q  47 acccatgtattgcaaaccaatttggctgtcattcacgttcatcattc 93  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||    
T  37593518 acccttgtattgcaaaccaatttggctgtcattcacattcatcattc 37593564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 422 - 476
Target Start/End: Original strand, 37639674 - 37639728
Alignment:
Q  422 tataaagggaacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgtt 476  Q
    |||||||||||||||| |||| ||||||||||||||| | |||||||||||||||    
T  37639674 tataaagggaacttgcgttgcggaatgttgaagaaatatttcctgtgaagttgtt 37639728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 37695909 - 37695955
Alignment:
Q  47 acccatgtattgcaaaccaatttggctgtcattcacgttcatcattc 93  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||    
T  37695909 acccttgtattgcaaaccaatttggctgtcattcacattcatcattc 37695955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 422 - 476
Target Start/End: Original strand, 37711432 - 37711486
Alignment:
Q  422 tataaagggaacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgtt 476  Q
    |||||||||||||||| |||| ||||||||||||||| | |||||||||||||||    
T  37711432 tataaagggaacttgcgttgcggaatgttgaagaaatatttcctgtgaagttgtt 37711486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 37435022 - 37435070
Alignment:
Q  45 ttacccatgtattgcaaaccaatttggctgtcattcacgttcatcattc 93  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  37435022 ttacccatgtattgcaaaccaatctggctatcattcacattcatcattc 37435070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 431 - 479
Target Start/End: Original strand, 37594006 - 37594054
Alignment:
Q  431 aacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgttgtt 479  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  37594006 aacttgcattgcagaatgttgaagatatatctcctgtgaaattgttgtt 37594054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 431 - 479
Target Start/End: Original strand, 37696397 - 37696445
Alignment:
Q  431 aacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgttgtt 479  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  37696397 aacttgcattgcagaatgttgaagatatatctcctgtgaaattgttgtt 37696445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 489 - 613
Target Start/End: Original strand, 37639828 - 37639958
Alignment:
Q  489 gtttaagagcctcttttgaaaccatttaaggatttccccatgaattttgttattggatagatataatcttttcagatt------ttgtgcttggaattta 582  Q
    |||||||||| |||| |||||||||||  | |||| ||||||||| ||||||||||| |||| ||| | || || |||      | ||||| |||||||     
T  37639828 gtttaagagcttcttatgaaaccatttgggaattttcccatgaatgttgttattggagagatctaaccattgcaaattatgtactcgtgctaggaatttg 37639927  T
Q  583 ggaaaactattaatattagcataagataaat 613  Q
    |||||||| |||||||||||| |||||||||    
T  37639928 ggaaaacttttaatattagcagaagataaat 37639958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 37823218 - 37823264
Alignment:
Q  47 acccatgtattgcaaaccaatttggctgtcattcacgttcatcattc 93  Q
    |||||||||||||||||||||||||  |||| |||| ||||||||||    
T  37823218 acccatgtattgcaaaccaatttggtcgtcactcacattcatcattc 37823264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 181; Significance: 2e-97; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 92 - 380
Target Start/End: Complemental strand, 16843726 - 16843438
Alignment:
Q  92 tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag 191  Q
    ||||||||||||||| ||||||| |||||||||| |||||| | || ||||||| ||| |||||||||   || || |||||||||||||||||||| ||    
T  16843726 tcaacttaggaaatggatgcttggtgctagaacaagtgattactccatgaagattattagatcgtaaaacgagtacctgtaactcttgtagagtttcaag 16843627  T
Q  192 ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttgaacagtgagccaatgactgtggtagtggtcctttcaattgg 291  Q
    |||| |||||||||||||||||||| |||||||||||||||| || |||||||||| ||||||||||| ||| |||||||||| |||||||| |||||||    
T  16843626 ccaactgggaaatgtatcctctatgttgttgtcaccaaggtccaaaacttcaagatatgaacagtgagacaaagactgtggtaatggtccttccaattgg 16843527  T
Q  292 tttccattcaactttatagtctcaaatgcatttccttttgaaaaggttctaggaatgattccatagaggttgttcatttgcatatccaa 380  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  16843526 tttccattcaactttatagtctgaaatgcatttcctttggaaaaggttttaggaatgcttccatagaggttgttcatttgcatatccaa 16843438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 100 - 420
Target Start/End: Complemental strand, 24218453 - 24218133
Alignment:
Q  100 ggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctagccaattgg 199  Q
    |||||||| || ||| |||||||||| |||||| |||| ||||||||||||||||||||||| || || ||||||||||| |||  ||||| ||||||||    
T  24218453 ggaaatgattgtttggtgctagaacaagtgattccaccatgaagatgatttgatcgtaaactgagtacctgtaactcttgcagaacttctaaccaattgg 24218354  T
Q  200 gaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttgaacagtgagccaatgactgtggtagtggtcctttcaattggtttccatt 299  Q
    |||||||||| | |||| ||||||| |||||||| || |||||||| | ||  ||||||||||| |||||||||| |||||| | ||||||||| |||||    
T  24218353 gaaatgtatcgtttatgatgttgtctccaaggtccaaaacttcaagttgtgtgcagtgagccaaagactgtggtaatggtccctccaattggttgccatt 24218254  T
Q  300 caactttatagtctcaaatgcatttccttttgaaaaggttctaggaatgattccatagaggttgttcatttgcatatccaaaatagagagaagaggaaat 399  Q
    ||||||||||||||| |||||||||||||  ||||| ||| |||| ||| ||||||||||||||||||||||||||||||| | ||| |||  |||||||    
T  24218253 caactttatagtctcgaatgcatttccttccgaaaatgttttaggcatgcttccatagaggttgttcatttgcatatccaatacagaaagataaggaaat 24218154  T
Q  400 gtccccaggcattgtggaatc 420  Q
    || ||||||||||||||||||    
T  24218153 gttcccaggcattgtggaatc 24218133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 100 - 380
Target Start/End: Complemental strand, 16846386 - 16846106
Alignment:
Q  100 ggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctagccaattgg 199  Q
    ||||||| ||||||| |||||||||| ||||||| ||| | ||| | |||||| | |||||| || || |||||||||||||||||||| |||||| |||    
T  16846386 ggaaatggatgcttggtgctagaacatgtgattgaaccataaagtttatttgaccttaaactgagtacatgtaactcttgtagagtttcaagccaactgg 16846287  T
Q  200 gaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttgaacagtgagccaatgactgtggtagtggtcctttcaattggtttccatt 299  Q
    ||||||||||||||||| |||||||||||||||| || |||||||||| |||||||| ||| || ||| |||||| |||||||| ||||||||| |||||    
T  16846286 gaaatgtatcctctatgttgttgtcaccaaggtccaaaacttcaagatatgaacagttagctaaagaccgtggtaatggtccttccaattggttgccatt 16846187  T
Q  300 caactttatagtctcaaatgcatttccttttgaaaaggttctaggaatgattccatagaggttgttcatttgcatatccaa 380  Q
    ||||||||||||  ||||  |||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  16846186 caactttatagtgacaaacacatttcctttggaaaaggttctaggaatgcttccaaagaggttgttcatttgcatatccaa 16846106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 489 - 617
Target Start/End: Complemental strand, 16843074 - 16842946
Alignment:
Q  489 gtttaagagcctcttttgaaaccatttaaggatttccccatgaattttgttattggatagatataatcttttcagattttgtgcttggaatttaggaaaa 588  Q
    |||||||||| |||| |||||||||||  | ||||  |||||||| ||||||||||| |||| ||||||||  |||||| ||| ||||||||||||||||    
T  16843074 gtttaagagcttcttatgaaaccatttgggaattttaccatgaatgttgttattggagagatctaatctttgaagatttcgtgtttggaatttaggaaaa 16842975  T
Q  589 ctattaatattagcataagataaatctaa 617  Q
    |||||||||||||||||||||||||||||    
T  16842974 ctattaatattagcataagataaatctaa 16842946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 431 - 479
Target Start/End: Complemental strand, 16843219 - 16843171
Alignment:
Q  431 aacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgttgtt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16843219 aacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgttgtt 16843171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 426 - 476
Target Start/End: Complemental strand, 16843359 - 16843309
Alignment:
Q  426 aagggaacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgtt 476  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  16843359 aagggtacttgcattgcagaatgttgaagaaatatctcctgtgaagttgtt 16843309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 16843841 - 16843796
Alignment:
Q  48 cccatgtattgcaaaccaatttggctgtcattcacgttcatcattc 93  Q
    |||||||||||||||||||| ||||| |||| ||| ||||||||||    
T  16843841 cccatgtattgcaaaccaatctggctatcatccacattcatcattc 16843796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 431 - 479
Target Start/End: Complemental strand, 16846018 - 16845970
Alignment:
Q  431 aacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgttgtt 479  Q
    |||||||| |||||||||| ||||| || ||| ||||||||||||||||    
T  16846018 aacttgcactgcagaatgtggaagacatatcttctgtgaagttgttgtt 16845970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 479
Target Start/End: Complemental strand, 24218093 - 24218041
Alignment:
Q  427 agggaacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgttgtt 479  Q
    ||||||||||||||||| | ||   ||| ||||||||||||||||||||||||    
T  24218093 agggaacttgcattgcacagtgacaaagcaatgtctcctgtgaagttgttgtt 24218041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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