View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4026_high_14 (Length: 209)
Name: NF4026_high_14
Description: NF4026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4026_high_14 |
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Alignment Details
Target: chr3 (Bit Score: 112; Significance: 8e-57; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 4764905 - 4764719
Alignment:
| Q |
17 |
cataggagaacataagagagataataacaccttttgttcttgtaatgaaaatgtatatgatgcca--------------ggatcacgggatcataacatg |
102 |
Q |
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| T |
4764905 |
cataggagaacataagagagataataacaccttttgttcttgtaatgaaa-tgtatatgatgccaattggaaaagaaagggatcacgggatcataacatg |
4764807 |
T |
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| Q |
103 |
atccgaggnnnnnnngaaagtggaagcaccttttatctctatgaagtggaaacaaaaaacgttaagaggagcagatatctcaccaaac |
190 |
Q |
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| T |
4764806 |
atccgaggaagaaaagaaagtggaagcaccttttatctctatgaagtggaaacaaaaaacgttaagaggagcagatatctcaccaaac |
4764719 |
T |
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