View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4026_high_9 (Length: 303)
Name: NF4026_high_9
Description: NF4026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4026_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 12 - 284
Target Start/End: Original strand, 23049546 - 23049818
Alignment:
| Q |
12 |
agagaggggtgagttggttaagggtagactctagaatagagggaaaaggaacaaatagaggcagttaggaacattcattgttcggtttagaaaagaaagc |
111 |
Q |
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| T |
23049546 |
agagaggggtgagttggttaagggtagactctagaatagagggaaaaggaacaaatagaggcagttaggaacattcattgttcggtttagaaaagaaagc |
23049645 |
T |
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| Q |
112 |
caatctgaactgcaaaaacagtttggtaaaaccaaaccaaatcgctcacaatgtgtcctaaaccagactaagctggtttttaggttcagtgcaccaggtt |
211 |
Q |
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| T |
23049646 |
cgatctgaactgcaaaaacagtttggtaaaaccaaaccaaatcgctcacaatgtgtcctaaaccagactaagctggtttttaggttcagtgcaccaggtt |
23049745 |
T |
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| Q |
212 |
ctgaattttttaaccaaactggtacaaaaaagaacttcagatttacaaaccgaactattttttatgcaaaccg |
284 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23049746 |
ctgaattttttaaccaaactggtacaaaaaagaacttcagatttacaaaccgaactattttttatgcaaaccg |
23049818 |
T |
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