View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4027_low_5 (Length: 304)

Name: NF4027_low_5
Description: NF4027
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4027_low_5
NF4027_low_5
[»] chr5 (32 HSPs)
chr5 (1-120)||(40145407-40145526)
chr5 (1-122)||(18520865-18520986)
chr5 (1-122)||(36732923-36733044)
chr5 (1-121)||(2740273-2740393)
chr5 (1-125)||(33149619-33149743)
chr5 (1-122)||(13811650-13811771)
chr5 (1-120)||(14831814-14831933)
chr5 (1-120)||(35785199-35785318)
chr5 (1-120)||(42414283-42414402)
chr5 (1-121)||(6679697-6679817)
chr5 (4-112)||(28177783-28177891)
chr5 (1-123)||(15409591-15409713)
chr5 (5-112)||(35943877-35943984)
chr5 (1-119)||(36875593-36875702)
chr5 (1-112)||(26720524-26720635)
chr5 (1-112)||(26990273-26990384)
chr5 (1-122)||(3921246-3921367)
chr5 (1-122)||(31008986-31009107)
chr5 (29-121)||(41470425-41470517)
chr5 (1-121)||(2252149-2252269)
chr5 (1-120)||(20073497-20073616)
chr5 (1-120)||(6259982-6260101)
chr5 (10-74)||(31132390-31132454)
chr5 (1-97)||(39557498-39557594)
chr5 (1-120)||(33825305-33825424)
chr5 (59-125)||(39688936-39689002)
chr5 (3-72)||(21370052-21370121)
chr5 (59-112)||(10356642-10356696)
chr5 (1-48)||(2177436-2177483)
chr5 (16-105)||(25831302-25831389)
chr5 (52-125)||(16327896-16327969)
chr5 (16-124)||(9603809-9603917)
[»] chr4 (37 HSPs)
chr4 (1-120)||(41236347-41236466)
chr4 (1-123)||(48183030-48183152)
chr4 (1-122)||(480428-480549)
chr4 (1-122)||(29239884-29240005)
chr4 (1-122)||(50052409-50052530)
chr4 (1-120)||(6034044-6034163)
chr4 (1-120)||(11511443-11511562)
chr4 (1-122)||(42044348-42044469)
chr4 (1-120)||(54473514-54473633)
chr4 (1-122)||(24995088-24995209)
chr4 (1-121)||(29234226-29234346)
chr4 (1-124)||(23608231-23608354)
chr4 (1-120)||(50526152-50526271)
chr4 (1-120)||(3481654-3481773)
chr4 (1-112)||(31910200-31910311)
chr4 (1-112)||(40574787-40574898)
chr4 (1-124)||(48647707-48647830)
chr4 (1-112)||(53352547-53352657)
chr4 (1-82)||(41823920-41824001)
chr4 (16-123)||(29977882-29977989)
chr4 (1-122)||(19670697-19670818)
chr4 (16-121)||(47986207-47986312)
chr4 (1-123)||(55475188-55475310)
chr4 (1-102)||(17983724-17983825)
chr4 (1-121)||(50813873-50813993)
chr4 (1-102)||(18924476-18924577)
chr4 (1-121)||(28480249-28480369)
chr4 (1-121)||(28481124-28481244)
chr4 (1-121)||(28481999-28482119)
chr4 (59-127)||(29547998-29548066)
chr4 (215-304)||(30360055-30360150)
chr4 (16-122)||(32766956-32767062)
chr4 (1-121)||(44536727-44536846)
chr4 (59-112)||(55079753-55079806)
chr4 (1-112)||(8343144-8343255)
chr4 (1-112)||(29589721-29589831)
chr4 (1-80)||(56300146-56300225)
[»] chr3 (38 HSPs)
chr3 (1-120)||(53982011-53982130)
chr3 (1-120)||(33644200-33644319)
chr3 (5-122)||(49607412-49607529)
chr3 (1-120)||(8076393-8076512)
chr3 (1-112)||(52629308-52629419)
chr3 (1-123)||(54868876-54868998)
chr3 (5-119)||(31456690-31456804)
chr3 (1-121)||(17470404-17470524)
chr3 (1-109)||(26754706-26754814)
chr3 (11-122)||(27714882-27714993)
chr3 (11-124)||(11095346-11095457)
chr3 (3-125)||(26141515-26141637)
chr3 (1-122)||(36707409-36707526)
chr3 (1-122)||(11347903-11348024)
chr3 (10-112)||(48587081-48587183)
chr3 (7-124)||(33118838-33118955)
chr3 (1-121)||(9562998-9563118)
chr3 (3-123)||(11907368-11907488)
chr3 (3-123)||(41189747-41189867)
chr3 (1-112)||(30801714-30801825)
chr3 (1-110)||(20764896-20765005)
chr3 (1-121)||(24699935-24700055)
chr3 (1-109)||(48375687-48375795)
chr3 (1-112)||(47531873-47531984)
chr3 (1-112)||(51419341-51419452)
chr3 (1-120)||(14623820-14623939)
chr3 (1-120)||(41080709-41080826)
chr3 (1-119)||(13898036-13898154)
chr3 (1-123)||(1758437-1758561)
chr3 (1-121)||(35536625-35536745)
chr3 (1-121)||(8956761-8956881)
chr3 (17-112)||(35093593-35093688)
chr3 (59-121)||(36331417-36331479)
chr3 (1-98)||(36331310-36331407)
chr3 (1-112)||(39670019-39670130)
chr3 (1-112)||(45058534-45058644)
chr3 (1-117)||(25407128-25407245)
chr3 (1-105)||(45320385-45320489)
[»] chr2 (34 HSPs)
chr2 (1-123)||(9058477-9058599)
chr2 (1-122)||(33436081-33436202)
chr2 (1-117)||(19930801-19930917)
chr2 (1-117)||(28863458-28863574)
chr2 (1-120)||(13438343-13438462)
chr2 (1-120)||(17473020-17473139)
chr2 (5-123)||(10249367-10249485)
chr2 (1-125)||(28381636-28381760)
chr2 (1-121)||(32505629-32505749)
chr2 (1-122)||(30915461-30915582)
chr2 (1-121)||(7465716-7465836)
chr2 (1-120)||(40701478-40701597)
chr2 (11-121)||(5574479-5574589)
chr2 (1-122)||(20700813-20700934)
chr2 (16-120)||(27864704-27864808)
chr2 (1-120)||(4060685-4060804)
chr2 (3-112)||(40613885-40613994)
chr2 (11-122)||(38882802-38882915)
chr2 (1-122)||(26891485-26891606)
chr2 (1-122)||(38273123-38273244)
chr2 (1-112)||(3439987-3440098)
chr2 (3-122)||(42257191-42257310)
chr2 (1-121)||(2533123-2533242)
chr2 (1-121)||(33436210-33436330)
chr2 (1-112)||(17819985-17820096)
chr2 (1-119)||(41575138-41575257)
chr2 (1-121)||(36168835-36168955)
chr2 (1-102)||(2997468-2997569)
chr2 (1-112)||(38732362-38732473)
chr2 (1-112)||(43490129-43490240)
chr2 (3-77)||(3737986-3738060)
chr2 (1-122)||(45097716-45097837)
chr2 (1-104)||(13365369-13365472)
chr2 (51-125)||(17823779-17823853)
[»] chr1 (34 HSPs)
chr1 (1-122)||(2581913-2582034)
chr1 (1-120)||(9474857-9474976)
chr1 (1-122)||(38632302-38632423)
chr1 (1-120)||(47452301-47452420)
chr1 (1-120)||(48716263-48716382)
chr1 (1-120)||(3000319-3000438)
chr1 (1-120)||(27564716-27564835)
chr1 (1-122)||(38595152-38595273)
chr1 (1-121)||(50630457-50630577)
chr1 (170-304)||(19915452-19915577)
chr1 (5-122)||(8346373-8346490)
chr1 (1-122)||(32813245-32813366)
chr1 (1-121)||(41758804-41758924)
chr1 (1-121)||(51898664-51898784)
chr1 (1-120)||(43132-43251)
chr1 (1-117)||(44548357-44548473)
chr1 (1-120)||(37649198-37649317)
chr1 (1-123)||(49811508-49811630)
chr1 (1-119)||(11152359-11152476)
chr1 (1-90)||(13414791-13414880)
chr1 (1-125)||(45044541-45044665)
chr1 (10-123)||(26274429-26274542)
chr1 (1-93)||(48489328-48489419)
chr1 (1-112)||(50590981-50591092)
chr1 (1-122)||(5958981-5959102)
chr1 (1-122)||(23597072-23597193)
chr1 (10-108)||(26440746-26440844)
chr1 (1-100)||(6260890-6260989)
chr1 (1-121)||(37926419-37926539)
chr1 (1-112)||(41608474-41608585)
chr1 (1-112)||(44453987-44454098)
chr1 (121-178)||(19914343-19914400)
chr1 (1-126)||(3302514-3302639)
chr1 (26-95)||(44334176-44334245)
[»] chr6 (21 HSPs)
chr6 (1-125)||(32869673-32869797)
chr6 (1-117)||(22880639-22880755)
chr6 (1-120)||(17598554-17598673)
chr6 (1-121)||(11427615-11427737)
chr6 (1-122)||(6209446-6209567)
chr6 (5-108)||(31109385-31109488)
chr6 (1-121)||(31976247-31976367)
chr6 (1-120)||(29857827-29857946)
chr6 (1-122)||(31110742-31110861)
chr6 (5-122)||(23128112-23128229)
chr6 (3-122)||(15832575-15832694)
chr6 (1-123)||(15990023-15990145)
chr6 (1-122)||(30341341-30341462)
chr6 (1-112)||(946384-946495)
chr6 (1-112)||(15508005-15508116)
chr6 (4-112)||(28536472-28536578)
chr6 (1-120)||(31953011-31953130)
chr6 (1-98)||(4231570-4231667)
chr6 (1-122)||(12732480-12732601)
chr6 (1-66)||(30870068-30870133)
chr6 (16-112)||(9379708-9379804)
[»] chr8 (33 HSPs)
chr8 (1-120)||(12831047-12831166)
chr8 (1-120)||(40423924-40424043)
chr8 (1-123)||(14547919-14548041)
chr8 (1-120)||(1179921-1180040)
chr8 (5-120)||(15197333-15197448)
chr8 (1-125)||(34012277-34012401)
chr8 (1-120)||(504102-504221)
chr8 (1-120)||(23122578-23122697)
chr8 (1-121)||(37038478-37038598)
chr8 (1-119)||(5957831-5957949)
chr8 (1-101)||(8841413-8841513)
chr8 (1-121)||(44507068-44507188)
chr8 (1-112)||(10621068-10621179)
chr8 (1-112)||(43414562-43414673)
chr8 (1-122)||(10284612-10284733)
chr8 (1-112)||(15048162-15048273)
chr8 (1-125)||(15258910-15259034)
chr8 (1-123)||(4854844-4854966)
chr8 (1-119)||(9122196-9122304)
chr8 (1-122)||(16383375-16383496)
chr8 (40-112)||(14055612-14055684)
chr8 (1-122)||(34307214-34307335)
chr8 (1-125)||(24307774-24307898)
chr8 (1-112)||(30479455-30479566)
chr8 (1-127)||(20074923-20075041)
chr8 (1-121)||(25838196-25838308)
chr8 (1-104)||(38229445-38229547)
chr8 (1-122)||(42221513-42221634)
chr8 (59-122)||(24307627-24307690)
chr8 (59-121)||(32032724-32032785)
chr8 (1-122)||(16056382-16056503)
chr8 (1-121)||(17443824-17443944)
chr8 (1-48)||(40467772-40467819)
[»] chr7 (40 HSPs)
chr7 (8-125)||(7389384-7389501)
chr7 (1-122)||(8080364-8080485)
chr7 (1-120)||(35137533-35137652)
chr7 (1-120)||(38267040-38267159)
chr7 (1-122)||(38837215-38837336)
chr7 (1-120)||(19329842-19329961)
chr7 (1-117)||(3783998-3784114)
chr7 (1-119)||(32951474-32951592)
chr7 (11-121)||(36361904-36362014)
chr7 (10-121)||(3434561-3434672)
chr7 (1-120)||(4999495-4999614)
chr7 (11-121)||(36362025-36362135)
chr7 (1-122)||(40957705-40957826)
chr7 (5-122)||(19436172-19436289)
chr7 (1-117)||(3694370-3694486)
chr7 (1-121)||(46033782-46033902)
chr7 (1-123)||(36208170-36208292)
chr7 (1-121)||(26296643-26296763)
chr7 (16-127)||(38044190-38044301)
chr7 (1-112)||(8238220-8238332)
chr7 (8-112)||(21234409-21234513)
chr7 (1-112)||(35522884-35522995)
chr7 (1-122)||(10343544-10343665)
chr7 (1-122)||(18207178-18207298)
chr7 (1-112)||(39255905-39256015)
chr7 (1-112)||(40846094-40846205)
chr7 (25-112)||(46374807-46374894)
chr7 (1-122)||(11044186-11044297)
chr7 (1-121)||(22343360-22343480)
chr7 (1-121)||(41915740-41915860)
chr7 (1-112)||(31735892-31735996)
chr7 (1-122)||(7727904-7728025)
chr7 (1-122)||(35468836-35468957)
chr7 (1-121)||(12310905-12311023)
chr7 (1-86)||(27744290-27744375)
chr7 (1-112)||(32564407-32564518)
chr7 (1-112)||(41423690-41423801)
chr7 (16-90)||(16374820-16374894)
chr7 (51-122)||(45223040-45223111)
chr7 (1-97)||(2318224-2318320)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-122)||(10090-10211)
[»] scaffold1268 (1 HSPs)
scaffold1268 (1-120)||(910-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (1-120)||(910-1029)
[»] scaffold0237 (1 HSPs)
scaffold0237 (1-120)||(4029-4148)
[»] scaffold0316 (1 HSPs)
scaffold0316 (6-97)||(17077-17168)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-108)||(8844-8951)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-104)||(152514-152617)


Alignment Details
Target: chr5 (Bit Score: 100; Significance: 2e-49; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 40145526 - 40145407
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  40145526 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagg 40145427  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  40145426 gtgtctatgtatcattactc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 18520865 - 18520986
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  18520865 agagaagaggagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 18520964  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||||||||||| |||| ||||    
T  18520965 gtgtctatgtatcattattctt 18520986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 36732923 - 36733044
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||||| |||||||||||||||||| ||||||||    
T  36732923 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagg 36733022  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||||||||||| |||||||||    
T  36733023 gtgtctatgtatcattactctt 36733044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 2740393 - 2740273
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||| |||||||||||||||| |||||||||||||  ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  2740393 agagaaggggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 2740294  T
Q  101 gtgtctatgtatgattactct 121  Q
     ||||||||||| ||||||||    
T  2740293 atgtctatgtatcattactct 2740273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 33149619 - 33149743
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||||| | |||||||||||| |||||||||||||||| ||||||||||    
T  33149619 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagg 33149718  T
Q  101 gtgtctatgtatgattactcttaaa 125  Q
    |||||||||||| ||||||| ||||    
T  33149719 gtgtctatgtatcattactcataaa 33149743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 13811771 - 13811650
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| ||||||| | |||||||||||||||||    
T  13811771 agagaagaggagagagaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagg 13811672  T
Q  101 gtgtctatgtatgattactctt 122  Q
    ||||||||||||  ||||||||    
T  13811671 gtgtctatgtatctttactctt 13811650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 14831933 - 14831814
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||||||| |||| ||||| |||||||||||||  ||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||     
T  14831933 agagaagaggagaaaaaaaagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaga 14831834  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  14831833 gtgtctatgtatcattactc 14831814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 35785318 - 35785199
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||||||||||||| |||| ||||||||  ||||||| ||||||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  35785318 agagaagatgagagaaaagagaaagtgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagg 35785219  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  35785218 gtgtctatgtatcattactc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 42414283 - 42414402
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||||| |||||||| ||| ||||||||||||| |||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||  |    
T  42414283 agagaagaggaaagaaaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactg 42414382  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  42414383 gtgtctatgtatcattactc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 6679817 - 6679697
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||||||||||||||||||||||| |||||||| ||||| ||||| |||||| |||||||||||||| ||||||| ||||||||||||||||| |    
T  6679817 agagaagaggagagaaaagagaaaatgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaag 6679718  T
Q  101 gtgtctatgtatgattactct 121  Q
     ||||||||||| || |||||    
T  6679717 atgtctatgtatcataactct 6679697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 28177891 - 28177783
Alignment:
Q  4 gaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtg 103  Q
    ||||||||||||||||||||| |||| |||||||| ||||| ||||| |||||| |||||||||||||| ||||||||||||||||||||||||||| ||    
T  28177891 gaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatg 28177792  T
Q  104 tctatgtat 112  Q
    |||||||||    
T  28177791 tctatgtat 28177783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 15409591 - 15409713
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||| | ||||||||||||| ||||| ||| |||||||| |||||||||||||| ||||||||  ||||||| |||||||||    
T  15409591 agagaagaggagagaaaagagagagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaagg 15409690  T
Q  101 gtgtctatgtatgattactctta 123  Q
     ||||||||||| || |||||||    
T  15409691 atgtctatgtatcataactctta 15409713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 35943877 - 35943984
Alignment:
Q  5 aagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgt 104  Q
    |||||||||| ||||||||| |||||||||| ||  ||||||| ||||||||| |||||||||||||| ||||||| | |||||||||||||||||||||    
T  35943877 aagaggagaggaaagagaaagtgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgt 35943976  T
Q  105 ctatgtat 112  Q
    ||||||||    
T  35943977 ctatgtat 35943984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 36875593 - 36875702
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||||||| |||||||||| |||||||||||||  ||||||||||||         ||||||||||| |||||||||||||||||||||||||||    
T  36875593 agagaagaggagaaaaaagagaaagtgtgcttgtgcgggatccacgtgacta---------tttttgtgtgggtgtcaaagggtgtattgccacctaagg 36875683  T
Q  101 gtgtctatgtatgattact 119  Q
    |||||||||||| ||||||    
T  36875684 gtgtctatgtatcattact 36875702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 26720635 - 26720524
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||||||||||||| |||||||||||||  |||| ||| | |||||| |||||||| ||| | ||| |||||||||||||||||||||||    
T  26720635 agagaagagaagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaagg 26720536  T
Q  101 gtgtctatgtat 112  Q
     |||||||||||    
T  26720535 atgtctatgtat 26720524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 26990384 - 26990273
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||||||||||||| |||||||||||||  |||| ||| | |||||| |||||||| ||| | ||| |||||||||||||||||||||||    
T  26990384 agagaagagaagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaagg 26990285  T
Q  101 gtgtctatgtat 112  Q
     |||||||||||    
T  26990284 atgtctatgtat 26990273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 3921246 - 3921367
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  || | || ||| |||||||||||||| |||||| ||||||||||||||||||||    
T  3921246 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 3921345  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||| ||||||| || ||||||    
T  3921346 gtgtttatgtatcataactctt 3921367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 31009107 - 31008986
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||| ||| ||||| |||||||||||||  ||||||||||||||||| |||||||||||||| |||  |||  ||||||| |||||||||    
T  31009107 agagaagagaagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaagg 31009008  T
Q  101 gtgtctatgtatgattactctt 122  Q
     ||| ||||||| || ||||||    
T  31009007 atgtttatgtatcataactctt 31008986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 41470425 - 41470517
Alignment:
Q  29 gcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatgattactct 121  Q
    |||||||||| |||||||||||||||||| |||||||| | || || | ||||| ||||||||||||||| ||||||||||||| ||||||||    
T  41470425 gcttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtattattactct 41470517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 2252149 - 2252269
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  || | || ||| |||||||||||||| |||||| ||||||||||||||||||||    
T  2252149 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 2252248  T
Q  101 gtgtctatgtatgattactct 121  Q
     ||| ||||||| || |||||    
T  2252249 atgtttatgtatcataactct 2252269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 20073497 - 20073616
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||| ||||| ||||||||||| | |||||||||   ||||| ||||||||| ||||  ||||||||||||||||| || |||| |    
T  20073497 agagaagaggagaggaaatagaaagtgtgcttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatg 20073596  T
Q  101 gtgtctatgtatgattactc 120  Q
     ||||||| ||| |||||||    
T  20073597 atgtctatatatcattactc 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 6259982 - 6260101
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||  ||||||||| ||||||| || |  ||||| ||||| | |||| ||||||||| |||| ||| ||||||||||||| |||||| ||    
T  6259982 agagaagaggagatgaaagagaaagtgtgcttctgtgaggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatgg 6260081  T
Q  101 gtgtctatgtatgattactc 120  Q
     ||| ||||||| |||||||    
T  6260082 ttgtgtatgtatcattactc 6260101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 31132454 - 31132390
Alignment:
Q  10 gagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggat 74  Q
    ||||||||||| ||| | ||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  31132454 gagagaaaagaaaaagtatgcttgtgcggggtccacgtgactacttgtcagatttttgtgtggat 31132390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 39557498 - 39557594
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccaccta 97  Q
    ||||||||||||| |||||||||| |||| ||||  || ||||| ||||  |||||| |||||||||||||||||| ||  |||||||| |||||||    
T  39557498 agagaagaggagataaaagagaaagtgtgattgtatggggtccatgtgatcacgtgtcagatttttgtgtggatgttaagaggtgtattaccaccta 39557594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 33825305 - 33825424
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| ||| |||||||||| ||||||||||    || ||| |||  |||||| |||||||| ||||| |||||| | |||||||||||||||||     
T  33825305 agagaagagaagataaaagagaaagtgtgcttgtgtaaggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaaga 33825404  T
Q  101 gtgtctatgtatgattactc 120  Q
     |||||||| || |||||||    
T  33825405 atgtctatgcatcattactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 39688936 - 39689002
Alignment:
Q  59 agatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatgattactcttaaa 125  Q
    |||||||||||||| |||||| || ||||||||||| ||||||||| ||||||| || |||||||||    
T  39688936 agatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcataactcttaaa 39689002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 21370121 - 21370052
Alignment:
Q  3 agaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtgg 72  Q
    |||||| ||||| |||||||||||||| |||||||| ||||||||||| || ||| ||||||||| ||||    
T  21370121 agaagatgagaggaaagagaaaatgtgtttgtgcggggtccacgtgaccacatgtcagatttttgagtgg 21370052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 10356696 - 10356642
Alignment:
Q  59 agatttttgtgtggatgtcaaaggg-tgtattgccacctaagggtgtctatgtat 112  Q
    |||||||||||||| |||||| ||| ||||||||||||||||| |||||||||||    
T  10356696 agatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtat 10356642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 2177483 - 2177436
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtg 48  Q
    |||||||||||||| |||||||||||||||||||| ||  ||||||||    
T  2177483 agagaagaggagaggaaagagaaaatgtgcttgtgtgggatccacgtg 2177436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 25831389 - 25831302
Alignment:
Q  16 aaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtc 105  Q
    |||||||||||||| ||||| || |||||| |||| |||||| |||||||| |||| || || |  ||||||||||||| ||||| ||||    
T  25831389 aaagagaaaatgtgtttgtgtggggtccacatgaccacgtgttagatttttttgtgaatctcga--ggtgtattgccacttaaggatgtc 25831302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 16327969 - 16327896
Alignment:
Q  52 acgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatgattactcttaaa 125  Q
    |||||| |||||||| ||||| |||||| || ||||||||||||||||| | | ||| ||| |||||| |||||    
T  16327969 acgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatttatctatcattacttttaaa 16327896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 9603917 - 9603809
Alignment:
Q  16 aaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatgat 115  Q
    ||||||||| |||| ||||  || |||||  |||| | |||| |||||||||||| | ||| || | |||||||  ||||||||| ||| ||||||| ||    
T  9603917 aaagagaaagtgtgattgtatggggtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtattatcacctaaggatgtatatgtatcat 9603818  T
Q  116 tactcttaa 124  Q
    |||||||||    
T  9603817 tactcttaa 9603809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 41236466 - 41236347
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  41236466 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagg 41236367  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  41236366 gtgtctatgtatcattactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 48183030 - 48183152
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||    
T  48183030 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagg 48183129  T
Q  101 gtgtctatgtatgattactctta 123  Q
    |||||||||||| ||||||||||    
T  48183130 gtgtctatgtatcattactctta 48183152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 480428 - 480549
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||    
T  480428 agagaagaggagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagg 480527  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||||||||||| |||||||||    
T  480528 gtgtctatgtatcattactctt 480549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 29240005 - 29239884
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  29240005 agagaagaggagaggaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagg 29239906  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||||||||||| |||||||||    
T  29239905 gtgtctatgtatcattactctt 29239884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 50052409 - 50052530
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  50052409 agagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 50052508  T
Q  101 gtgtctatgtatgattactctt 122  Q
     ||||||||||| |||||||||    
T  50052509 atgtctatgtatcattactctt 50052530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 6034163 - 6034044
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||    
T  6034163 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 6034064  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  6034063 gtgtctatgtatcattactc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 11511443 - 11511562
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||    
T  11511443 agagaagagaagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 11511542  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  11511543 gtgtctatgtatcattactc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 42044348 - 42044469
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| |||  |||| |||||||||||||||||    
T  42044348 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagg 42044447  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||||||||||| |||||||||    
T  42044448 gtgtctatgtatcattactctt 42044469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 54473514 - 54473633
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||| ||||||| ||||||||| |||||||||    
T  54473514 agagaagaggagagaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagg 54473613  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  54473614 gtgtctatgtatcattactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 24995088 - 24995209
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||| ||||| |||||||||||||||||||| ||||||    
T  24995088 agagaagaggagagaaaagagaaaatgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagg 24995187  T
Q  101 gtgtctatgtatgattactctt 122  Q
    ||||| || ||| |||||||||    
T  24995188 gtgtccatatatcattactctt 24995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 29234226 - 29234346
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||  | | |||||||||||||||||| ||||||    
T  29234226 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagg 29234325  T
Q  101 gtgtctatgtatgattactct 121  Q
    |||||||||||| ||||||||    
T  29234326 gtgtctatgtatcattactct 29234346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 23608354 - 23608231
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||||||| |||||||||| |||||||||| ||||| ||||||||||||||| |||||||||||||| ||||||| ||||||||| || ||||||    
T  23608354 agagaagaggagataaaagagaaagtgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagg 23608255  T
Q  101 gtgtctatgtatgattactcttaa 124  Q
    |||||||| ||| |||||||||||    
T  23608254 gtgtctatatatcattactcttaa 23608231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 50526152 - 50526271
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||| |||||  ||||||||||||| |||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||| |    
T  50526152 agagaagaggagaggaaatagaaagcgtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaag 50526251  T
Q  101 gtgtctatgtatgattactc 120  Q
     ||||||||||| |||||||    
T  50526252 atgtctatgtatcattactc 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 3481773 - 3481654
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| | ||| ||||||||| |||||||||| || ||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||| |    
T  3481773 agagaagatgggaggaaagagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaag 3481674  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  3481673 gtgtctatgtatcattactc 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 31910311 - 31910200
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||| ||| ||| |||| |||||||||||||| |||||||| |||||||| |||||||||    
T  31910311 agagaagatgagagaaaagagaaagtgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaagg 31910212  T
Q  101 gtgtctatgtat 112  Q
     |||||||||||    
T  31910211 atgtctatgtat 31910200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 40574898 - 40574787
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||| |||  |||| ||  |  ||||| |||||||||||||| |||||||||||||||| ||||||||||    
T  40574898 agagaagaggagagaaaagagaaagtgtgcttgttcgggatccatgtagcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagg 40574799  T
Q  101 gtgtctatgtat 112  Q
     |||||||||||    
T  40574798 atgtctatgtat 40574787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 48647707 - 48647830
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||| |||||||| ||||| ||| ||  |||||||||  ||||||||    
T  48647707 agagaagaggagaggaaagagaaattgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaagg 48647806  T
Q  101 gtgtctatgtatgattactcttaa 124  Q
     ||| ||||| | || ||||||||    
T  48647807 atgtttatgtgtcataactcttaa 48647830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 53352547 - 53352657
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| | ||||||||||| |||||| | ||||||||| |||||||||||| | ||| ||||  ||||||| |||||||||    
T  53352547 agagaagaggagagaaaagagaaagtatgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagg 53352645  T
Q  101 gtgtctatgtat 112  Q
    ||||||||||||    
T  53352646 gtgtctatgtat 53352657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 41824001 - 41823920
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagg 82  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||| |||||||||||| |||||||||||||| ||| |||||    
T  41824001 agagaagaagagagaaaagagaaagtgtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtgggtgttaaagg 41823920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 29977989 - 29977882
Alignment:
Q  16 aaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatgat 115  Q
    ||||||||| |||||||||| || |||||  ||||||||||| |||||||||||||| ||| || ||||||||||||||||| || | | ||||||| ||    
T  29977989 aaagagaaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcat 29977890  T
Q  116 tactctta 123  Q
    ||||||||    
T  29977889 tactctta 29977882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 19670697 - 19670818
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  || | || ||| |||||||||||||  |||||| ||||||||||||||||||||    
T  19670697 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagg 19670796  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||| ||||||| || ||||||    
T  19670797 gtgtttatgtatcataactctt 19670818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 47986312 - 47986207
Alignment:
Q  16 aaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatgat 115  Q
    ||||||||| ||| ||||||||| |||||  || | || ||| ||||||||||||||||||||| || ||||||||||||||||||||| ||||||| ||    
T  47986312 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcat 47986213  T
Q  116 tactct 121  Q
     |||||    
T  47986212 aactct 47986207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 55475310 - 55475188
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||| ||| | |||||  || | || ||| |||||||||||||| |||||||||||||||||||||||||||    
T  55475310 agagaagagaagaagaaagagaaagtgtacttatgcagggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 55475211  T
Q  101 gtgtctatgtatgattactctta 123  Q
     ||| ||||||| || |||||||    
T  55475210 atgtttatgtatcataactctta 55475188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 17983724 - 17983825
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  || | || ||| |||||||||||||| |||||| ||||||||||||||||||||    
T  17983724 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 17983823  T
Q  101 gt 102  Q
    ||    
T  17983824 gt 17983825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 50813873 - 50813993
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||| || ||  |||| || ||| |||||||||||||| |||||| ||||||||| |||||||||     
T  50813873 agagaagagaagaagaaagagaaagtgtacttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaaga 50813972  T
Q  101 gtgtctatgtatgattactct 121  Q
    |||| ||||||| || |||||    
T  50813973 gtgtttatgtatcataactct 50813993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 18924476 - 18924577
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| |||||||||||| ||  |  | || ||| |||||||||||||||| |||| ||||||||||||||||||||    
T  18924476 agagaagagaagaagaaagagaaagtgtacttgtgcggagttcatattgccacatgtcagatttttgtgtggatatcaaggggtgtattgccacctaagg 18924575  T
Q  101 gt 102  Q
    ||    
T  18924576 gt 18924577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 28480249 - 28480369
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||  || |||||| |||| ||||| || |||||| ||||||| ||| |||||||||||||  ||| ||   |||||||| |||||||||    
T  28480249 agagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaagg 28480348  T
Q  101 gtgtctatgtatgattactct 121  Q
     ||||||||||| || |||||    
T  28480349 ttgtctatgtattataactct 28480369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 28481124 - 28481244
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||  || |||||| |||| ||||| || |||||| ||||||| ||| |||||||||||||  ||| ||   |||||||| |||||||||    
T  28481124 agagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaagg 28481223  T
Q  101 gtgtctatgtatgattactct 121  Q
     ||||||||||| || |||||    
T  28481224 ttgtctatgtattataactct 28481244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 28481999 - 28482119
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||  || |||||| |||| ||||| || |||||| ||||||| ||| |||||||||||||  ||| ||   |||||||| |||||||||    
T  28481999 agagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaagg 28482098  T
Q  101 gtgtctatgtatgattactct 121  Q
     ||||||||||| || |||||    
T  28482099 ttgtctatgtattataactct 28482119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 29547998 - 29548066
Alignment:
Q  59 agatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatgattactcttaaatt 127  Q
    |||||||||||||| |||||| || ||||||||||||||||| ||| ||||||| || |||||||||||    
T  29547998 agatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactcttaaatt 29548066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 304
Target Start/End: Original strand, 30360055 - 30360150
Alignment:
Q  215 gcattagctgcaatttagaaaaatttacaataaagaatacag----aactattacactattacagagactcct--agtgaggtgtcaaggattcaa 304  Q
    |||||| ||||||||| ||||||||||||  |||||||||||    ||||||||||||||||||| ||| |||  || ||||||||||||||||||    
T  30360055 gcattacctgcaattttgaaaaatttacatcaaagaatacagatttaactattacactattacagtgacacctagagggaggtgtcaaggattcaa 30360150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 32767062 - 32766956
Alignment:
Q  16 aaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatgat 115  Q
    ||||||||| ||| ||||||| | |||||  || | || ||| |||||||||| ||| |||||| ||||||||||||||||||| |||| ||||||| ||    
T  32767062 aaagagaaagtgtacttgtgcagggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcat 32766963  T
Q  116 tactctt 122  Q
     ||||||    
T  32766962 aactctt 32766956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 44536727 - 44536846
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||| || || ||| |  |||| || ||| ||||||||||||||||||| ||||||||||||||||||||      
T  44536727 agagaagagaagaagaaagagaaagtgtacttatgtggggtctatatgaccacatgtcagatttttgtgtggatgtc-aagggtgtattgccacctaaaa 44536825  T
Q  101 gtgtctatgtatgattactct 121  Q
    |||| ||||||| || |||||    
T  44536826 gtgtttatgtatcataactct 44536846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 55079753 - 55079806
Alignment:
Q  59 agatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtat 112  Q
    |||||||||| ||| ||||||  ||||||||||||||||||||||| |||||||    
T  55079753 agatttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtat 55079806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 8343144 - 8343255
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| | | ||| ||||| |||||  || | || ||| |||||||| ||| | ||||||||| |||||||||||||||||    
T  8343144 agagaagagaagaagaaagagaaagtatacttatgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatgtattgccacctaagg 8343243  T
Q  101 gtgtctatgtat 112  Q
     ||| |||||||    
T  8343244 atgtttatgtat 8343255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 29589721 - 29589831
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| |||||| || |||||  || | || | | |||||||||||||| |||||| |||||||||| || ||||||    
T  29589721 agagaagagaagaagaaagagaaagtgtacttgtgtggggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtattg-caactaagg 29589819  T
Q  101 gtgtctatgtat 112  Q
    |||| |||||||    
T  29589820 gtgtttatgtat 29589831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 56300146 - 56300225
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaa 80  Q
    |||||||||||||| ||||||||| |||| |||||| |  | ||  |||| || ||| ||||||||||||||||||||||    
T  56300146 agagaagaggagaggaaagagaaagtgtgtttgtgcaggattcatatgaccacatgtcagatttttgtgtggatgtcaaa 56300225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 53982130 - 53982011
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  53982130 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 53982031  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  53982030 gtgtctatgtatcattactc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 33644319 - 33644200
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||    
T  33644319 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagg 33644220  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  33644219 gtgtctatgtatcattactc 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 49607529 - 49607412
Alignment:
Q  5 aagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgt 104  Q
    |||||||||||||||||||| |||||||||| ||  ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  49607529 aagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgt 49607430  T
Q  105 ctatgtatgattactctt 122  Q
    |||||||| |||||||||    
T  49607429 ctatgtatcattactctt 49607412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 8076512 - 8076393
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||    
T  8076512 agagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagg 8076413  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||| ||||||| |||||||    
T  8076412 gtgtttatgtatcattactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 52629419 - 52629308
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  52629419 agagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 52629320  T
Q  101 gtgtctatgtat 112  Q
    ||||||||||||    
T  52629319 gtgtctatgtat 52629308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 54868876 - 54868998
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||||||||||||| |||| |||||||| |||||||| ||||||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  54868876 agagaagatgagagaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagg 54868975  T
Q  101 gtgtctatgtatgattactctta 123  Q
    |||||||||||| ||||||||||    
T  54868976 gtgtctatgtatcattactctta 54868998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 31456804 - 31456690
Alignment:
Q  5 aagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgt 104  Q
    |||||||||||||||||||| ||||||||||||| |||||| ||||||||||| |||||||||||||| ||||||||||||||||||| |||| ||||||    
T  31456804 aagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgt 31456705  T
Q  105 ctatgtatgattact 119  Q
    |||||||| ||||||    
T  31456704 ctatgtatcattact 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 17470524 - 17470404
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||||||||||||| |||||||||| || |||||||||||||||||| |||||||||||||| ||| ||| ||||||||||||||||| |    
T  17470524 agagaagatgagagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaag 17470425  T
Q  101 gtgtctatgtatgattactct 121  Q
    |||||||||||| ||||||||    
T  17470424 gtgtctatgtatcattactct 17470404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 26754814 - 26754706
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| ||||| || ||| ||||||||||||||||||| ||||||||||||||||||||||    
T  26754814 agagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagg 26754715  T
Q  101 gtgtctatg 109  Q
    |||||||||    
T  26754714 gtgtctatg 26754706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 27714882 - 27714993
Alignment:
Q  11 agagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgt 110  Q
    ||||| |||||||| ||||||||||||| |||||| ||||||||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||||    
T  27714882 agagagaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgt 27714981  T
Q  111 atgattactctt 122  Q
    || |||||||||    
T  27714982 atcattactctt 27714993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 11095346 - 11095457
Alignment:
Q  11 agagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgt 110  Q
    |||||||||||||| |||| || ||||| ||  |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11095346 agagaaaagagaaagtgtgtttatgcggggt--acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgt 11095443  T
Q  111 atgattactcttaa 124  Q
    || |||||||||||    
T  11095444 atcattactcttaa 11095457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 125
Target Start/End: Original strand, 26141515 - 26141637
Alignment:
Q  3 agaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggt 102  Q
    |||||||||||||||||||||| |||||||||| || ||||| ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| |    
T  26141515 agaagaggagagaaaagagaaagtgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggat 26141614  T
Q  103 gtctatgtatgattactcttaaa 125  Q
    |||||||||| || |||| ||||    
T  26141615 gtctatgtatcataactcataaa 26141637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 36707409 - 36707526
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| |||||    ||||  ||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  36707409 agagaagaggagagaaaagagaaagtgtgc----gcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagg 36707504  T
Q  101 gtgtctatgtatgattactctt 122  Q
    || ||||||||| |||||||||    
T  36707505 gtatctatgtatcattactctt 36707526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 11347903 - 11348024
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||| ||| | ||||| ||| | |||||| |||||||||||||||||||||||| ||||||| |||||||||    
T  11347903 agagaagaggagagaaaagagaaagtgtgcttatgcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaagg 11348002  T
Q  101 gtgtctatgtatgattactctt 122  Q
     ||||||||||| || ||||||    
T  11348003 atgtctatgtatcataactctt 11348024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 48587081 - 48587183
Alignment:
Q  10 gagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatg 109  Q
    ||||||||||||||| ||| |||||||||  ||||||||||||||||| |||||||| ||| | ||||||||||||||||||||||||||||| ||||||    
T  48587081 gagagaaaagagaaagtgtacttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatg 48587180  T
Q  110 tat 112  Q
    |||    
T  48587181 tat 48587183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 33118838 - 33118955
Alignment:
Q  7 gaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtct 106  Q
    |||||||| ||||||||| |||| || || ||  ||||||||||||||||| | |||||||||||| ||||||||||||||||| |||||||||||||||    
T  33118838 gaggagaggaaagagaaagtgtgtttctgagggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtct 33118937  T
Q  107 atgtatgattactcttaa 124  Q
    |||||| || ||||||||    
T  33118938 atgtatcataactcttaa 33118955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 9563118 - 9562998
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||| ||||||| |||| |||||| |  ||||||||||||||||| |||||||| | ||||||||||||| ||||||| || |||| |    
T  9563118 agagaagaggagagaagagagaaagtgtgtttgtgcaggatccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatg 9563019  T
Q  101 gtgtctatgtatgattactct 121  Q
    |||| ||||||| ||||||||    
T  9563018 gtgtttatgtatcattactct 9562998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 11907488 - 11907368
Alignment:
Q  3 agaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggt 102  Q
    |||||||||||||||||||||||||||||||||||| |||||  |||| || ||| |||||||||||||  |||  | | |||||||| |||||||||||    
T  11907488 agaagaggagagaaaagagaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggt 11907389  T
Q  103 gtctatgtatgattactctta 123  Q
    |||||||||| || |||||||    
T  11907388 gtctatgtatcataactctta 11907368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 41189747 - 41189867
Alignment:
Q  3 agaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggt 102  Q
    |||||||||||||||||||||| ||||||||||||| ||||| ||| | |||||| | |||||| ||||| ||||||| | ||||||||||||||||| |    
T  41189747 agaagaggagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggat 41189846  T
Q  103 gtctatgtatgattactctta 123  Q
    || ||||||| || |||||||    
T  41189847 gtatatgtatcataactctta 41189867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 30801714 - 30801825
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||| |||||||||||||||||||| || |||||  ||||||| ||| | |||||||||||| | ||||||||||||||  |||||||||    
T  30801714 agagaagatgagaggaaagagaaaatgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagg 30801813  T
Q  101 gtgtctatgtat 112  Q
    ||||||||||||    
T  30801814 gtgtctatgtat 30801825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 20764896 - 20765005
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||||||||||||| ||||||||| ||| ||||| ||| | |||||| |||||||||||||| ||| |||| ||||||| ||||||||||    
T  20764896 agagaagatgagagaaaagagaaagtgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagg 20764995  T
Q  101 gtgtctatgt 110  Q
     |||||||||    
T  20764996 atgtctatgt 20765005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 24699935 - 24700055
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||||||||| |||| |||| | | ||||||||| | |||||  |||||||| ||||| ||||||| |||||||||||| ||||||    
T  24699935 agagaagaggagaggaaagagaaagtgtgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaagg 24700034  T
Q  101 gtgtctatgtatgattactct 121  Q
     ||||||||||| ||||||||    
T  24700035 atgtctatgtatcattactct 24700055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 48375687 - 48375795
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||  || |||||||||| ||||| |  | |||||||||| |||||||||    
T  48375687 agagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaagg 48375786  T
Q  101 gtgtctatg 109  Q
    |||||||||    
T  48375787 gtgtctatg 48375795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 47531984 - 47531873
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||| ||||||||||||||||| ||||||||||||| || ||  || | |||||| ||||| |||||||||||| ||| |||||||||||| ||||||    
T  47531984 agagaataggagagaaaagagaaagtgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaagg 47531885  T
Q  101 gtgtctatgtat 112  Q
     |||||||||||    
T  47531884 atgtctatgtat 47531873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 51419341 - 51419452
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||| ||||||||||||||||| ||||||||||||| ||| | ||| | |||||| |||||||||||||| ||| ||||| ||||||| || ||||||    
T  51419341 agagaataggagagaaaagagaaagtgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaagg 51419440  T
Q  101 gtgtctatgtat 112  Q
     |||||||||||    
T  51419441 atgtctatgtat 51419452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 14623820 - 14623939
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| |||||||||| |  |||||| |||  || ||| |||||||| ||||| |||||| ||||||||||||||||||||    
T  14623820 agagaagagaagatgaaagagaaagtgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaagg 14623919  T
Q  101 gtgtctatgtatgattactc 120  Q
     ||||||||||| |||||||    
T  14623920 atgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 41080826 - 41080709
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||  |||||||||||||||||||| || |||||| |||| || | | ||||||||| |||| ||||||||||||| |||| | ||||||    
T  41080826 agagaagaggagatgaaagagaaaatgtgcttgtgtgg-gtccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgcta-ctaagg 41080729  T
Q  101 gtgtctatgtatgattactc 120  Q
     ||||||||||| |||||||    
T  41080728 atgtctatgtatcattactc 41080709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 13898036 - 13898154
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| |||||||||| |  |||||| |||  |||||| |||||||| ||||| |||||| ||||||||||||||||||||    
T  13898036 agagaagagaagatgaaagagaaagtgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaagg 13898135  T
Q  101 gtgtctatgtatgattact 119  Q
     ||| ||| ||| ||||||    
T  13898136 atgtttatctatcattact 13898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 1758437 - 1758561
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaa--agggtgtattgccacctaa 98  Q
    |||||||||||||  |||||||||||||| ||||| ||||||||||| || |  ||| |||||||||||||| ||||||   ||||||||||| |||||     
T  1758437 agagaagaggagatgaaagagaaaatgtgtttgtgtggagtccacgtaaccatatgtcagatttttgtgtgggtgtcaaggggggtgtattgcaacctat 1758536  T
Q  99 gggtgtctatgtatgattactctta 123  Q
    || || |||||||| || |||||||    
T  1758537 ggttgactatgtatcataactctta 1758561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 35536745 - 35536625
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  |||||| || ||||||||||    |||||| |||| |||||| | |||||| ||||| ||||||| ||||||||||||| |||||    
T  35536745 agagaagagaagatgaaagaggaagtgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataagg 35536646  T
Q  101 gtgtctatgtatgattactct 121  Q
     ||||||||||| ||||||||    
T  35536645 atgtctatgtatcattactct 35536625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 8956881 - 8956761
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  |||||| || ||||||||||    |||||| |||  |||||| | |||||| ||||| ||||||||| ||||||||||| |||||    
T  8956881 agagaagagaagatgaaagaggaagtgtgcttgtgtaaggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataagg 8956782  T
Q  101 gtgtctatgtatgattactct 121  Q
     ||||||||||| ||||||||    
T  8956781 atgtctatgtatcattactct 8956761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 35093688 - 35093593
Alignment:
Q  17 aagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtat 112  Q
    |||||||| |||||||||  ||||| ||| |||| || ||| ||||||||| |||||||||||| | ||||||| ||||||| | |||||||||||    
T  35093688 aagagaaagtgtgcttgtatggagttcacatgaccacatgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtat 35093593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 36331417 - 36331479
Alignment:
Q  59 agatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatgattactct 121  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||| ||||||| || |||||    
T  36331417 agatttttgtgtggatgtcaaggggtgcattgccatctaagggtgtttatgtatcataactct 36331479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 36331310 - 36331407
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaa 98  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  || | || ||| |||||||||||||| |||||| ||||| ||||||||||||    
T  36331310 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 39670130 - 39670019
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||||||||||||||| || ||||| ||| ||  |||||| |||  |||||| | |||||| | | |||||||| || | ||||||||| |||||    
T  39670130 agagaagaggagagaaaagaggaagtgtgcgtgtacgaggtccacatgatcacgtgtcaaatttttatatagatgtcaagggatatattgccacataagg 39670031  T
Q  101 gtgtctatgtat 112  Q
     |||||||||||    
T  39670030 atgtctatgtat 39670019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 45058534 - 45058644
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| | | ||||||||| |||||  ||   || ||| |||||||| ||||| |||||| ||||||||||||||||||||    
T  45058534 agagaagagaagaagaaagagaaagtatacttgtgcggggtccatatggtcacatgtcagatttttatgtgggtgtcaa-gggtgtattgccacctaagg 45058632  T
Q  101 gtgtctatgtat 112  Q
    |||| |||||||    
T  45058633 gtgtttatgtat 45058644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 25407128 - 25407245
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagattttt-gtgtggatgtcaaagggtgtattgccacctaag 99  Q
    |||||||||||||  ||||||||| |||| ||||| ||  ||||  |||  |||||| |||||||| |||||  |||||| |||| |||||||||||| |    
T  25407128 agagaagaggagatgaaagagaaagtgtgtttgtgtgggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatg 25407227  T
Q  100 ggtgtctatgtatgatta 117  Q
    | ||| ||||||| ||||    
T  25407228 gttgtgtatgtatcatta 25407245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 45320489 - 45320385
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||  ||| |||||||||  ||||| | ||||||| | ||||||| | |||||||||||||  ||| || | |||||||| ||| |||||    
T  45320489 agagaagaggagatgaaaaagaaaatgtatttgtgtgaagtccacataactacgtatcagatttttgtgtgagtgttaatgagtgtattgtcacttaagg 45320390  T
Q  101 gtgtc 105  Q
     ||||    
T  45320389 ttgtc 45320385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 7e-49; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 9058599 - 9058477
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  9058599 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 9058500  T
Q  101 gtgtctatgtatgattactctta 123  Q
    |||||||||||| ||||||||||    
T  9058499 gtgtctatgtatcattactctta 9058477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 33436081 - 33436202
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  33436081 agagaagatgagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 33436180  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||||||||||| |||||||||    
T  33436181 gtgtctatgtatcattactctt 33436202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 19930801 - 19930917
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| |||| |||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19930801 agagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagg 19930900  T
Q  101 gtgtctatgtatgatta 117  Q
    |||||||||||| ||||    
T  19930901 gtgtctatgtatcatta 19930917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 28863574 - 28863458
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  28863574 agagaagaggagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 28863475  T
Q  101 gtgtctatgtatgatta 117  Q
    |||||||||||| ||||    
T  28863474 gtgtctatgtatcatta 28863458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 13438462 - 13438343
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||| ||||||| |||||||||    
T  13438462 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagg 13438363  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  13438362 gtgtctatgtatcattactc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 17473139 - 17473020
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||    
T  17473139 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagg 17473040  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  17473039 gtgtctatgtatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 10249367 - 10249485
Alignment:
Q  5 aagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgt 104  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| ||||||| ||||||||| |||||||||||||    
T  10249367 aagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgt 10249466  T
Q  105 ctatgtatgattactctta 123  Q
    |||||||| ||||||||||    
T  10249467 ctatgtatcattactctta 10249485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 28381636 - 28381760
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||| |||| || |||||||||||||||||||    
T  28381636 agagaagatgagagaaaagagaaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagg 28381735  T
Q  101 gtgtctatgtatgattactcttaaa 125  Q
    |||||||||||| ||||||| ||||    
T  28381736 gtgtctatgtatcattactcataaa 28381760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 32505629 - 32505749
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| |||||||||||||| ||||||| ||||||||| |||||||||    
T  32505629 agagaagaggagagaaaatagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagg 32505728  T
Q  101 gtgtctatgtatgattactct 121  Q
    |||||||||||| ||||||||    
T  32505729 gtgtctatgtatcattactct 32505749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 30915582 - 30915461
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||| |||||||| |||||  ||||||||||||||||||||||||||    
T  30915582 agagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagg 30915483  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||||||||||| |||||||||    
T  30915482 gtgtctatgtatcattactctt 30915461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 7465716 - 7465836
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| |||| |||||||||| |||||||||| || |||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||    
T  7465716 agagaagaagagataaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagg 7465815  T
Q  101 gtgtctatgtatgattactct 121  Q
    |||||||||||| ||||||||    
T  7465816 gtgtctatgtatcattactct 7465836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 40701597 - 40701478
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||||||||||||| |||| |||||||| |||||||| ||||||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  40701597 agagaagatgagagaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagg 40701498  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  40701497 gtgtctatgtatcattactc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 5574479 - 5574589
Alignment:
Q  11 agagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgt 110  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  5574479 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgt 5574578  T
Q  111 atgattactct 121  Q
    || ||||||||    
T  5574579 atcattactct 5574589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 20700934 - 20700813
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||||||||| ||||||| ||||| |||||||||||||||||| |||||||||||| |  |||||||||||||||||||| |||||    
T  20700934 agagaagaggagaggaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataagg 20700835  T
Q  101 gtgtctatgtatgattactctt 122  Q
     ||||||||||| |||||||||    
T  20700834 atgtctatgtatcattactctt 20700813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 27864808 - 27864704
Alignment:
Q  16 aaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatgat 115  Q
    ||||||||| ||||||| ||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  27864808 aaagagaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 27864709  T
Q  116 tactc 120  Q
    |||||    
T  27864708 tactc 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 4060804 - 4060685
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||||||| ||||| ||||||| |||||  ||||||| ||||||||| |||||||||||||||||||||| ||||||||| |||||||||    
T  4060804 agagaagatgagagaaaaaagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagg 4060705  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  4060704 gtgtctatgtatcattactc 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 40613885 - 40613994
Alignment:
Q  3 agaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggt 102  Q
    |||| ||||||||||||||||| ||||||||||||| ||||| ||| | |||||| |||||||||||||| ||||||||||||||||||||||||||| |    
T  40613885 agaataggagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggat 40613984  T
Q  103 gtctatgtat 112  Q
    ||||||||||    
T  40613985 gtctatgtat 40613994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 38882802 - 38882915
Alignment:
Q  11 agagaaaagagaaaatgtgcttgtgcggag---tccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtcta 107  Q
    |||||||||||||| || |||||||||| |   ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38882802 agagaaaagagaaagtgcgcttgtgcgggggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtcta 38882900  T
Q  108 tgtatgattactctt 122  Q
    ||||| |||||||||    
T  38882901 tgtatcattactctt 38882915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 26891485 - 26891606
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||| ||||||||||||||||||| ||  ||||||||||| || ||| |||||||||||||| |||| | ||||||||||||||||||||    
T  26891485 agagaagagaagaggaaagagaaaatgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagg 26891584  T
Q  101 gtgtctatgtatgattactctt 122  Q
    ||| |||||||| || ||||||    
T  26891585 gtggctatgtatcataactctt 26891606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 38273123 - 38273244
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||| ||||||||||||||||| |||||| |||||| ||||| ||| |||||||| |||||||||||||| ||| |||||||||||||||| |||||     
T  38273123 agagaataggagagaaaagagaaagtgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaaga 38273222  T
Q  101 gtgtctatgtatgattactctt 122  Q
     ||||||||||| || ||||||    
T  38273223 atgtctatgtatcataactctt 38273244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 3440098 - 3439987
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| |  || ||| |||||||||||||| |||| | | ||||||||||||||||||    
T  3440098 agagaagaggagaggaaagagaaaatgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagg 3439999  T
Q  101 gtgtctatgtat 112  Q
    ||||||| ||||    
T  3439998 gtgtctacgtat 3439987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 42257310 - 42257191
Alignment:
Q  3 agaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggt 102  Q
    |||||||||||||||||||||| ||||||||||||| ||||| ||| | |||||| |||||||| ||||| ||||||| | ||||||||||||||| | |    
T  42257310 agaagaggagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagat 42257211  T
Q  103 gtctatgtatgattactctt 122  Q
    |||||||||| || ||||||    
T  42257210 gtctatgtatcataactctt 42257191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 2533242 - 2533123
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||||||| |||||| ||| ||||||||||||| ||| | ||| |||||||| |||||||||||||| ||||||||| ||||||||||| |||||    
T  2533242 agagaagaggagataaaagaaaaagtgtgcttgtgcggggtctatgtggctacgtgtcagatttttgtgtgg-tgtcaaaggatgtattgccacttaagg 2533144  T
Q  101 gtgtctatgtatgattactct 121  Q
     ||||||||||| || |||||    
T  2533143 atgtctatgtatcataactct 2533123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 33436330 - 33436210
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||||| || ||||||||| |||||||||||  ||||||| ||   |||||| |||||||| ||||| ||||||| |||||||||||| ||||||    
T  33436330 agagaagaggataggaaagagaaagtgtgcttgtgcaaagtccacatggtcacgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaagg 33436231  T
Q  101 gtgtctatgtatgattactct 121  Q
     ||||||||||| ||||||||    
T  33436230 atgtctatgtatcattactct 33436210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 17819985 - 17820096
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||  |||||||||||||| ||||| || |||||||| || || ||| |||||||||||||| |||||| |||||||||||||||||  |    
T  17819985 agagaagaggagatgaaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatag 17820084  T
Q  101 gtgtctatgtat 112  Q
     |||||||||||    
T  17820085 ttgtctatgtat 17820096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 41575257 - 41575138
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgc-ggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaag 99  Q
    |||||||||||||  ||||||||| ||||||||||  || |||||| |||| || ||| | ||||||||||| ||||||||||||||||| ||| |||||    
T  41575257 agagaagaggagatgaaagagaaagtgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaag 41575158  T
Q  100 ggtgtctatgtatgattact 119  Q
    | ||||||||||| ||||||    
T  41575157 gatgtctatgtatcattact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 36168955 - 36168835
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||| ||||||||||||||||| | ||||||||||| ||||| ||| | |||||| | ||||||||||||  || ||||| ||||||| || ||||||    
T  36168955 agagaataggagagaaaagagaaagtatgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaagg 36168856  T
Q  101 gtgtctatgtatgattactct 121  Q
     ||||||||||| || |||||    
T  36168855 atgtctatgtatcataactct 36168835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2997468 - 2997569
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  || | || ||| |||||||||||||| |||||| ||||||||||||||||||||    
T  2997468 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 2997567  T
Q  101 gt 102  Q
    ||    
T  2997568 gt 2997569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 38732473 - 38732362
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  |||| || ||| |||||||||||||| |||||| || ||||||| ||| |||||    
T  38732473 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagg 38732374  T
Q  101 gtgtctatgtat 112  Q
    |||| |||||||    
T  38732373 gtgtttatgtat 38732362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 43490240 - 43490129
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||| ||| ||| ||||||||| |||||  || | || ||| |||||||||||||| |||||| |||||||||| |||||||||    
T  43490240 agagaagagaagaagaaagataaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagg 43490141  T
Q  101 gtgtctatgtat 112  Q
    |||| |||||||    
T  43490140 gtgtttatgtat 43490129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 3738060 - 3737986
Alignment:
Q  3 agaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtc 77  Q
    |||||||||||| ||| ||||||||||||||||||| |||||| |||| || ||| |||||||||||||| ||||    
T  3738060 agaagaggagaggaaaaagaaaatgtgcttgtgcggggtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 45097716 - 45097837
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  || | || ||| |||||||||| ||| |||||| || |||||||||||||||||    
T  45097716 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaagg 45097815  T
Q  101 gtgtctatgtatgattactctt 122  Q
     ||| ||||||| || ||||||    
T  45097816 atgtttatgtatcataactctt 45097837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 13365472 - 13365369
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  ||   || ||| |||||||||||||| |||||| |||| |||||||| ||||||    
T  13365472 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagg 13365373  T
Q  101 gtgt 104  Q
    ||||    
T  13365372 gtgt 13365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 17823853 - 17823779
Alignment:
Q  51 tacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatgattactcttaaa 125  Q
    ||||||| |||||||||||||| |||  | |  ||||||||||||||||| ||| ||||||| ||||||||||||    
T  17823853 tacgtgtcagatttttgtgtgggtgttcaggaatgtattgccacctaaggatgtatatgtatcattactcttaaa 17823779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 3e-48; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 2582034 - 2581913
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  2582034 agagaagaggagagaaaaaagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 2581935  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||||||||||| |||||||||    
T  2581934 gtgtctatgtatcattactctt 2581913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 9474857 - 9474976
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| |||| |||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  9474857 agagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 9474956  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  9474957 gtgtctatgtatcattactc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 38632302 - 38632423
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||    
T  38632302 agagaagaggagagaaaagaaaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagg 38632401  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||||||||||| |||||||||    
T  38632402 gtgtctatgtatcattactctt 38632423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 47452301 - 47452420
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||    
T  47452301 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagg 47452400  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  47452401 gtgtctatgtatcattactc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 48716263 - 48716382
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||||| |||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  48716263 agagaagaggaaagaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagg 48716362  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  48716363 gtgtctatgtatcattactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 3000438 - 3000319
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  3000438 agagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 3000339  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||| ||||||| |||||||    
T  3000338 gtgtttatgtatcattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 27564716 - 27564835
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  27564716 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagg 27564815  T
Q  101 gtgtctatgtatgattactc 120  Q
     ||||||||||| |||||||    
T  27564816 atgtctatgtatcattactc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 38595273 - 38595152
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |    
T  38595273 agagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaag 38595174  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||| ||||||| |||||||||    
T  38595173 gtgtttatgtatcattactctt 38595152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 50630577 - 50630457
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| |  |||||| |||||||||||||||||    
T  50630577 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagg 50630478  T
Q  101 gtgtctatgtatgattactct 121  Q
    || ||||||||| ||||||||    
T  50630477 gtatctatgtatcattactct 50630457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 170 - 304
Target Start/End: Original strand, 19915452 - 19915577
Alignment:
Q  170 aaaaaacattgattcaggaattttttggagtcaaggatacagaacgcattagctgcaatttagaaaaatttacaataaagaatacagaactattacacta 269  Q
    ||||||||||||||||| |||||||| ||||||| |||||||||         |||||||||||||||||||||| ||||||||||||||||||||||||    
T  19915452 aaaaaacattgattcagaaattttttagagtcaaagatacagaa---------tgcaatttagaaaaatttacaacaaagaatacagaactattacacta 19915542  T
Q  270 ttacagagactcctagtgaggtgtcaaggattcaa 304  Q
    |||||||||| ||||||||||||||||||||||||    
T  19915543 ttacagagacacctagtgaggtgtcaaggattcaa 19915577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 8346373 - 8346490
Alignment:
Q  5 aagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgt 104  Q
    |||||||||||||||||||| ||||||||||| | |||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||| ||||     
T  8346373 aagaggagagaaaagagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtga 8346472  T
Q  105 ctatgtatgattactctt 122  Q
    |||||||| |||||||||    
T  8346473 ctatgtatcattactctt 8346490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 32813366 - 32813245
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| ||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  32813366 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaagg 32813267  T
Q  101 gtgtctatgtatgattactctt 122  Q
     ||||||||||| || ||||||    
T  32813266 atgtctatgtatcataactctt 32813245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 41758924 - 41758804
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| |||| |||||||| ||||| |||||||||||| |||||||||||||| ||||||||||||||||||||  ||| |    
T  41758924 agagaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatg 41758825  T
Q  101 gtgtctatgtatgattactct 121  Q
    |||||||||||| ||||||||    
T  41758824 gtgtctatgtatcattactct 41758804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 51898664 - 51898784
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||| ||||| |||||||||||||  ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |    
T  51898664 agagaagaggagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaag 51898763  T
Q  101 gtgtctatgtatgattactct 121  Q
     ||||||||||| ||||||||    
T  51898764 atgtctatgtatcattactct 51898784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 43251 - 43132
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||| | ||||||     
T  43251 agagaggaggagagaaaagagaaagtgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaaga 43152  T
Q  101 gtgtctatgtatgattactc 120  Q
     ||||||||||| |||||||    
T  43151 ctgtctatgtatcattactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 44548357 - 44548473
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| | ||||| ||||||||||||||||| |    
T  44548357 agagaagaagagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaag 44548456  T
Q  101 gtgtctatgtatgatta 117  Q
     ||||||||||| ||||    
T  44548457 atgtctatgtatcatta 44548473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 37649317 - 37649198
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||||||||||||| |||| |||||||||||||| | |||||||| |||||| |||||||||||||| |||||||| |||||||||||||||| |    
T  37649317 agagaagaggagagaaaagggaaagtgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaag 37649218  T
Q  101 gtgtctatgtatgattactc 120  Q
     ||||||||||| |||||||    
T  37649217 atgtctatgtatcattactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 49811508 - 49811630
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| |  || |||||||| |||||||||||||||||||||| ||||||||| |||||||||    
T  49811508 agagaagaggagagaaaagagaaagtgtgcttgtgcggagtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaagg 49811607  T
Q  101 gtgtctatgtatgattactctta 123  Q
     ||||||| ||| || |||||||    
T  49811608 atgtctatctatcataactctta 49811630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 11152359 - 11152476
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||| |||||  |||||||||||| ||| || ||||||||||| ||||||||||||||||||| |||||||||||||||||||| |    
T  11152359 agagaagaggagaggaaaaagaaagcgtgcttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaa-g 11152457  T
Q  101 gtgtctatgtatgattact 119  Q
    |||||||||| | ||||||    
T  11152458 gtgtctatgtttcattact 11152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 13414880 - 13414791
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattg 90  Q
    |||||||| || ||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  13414880 agagaagatgatagaaaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 45044541 - 45044665
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||| ||| |||| ||| |||||||||| ||| ||||||| |||||||||||||||||||    
T  45044541 agagaagagaagagaaaagagaaaatgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaagg 45044640  T
Q  101 gtgtctatgtatgattactcttaaa 125  Q
       | ||||||| || |||||||||    
T  45044641 aaatgtatgtatcataactcttaaa 45044665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 26274542 - 26274429
Alignment:
Q  10 gagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatg 109  Q
    ||||||||||| ||| ||| ||||||| |  |||||||||||| |||| |||||||| ||||||||||||| | ||||||||||| ||||||||||||||    
T  26274542 gagagaaaagaaaaagtgtacttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatg 26274443  T
Q  110 tatgattactctta 123  Q
    ||| |||| |||||    
T  26274442 tatcattattctta 26274429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 48489419 - 48489328
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgcca 93  Q
    |||||||||| ||||||| |||||||||||||||||||  |||||||||| || ||| |||||||||||||||||||  ||||||||||||||    
T  48489419 agagaagaggtgagaaaatagaaaatgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtc-cagggtgtattgcca 48489328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 50590981 - 50591092
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  || | || ||| |||||||||||||| |||||| ||||||||||||||||||||    
T  50590981 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 50591080  T
Q  101 gtgtctatgtat 112  Q
    |||| |||||||    
T  50591081 gtgtttatgtat 50591092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 5958981 - 5959102
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  |||| || ||| |||||||||||||| ||||||  ||||||||||||| |||||    
T  5958981 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagg 5959080  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||| ||||||| || ||||||    
T  5959081 gtgtttatgtatcataactctt 5959102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 23597072 - 23597193
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||| ||||||||||||| ||| |||| ||||||   ||| ||||| | |||||| |||||||| ||||| | |||||| |||||||||||||||| |    
T  23597072 agagaataggagagaaaagataaagtgtgtttgtgcaaggtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatg 23597171  T
Q  101 gtgtctatgtatgattactctt 122  Q
     ||||||||||| |||||||||    
T  23597172 atgtctatgtatcattactctt 23597193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 26440844 - 26440746
Alignment:
Q  10 gagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctat 108  Q
    ||||||||||||||| ||||||| |||||  |||| ||| | |||||| |||||||||||||| ||| ||||||||||||| || |||||| |||||||    
T  26440844 gagagaaaagagaaagtgtgcttatgcgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctat 26440746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 6260989 - 6260890
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||  ||| ||||||||||||| ||||| ||||||||||| || ||| |||||||| ||||| |||  | ||||||||| ||||||||||    
T  6260989 agagaagaggagaagaaatagaaaatgtgcttatgcggggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccacctaagg 6260890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 37926419 - 37926539
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||||||||||||| ||| ||||| |||  |||| ||| | |||||| |||||||| ||||| ||| ||| | ||||||||||||||| |    
T  37926419 agagaagagaagagaaaagagaaagtgtacttgtacgggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaag 37926518  T
Q  101 gtgtctatgtatgattactct 121  Q
     | ||||||||| || |||||    
T  37926519 atatctatgtatcataactct 37926539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 41608474 - 41608585
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||| ||| |||||  || | || ||| |||||||||||||  |||||| ||||||||||||||||||||    
T  41608474 agagaagagaagaagaaagagaaagtgtacttgtacggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagg 41608573  T
Q  101 gtgtctatgtat 112  Q
     ||| |||||||    
T  41608574 atgtttatgtat 41608585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 44454098 - 44453987
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||| ||||| ||| |||||||||| ||  ||||||| || || ||| |||||||||||||| | ||||  | ||||||||||| ||| |    
T  44454098 agagaagatgagaggaaagaaaaagtgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaag 44453999  T
Q  101 gtgtctatgtat 112  Q
    ||||||||||||    
T  44453998 gtgtctatgtat 44453987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 19914343 - 19914400
Alignment:
Q  121 ttaaattctagatggg-ctacaaggaatcgattgttaaagacctccctctaaaaaacat 178  Q
    |||||||||||||||| ||| |||||||| ||||||||| |||||||||||||||||||    
T  19914343 ttaaattctagatggggctagaaggaatcaattgttaaa-acctccctctaaaaaacat 19914400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 3302514 - 3302639
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||  ||| ||||| |||||||||  || |||||  ||| ||||||| |||||||||||||| |||| | |  | ||||| |||||||||    
T  3302514 agagaagatgagatgaaaaagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcacctaagg 3302613  T
Q  101 gtgtctatgtatgattactcttaaat 126  Q
     ||| ||||||| ||||||| |||||    
T  3302614 atgtatatgtatcattactcataaat 3302639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 44334176 - 44334245
Alignment:
Q  26 tgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacc 95  Q
    |||| |||||| | ||||| |||||||||||| || |||||||||||||||||| | ||||||| |||||    
T  44334176 tgtgtttgtgctgggtccatgtgactacgtgtcaggtttttgtgtggatgtcaatgtgtgtattaccacc 44334245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 1e-47; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 32869797 - 32869673
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  32869797 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 32869698  T
Q  101 gtgtctatgtatgattactcttaaa 125  Q
    ||||||||||||  |||||| ||||    
T  32869697 gtgtctatgtatctttactcataaa 32869673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22880639 - 22880755
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||    
T  22880639 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagg 22880738  T
Q  101 gtgtctatgtatgatta 117  Q
    |||||||||||| ||||    
T  22880739 gtgtctatgtatcatta 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 17598673 - 17598554
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||| |||||||||||||| ||||||| | |||||||||||||||||    
T  17598673 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagg 17598574  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  17598573 gtgtctatgtatcattactc 17598554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 11427737 - 11427615
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccaccta--a 98  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||  |    
T  11427737 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaaga 11427638  T
Q  99 gggtgtctatgtatgattactct 121  Q
    |||||||||||||| ||||||||    
T  11427637 gggtgtctatgtatcattactct 11427615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 6209446 - 6209567
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| |||||| |||||| |||||||||||||||||  |||||||||||||  |||||||  ||||||||||||||||||    
T  6209446 agagaagaggagagaaaagagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagg 6209545  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||||||||||| |||||||||    
T  6209546 gtgtctatgtatcattactctt 6209567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 31109385 - 31109488
Alignment:
Q  5 aagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgt 104  Q
    |||||||||||||||||||| ||| ||| ||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31109385 aagaggagagaaaagagaaagtgtacttttgcggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgt 31109484  T
Q  105 ctat 108  Q
    ||||    
T  31109485 ctat 31109488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 31976367 - 31976247
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| || || ||||| |||||| |||||||||||||| ||| ||||||| |||||||||||||||    
T  31976367 agagaagaggagagaaaagagaaagtgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaagg 31976268  T
Q  101 gtgtctatgtatgattactct 121  Q
     ||||||||||| || |||||    
T  31976267 atgtctatgtatcataactct 31976247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 29857946 - 29857827
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||||||||||||| ||||||| |||||  ||||||| ||||||||| |||||||||||||| ||| ||| |||||||||||| |||| |    
T  29857946 agagaagagaagagaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaag 29857847  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  29857846 gtgtctatgtatcattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 31110742 - 31110861
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||||||||||||| ||||||||||| | ||||| |||  ||||||| ||||||||||| |  |||||||||||||||||||||||||||    
T  31110742 agagaagagtagagaaaagagaaagtgtgcttgtgcagggtccatgtggttacgtgtcagatttttgtgag--tgtcaaagggtgtattgccacctaagg 31110839  T
Q  101 gtgtctatgtatgattactctt 122  Q
     ||||||||||| || ||||||    
T  31110840 atgtctatgtatcataactctt 31110861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 23128112 - 23128229
Alignment:
Q  5 aagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgt 104  Q
    |||||||||||||||||||| |||||||||| ||  ||||||||||||||||| |||||||||||||| ||||||||| ||||||  ||| ||| |||||    
T  23128112 aagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgt 23128211  T
Q  105 ctatgtatgattactctt 122  Q
    |||| ||| |||| ||||    
T  23128212 ctatatatcattattctt 23128229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 15832694 - 15832575
Alignment:
Q  3 agaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggt 102  Q
    ||||||||||| ||||||||||||||  |||||| |  ||||||||||||||||| | |||||||||||| ||||||| | | ||||| ||||||| |||    
T  15832694 agaagaggagaaaaaagagaaaatgtatttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggt 15832595  T
Q  103 gtctatgtatgattactctt 122  Q
    |||||||||| |||||||||    
T  15832594 gtctatgtatcattactctt 15832575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 15990023 - 15990145
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  || | || ||| |||||||||||||| |||||| ||||||||||||||||||||    
T  15990023 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 15990122  T
Q  101 gtgtctatgtatgattactctta 123  Q
    |||| ||||||| || |||||||    
T  15990123 gtgtttatgtatcataactctta 15990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 30341341 - 30341462
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  || | || ||| |||||||||||||| |||||| ||||||||||||||||||||    
T  30341341 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 30341440  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||| ||||||| || ||||||    
T  30341441 gtgtttatgtatcataactctt 30341462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 946495 - 946384
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| |||||| | ||||  |  ||||||||| |||| ||||||||| || | ||||||||||||||||  |||||||||    
T  946495 agagaagaggagagaaaagagaaagtgtgctagagcgggatttacgtgactaggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaagg 946396  T
Q  101 gtgtctatgtat 112  Q
     |||||||||||    
T  946395 atgtctatgtat 946384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 15508005 - 15508116
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  || | || ||| |||||||||||||| |||||| ||||||||||||||||||||    
T  15508005 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 15508104  T
Q  101 gtgtctatgtat 112  Q
    |||| |||||||    
T  15508105 gtgtttatgtat 15508116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 28536472 - 28536578
Alignment:
Q  4 gaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtg 103  Q
    |||||| ||| |||||||||| |||||||||| || |||||| ||||  ||||| |||||||||||||| |||||| || ||||||||||||||||| ||    
T  28536472 gaagagaagataaaagagaaagtgtgcttgtgtggggtccacatgac--cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatg 28536569  T
Q  104 tctatgtat 112  Q
    | |||||||    
T  28536570 tttatgtat 28536578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 31953011 - 31953130
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| |||| ||||| |  |||||| |||  || ||| |||||||| ||||| |||||| ||||||||||||||||||||    
T  31953011 agagaagagaagatgaaagagaaagtgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaagg 31953110  T
Q  101 gtgtctatgtatgattactc 120  Q
     ||||||| ||| |||||||    
T  31953111 atgtctatctatcattactc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 4231667 - 4231570
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaa 98  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  || | |||||| |||||||||||||| || ||| ||||||||||||||||||    
T  4231667 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaa 4231570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 12732601 - 12732480
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||  ||||||||||||||||| || ||  ||||| |  | |||||| |||||||||||||| |||||| |  | ||||||||| ||||     
T  12732601 agagaagaggagatgaaagagaaaatgtgcttatgtgggatccacatagccacgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaaga 12732502  T
Q  101 gtgtctatgtatgattactctt 122  Q
     ||||||||||| |||||||||    
T  12732501 atgtctatgtatcattactctt 12732480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30870133 - 30870068
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagattttt 66  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| ||||| || ||| ||||||||    
T  30870133 agagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgttagattttt 30870068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 9379708 - 9379804
Alignment:
Q  16 aaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtat 112  Q
    |||||||||||||| ||||| |   ||||| || | |||||| | |||||||| ||| |||||| || ||||||| || |||||| |||||||||||    
T  9379708 aaagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtctatgtat 9379804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 4e-47; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 12831166 - 12831047
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||    
T  12831166 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagg 12831067  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  12831066 gtgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 40423924 - 40424043
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40423924 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagg 40424023  T
Q  101 gtgtctatgtatgattactc 120  Q
    || ||||||||| |||||||    
T  40424024 gtatctatgtatcattactc 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 14548041 - 14547919
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  14548041 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagg 14547942  T
Q  101 gtgtctatgtatgattactctta 123  Q
    ||||||||||||  |||||||||    
T  14547941 gtgtctatgtatctttactctta 14547919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 1179921 - 1180040
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||||| ||||||||||    
T  1179921 agagaagaggagagaaaagagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagg 1180020  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  1180021 gtgtctatgtatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 15197448 - 15197333
Alignment:
Q  5 aagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgt 104  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||    
T  15197448 aagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgt 15197349  T
Q  105 ctatgtatgattactc 120  Q
    |||||||| |||||||    
T  15197348 ctatgtatcattactc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 34012277 - 34012401
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||||| | |||||||||||| |||||||||||||||| ||||||||||    
T  34012277 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagg 34012376  T
Q  101 gtgtctatgtatgattactcttaaa 125  Q
    |||||||||||| ||||||| ||||    
T  34012377 gtgtctatgtatcattactcataaa 34012401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 504102 - 504221
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||||||||||||  ||||||||||||| |||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  504102 agagaagatgagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagg 504201  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  504202 gtgtctatgtatcattactc 504221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 23122578 - 23122697
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||||| |||||||||||||| ||||||| ||||||||||||| |||||    
T  23122578 agagaacaggagagaaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagg 23122677  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  23122678 gtgtctatgtatcattactc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 37038598 - 37038478
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||| ||||| |||||||||||||  ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |    
T  37038598 agagaagaggagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaag 37038499  T
Q  101 gtgtctatgtatgattactct 121  Q
     ||||||||||| ||||||||    
T  37038498 atgtctatgtatcattactct 37038478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 5957949 - 5957831
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||||||||| |||| ||||||||  ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||     
T  5957949 agagaagaggagaggaaagagaaagtgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaga 5957850  T
Q  101 gtgtctatgtatgattact 119  Q
     ||||||||||| ||||||    
T  5957849 atgtctatgtatcattact 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 8841413 - 8841513
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||    
T  8841413 agagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagg 8841512  T
Q  101 g 101  Q
    |    
T  8841513 g 8841513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 44507068 - 44507188
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||||||||||||| | ||||||| ||| |||||||||||||||||| |||||||||||||| ||| |||| ||||||| ||||||||||    
T  44507068 agagaagatgagagaaaagagaaagtatgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagg 44507167  T
Q  101 gtgtctatgtatgattactct 121  Q
    |||||||||||| ||||||||    
T  44507168 gtgtctatgtatcattactct 44507188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 10621068 - 10621179
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| |||||||||||||  || | ||| |||||||| |||||||||||||| |||||||||||||||| ||||||||||    
T  10621068 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagg 10621167  T
Q  101 gtgtctatgtat 112  Q
     |||||||||||    
T  10621168 atgtctatgtat 10621179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 43414562 - 43414673
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| |||||||||||||  |||| ||||| |||||| |||||||||||||| ||||||||||||| |||||| ||||||    
T  43414562 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaagg 43414661  T
Q  101 gtgtctatgtat 112  Q
     |||||||||||    
T  43414662 atgtctatgtat 43414673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 10284612 - 10284733
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| || || ||||||||| ||||||||||||| |||||||||||||||||| | |||||||||||| |||||||| |||||||| ||| |||||    
T  10284612 agagaagatgaaaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagg 10284711  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||||||||||| || ||||||    
T  10284712 gtgtctatgtatcataactctt 10284733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 15048162 - 15048273
Alignment:
Q  1 agagaagaggagagaaaa-gagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaag 99  Q
    ||||||||||||| |||| |||||| ||||||||||||| ||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  15048162 agagaagaggagataaaaagagaaagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgg-tgtcaaagggtgtattgccacctaag 15048260  T
Q  100 ggtgtctatgtat 112  Q
    | |||||||||||    
T  15048261 gatgtctatgtat 15048273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 15258910 - 15259034
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||||||| || ||| |||||||| |||||||||| | || |||||||||| |||||     
T  15258910 agagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaaga 15259009  T
Q  101 gtgtctatgtatgattactcttaaa 125  Q
    || ||||||||| || |||||||||    
T  15259010 gtatctatgtatcataactcttaaa 15259034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 4854844 - 4854966
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||| | ||||| ||| | || | | |||||||| ||| | ||| |||||||||||||||||||||||    
T  4854844 agagaagaggagagaaaagagaaagtgtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaagg 4854943  T
Q  101 gtgtctatgtatgattactctta 123  Q
     ||||||||||| ||||||||||    
T  4854944 atgtctatgtatcattactctta 4854966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 9122304 - 9122196
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||| ||| ||||||||||||          ||||||||||||||||||||    
T  9122304 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgt----------gggtgtattgccacctaagg 9122215  T
Q  101 gtgtctatgtatgattact 119  Q
    |||||||||||| ||||||    
T  9122214 gtgtctatgtatcattact 9122196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 16383496 - 16383375
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  || | || ||| |||||||||||||| |||||| ||||||||||||||||||||    
T  16383496 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 16383397  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||| ||||||| || ||||||    
T  16383396 gtgtttatgtatcataactctt 16383375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 14055612 - 14055684
Alignment:
Q  40 gtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtat 112  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||| |||||||||||||| ||||||    
T  14055612 gtccacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtat 14055684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 34307335 - 34307214
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||| || ||  || | || ||| |||||||||||||| |||||| ||||||||||||||||||||    
T  34307335 agagaagagaagaagaaagagaaagtgtacttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 34307236  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||| ||||||| || ||||||    
T  34307235 gtgtttatgtatcataactctt 34307214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 24307774 - 24307898
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  || | || | | |||||||||||||| |||||| || |||||||||||||||||    
T  24307774 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagg 24307873  T
Q  101 gtgtctatgtatgattactcttaaa 125  Q
    |||| ||||||| || |||||||||    
T  24307874 gtgtttatgtatcataactcttaaa 24307898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 30479455 - 30479566
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||  |||||  |  | || ||| |||||||| |||||||||||||||||||||||||||||||||    
T  30479455 agagaagagaagaagaaagagaaagtgtacttgtgcgaggtccatatagccacatgtcagatttttatgtggatgtcaaagggtgtattgccacctaagg 30479554  T
Q  101 gtgtctatgtat 112  Q
    |||| |||||||    
T  30479555 gtgtttatgtat 30479566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 20074923 - 20075041
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||| ||||||||| ||||||||||| | ||||||||| |        | |||||| ||||| |||||||| ||||||||||||||||||    
T  20074923 agagaagagaagaggaaagagaaagtgtgcttgtgcagggtccacgtgtc--------acatttttatgtgggtgtcaaagagtgtattgccacctaagg 20075014  T
Q  101 gtgtctatgtatgattactcttaaatt 127  Q
     ||||||||||| ||||||| ||||||    
T  20075015 atgtctatgtatcattactcataaatt 20075041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 25838308 - 25838196
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||| ||||| |||||        ||||||||||||||||  ||||||||||||||||||    
T  25838308 agagaagaggagagaaaagaaaaagtgtgcttgtacggagtccatgtgacaacgtg--------ttgtgtggatgtcaaaaagtgtattgccacctaagg 25838217  T
Q  101 gtgtctatgtatgattactct 121  Q
     | ||||| ||| || |||||    
T  25838216 atatctatttatcataactct 25838196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 38229547 - 38229445
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||| ||||||||||||||||||| | || |||||||||| || ||| |||||||||||||| |||| | | | |||||||||||||||     
T  38229547 agagaagagaagaggaaagagaaaatgtgcttgtacagaatccacgtgaccacatgtcagatttttgtgtgggtgtc-aggagcgtattgccacctaaga 38229449  T
Q  101 gtgt 104  Q
    ||||    
T  38229448 gtgt 38229445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 42221634 - 42221513
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||  ||||||||| |||||||||  || |||||  ||| ||||||| |||||||||||||| |||| | |  ||||||| |||||||||    
T  42221634 agagaagatgagatgaaagagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaagg 42221535  T
Q  101 gtgtctatgtatgattactctt 122  Q
     ||| ||||||| |||||||||    
T  42221534 atgtatatgtatcattactctt 42221513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 24307690 - 24307627
Alignment:
Q  59 agatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatgattactctt 122  Q
    |||||||||||||| |||||| || ||||||||||||||||||||| ||||||| || ||||||    
T  24307690 agatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactctt 24307627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 121
Target Start/End: Complemental strand, 32032785 - 32032724
Alignment:
Q  59 agatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatgattactct 121  Q
    ||||||||||||||||||||| || ||||||||||||||||||||| ||||||| || |||||    
T  32032785 agatttttgtgtggatgtcaa-ggatgtattgccacctaagggtgtttatgtatcataactct 32032724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 16056382 - 16056503
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  || | || ||| |||||||||||||| |||||| || ||||||| ||| |||||    
T  16056382 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagg 16056481  T
Q  101 gtgtctatgtatgattactctt 122  Q
     ||| ||||||| || ||||||    
T  16056482 atgtttatgtatcataactctt 16056503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 17443944 - 17443824
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| |||  ||||| || |||||| ||||||| ||| |||||||||||||  ||| ||   |||||||| |||||||||    
T  17443944 agagaagagaagatgaaagagaaagtgtctttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaagg 17443845  T
Q  101 gtgtctatgtatgattactct 121  Q
     ||||||||||| || |||||    
T  17443844 ttgtctatgtatcataactct 17443824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 40467819 - 40467772
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtg 48  Q
    |||||||| ||||| ||||||||| |||||||||||| ||||||||||    
T  40467819 agagaagatgagaggaaagagaaagtgtgcttgtgcgaagtccacgtg 40467772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 7e-46; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 7389501 - 7389384
Alignment:
Q  8 aggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtcta 107  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||    
T  7389501 aggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtcta 7389402  T
Q  108 tgtatgattactcttaaa 125  Q
    ||||| ||||||||||||    
T  7389401 tgtatcattactcttaaa 7389384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 8080364 - 8080485
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||| ||| | |||||||||||||||||||||||||||    
T  8080364 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagg 8080463  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||||||||||| |||||||||    
T  8080464 gtgtctatgtatcattactctt 8080485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 35137652 - 35137533
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| |||| |||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  35137652 agagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 35137553  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||| ||| |||||||    
T  35137552 gtgtctatttatcattactc 35137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 38267159 - 38267040
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||| ||| |||||    
T  38267159 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagg 38267060  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  38267059 gtgtctatgtatcattactc 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 38837336 - 38837215
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||| | |||  ||||||||||||||||||||||    
T  38837336 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagg 38837237  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||||||||||| |||||||||    
T  38837236 gtgtctatgtatcattactctt 38837215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 19329961 - 19329842
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  19329961 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagg 19329862  T
Q  101 gtgtctatgtatgattactc 120  Q
     ||||||||||| |||||||    
T  19329861 atgtctatgtatcattactc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 3784114 - 3783998
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||||| |||||||||||||| ||||||| | |||||||||||||||||    
T  3784114 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagg 3784015  T
Q  101 gtgtctatgtatgatta 117  Q
    |||||||||||| ||||    
T  3784014 gtgtctatgtatcatta 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 32951474 - 32951592
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||| ||||||| || |||||     
T  32951474 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaaga 32951573  T
Q  101 gtgtctatgtatgattact 119  Q
    |||||||||||| ||||||    
T  32951574 gtgtctatgtatcattact 32951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 36361904 - 36362014
Alignment:
Q  11 agagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgt 110  Q
    |||||||||||||| |||||||||| || |||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  36361904 agagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgt 36362003  T
Q  111 atgattactct 121  Q
    || ||||||||    
T  36362004 atcattactct 36362014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 3434672 - 3434561
Alignment:
Q  10 gagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatg 109  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  3434672 gagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatg 3434573  T
Q  110 tatgattactct 121  Q
    ||| ||||||||    
T  3434572 tatcattactct 3434561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 4999495 - 4999614
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||||||| |||||||||| |||| |||||||| |||||||||||||||| | |||||||||||||| ||||||| |||||||||||| ||||||    
T  4999495 agagaagaggagataaaagagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagg 4999594  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  4999595 gtgtctatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 36362135 - 36362025
Alignment:
Q  11 agagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgt 110  Q
    |||||||||||||| |||||||||| || |||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  36362135 agagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgt 36362036  T
Q  111 atgattactct 121  Q
    || ||||||||    
T  36362035 atcattactct 36362025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 40957826 - 40957705
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||||||||||||| ||||||||| |||  ||||||||||||||||| |||||||||||||| | |||||| |||||||||||||||||     
T  40957826 agagaagatgagagaaaagagaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaaga 40957727  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||||||||||| |||||||||    
T  40957726 gtgtctatgtatcattactctt 40957705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 19436172 - 19436289
Alignment:
Q  5 aagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgt 104  Q
    ||||| |||||||||||||| ||||||| |||||  ||||||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||| |||    
T  19436172 aagagaagagaaaagagaaagtgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgt 19436271  T
Q  105 ctatgtatgattactctt 122  Q
    |||||||| |||||||||    
T  19436272 ctatgtatcattactctt 19436289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 3694486 - 3694370
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| |||||||||||||  ||||| ||||||||||| |||||||||||||| ||| ||| ||||||||| |||||||||    
T  3694486 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagg 3694387  T
Q  101 gtgtctatgtatgatta 117  Q
    |||| ||| ||| ||||    
T  3694386 gtgtgtatatatcatta 3694370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 46033782 - 46033902
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||||| |||||||||||||| || ||||| |||||| |||||||| ||||| ||| ||||||||||||||||||||||     
T  46033782 agagaagaggagagaaaagagaaaatatgcttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaaga 46033881  T
Q  101 gtgtctatgtatgattactct 121  Q
     | ||||||||| || |||||    
T  46033882 atatctatgtatcataactct 46033902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 36208292 - 36208170
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||||||| || ||| || ||||||||||| |||||| |  |||||| ||||||||||    
T  36208292 agagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagg 36208193  T
Q  101 gtgtctatgtatgattactctta 123  Q
    |||||||||||| || |||||||    
T  36208192 gtgtctatgtatcataactctta 36208170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 26296763 - 26296643
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||||||||||||||||||||| |||||||||| |||||  || | |||| | |||||||| ||||||||| ||||||| ||||| |||||||||    
T  26296763 agagaagaggagagaaaagagaaaatgcgcttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaagg 26296664  T
Q  101 gtgtctatgtatgattactct 121  Q
     ||||||||||| || |||||    
T  26296663 atgtctatgtatcataactct 26296643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 38044301 - 38044190
Alignment:
Q  16 aaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatgat 115  Q
    ||||||||| ||| ||||||||| |||||  || |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||    
T  38044301 aaagagaaagtgtacttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcat 38044202  T
Q  116 tactcttaaatt 127  Q
     |||||| ||||    
T  38044201 aactcttcaatt 38044190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 8238332 - 8238220
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccaccta-ag 99  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  ||||||| ||| |||||||||||||| |||||||||||||||||||||||| ||    
T  8238332 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacag 8238233  T
Q  100 ggtgtctatgtat 112  Q
    ||||| |||||||    
T  8238232 ggtgtttatgtat 8238220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 21234513 - 21234409
Alignment:
Q  8 aggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtcta 107  Q
    |||||||  |||||||||||||||||||||| || || ||| |||||||| | |||||||||||  ||||||||||||||||| ||||||||| ||||||    
T  21234513 aggagaggtaagagaaaatgtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtcta 21234414  T
Q  108 tgtat 112  Q
    |||||    
T  21234413 tgtat 21234409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 35522995 - 35522884
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||||||||||||| |||||||||||||  ||||  || | |||||| |||||||||||||| ||| ||| ||||||||||||| |||||    
T  35522995 agagaagaagagagaaaagagaaagtgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaagg 35522896  T
Q  101 gtgtctatgtat 112  Q
     |||||||||||    
T  35522895 atgtctatgtat 35522884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 10343544 - 10343665
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||||||||| ||||| | ||| |||||||||  |  | |||| |||||||||||||| ||||||   ||||||| ||||||||||    
T  10343544 agagaagaggagaggaaagagaaagtgtgcgtctgcagagtccacggaaacatgtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagg 10343643  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||||||||||| |||||||||    
T  10343644 gtgtctatgtatcattactctt 10343665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 18207298 - 18207178
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||  ||||||||| |||||||||| || || |||||| | |||||| |||||||||| ||| ||||||  |||||||||||||||||||    
T  18207298 agagaagaggagatgaaagagaaagtgtgcttgtgtggggttcacgtgcc-acgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaagg 18207200  T
Q  101 gtgtctatgtatgattactctt 122  Q
     ||||||||||| || ||||||    
T  18207199 ttgtctatgtatcataactctt 18207178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 39255905 - 39256015
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||  ||||||||| ||| |||||| |||||||||||| | |||||| |||||||||| ||| | ||||  |||||||||||||||||||    
T  39255905 agagaagaggagatgaaagagaaagtgttcttgtgtggagtccacgtgcc-acgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaagg 39256003  T
Q  101 gtgtctatgtat 112  Q
     |||||||||||    
T  39256004 ttgtctatgtat 39256015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 40846094 - 40846205
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| |||  |||||||| |||||  | ||||| ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  40846094 agagaagagaagaagaaagagaaagtgtatttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaagg 40846193  T
Q  101 gtgtctatgtat 112  Q
     ||| |||||||    
T  40846194 atgtttatgtat 40846205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 46374807 - 46374894
Alignment:
Q  25 atgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtat 112  Q
    |||||||||||||| ||||| ||| | |||||| |||||||||||||| ||| ||||||||| ||||||||||||| |||||||||||    
T  46374807 atgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtat 46374894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 11044297 - 11044186
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| ||||| ||||||||| ||| ||||||||| |||||||||||||||||| ||          || ||||||||| |||||||||||||||||    
T  11044297 agagaagatgagaggaaagagaaagtgtacttgtgcggggtccacgtgactacgtgtcag----------gggtgtcaaaggatgtattgccacctaagg 11044208  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||||||||||| |||||||||    
T  11044207 gtgtctatgtatcattactctt 11044186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 22343480 - 22343360
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  ||   || ||| |||||||||||||| |||||| ||||||||||||||||||||    
T  22343480 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 22343381  T
Q  101 gtgtctatgtatgattactct 121  Q
    |||| ||||||| || |||||    
T  22343380 gtgtttatgtatcataactct 22343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 41915860 - 41915740
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| ||| ||||||||| |||||  || | || ||| |||||||||||| | |||||| ||||||||||||||||||||    
T  41915860 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagg 41915761  T
Q  101 gtgtctatgtatgattactct 121  Q
    |||| ||||||| || |||||    
T  41915760 gtgtttatgtatcataactct 41915740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 31735996 - 31735892
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| |||||||||||||  |||| ||| | |||||       ||||||||| ||| |||| ||||||||||||||||||    
T  31735996 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtg-------tttgtgtgggtgttaaagagtgtattgccacctaagg 31735904  T
Q  101 gtgtctatgtat 112  Q
     |||||||||||    
T  31735903 atgtctatgtat 31735892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 7728025 - 7727904
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||| ||||| ||| ||||||||| |||||  |||| || ||| |||||||| |||| |||||||  |||||||| ||||||||||    
T  7728025 agagaagagaagaagaaacagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagg 7727926  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||| ||||||| || ||||||    
T  7727925 gtgtttatgtatcataactctt 7727904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 35468836 - 35468957
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||||| || ||||||||| |||| |||||| | |||||| ||   || | | |||||||| ||||| ||||||| | |||||||||| ||||||    
T  35468836 agagaagaggataggaaagagaaagtgtgtttgtgcagggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtattgccatctaagg 35468935  T
Q  101 gtgtctatgtatgattactctt 122  Q
     ||||||||||| |||||||||    
T  35468936 atgtctatgtatcattactctt 35468957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 12311023 - 12310905
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||||| || ||||| ||||||||||||| | |  |||||||||| || ||| |||||||||| ||||| || |  | | |||| ||||||||||    
T  12311023 agagaagaggaaaggaaagataaaatgtgcttgttcaggatccacgtgaccacatgtcagatttttgtatggatatcca--gatatatttccacctaagg 12310926  T
Q  101 gtgtctatgtatgattactct 121  Q
    |||||||||||| || |||||    
T  12310925 gtgtctatgtatcataactct 12310905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 27744290 - 27744375
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgt 86  Q
    |||||||||||||| | ||||||||||||||| || ||  |||||||| | || ||| |||||||||||||| | |||||||||||    
T  27744290 agagaagaggagaggatagagaaaatgtgcttatgagggatccacgtggccacatgtcagatttttgtgtgggtatcaaagggtgt 27744375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 32564407 - 32564518
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| |||  |||||||| |||||  |  | || ||| |||||||||||||| |||||| |||||||||||||||||||     
T  32564407 agagaagagaagaagaaagagaaagtgtatttgtgcggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaga 32564506  T
Q  101 gtgtctatgtat 112  Q
     ||| |||||||    
T  32564507 atgtttatgtat 32564518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 41423801 - 41423690
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||  ||||||||||| ||||||| |||  || ||||||| || ||| ||||||||||||   ||||||  |||||||| ||| |||| |    
T  41423801 agagaagaggagatgaaagagaaaatatgcttgtacgggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatg 41423702  T
Q  101 gtgtctatgtat 112  Q
     |||||||||||    
T  41423701 atgtctatgtat 41423690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 16374820 - 16374894
Alignment:
Q  16 aaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattg 90  Q
    ||||||||  |||||||||| |   |||||||||| |||||| ||||||||||||||||||||| || |||||||    
T  16374820 aaagagaatgtgtgcttgtgtgagatccacgtgaccacgtgtcagatttttgtgtggatgtcaagggatgtattg 16374894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 45223111 - 45223040
Alignment:
Q  51 tacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatgattactctt 122  Q
    ||||||| |||||||||||| |||||  |||  ||||||||||||||||| ||| ||| ||| |||||||||    
T  45223111 tacgtgtcagatttttgtgtagatgttcaagaatgtattgccacctaaggatgtatatatatcattactctt 45223040  T

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Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 2318224 - 2318320
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccaccta 97  Q
    |||||||| ||||  ||||||||| | ||||| ||  | ||||||||||| ||  || |||||||||||||| ||||||  ||||| ||||||||||    
T  2318224 agagaagatgagatgaaagagaaagtatgcttatgtcgggtccacgtgaccacacgtcagatttttgtgtgggtgtcaagaggtgtcttgccaccta 2318320  T

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Target: scaffold0321 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 10090 - 10211
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||||||||||||| ||||||||| ||  |||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||| |    
T  10090 agagaagaggagagaaaagagaaagtgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaag 10189  T
Q  101 gtgtctatgtatgattactctt 122  Q
    |||||||||||| || ||||||    
T  10190 gtgtctatgtatcataactctt 10211  T

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Target: scaffold1268 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 910 - 1029
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||||||||| |||||||||||||  | ||||||||||||||| || ||||||||||||||| ||||||||||||||||||||| |    
T  910 agagaagaggagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaag 1009  T
Q  101 gtgtctatgtatgattactc 120  Q
     ||||||||||| |||||||    
T  1010 atgtctatgtatcattactc 1029  T

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Target: scaffold1267 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 910 - 1029
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||||||||| ||||||||| |||||||||||||  | ||||||||||||||| || ||||||||||||||| ||||||||||||||||||||| |    
T  910 agagaagaggagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaag 1009  T
Q  101 gtgtctatgtatgattactc 120  Q
     ||||||||||| |||||||    
T  1010 atgtctatgtatcattactc 1029  T

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Target: scaffold0237 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 4148 - 4029
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||||||||||||| ||||||| |||||  ||||||| ||||||||| |||||||||||||| ||| ||| |||||||||||| |||| |    
T  4148 agagaagagaagagaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaag 4049  T
Q  101 gtgtctatgtatgattactc 120  Q
    |||||||||||| |||||||    
T  4048 gtgtctatgtatcattactc 4029  T

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Target: scaffold0316 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 17168 - 17077
Alignment:
Q  6 agaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccaccta 97  Q
    |||| |||| ||||||||||||||||||||||| ||||| ||||| || ||| ||||||||||||||||||| | || |||||||| |||||    
T  17168 agagaagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtcgagggatgtattgcaaccta 17077  T

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Target: scaffold0110 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 8844 - 8951
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    |||||||| | ||| ||||||||||||| |||||| || ||||||||||||| |||| | |||||||||| |||||||||  |||||||| ||| |||||    
T  8844 agagaagatgggaggaaagagaaaatgtacttgtgtggggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaagg 8943  T
Q  101 gtgtctat 108  Q
     |||||||    
T  8944 atgtctat 8951  T

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Target: scaffold0018 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 152617 - 152514
Alignment:
Q  1 agagaagaggagagaaaagagaaaatgtgcttgtgcggagtccacgtgactacgtgtaagatttttgtgtggatgtcaaagggtgtattgccacctaagg 100  Q
    ||||||||| |||  ||||||||| |||  ||||||||  ||||  |||| || ||| |||||||||||||| |||||| ||||||||||||||| ||||    
T  152617 agagaagagaagaagaaagagaaagtgtatttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagg 152518  T
Q  101 gtgt 104  Q
    ||||    
T  152517 gtgt 152514  T

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