View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4032_high_52 (Length: 219)
Name: NF4032_high_52
Description: NF4032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4032_high_52 |
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Alignment Details
Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 36941004 - 36940812
Alignment:
| Q |
10 |
gtaaattattcttcctagcataacaagctccaactcttttttagaacacaaacaaaataaaaaatgagtactacagactaatttgtgatatgaaatagta |
109 |
Q |
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| T |
36941004 |
gtaaattattcttcctagcataacaagctccaactcgtttttagaacacaaacaaaataaaaaatgagtactacagactaatttgtgatatgaaatagta |
36940905 |
T |
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| Q |
110 |
gtactaagaaataaggattacattgtgcgagttctcactagtatgaaattaaattaactatatcaatttctgaattgtctcgtgagagttctg |
202 |
Q |
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| T |
36940904 |
gtactaagaaataaggattacattgtgcgagttctcactagtatgaaattaaattaactatatcaatttctgaattgtctcgtgagagttctg |
36940812 |
T |
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