View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4032_low_17 (Length: 431)
Name: NF4032_low_17
Description: NF4032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4032_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 397; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 1 - 413
Target Start/End: Original strand, 41722559 - 41722971
Alignment:
| Q |
1 |
gatttcatttatttcttattcaagtcactttcaaattagttgagttgatgctccaaattagctaccacgtctttcatgaaaaagggatgaggtgaagagc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41722559 |
gatttcatttatttcttattcaagtcactttcaaattagttgagttgatgctccaaattagctaccacgtctttcatgaaaaagggatgaggtgaagagc |
41722658 |
T |
|
| Q |
101 |
tctttttcactatttcacaacaaaaatgggttaaaatgtaaaattgtgacactttcaagccaatgatatccaatttaaaaataaagctaatattgcataa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
41722659 |
tctttttcactatttcacaacaaaaatgggttaaaatgtaaaactgtgacactttcaagccaatgatatccattttaaaaataaagctaatattgcataa |
41722758 |
T |
|
| Q |
201 |
tcaagagttatcatttttcaataatagttgatgttggaagacaatacgtgtagatgacctacctataaaatcacagtgccccaaaagtgtaggtgcattc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41722759 |
tcaagagttatcatttttcaataatagttgatgttggaagacaatacgtgtatatgacctacctataaaatcacagtgccccaaaagtgtaggtgcattc |
41722858 |
T |
|
| Q |
301 |
accaaaaattgcctaaggcagtggtaatggcaagctagtagtcacattccattccgccaccaaattggcacacatcaaactttcattcaaaacaatgaac |
400 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41722859 |
accaaaaattgcctaaggtagtggtaatggcaagctagtagtcacattccattccgccaccaaattggcacacatcaaactttcattcaaaacaatgaac |
41722958 |
T |
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| Q |
401 |
taaatgttgaaac |
413 |
Q |
| |
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||||||||||||| |
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| T |
41722959 |
taaatgttgaaac |
41722971 |
T |
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