View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4030_low_46 (Length: 253)
Name: NF4030_low_46
Description: NF4030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4030_low_46 |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 17 - 246
Target Start/End: Original strand, 2240332 - 2240561
Alignment:
| Q |
17 |
acttttatgtgaaactttgggatcacgttaacttacgtgattatctaagaatctaaaaaatattaaataaattggatgactccctaagtgactgtttaag |
116 |
Q |
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| T |
2240332 |
acttttatgtgaaactttgggatcacgttaacttaagtgattatctaagaatctaaaaaatattaaataaattggatgactccctaagtgactgtttaag |
2240431 |
T |
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| Q |
117 |
aatctttatacacgactgtcttaattaaatatttgatcctcgtttgagtttctccaaataagtcccggacaatgtgaattcatatttttaggttaatggt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2240432 |
aatctttatacacgactgtcttaattaaatatttgatcctcgtttgagtttctccaaataagtcccggacaatgtgaattcatatttttaggttaatggt |
2240531 |
T |
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| Q |
217 |
tggttggcgaatggctataaggtacctatg |
246 |
Q |
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||||||||||||||||||||||| |||||| |
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| T |
2240532 |
tggttggcgaatggctataaggtgcctatg |
2240561 |
T |
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