View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4032_high_51 (Length: 226)
Name: NF4032_high_51
Description: NF4032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4032_high_51 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 7 - 226
Target Start/End: Original strand, 2368655 - 2368874
Alignment:
| Q |
7 |
tatccaccttccggttatcctcattccggatatcatcatcaaccatcttatcatgctccacaatatggctatccatatccttcaggtacacttgatcaca |
106 |
Q |
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| T |
2368655 |
tatccaccttccggttatcctcattccggatatcatcatcaaccatcttatcatgctccacaatatggctatccatatccttcaggtacacttgatcaca |
2368754 |
T |
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| Q |
107 |
tcccaattttttatagagtatactatatgatcatgaatgaatttggattattaatttattgttgtataaagggcgtggatctggtataggaggattgatc |
206 |
Q |
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| T |
2368755 |
tcccaattttttatagagtatactatatgatcatgaatgaatttggattattaatttattgttgtataaagggcgtggatctggtataggaggattgatc |
2368854 |
T |
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| Q |
207 |
gcaggggcggcagctgcata |
226 |
Q |
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|||||||||||||||||||| |
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| T |
2368855 |
gcaggggcggcagctgcata |
2368874 |
T |
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