View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4032_low_47 (Length: 247)
Name: NF4032_low_47
Description: NF4032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4032_low_47 |
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Alignment Details
Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 40709109 - 40709346
Alignment:
| Q |
1 |
tttgaattcaaatgccattctatctannnnnnncaacattaggacttaaattctgtatctcaagatttacaacactcacacgtaccaaccacttgggaac |
100 |
Q |
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||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40709109 |
tttgaattcaaatgctattctatctatttttttcaacattaggacttaaattctgtatctcaagatttacaacactcacacgtaccaaccacttgggaac |
40709208 |
T |
|
| Q |
101 |
atgagtgttaagatccagaaagaacnnnnnnngactatctactatgggctatatatagcttatgtgtctagcattgcttaactatgtctagtttttattt |
200 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40709209 |
atgagtgttaagatccagaaagaacaaaaaaagactatctactatgggctatatatagcttatgtgtctagcattgcttaactatgtctagtttttattt |
40709308 |
T |
|
| Q |
201 |
atttattttgtgaaggagtgctttttcatatgatgatg |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
40709309 |
atttattttgtgaaggagtgctttttcatatgatgatg |
40709346 |
T |
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