View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4030_high_57 (Length: 231)
Name: NF4030_high_57
Description: NF4030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4030_high_57 |
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Alignment Details
Target: chr4 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 31764077 - 31764269
Alignment:
| Q |
18 |
aaaatggacccctatttagttggttaggattttatttagaccactaaatattgagannnnnnnnngttctggtaaatgttgttgtggtatcaccacactc |
117 |
Q |
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| T |
31764077 |
aaaacggacccctatttagttggttaggattttatttagaccactaaatattaagatttttttttgttctggtaaatgttgttgtggtatcaccacactc |
31764176 |
T |
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| Q |
118 |
gctaaaatcctaactaactaactatatttctaatcaaaatcacatgaaaacataaaatcaagaggggtatcacggctccaaattcaactttgg |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31764177 |
gctaaaatcctaactaactaactatatttctaatcaaaatcacatgaaaacataaaatcaagaggggtatcacggctccaaattcaactttgg |
31764269 |
T |
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