View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4033_low_33 (Length: 227)
Name: NF4033_low_33
Description: NF4033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4033_low_33 |
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Alignment Details
Target: chr8 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 8828863 - 8829070
Alignment:
| Q |
1 |
tgttgcaccatgaagttgtaggggatctaattttgttttgatatatatttgattgttattcnnnnnnnnnnnnaaaagattgtgaatcatggagttccag |
100 |
Q |
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| T |
8828863 |
tgttgcaccatgaagttgtaggggatctaattttgttttgatatatatttgattgttattctatttttttttttaa-gattgtgaatcatggagttccag |
8828961 |
T |
|
| Q |
101 |
aggaggttataaataacatgatgagtgtgtcaaaagaattcttcaatttaccagaaagtgaaagaatgaagaattactcagatgatccattaaagacaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8828962 |
aggaggttataaataacatgatgagtgtgtcaaaagaattcttcaatttaccagaaagtgaaagaatgaagaattactcagatgatccattaaagacaac |
8829061 |
T |
|
| Q |
201 |
tagactttc |
209 |
Q |
| |
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||||||||| |
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| T |
8829062 |
tagactttc |
8829070 |
T |
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