View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4026_low_2 (Length: 619)

Name: NF4026_low_2
Description: NF4026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4026_low_2
NF4026_low_2
[»] chr6 (20 HSPs)
chr6 (11-603)||(11169878-11170470)
chr6 (11-603)||(11208700-11209292)
chr6 (21-580)||(11275272-11275831)
chr6 (270-555)||(11196305-11196575)
chr6 (457-555)||(11315049-11315147)
chr6 (430-555)||(11155997-11156122)
chr6 (430-555)||(11160864-11160989)
chr6 (430-555)||(11199440-11199565)
chr6 (430-555)||(11241739-11241864)
chr6 (428-500)||(11132719-11132791)
chr6 (270-401)||(11160719-11160850)
chr6 (339-401)||(11155921-11155983)
chr6 (339-401)||(11199364-11199426)
chr6 (82-154)||(11196117-11196189)
chr6 (349-401)||(11315188-11315240)
chr6 (270-401)||(11241878-11242009)
chr6 (287-335)||(11319818-11319866)
chr6 (109-158)||(11155697-11155746)
chr6 (346-405)||(11132652-11132711)
chr6 (105-165)||(11132411-11132471)
[»] scaffold1207 (1 HSPs)
scaffold1207 (361-580)||(546-765)


Alignment Details
Target: chr6 (Bit Score: 545; Significance: 0; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 545; E-Value: 0
Query Start/End: Original strand, 11 - 603
Target Start/End: Original strand, 11169878 - 11170470
Alignment:
Q  11 cagagacgtctaagatgccatcatcgttaatttggaagttgaccacgaaatgtagaacaccttttggacgtggaggaatttcaaactcaaaagctcctag 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11169878 cagagacgtctaagatgccatcatcgttaatttggaagttgaccacgaaatgtagaacaccttttggacgtggaggaatttcaaactcaaaagctcctag 11169977  T
Q  111 caagttgttgtccttagttatttgcctctcaccctcataaacatgaatcgaaataacttttaggttgtcttcagctgtggtgaatgacttttccctattg 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11169978 caagttgttgtccttagttatttgcctctcaccctcataaacatgaatcgaaataacttttaggttgtcttcagctgtggtgaatgacttttccctattg 11170077  T
Q  211 gtaggaatcgtggtattcctaggaattattacgctcatgaggtcccctttcatattaattccaagggacaaaggattgacatccctcaatgtcaaatctt 310  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11170078 gtaggaatcgtggtattcctaggaattattacgcccatgaggtcccctttcatattaattccaagggacaaaggattgacatccctcaatgtcaaatctt 11170177  T
Q  311 gaaacttttcacaaatcacaccacttgctataaaagcatggacagcagcgccatatgcaaccgcctcatctgcattgatgcttttacataactccgtccc 410  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  11170178 gaaacttttcacaaatcgcaccacttgctataaaagcatggacagcagcgccatatgcaaccgcctcatctacattgatgtttttacataactccgtccc 11170277  T
Q  411 actacccttttcaattccaaagaaatcaatcaaaagttgttgcacttttacaatcctggtagagccgccaacaagcacaacatcatgaatgttacttttc 510  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  11170278 actacccttattaattccaaagaaatcaatcaaacgttgttgcacttttacaatcctggtagagccgccaacaagcacaacatcatgaattttactcttc 11170377  T
Q  511 actatcccactatcttctatacacttttctacactctccatgcaccggtcaaaaagattcttgctgagattgtcgaaaagtccacgactaatc 603  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||    
T  11170378 actatcccactatcttctatacacttttctacactctccatgcaccggtcaaaaagactcttactgagattgtcgaaaattccacgactaatc 11170470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 11 - 603
Target Start/End: Original strand, 11208700 - 11209292
Alignment:
Q  11 cagagacgtctaagatgccatcatcgttaatttggaagttgaccacgaaatgtagaacaccttttggacgtggaggaatttcaaactcaaaagctcctag 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | | || |||||||||||| ||||||||||||||||||||||| ||||||    
T  11208700 cagagacgtctaagatgccatcatcgttaatttggaagttgaccacgaatttttgatcaccttttggacatggaggaatttcaaactcaaaagatcctag 11208799  T
Q  111 caagttgttgtccttagttatttgcctctcaccctcataaacatgaatcgaaataact-tttaggttgtcttcagctgtggtgaatgacttttccctatt 209  Q
    ||||||||||||||||||| ||||||||||||||||||||||   ||| || | |||| ||| |||||  ||||   |||||| ||   | |||| ||||    
T  11208800 caagttgttgtccttagttgtttgcctctcaccctcataaacggaaattgata-aactattttggttgggttcactggtggtgtatacatcttccatatt 11208898  T
Q  210 ggtaggaatcgtggtattcctaggaattattacgctcatgaggtcccctttcatattaattccaagggacaaaggattgacatccctcaatgtcaaatct 309  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11208899 ggtaggaatcgtggtattcctaggaattattacgctcatgaggccccctttgatattaattccaagggacaaaggattgacttccctcaatgtcaaatct 11208998  T
Q  310 tgaaacttttcacaaatcacaccacttgctataaaagcatggacagcagcgccatatgcaaccgcctcatctgcattgatgcttttacataactccgtcc 409  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11208999 tgaaacttttcacaaatctcaccacttgctataaaagcatggacagcagcgccatatgcaactgcctcatctgcattgatgcttttacataactccgtcc 11209098  T
Q  410 cactacccttttcaattccaaagaaatcaatcaaaagttgttgcacttttacaatcctggtagagccgccaacaagcacaacatcatgaatgttactttt 509  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  11209099 cactaccttttttaattccaaagaaatcaatcaaaagttgttgcacttttacaatcctggtagacccgccaacaagcacaacatcatgaatgttactctt 11209198  T
Q  510 cactatcccactatcttctatacacttttctacactctccatgcaccggtcaaaaagattcttgctgagattgtcgaaaagtccacgactaatc 603  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||| ||||||   | |||||||||||    
T  11209199 cactatcccactatcttctatacacttttctacaatctccatgcactggtcaaaaagactcttgttgagatcgtcgaactttgcacgactaatc 11209292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 21 - 580
Target Start/End: Original strand, 11275272 - 11275831
Alignment:
Q  21 taagatgccatcatcgttaatttggaagttgaccacgaaatgtagaacaccttttggacgtggaggaatttcaaactcaaaagctcctagcaagttgttg 120  Q
    |||||||||||||| || |||||||||||||||||| || ||  ||||| ||  ||||| ||||||||||||||||  ||||| ||||||||||||||||    
T  11275272 taagatgccatcattgtcaatttggaagttgaccaccaattgaggaacatctactggacatggaggaatttcaaacctaaaagttcctagcaagttgttg 11275371  T
Q  121 tccttagttatttgcctctcaccctcataaacatgaatcgaaataacttttaggttgtcttcagctgtggtgaatgactt-ttccctattggtaggaatc 219  Q
    ||||||||| ||| ||||||||||||||||| |  ||| | || || |||| ||||   |  || |||||||||| |||| |||| | ||||||||||||    
T  11275372 tccttagttgttttcctctcaccctcataaatactaattgcaacaaatttttggttaggtatagttgtggtgaat-acttcttccttgttggtaggaatc 11275470  T
Q  220 gtggtattcctaggaattattacgctcatgaggtcccctttcatattaattccaagggacaaaggattgacatccctcaatgtcaaatcttgaaactttt 319  Q
     |||||||||| |||| ||||    ||||||   ||| ||   | |||||||||| |||||| ||||| || ||||||||||||||||||||||||||||    
T  11275471 atggtattcctgggaaatattgttttcatgattccccattgtgttttaattccaatggacaatggattaacttccctcaatgtcaaatcttgaaactttt 11275570  T
Q  320 cacaaatcacaccacttgctataaaagcatggacagcagcgccatatgcaaccgcctcatctgcattgatgcttttacataactccgtcccactaccctt 419  Q
    |||||| | |||||||   |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||  |||  ||     
T  11275571 cacaaagctcaccactcaatataaaagcatggatagcagcgccatatgcaaccgcctcatctgcattgatgcttttgcataacttcgtcctgctatgctc 11275670  T
Q  420 ttcaattccaaagaaatcaatcaaaagttgttgcacttttacaatcctggtagagccgccaacaagcacaacatcatgaatgttacttttcactatccca 519  Q
     | |||| |||||||||||| |||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||   |||||||    
T  11275671 attaatttcaaagaaatcaaccaaaaggtcttgcacttttacaatcctggtagacccgccaacaagcacaacatcatgaatgttactcttgtttatccca 11275770  T
Q  520 ctatcttctatacacttttctacactctccatgcaccggtcaaaaagattcttgctgagat 580  Q
    |||||| ||||||||||||||||| | ||||||||| ||| ||||||| ||||| ||||||    
T  11275771 ctatctgctatacacttttctacaatttccatgcactggtaaaaaagactcttgttgagat 11275831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 270 - 555
Target Start/End: Original strand, 11196305 - 11196575
Alignment:
Q  270 tccaagggacaaaggattgacatccctcaatgtcaaatcttgaaacttttcacaaatcacaccacttgctataaaagcatggacagcagcgccatatgca 369  Q
    |||||||||||||||| |||| |||  ||||   |||||||||| ||| |||| || | |||||||   |||| |||||||||||||||||||||||||     
T  11196305 tccaagggacaaaggaatgacctccgacaatagtaaatcttgaaccttctcactaaactcaccactcaatatagaagcatggacagcagcgccatatgcc 11196404  T
Q  370 accgcctcatctgcattgatgcttttacataactccgtcccactacccttttcaattccaaagaaatcaatcaaaagttgttgcacttttacaatcctgg 469  Q
    |||||||||||  ||||||||||||| |||||   | |||| |               | ||||||||| |||  | ||||||||||||||||||||| |    
T  11196405 accgcctcatcgacattgatgcttttgcataaaagcttccccc---------------cgaagaaatcactcaccatttgttgcacttttacaatcctag 11196489  T
Q  470 tagagccgccaacaagcacaacatcatgaatgttacttttcactatcccactatcttctatacacttttctacactctccatgcac 555  Q
    |||||||||||||||| ||||||||||||||| |||| ||  | |||||||||||   |||||||||||| ||| |||||||||||    
T  11196490 tagagccgccaacaaggacaacatcatgaatgctactcttgtccatcccactatcaattatacacttttccacaatctccatgcac 11196575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 457 - 555
Target Start/End: Complemental strand, 11315147 - 11315049
Alignment:
Q  457 tttacaatcctggtagagccgccaacaagcacaacatcatgaatgttacttttcactatcccactatcttctatacacttttctacactctccatgcac 555  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||| || || ||||||||||| |||| ||||||||||||| ||| |||||||    
T  11315147 tttacaatcctagtagagccgccaacaagcacaacatcatgaatgtcactcttgaccatcccactatcctctagacacttttctacaatcttcatgcac 11315049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 430 - 555
Target Start/End: Original strand, 11155997 - 11156122
Alignment:
Q  430 aagaaatcaatcaaaagttgttgcacttttacaatcctggtagagccgccaacaagcacaacatcatgaatgttacttttcactatcccactatcttcta 529  Q
    ||||||||| |||  | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| ||  | |||||||||||   ||    
T  11155997 aagaaatcactcaccatttgttgcacttttacaatcctggtagagccaccaacaaggacaacatcatgaatgctactcttgtccatcccactatcaatta 11156096  T
Q  530 tacacttttctacactctccatgcac 555  Q
    |||||||||| ||| |||||||||||    
T  11156097 tacacttttccacaatctccatgcac 11156122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 430 - 555
Target Start/End: Original strand, 11160864 - 11160989
Alignment:
Q  430 aagaaatcaatcaaaagttgttgcacttttacaatcctggtagagccgccaacaagcacaacatcatgaatgttacttttcactatcccactatcttcta 529  Q
    ||||||||| |||  | ||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| |||| ||  | |||||||||||   ||    
T  11160864 aagaaatcactcaccatttgttgcacttttacaatcctagtagagccaccaacaaggacaacatcatgaatgctactcttgtccatcccactatcaatta 11160963  T
Q  530 tacacttttctacactctccatgcac 555  Q
    |||||||||||||| |||||||||||    
T  11160964 tacacttttctacaatctccatgcac 11160989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 430 - 555
Target Start/End: Original strand, 11199440 - 11199565
Alignment:
Q  430 aagaaatcaatcaaaagttgttgcacttttacaatcctggtagagccgccaacaagcacaacatcatgaatgttacttttcactatcccactatcttcta 529  Q
    ||||||||| |||  | ||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| |||| ||  | |||||||||||   ||    
T  11199440 aagaaatcactcaccatttgttgcacttttacaatcctagtagagccaccaacaaggacaacatcatgaatgctactcttgtccatcccactatcaatta 11199539  T
Q  530 tacacttttctacactctccatgcac 555  Q
    |||||||||||||| |||||||||||    
T  11199540 tacacttttctacaatctccatgcac 11199565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 430 - 555
Target Start/End: Complemental strand, 11241864 - 11241739
Alignment:
Q  430 aagaaatcaatcaaaagttgttgcacttttacaatcctggtagagccgccaacaagcacaacatcatgaatgttacttttcactatcccactatcttcta 529  Q
    ||||||||| |||  | |||||||||||||||||||||  ||||||| |||||||| ||||||||||||||| |||| ||  | |||||||||||   ||    
T  11241864 aagaaatcactcaccatttgttgcacttttacaatcctaatagagccaccaacaaggacaacatcatgaatgctactcttgtccatcccactatcaatta 11241765  T
Q  530 tacacttttctacactctccatgcac 555  Q
    |||||||||| ||| |||||||||||    
T  11241764 tacacttttccacaatctccatgcac 11241739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 428 - 500
Target Start/End: Original strand, 11132719 - 11132791
Alignment:
Q  428 caaagaaatcaatcaaaagttgttgcacttttacaatcctggtagagccgccaacaagcacaacatcatgaat 500  Q
    ||||||||||| |||| | |||||| |||||||||||||| ||||| ||||||||||| ||||||||||||||    
T  11132719 caaagaaatcactcaatatttgttgtacttttacaatcctcgtagacccgccaacaaggacaacatcatgaat 11132791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 270 - 401
Target Start/End: Original strand, 11160719 - 11160850
Alignment:
Q  270 tccaagggacaaaggattgacatccctcaatgtcaaatcttgaaacttttcacaaatcacaccacttgctataaaagcatggacagcagcgccatatgca 369  Q
    |||||||||||||||| |||| |||  ||||   |||||||||| ||| |||| |  | |||||||   |||| |||||||||||||||||||||||||     
T  11160719 tccaagggacaaaggaatgacctccgacaatagtaaatcttgaaccttctcactacgctcaccactcaatatagaagcatggacagcagcgccatatgcc 11160818  T
Q  370 accgcctcatctgcattgatgcttttacataa 401  Q
    || ||||||||  ||||||||||||| |||||    
T  11160819 actgcctcatcgacattgatgcttttgcataa 11160850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 339 - 401
Target Start/End: Original strand, 11155921 - 11155983
Alignment:
Q  339 tataaaagcatggacagcagcgccatatgcaaccgcctcatctgcattgatgcttttacataa 401  Q
    |||| ||||||||||||||||||||||||| |||||||||||  ||||||||||||| |||||    
T  11155921 tatagaagcatggacagcagcgccatatgccaccgcctcatcgacattgatgcttttgcataa 11155983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 339 - 401
Target Start/End: Original strand, 11199364 - 11199426
Alignment:
Q  339 tataaaagcatggacagcagcgccatatgcaaccgcctcatctgcattgatgcttttacataa 401  Q
    |||| ||||||||||||||||||||||||| |||||||||||  ||||||||||||| |||||    
T  11199364 tatagaagcatggacagcagcgccatatgccaccgcctcatcgacattgatgcttttgcataa 11199426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 82 - 154
Target Start/End: Original strand, 11196117 - 11196189
Alignment:
Q  82 ggaggaatttcaaactcaaaagctcctagcaagttgttgtccttagttatttgcctctcaccctcataaacat 154  Q
    ||||||||||| ||| ||||   ||||||||||||||||||| ||||||||| ||||||||| ||||||||||    
T  11196117 ggaggaatttccaacacaaatcttcctagcaagttgttgtccctagttattttcctctcaccttcataaacat 11196189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 349 - 401
Target Start/End: Complemental strand, 11315240 - 11315188
Alignment:
Q  349 tggacagcagcgccatatgcaaccgcctcatctgcattgatgcttttacataa 401  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| |||||    
T  11315240 tggacagcagcgccatatgcaaccgccttatcagcattgatgcttttgcataa 11315188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 401
Target Start/End: Complemental strand, 11242009 - 11241878
Alignment:
Q  270 tccaagggacaaaggattgacatccctcaatgtcaaatcttgaaacttttcacaaatcacaccacttgctataaaagcatggacagcagcgccatatgca 369  Q
    |||||||||||||| | |||| |||  ||||   |||||||||| ||| |||| || | |||||||   |||| ||||||||||| |||||||||||||     
T  11242009 tccaagggacaaagaaatgacctccgacaatagtaaatcttgaaccttctcactaaactcaccactcaatatagaagcatggacaacagcgccatatgcc 11241910  T
Q  370 accgcctcatctgcattgatgcttttacataa 401  Q
    || ||||||||  ||||||||||||| |||||    
T  11241909 acagcctcatcgacattgatgcttttgcataa 11241878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 11319866 - 11319818
Alignment:
Q  287 tgacatccctcaatgtcaaatcttgaaacttttcacaaatcacaccact 335  Q
    |||| |||||||||||||||||||||||||||||||||| | |||||||    
T  11319866 tgacttccctcaatgtcaaatcttgaaacttttcacaaaactcaccact 11319818  T

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Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 11155697 - 11155746
Alignment:
Q  109 agcaagttgttgtccttagttatttgcctctcaccctcataaacatgaat 158  Q
    ||||||||||| ||| ||||||||| ||||||||| ||||||||||||||    
T  11155697 agcaagttgttttccctagttattttcctctcaccttcataaacatgaat 11155746  T

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Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 405
Target Start/End: Original strand, 11132652 - 11132711
Alignment:
Q  346 gcatggacagcagcgccatatgcaaccgcctcatctgcattgatgcttttacataactcc 405  Q
    |||||||||||||| ||| ||||||  || ||||||||||| |||||||| |||||||||    
T  11132652 gcatggacagcagcaccacatgcaatagcttcatctgcatttatgcttttgcataactcc 11132711  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 165
Target Start/End: Original strand, 11132411 - 11132471
Alignment:
Q  105 tcctagcaagttgttgtccttagttatttgcctctcaccctcataaacatgaatcgaaata 165  Q
    |||||||||||||||  || |||||||||  || |||||||| |||||||||||| |||||    
T  11132411 tcctagcaagttgttccccatagttatttttctttcaccctcgtaaacatgaatcaaaata 11132471  T

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Target: scaffold1207 (Bit Score: 112; Significance: 3e-56; HSPs: 1)
Name: scaffold1207
Description:

Target: scaffold1207; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 361 - 580
Target Start/End: Original strand, 546 - 765
Alignment:
Q  361 ccatatgcaaccgcctcatctgcattgatgcttttacataactccgtcccactacccttttcaattccaaagaaatcaatcaaaagttgttgcactttta 460  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||  ||  | |||| |||||||||||| ||||||   ||| |||||||    
T  546 ccatatgcaaccgcctcatctgcattgatgcttttgcataacttcgtcctactatgctcattaatttcaaagaaatcaaccaaaaggccttgaactttta 645  T
Q  461 caatcctggtagagccgccaacaagcacaacatcatgaatgttacttttcactatcccactatcttctatacacttttctacactctccatgcaccggtc 560  Q
    ||||||| ||||||||||||||||| ||||||||||||| |||||| ||   ||||||||||||| ||||||| ||||||||||||||||||||| |||     
T  646 caatccttgtagagccgccaacaaggacaacatcatgaaagttactcttgtttatcccactatctgctatacagttttctacactctccatgcactggtt 745  T
Q  561 aaaaagattcttgctgagat 580  Q
    ||||||| ||||| ||||||    
T  746 aaaaagactcttgttgagat 765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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