View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4033_low_9 (Length: 462)

Name: NF4033_low_9
Description: NF4033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4033_low_9
NF4033_low_9
[»] chr3 (45 HSPs)
chr3 (105-332)||(7158400-7158627)
chr3 (330-446)||(7158837-7158953)
chr3 (1-108)||(49607410-49607517)
chr3 (1-104)||(53982011-53982114)
chr3 (1-104)||(33644200-33644303)
chr3 (1-99)||(52629305-52629403)
chr3 (1-106)||(27714888-27714993)
chr3 (1-106)||(54868892-54868997)
chr3 (1-109)||(31456684-31456792)
chr3 (1-104)||(8076393-8076496)
chr3 (1-105)||(17470404-17470508)
chr3 (1-100)||(48587088-48587187)
chr3 (1-106)||(11095352-11095455)
chr3 (1-106)||(33118848-33118953)
chr3 (1-104)||(26141529-26141632)
chr3 (1-107)||(36707425-36707527)
chr3 (2-105)||(9562998-9563101)
chr3 (1-104)||(51419357-51419460)
chr3 (1-99)||(26754700-26754798)
chr3 (1-105)||(24699951-24700055)
chr3 (1-108)||(11347919-11348026)
chr3 (1-104)||(14623836-14623939)
chr3 (1-106)||(41189761-41189866)
chr3 (1-104)||(20764912-20765015)
chr3 (1-100)||(30801730-30801829)
chr3 (1-104)||(47531865-47531968)
chr3 (1-103)||(13898052-13898154)
chr3 (1-105)||(35536625-35536729)
chr3 (1-110)||(8956756-8956865)
chr3 (1-106)||(11907369-11907474)
chr3 (1-104)||(41080709-41080810)
chr3 (42-105)||(36331416-36331479)
chr3 (1-104)||(45058550-45058652)
chr3 (1-101)||(25407144-25407245)
chr3 (1-82)||(36331326-36331407)
chr3 (1-106)||(35965779-35965876)
chr3 (1-105)||(48375703-48375807)
chr3 (1-99)||(42823116-42823214)
chr3 (35-105)||(21746212-21746284)
chr3 (1-106)||(35093583-35093688)
chr3 (1-106)||(1758453-1758560)
chr3 (34-77)||(52629951-52629993)
chr3 (36-77)||(53581793-53581833)
chr3 (36-76)||(40480874-40480913)
chr3 (81-109)||(48587014-48587042)
[»] chr2 (38 HSPs)
chr2 (1-104)||(17473020-17473123)
chr2 (1-105)||(7465732-7465836)
chr2 (1-108)||(33436097-33436204)
chr2 (1-106)||(9058478-9058583)
chr2 (1-105)||(5574485-5574589)
chr2 (1-101)||(28863458-28863558)
chr2 (1-106)||(10249379-10249484)
chr2 (1-104)||(13438343-13438446)
chr2 (1-106)||(30915461-30915566)
chr2 (4-105)||(32505648-32505749)
chr2 (1-104)||(40701478-40701581)
chr2 (1-101)||(19930817-19930917)
chr2 (1-108)||(20700811-20700918)
chr2 (1-104)||(27864704-27864807)
chr2 (1-104)||(28381652-28381755)
chr2 (4-104)||(4060685-4060785)
chr2 (1-108)||(38273139-38273246)
chr2 (1-104)||(40613899-40614002)
chr2 (1-107)||(38882808-38882916)
chr2 (1-108)||(42257189-42257296)
chr2 (1-107)||(26891501-26891607)
chr2 (1-105)||(33436210-33436314)
chr2 (1-105)||(2533123-2533226)
chr2 (1-105)||(36168835-36168939)
chr2 (1-103)||(41575138-41575241)
chr2 (1-110)||(45097732-45097841)
chr2 (1-109)||(13365346-13365456)
chr2 (1-104)||(17820001-17820104)
chr2 (1-104)||(38732354-38732457)
chr2 (1-104)||(43490121-43490224)
chr2 (1-86)||(2997484-2997569)
chr2 (1-98)||(3439985-3440082)
chr2 (35-106)||(17823782-17823853)
chr2 (4-61)||(3737986-3738043)
chr2 (1-54)||(3154193-3154246)
chr2 (39-106)||(15428775-15428842)
chr2 (36-77)||(16096873-16096913)
chr2 (36-77)||(42849794-42849834)
[»] chr5 (36 HSPs)
chr5 (1-105)||(2740273-2740377)
chr5 (1-109)||(18520881-18520989)
chr5 (1-104)||(33149635-33149738)
chr5 (4-109)||(14831809-14831914)
chr5 (1-106)||(36732939-36733044)
chr5 (1-108)||(13811648-13811755)
chr5 (1-104)||(35785199-35785302)
chr5 (1-104)||(40145407-40145510)
chr5 (1-104)||(35943889-35943992)
chr5 (1-104)||(42414299-42414402)
chr5 (1-104)||(28177775-28177878)
chr5 (215-329)||(4866635-4866751)
chr5 (4-108)||(31008984-31009088)
chr5 (1-109)||(36875609-36875708)
chr5 (1-104)||(26720516-26720619)
chr5 (1-104)||(26990265-26990368)
chr5 (1-106)||(15409607-15409712)
chr5 (348-428)||(4866987-4867067)
chr5 (1-105)||(6679697-6679801)
chr5 (1-107)||(3921262-3921368)
chr5 (1-105)||(2252165-2252269)
chr5 (4-104)||(20073516-20073616)
chr5 (13-105)||(41470425-41470517)
chr5 (1-106)||(39688894-39688999)
chr5 (3-107)||(38296200-38296304)
chr5 (1-104)||(6259998-6260101)
chr5 (1-104)||(33825321-33825424)
chr5 (41-99)||(10356639-10356698)
chr5 (1-56)||(31132392-31132447)
chr5 (1-103)||(16327902-16328004)
chr5 (1-106)||(9603811-9603916)
chr5 (1-60)||(21370048-21370107)
chr5 (346-412)||(4813845-4813913)
chr5 (81-109)||(16115245-16115273)
chr5 (81-109)||(33149551-33149579)
chr5 (1-73)||(39557514-39557586)
[»] chr4 (39 HSPs)
chr4 (1-109)||(50052425-50052533)
chr4 (1-104)||(6034044-6034147)
chr4 (1-106)||(48183046-48183151)
chr4 (1-109)||(480444-480552)
chr4 (1-104)||(11511459-11511562)
chr4 (1-105)||(29234242-29234346)
chr4 (1-109)||(42044364-42044472)
chr4 (1-104)||(41236347-41236450)
chr4 (1-112)||(29239878-29239989)
chr4 (1-106)||(24995104-24995209)
chr4 (1-104)||(3481654-3481757)
chr4 (1-104)||(54473530-54473633)
chr4 (1-106)||(23608233-23608338)
chr4 (4-104)||(50526171-50526271)
chr4 (1-104)||(31910192-31910295)
chr4 (1-104)||(40574779-40574882)
chr4 (1-118)||(19670713-19670830)
chr4 (1-106)||(29977883-29977988)
chr4 (1-99)||(53352563-53352660)
chr4 (1-66)||(41823920-41823985)
chr4 (1-106)||(55475189-55475294)
chr4 (1-105)||(47986207-47986311)
chr4 (1-105)||(50813889-50813993)
chr4 (1-86)||(17983740-17983825)
chr4 (1-106)||(29547956-29548061)
chr4 (1-106)||(32766956-32767061)
chr4 (3-105)||(28480267-28480369)
chr4 (3-105)||(28481142-28481244)
chr4 (3-105)||(28482017-28482119)
chr4 (36-106)||(47104542-47104612)
chr4 (1-106)||(48647723-48647828)
chr4 (39-104)||(55079749-55079814)
chr4 (1-104)||(8343160-8343263)
chr4 (1-96)||(29589737-29589831)
chr4 (1-105)||(44536743-44536846)
chr4 (15-78)||(33703245-33703307)
chr4 (39-104)||(18924530-18924595)
chr4 (1-64)||(56300162-56300225)
chr4 (31-72)||(18769141-18769182)
[»] chr1 (36 HSPs)
chr1 (4-107)||(2581912-2582015)
chr1 (1-104)||(9474873-9474976)
chr1 (1-104)||(47452317-47452420)
chr1 (1-110)||(38595148-38595257)
chr1 (4-105)||(51898683-51898784)
chr1 (1-104)||(3000319-3000422)
chr1 (1-109)||(8346385-8346493)
chr1 (1-104)||(27564732-27564835)
chr1 (1-104)||(48716279-48716382)
chr1 (1-106)||(38632318-38632423)
chr1 (1-105)||(41758804-41758908)
chr1 (1-105)||(50630457-50630561)
chr1 (1-107)||(32813244-32813350)
chr1 (1-101)||(44548373-44548473)
chr1 (1-104)||(43132-43235)
chr1 (5-104)||(37649198-37649297)
chr1 (1-97)||(26440741-26440837)
chr1 (1-110)||(5958997-5959106)
chr1 (1-106)||(26274430-26274535)
chr1 (4-103)||(11152378-11152476)
chr1 (1-104)||(50590997-50591100)
chr1 (1-74)||(13414791-13414864)
chr1 (1-106)||(49811524-49811629)
chr1 (1-107)||(23597088-23597194)
chr1 (1-99)||(44453984-44454082)
chr1 (1-106)||(45044557-45044662)
chr1 (1-105)||(37926435-37926539)
chr1 (1-104)||(41608490-41608593)
chr1 (4-77)||(48489328-48489400)
chr1 (1-104)||(47748443-47748545)
chr1 (4-104)||(3302533-3302633)
chr1 (9-73)||(44334175-44334239)
chr1 (15-77)||(750240-750301)
chr1 (36-77)||(4401453-4401493)
chr1 (36-77)||(7447950-7447990)
chr1 (36-77)||(50448195-50448235)
[»] chr7 (40 HSPs)
chr7 (1-106)||(7389387-7389492)
chr7 (1-105)||(3434561-3434665)
chr7 (1-106)||(8080380-8080485)
chr7 (1-101)||(3783998-3784098)
chr7 (1-105)||(36361910-36362014)
chr7 (1-113)||(38837208-38837320)
chr7 (1-104)||(4999511-4999614)
chr7 (1-104)||(38267040-38267143)
chr7 (1-107)||(40957704-40957810)
chr7 (1-106)||(19436184-19436289)
chr7 (1-109)||(35137528-35137636)
chr7 (1-105)||(36362025-36362129)
chr7 (1-104)||(19329842-19329945)
chr7 (1-103)||(32951490-32951592)
chr7 (1-101)||(3694370-3694470)
chr7 (1-113)||(8238203-8238316)
chr7 (1-99)||(35522881-35522979)
chr7 (1-106)||(38044195-38044300)
chr7 (1-104)||(21234401-21234504)
chr7 (10-104)||(46374808-46374902)
chr7 (1-106)||(36208171-36208276)
chr7 (1-105)||(22343360-22343464)
chr7 (1-105)||(41915740-41915844)
chr7 (1-107)||(11044185-11044281)
chr7 (1-108)||(18207176-18207282)
chr7 (1-109)||(35468852-35468960)
chr7 (38-107)||(10343597-10343666)
chr7 (1-105)||(46033798-46033902)
chr7 (1-104)||(39255921-39256023)
chr7 (1-104)||(40846110-40846213)
chr7 (1-104)||(41423682-41423785)
chr7 (4-109)||(7727901-7728006)
chr7 (1-74)||(16374821-16374894)
chr7 (1-104)||(31735884-31735980)
chr7 (1-104)||(32564423-32564526)
chr7 (1-105)||(26296643-26296747)
chr7 (2-70)||(27744307-27744375)
chr7 (1-99)||(2318240-2318338)
chr7 (35-109)||(45223037-45223111)
chr7 (36-77)||(32029752-32029792)
[»] chr8 (34 HSPs)
chr8 (1-104)||(12831047-12831150)
chr8 (1-104)||(15197333-15197436)
chr8 (1-104)||(34012293-34012396)
chr8 (1-110)||(504118-504227)
chr8 (1-106)||(14547920-14548025)
chr8 (4-105)||(37038478-37038579)
chr8 (1-109)||(5957825-5957933)
chr8 (1-104)||(1179937-1180040)
chr8 (1-104)||(23122594-23122697)
chr8 (1-104)||(40423940-40424043)
chr8 (1-110)||(43414578-43414687)
chr8 (1-107)||(10284628-10284734)
chr8 (1-105)||(44507084-44507188)
chr8 (1-99)||(10621084-10621182)
chr8 (1-104)||(15048179-15048281)
chr8 (1-85)||(8841429-8841513)
chr8 (1-109)||(16383372-16383480)
chr8 (1-103)||(9122196-9122288)
chr8 (1-106)||(4854860-4854965)
chr8 (1-106)||(34307214-34307319)
chr8 (1-106)||(15258926-15259031)
chr8 (1-106)||(24307790-24307895)
chr8 (1-106)||(42221513-42221618)
chr8 (1-109)||(16056398-16056506)
chr8 (36-104)||(20074966-20075034)
chr8 (41-109)||(24307624-24307692)
chr8 (1-109)||(30479471-30479579)
chr8 (1-105)||(32032724-32032827)
chr8 (1-105)||(17443824-17443928)
chr8 (25-104)||(14055613-14055692)
chr8 (1-109)||(38229424-38229531)
chr8 (15-77)||(2547100-2547161)
chr8 (15-77)||(29705466-29705527)
chr8 (81-109)||(34012209-34012237)
[»] chr6 (24 HSPs)
chr6 (1-104)||(32869678-32869781)
chr6 (1-101)||(22880655-22880755)
chr6 (1-105)||(11427615-11427721)
chr6 (1-109)||(17598549-17598657)
chr6 (1-104)||(29857827-29857930)
chr6 (1-107)||(6209462-6209568)
chr6 (1-113)||(23128124-23128236)
chr6 (1-104)||(31109397-31109500)
chr6 (1-105)||(31976247-31976351)
chr6 (1-113)||(15832568-15832680)
chr6 (1-107)||(30341357-30341463)
chr6 (1-106)||(15990039-15990144)
chr6 (1-108)||(31110758-31110863)
chr6 (1-104)||(15508021-15508124)
chr6 (1-110)||(946370-946479)
chr6 (1-100)||(28536485-28536582)
chr6 (1-104)||(31953027-31953130)
chr6 (1-109)||(12732477-12732585)
chr6 (1-104)||(4231548-4231651)
chr6 (1-99)||(9379709-9379807)
chr6 (39-105)||(22422053-22422119)
chr6 (36-77)||(7367674-7367714)
chr6 (36-77)||(26669944-26669984)
chr6 (81-109)||(32869837-32869865)
[»] scaffold0237 (1 HSPs)
scaffold0237 (1-104)||(4029-4132)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-113)||(10106-10218)
[»] scaffold1268 (1 HSPs)
scaffold1268 (1-104)||(926-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (1-104)||(926-1029)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-88)||(152514-152601)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-104)||(8860-8963)
[»] scaffold0316 (1 HSPs)
scaffold0316 (1-75)||(17083-17157)
[»] scaffold0119 (1 HSPs)
scaffold0119 (36-77)||(810-850)


Alignment Details
Target: chr3 (Bit Score: 220; Significance: 1e-121; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 105 - 332
Target Start/End: Original strand, 7158400 - 7158627
Alignment:
Q  105 tttttaaaacctttgtattggaatccattcaataacgcaagttatttgaatttttctatttaactctcaaacataggtaaaatatgcatcatccgaccat 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7158400 tttttaaaacctttgtattggaatccattcaataacgcaagttatttgaatttttctatttaactctcaaacataggtaaaatatgcatcatccaaccat 7158499  T
Q  205 gacaagaacaaccaatttaataattgtgtgaatgtgttgaattgtgattgtaggaaatccgaatccattgacaacatggaatggagtagcttgatatatt 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7158500 gacaagaacaaccaatttaataattgtgtgaatgtgttgaattgtgattgtaggaaatccaaatccattgacaacatggaatggagtagcttgatatatt 7158599  T
Q  305 ctgctcattatttctgctatgtttgcat 332  Q
    ||||||||||||||||||||||||||||    
T  7158600 ctgctcattatttctgctatgtttgcat 7158627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 330 - 446
Target Start/End: Original strand, 7158837 - 7158953
Alignment:
Q  330 cataatttaatgtgctaaaatgtcaatatgttaaatttgatagttgatttatataaataaacatgatttggtttaatgctcttgcaatgatgcctttttc 429  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7158837 cataatttaatgtgctaaaatgtcaatatgttaaatttgatagttgatttatataaataaacatgatttggtttaatgctcttgcaatgatgcctttttc 7158936  T
Q  430 tgttatagggtcaattt 446  Q
    |||||||||||||||||    
T  7158937 tgttatagggtcaattt 7158953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 49607517 - 49607410
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  49607517 aagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 49607418  T
Q  101 actctttt 108  Q
    ||||||||    
T  49607417 actctttt 49607410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 53982114 - 53982011
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  53982114 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 53982015  T
Q  101 actc 104  Q
    ||||    
T  53982014 actc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 33644303 - 33644200
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  33644303 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcatt 33644204  T
Q  101 actc 104  Q
    ||||    
T  33644203 actc 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 52629403 - 52629305
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcat 99  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  52629403 aagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 27714888 - 27714993
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||    
T  27714888 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcatt 27714987  T
Q  101 actctt 106  Q
    ||||||    
T  27714988 actctt 27714993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 54868892 - 54868997
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  54868892 aagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcatt 54868991  T
Q  101 actctt 106  Q
    ||||||    
T  54868992 actctt 54868997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 31456792 - 31456684
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||    
T  31456792 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcatt 31456693  T
Q  101 actcttttt 109  Q
    ||| |||||    
T  31456692 acttttttt 31456684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 8076496 - 8076393
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  8076496 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcatt 8076397  T
Q  101 actc 104  Q
    ||||    
T  8076396 actc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 17470508 - 17470404
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||| |||||||||||||||||    
T  17470508 aagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcatt 17470409  T
Q  101 actct 105  Q
    |||||    
T  17470408 actct 17470404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 48587088 - 48587187
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||| |||||||||||||    
T  48587088 aagagaaagtgtacttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcatt 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 11095352 - 11095455
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||| || |||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11095352 aagagaaagtgtgtttatgcggggt--acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 11095449  T
Q  101 actctt 106  Q
    ||||||    
T  11095450 actctt 11095455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 33118848 - 33118953
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||| || || ||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||     
T  33118848 aagagaaagtgtgtttctgagggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcata 33118947  T
Q  101 actctt 106  Q
    ||||||    
T  33118948 actctt 33118953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 26141529 - 26141632
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||     
T  26141529 aagagaaagtgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcata 26141628  T
Q  101 actc 104  Q
    ||||    
T  26141629 actc 26141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 36707425 - 36707527
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| || |||||||| |||||||||||||    
T  36707425 aagagaaagtgtgc----gcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcatt 36707520  T
Q  101 actcttt 107  Q
    |||||||    
T  36707521 actcttt 36707527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 9563101 - 9562998
Alignment:
Q  2 agagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatta 101  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||| | ||| ||||||||| ||||||| ||||||| ||||| ||||||||||||    
T  9563101 agagaaagtgtgtttgtgcaggatccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcatta 9563002  T
Q  102 ctct 105  Q
    ||||    
T  9563001 ctct 9562998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 51419357 - 51419460
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| || | ||| | ||||||||||||||||||||||||| ||||| ||||||| ||||||||| ||||||||||||||     
T  51419357 aagagaaagtgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcata 51419456  T
Q  101 actc 104  Q
    ||||    
T  51419457 actc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26754798 - 26754700
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcat 99  Q
    |||||||| |||||||||||||| |||| ||||| || |||||||||||||||||| |||| ||||||||||||||| ||||||||||||||| |||||    
T  26754798 aagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 24699951 - 24700055
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||| |||| | || |||||||| | ||||| ||||||||| ||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  24699951 aagagaaagtgtgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcatt 24700050  T
Q  101 actct 105  Q
    |||||    
T  24700051 actct 24700055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 11347919 - 11348026
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||| ||| || |||| ||| | ||||||||||||||||||||| ||||||||| ||||||| || |||||| ||||||||||||||     
T  11347919 aagagaaagtgtgcttatgcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcata 11348018  T
Q  101 actctttt 108  Q
    ||||||||    
T  11348019 actctttt 11348026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 14623836 - 14623939
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||| | | ||||| |||  || |||||||||||| |||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  14623836 aagagaaagtgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcatt 14623935  T
Q  101 actc 104  Q
    ||||    
T  14623936 actc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 41189761 - 41189866
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||| ||| | |||||||| |||||| ||||||||||||| | |||||||||| |||||| ||| ||||||||||     
T  41189761 aagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcata 41189860  T
Q  101 actctt 106  Q
    ||||||    
T  41189861 actctt 41189866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 20764912 - 20765015
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||| |||| |||| ||| | ||||||||||||||||||||||||| |||| ||||||| ||| |||||| ||||||||| ||||     
T  20764912 aagagaaagtgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcata 20765011  T
Q  101 actc 104  Q
    ||||    
T  20765012 actc 20765015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 30801730 - 30801829
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||| |||||||||| ||| ||||  ||||||| ||||| |||||||||||||| ||||||||||||||  || ||||||||||||||||||||||    
T  30801730 aagagaaaatgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcatt 30801829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 47531968 - 47531865
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| | ||  || | |||||||||||| |||||||| ||| ||| ||||||||||||||||||| ||||||||||||||     
T  47531968 aagagaaagtgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcata 47531869  T
Q  101 actc 104  Q
    ||||    
T  47531868 actc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 13898052 - 13898154
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||| | | ||||| |||  ||||||||||||||| |||||||||||| ||||||||||||| |||||| ||| ||| |||||||    
T  13898052 aagagaaagtgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatctatcatt 13898151  T
Q  101 act 103  Q
    |||    
T  13898152 act 13898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 35536729 - 35536625
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||| |||||||||||||   | ||||| |||| |||||||| |||||| ||||||||||||| ||||||||||||  ||||| |||||||||||||||    
T  35536729 aagaggaagtgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcatt 35536630  T
Q  101 actct 105  Q
    |||||    
T  35536629 actct 35536625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 8956865 - 8956756
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||| |||||||||||||   | ||||| |||  |||||||| |||||| ||||||||||||||| ||||||||||  ||||| |||||||||||||||    
T  8956865 aagaggaagtgtgcttgtgtaaggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcatt 8956766  T
Q  101 actcttttta 110  Q
    ||||| ||||    
T  8956765 actctattta 8956756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 11907474 - 11907369
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||| |||||||||||||| ||||  |||| || ||||||||||||||||| ||||  | | |||||||| || |||||||||||||||||||||     
T  11907474 aagagaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtgtctatgtatcata 11907375  T
Q  101 actctt 106  Q
    ||||||    
T  11907374 actctt 11907369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 41080810 - 41080709
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||| |||||||||| ||| ||||| |||| || | ||||||||||| |||||||||||||||||| |||| | |||||| |||||||||||||||    
T  41080810 aagagaaaatgtgcttgtgtggg-tccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgcta-ctaaggatgtctatgtatcatt 41080713  T
Q  101 actc 104  Q
    ||||    
T  41080712 actc 41080709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 36331416 - 36331479
Alignment:
Q  42 cagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactct 105  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||| |||||||||| |||||    
T  36331416 cagatttttgtgtggatgtcaaggggtgcattgccatctaagggtgtttatgtatcataactct 36331479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 45058550 - 45058652
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||| | |||||||||| ||||  ||   || |||||||||||| |||||||||||| ||||||||||||| |||||||||| ||||||||||     
T  45058550 aagagaaagtatacttgtgcggggtccatatggtcacatgtcagatttttatgtgggtgtcaa-gggtgtattgccacctaagggtgtttatgtatcata 45058648  T
Q  101 actc 104  Q
    ||||    
T  45058649 actc 45058652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 25407144 - 25407245
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagattttt-gtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcat 99  Q
    ||||||||||||| ||||| ||||||||  |||  ||||||||||||||| ||||| ||||||| |||| |||||||| ||| || ||| ||||||||||    
T  25407144 aagagaaagtgtgtttgtgtgggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatggttgtgtatgtatcat 25407243  T
Q  100 ta 101  Q
    ||    
T  25407244 ta 25407245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 36331326 - 36331407
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaa 82  Q
    |||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| ||||| ||||||| ||||    
T  36331326 aagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 35965779 - 35965876
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||||| ||||||||||        ||||||||||| ||||||||||||||| ||||||  ||  ||||| ||| |||||||||||    
T  35965779 aagagaaagtgtgcttgtgcaggatccacgt--------gtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcatt 35965870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 48375703 - 48375807
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||| |||||||||||||| |||| ||||| ||  ||||||||||||| ||| | |  | |||||||||| || ||||||||||||||| |||||     
T  48375703 aagagaaaatgtgcttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaagggtgtctatgaatcata 48375802  T
Q  101 actct 105  Q
    |||||    
T  48375803 actct 48375807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 42823214 - 42823116
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcat 99  Q
    |||||||||| | ||| |||||| ||||  |||| || ||||| |||||| |||||||||||| ||||||||| |||  ||| ||||| ||||||||||    
T  42823214 aagagaaagtatacttatgcggggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatggtgtttatgtatcat 42823116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 21746212 - 21746284
Alignment:
Q  35 tacgtgtcagatttttgtgtggg--tgtcaaagggtgtattgccatctaagggtgtctatgtatcattactct 105  Q
    |||||||||||||||||||||||  |||| | |  |||||||||| |||||| ||| ||||||||||||||||    
T  21746212 tacgtgtcagatttttgtgtgggggtgtccaggaatgtattgccacctaaggatgtatatgtatcattactct 21746284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 35093688 - 35093583
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||  ||  | ||| |||| || ||||||||||||| |||| ||||||| | ||||||| || |||| | |||||||||||| |     
T  35093688 aagagaaagtgtgcttgtatggagttcacatgaccacatgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatcgta 35093589  T
Q  101 actctt 106  Q
    ||||||    
T  35093588 actctt 35093583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 1758453 - 1758560
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaa--agggtgtattgccatctaagggtgtctatgtatca 98  Q
    |||||||| |||| ||||| ||  ||||||| || |  |||||||||||||||||||||||||   ||||||||||| | ||| || || ||||||||||    
T  1758453 aagagaaaatgtgtttgtgtggagtccacgtaaccatatgtcagatttttgtgtgggtgtcaaggggggtgtattgcaacctatggttgactatgtatca 1758552  T
Q  99 ttactctt 106  Q
    | ||||||    
T  1758553 taactctt 1758560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 52629951 - 52629993
Alignment:
Q  34 ctacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 77  Q
    |||||||||||| |||||||||||||| ||||||||||||||||    
T  52629951 ctacgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 52629993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 53581833 - 53581793
Alignment:
Q  36 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 77  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  53581833 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 53581793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 40480874 - 40480913
Alignment:
Q  36 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgcc 76  Q
    |||||||||| |||||||||||||| |||||||||||||||    
T  40480874 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgcc 40480913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 109
Target Start/End: Complemental strand, 48587042 - 48587014
Alignment:
Q  81 aagggtgtctatgtatcattactcttttt 109  Q
    |||||||||||||||||||||||||||||    
T  48587042 aagggtgtctatgtatcattactcttttt 48587014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 1e-51; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 17473123 - 17473020
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17473123 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 17473024  T
Q  101 actc 104  Q
    ||||    
T  17473023 actc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 7465732 - 7465836
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7465732 aagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 7465831  T
Q  101 actct 105  Q
    |||||    
T  7465832 actct 7465836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 33436097 - 33436204
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33436097 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 33436196  T
Q  101 actctttt 108  Q
    ||||||||    
T  33436197 actctttt 33436204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 9058583 - 9058478
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9058583 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 9058484  T
Q  101 actctt 106  Q
    ||||||    
T  9058483 actctt 9058478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 5574485 - 5574589
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  5574485 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcatt 5574584  T
Q  101 actct 105  Q
    |||||    
T  5574585 actct 5574589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 28863558 - 28863458
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28863558 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 28863459  T
Q  101 a 101  Q
    |    
T  28863458 a 28863458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 10249379 - 10249484
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||    
T  10249379 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcatt 10249478  T
Q  101 actctt 106  Q
    ||||||    
T  10249479 actctt 10249484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 13438446 - 13438343
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||    
T  13438446 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcatt 13438347  T
Q  101 actc 104  Q
    ||||    
T  13438346 actc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 30915566 - 30915461
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  30915566 aagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcatt 30915467  T
Q  101 actctt 106  Q
    ||||||    
T  30915466 actctt 30915461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 32505648 - 32505749
Alignment:
Q  4 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattact 103  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||    
T  32505648 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattact 32505747  T
Q  104 ct 105  Q
    ||    
T  32505748 ct 32505749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 40701581 - 40701478
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  40701581 aagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcatt 40701482  T
Q  101 actc 104  Q
    ||||    
T  40701481 actc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 19930817 - 19930917
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  19930817 aagagaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 19930916  T
Q  101 a 101  Q
    |    
T  19930917 a 19930917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20700918 - 20700811
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||  ||||| |||||||||||||||    
T  20700918 aagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcatt 20700819  T
Q  101 actctttt 108  Q
    ||||||||    
T  20700818 actctttt 20700811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 27864807 - 27864704
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||    
T  27864807 aagagaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 27864708  T
Q  101 actc 104  Q
    ||||    
T  27864707 actc 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 28381652 - 28381755
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  28381652 aagagaaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcatt 28381751  T
Q  101 actc 104  Q
    ||||    
T  28381752 actc 28381755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 4060785 - 4060685
Alignment:
Q  4 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattact 103  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| || |||||||||||||||||||||||||    
T  4060785 agaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattact 4060686  T
Q  104 c 104  Q
    |    
T  4060685 c 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 38273139 - 38273246
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||| ||||||| |||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||     
T  38273139 aagagaaagtgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcata 38273238  T
Q  101 actctttt 108  Q
    ||||||||    
T  38273239 actctttt 38273246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 40613899 - 40614002
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||| ||| | |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||     
T  40613899 aagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcata 40613998  T
Q  101 actc 104  Q
    ||||    
T  40613999 actc 40614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 38882808 - 38882916
Alignment:
Q  1 aagagaaagtgtgcttgtgcggga---tccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatc 97  Q
    ||||||||||| |||||||||||    |||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||    
T  38882808 aagagaaagtgcgcttgtgcgggggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatc 38882906  T
Q  98 attactcttt 107  Q
    ||||||||||    
T  38882907 attactcttt 38882916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 42257296 - 42257189
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||| ||| | ||||||||||||||| ||||||||||||| | |||||||||| |||| | ||||||||||||||     
T  42257296 aagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcata 42257197  T
Q  101 actctttt 108  Q
    ||||||||    
T  42257196 actctttt 42257189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 26891501 - 26891607
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||| ||||||||| || | |||||||||| || ||||||||||||||||||||||| | ||||||||||||| ||||||||| |||||||||||     
T  26891501 aagagaaaatgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcata 26891600  T
Q  101 actcttt 107  Q
    |||||||    
T  26891601 actcttt 26891607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 33436314 - 33436210
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||    ||||| ||   ||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  33436314 aagagaaagtgtgcttgtgcaaagtccacatggtcacgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcatt 33436215  T
Q  101 actct 105  Q
    |||||    
T  33436214 actct 33436210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 2533226 - 2533123
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||| |||||||||||||||||| || | ||| ||||||||||||||||||||| ||||||||||| ||||||||||  ||||| ||||||||||||||     
T  2533226 aagaaaaagtgtgcttgtgcggggtctatgtggctacgtgtcagatttttgtgt-ggtgtcaaaggatgtattgccacttaaggatgtctatgtatcata 2533128  T
Q  101 actct 105  Q
    |||||    
T  2533127 actct 2533123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 36168939 - 36168835
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||| |||||||||||| |||| ||| | |||||||| ||||||||||||| || ||||| ||||||| ||||||||| ||||||||||||||     
T  36168939 aagagaaagtatgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcata 36168840  T
Q  101 actct 105  Q
    |||||    
T  36168839 actct 36168835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 41575241 - 41575138
Alignment:
Q  1 aagagaaagtgtgcttgtgc-gggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcat 99  Q
    |||||||||||||||||||  ||| ||||| |||| || ||||| |||||||||||  |||||||||||||||| |||||||||| ||||||||||||||    
T  41575241 aagagaaagtgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctatgtatcat 41575142  T
Q  100 tact 103  Q
    ||||    
T  41575141 tact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 45097732 - 45097841
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| ||||  || | || |||||||||||||| |||||||||| || |||||||||| |||||| ||| ||||||||||     
T  45097732 aagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatcata 45097831  T
Q  101 actcttttta 110  Q
    ||||||||||    
T  45097832 actcttttta 45097841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 13365456 - 13365346
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagg--gtgtctatgtatca 98  Q
    |||||||||||| |||||||||| ||||  ||   || ||||||||||||||||||||||||| |||| |||||||||||||||  |||| |||||||||    
T  13365456 aagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagggtgtgtttatgtatca 13365357  T
Q  99 ttactcttttt 109  Q
    | |||||||||    
T  13365356 taactcttttt 13365346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 17820001 - 17820104
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||| |||| ||||| ||| ||||||| || || ||||||||||||||||||||||||| ||||||||||||| |||  | ||||||||||||||     
T  17820001 aagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatgtatcata 17820100  T
Q  101 actc 104  Q
    ||||    
T  17820101 actc 17820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 38732457 - 38732354
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| ||||  |||| || ||||||||||||||||||||||||| || ||||||| ||  ||||||||| ||||||||||     
T  38732457 aagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcata 38732358  T
Q  101 actc 104  Q
    ||||    
T  38732357 actc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 43490224 - 43490121
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||| ||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||     
T  43490224 aagataaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcata 43490125  T
Q  101 actc 104  Q
    ||||    
T  43490124 actc 43490121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2997484 - 2997569
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggt 86  Q
    |||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  2997484 aagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 2997569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 3440082 - 3439985
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatca 98  Q
    |||||||| |||||||||||||| ||||||| |  || ||| ||||||||||||||||||| | | ||||||||||| ||||||||||||| ||||||    
T  3440082 aagagaaaatgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 17823853 - 17823782
Alignment:
Q  35 tacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactctt 106  Q
    ||||||||||||||||||||||||||  | |  |||||||||| |||||| ||| |||||||||||||||||    
T  17823853 tacgtgtcagatttttgtgtgggtgttcaggaatgtattgccacctaaggatgtatatgtatcattactctt 17823782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 3738043 - 3737986
Alignment:
Q  4 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtc 61  Q
    ||||| |||||||||||||| ||||| |||| || |||||||||||||||||||||||    
T  3738043 agaaaatgtgcttgtgcggggtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3154246 - 3154193
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgt 54  Q
    |||||||| |||| ||| |||||||||| ||||| |||||||||||||||||||    
T  3154246 aagagaaactgtgtttgggcgggatccatgtgaccacgtgtcagatttttgtgt 3154193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 15428775 - 15428842
Alignment:
Q  39 tgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactctt 106  Q
    ||||||||||||||||| |||| || |||||||| ||||  ||||| ||| |||||||||| ||||||    
T  15428775 tgtcagatttttgtgtgagtgttaaggggtgtatggccacataaggatgtttatgtatcataactctt 15428842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 16096873 - 16096913
Alignment:
Q  36 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 77  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  16096873 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 16096913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 42849834 - 42849794
Alignment:
Q  36 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 77  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  42849834 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 42849794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 2e-47; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 2740377 - 2740273
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  2740377 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatt 2740278  T
Q  101 actct 105  Q
    |||||    
T  2740277 actct 2740273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 18520881 - 18520989
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18520881 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 18520980  T
Q  101 actcttttt 109  Q
    | |||||||    
T  18520981 attcttttt 18520989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 33149635 - 33149738
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  33149635 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcatt 33149734  T
Q  101 actc 104  Q
    ||||    
T  33149735 actc 33149738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 14831914 - 14831809
Alignment:
Q  4 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattact 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  14831914 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattact 14831815  T
Q  104 cttttt 109  Q
    | ||||    
T  14831814 catttt 14831809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 36732939 - 36733044
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  36732939 aagagaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcatt 36733038  T
Q  101 actctt 106  Q
    ||||||    
T  36733039 actctt 36733044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 13811755 - 13811648
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||| ||    
T  13811755 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcttt 13811656  T
Q  101 actctttt 108  Q
    ||||||||    
T  13811655 actctttt 13811648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 35785302 - 35785199
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  35785302 aagagaaagtgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcatt 35785203  T
Q  101 actc 104  Q
    ||||    
T  35785202 actc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 40145510 - 40145407
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  40145510 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcatt 40145411  T
Q  101 actc 104  Q
    ||||    
T  40145410 actc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 35943889 - 35943992
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||     
T  35943889 aagagaaagtgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcata 35943988  T
Q  101 actc 104  Q
    ||||    
T  35943989 actc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 42414299 - 42414402
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||    
T  42414299 aagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatcatt 42414398  T
Q  101 actc 104  Q
    ||||    
T  42414399 actc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 28177878 - 28177775
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||| ||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||     
T  28177878 aagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcata 28177779  T
Q  101 actc 104  Q
    ||||    
T  28177778 actc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 215 - 329
Target Start/End: Original strand, 4866635 - 4866751
Alignment:
Q  215 accaatttaataattgtgtgaatgtgttgaattgtgattgtaggaaatccgaatccattgacaacatggaatggagtagcttgatatattctg--ctcat 312  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| | |||||||| ||  ||| |    
T  4866635 accaatttagtaactgtgtgaatgtgttgaattgtgattgtaggaaatccaaatccaatgacaacatggaatggagtagttggatatattatgttctcgt 4866734  T
Q  313 tatttctgctatgtttg 329  Q
    ||||||| |||||||||    
T  4866735 tatttctactatgtttg 4866751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 31009088 - 31008984
Alignment:
Q  4 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattact 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||  ||||||| || |||||| ||| |||||||||| |||    
T  31009088 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcataact 31008989  T
Q  104 ctttt 108  Q
    |||||    
T  31008988 ctttt 31008984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 36875609 - 36875708
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36875609 aagagaaagtgtgcttgtgcgggatccacgtgacta---------tttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 36875699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 26720619 - 26720516
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||||||||||||| ||| | ||||||||||||||| ||| ||||| |||||||||||||||| |||||| ||||||||||||||     
T  26720619 aagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcata 26720520  T
Q  101 actc 104  Q
    ||||    
T  26720519 actc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 26990368 - 26990265
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||||||||||||| ||| | ||||||||||||||| ||| ||||| |||||||||||||||| |||||| ||||||||||||||     
T  26990368 aagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcata 26990269  T
Q  101 actc 104  Q
    ||||    
T  26990268 actc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 15409607 - 15409712
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||| |||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||  ||||||| || |||||| ||||||||||||||     
T  15409607 aagagagagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcata 15409706  T
Q  101 actctt 106  Q
    ||||||    
T  15409707 actctt 15409712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 4866987 - 4867067
Alignment:
Q  348 aatgtcaatatgttaaatttgatagttgatttatataaataaacatgatttggtttaatgctcttgcaatgatgccttttt 428  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  4866987 aatgtcaatatgttaaatctgatagttgatttatataaataaacataatttggtttaatgctctttcaatgatgtcttttt 4867067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 6679801 - 6679697
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||| |||| ||||||||| |||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||| | ||||||||||||||     
T  6679801 aagagaaaatgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcata 6679702  T
Q  101 actct 105  Q
    |||||    
T  6679701 actct 6679697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 3921262 - 3921368
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||     
T  3921262 aagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcata 3921361  T
Q  101 actcttt 107  Q
    |||||||    
T  3921362 actcttt 3921368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 2252165 - 2252269
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||||     
T  2252165 aagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcata 2252264  T
Q  101 actct 105  Q
    |||||    
T  2252265 actct 2252269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 20073516 - 20073616
Alignment:
Q  4 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattact 103  Q
    ||||||||||||||||| || ||||||||   |||||  |||||||| |||| |||||||||||||||||| ||||||| | ||||||| ||||||||||    
T  20073516 agaaagtgtgcttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatgatgtctatatatcattact 20073615  T
Q  104 c 104  Q
    |    
T  20073616 c 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 13 - 105
Target Start/End: Original strand, 41470425 - 41470517
Alignment:
Q  13 gcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactct 105  Q
    ||||||||||| |||||||||||||||||||||||||| | ||  | | ||||| |||||||||| |||| ||||||||||||| ||||||||    
T  41470425 gcttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtattattactct 41470517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 39688894 - 39688999
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| ||| |||||| | ||  |||| || | ||||||||||||||||||||||| || ||||||||||  ||||||||| ||||||||||     
T  39688894 aagagaaagtgtacttatgcggggttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcata 39688993  T
Q  101 actctt 106  Q
    ||||||    
T  39688994 actctt 39688999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 38296304 - 38296200
Alignment:
Q  3 gagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattac 102  Q
    |||||||||||||||||  ||||||||||  ||||||||| ||||||||||||||| | ||  ||||||||| || |||||   ||||||||||||| ||    
T  38296304 gagaaagtgtgcttgtgttggatccacgtagctacgtgtctgatttttgtgtgggtattaagaggtgtattgacacctaagatagtctatgtatcataac 38296205  T
Q  103 tcttt 107  Q
    |||||    
T  38296204 tcttt 38296200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 6259998 - 6260101
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||| || | | |||| ||||| | |||| ||||||||| |||||||| ||||||||||||| || ||| || ||| |||||||||||    
T  6259998 aagagaaagtgtgcttctgtgaggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcatt 6260097  T
Q  101 actc 104  Q
    ||||    
T  6260098 actc 6260101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 33825321 - 33825424
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||||   | | ||| |||  ||||||||||||||| |||||||||||| | ||||||||||| |||||  |||||||| ||||||    
T  33825321 aagagaaagtgtgcttgtgtaaggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcatt 33825420  T
Q  101 actc 104  Q
    ||||    
T  33825421 actc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 10356698 - 10356639
Alignment:
Q  41 tcagatttttgtgtgggtgtcaaaggg-tgtattgccatctaagggtgtctatgtatcat 99  Q
    ||||||||||||||||||||||| ||| |||||||||| |||||| ||||||||||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcat 10356639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31132447 - 31132392
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgg 56  Q
    |||| ||||| |||||||||||| ||||||||||||| ||||||||||||||||||    
T  31132447 aagaaaaagtatgcttgtgcggggtccacgtgactacttgtcagatttttgtgtgg 31132392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 16328004 - 16327902
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||| |||||||||||||| | | | ||| |||  ||||||||||||||| |||||||||||| || |||||||||| |||||| | | ||| |||||||    
T  16328004 aagaaaaagtgtgcttgtgtgaggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatttatctatcatt 16327905  T
Q  101 act 103  Q
    |||    
T  16327904 act 16327902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 9603916 - 9603811
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||| ||||  ||| ||||  |||| | ||||||||||||||||| ||||| || | |||||||  || |||||| ||| |||||||||||    
T  9603916 aagagaaagtgtgattgtatggggtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtattatcacctaaggatgtatatgtatcatt 9603817  T
Q  101 actctt 106  Q
    ||||||    
T  9603816 actctt 9603811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21370107 - 21370048
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgt 60  Q
    |||||||| |||| ||||||||| |||||||||| || ||||||||||||| ||||||||    
T  21370107 aagagaaaatgtgtttgtgcggggtccacgtgaccacatgtcagatttttgagtgggtgt 21370048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 4813845 - 4813913
Alignment:
Q  346 aaaatgtcaatatgttaaatttgatagttgatttatataa--ataaacatgatttggtttaatgctctt 412  Q
    |||||||||||||||| ||| ||||||||||||||||| |  ||||| ||| ||| |||||||||||||    
T  4813845 aaaatgtcaatatgtttaatatgatagttgatttatatgactataaatatgtttttgtttaatgctctt 4813913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 109
Target Start/End: Complemental strand, 16115273 - 16115245
Alignment:
Q  81 aagggtgtctatgtatcattactcttttt 109  Q
    |||||||||||||||||||||||||||||    
T  16115273 aagggtgtctatgtatcattactcttttt 16115245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 109
Target Start/End: Complemental strand, 33149579 - 33149551
Alignment:
Q  81 aagggtgtctatgtatcattactcttttt 109  Q
    |||||||||||||||||||||||||||||    
T  33149579 aagggtgtctatgtatcattactcttttt 33149551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39557514 - 39557586
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtatt 73  Q
    ||||||||||||| ||||  ||| |||| ||||  ||||||||||||||||||||| ||| ||  ||||||||    
T  39557514 aagagaaagtgtgattgtatggggtccatgtgatcacgtgtcagatttttgtgtggatgttaagaggtgtatt 39557586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 2e-47; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 50052425 - 50052533
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  50052425 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatt 50052524  T
Q  101 actcttttt 109  Q
    |||||||||    
T  50052525 actcttttt 50052533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 6034147 - 6034044
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6034147 aagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 6034048  T
Q  101 actc 104  Q
    ||||    
T  6034047 actc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 48183046 - 48183151
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  48183046 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcatt 48183145  T
Q  101 actctt 106  Q
    ||||||    
T  48183146 actctt 48183151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 480444 - 480552
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  480444 aagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcatt 480543  T
Q  101 actcttttt 109  Q
    |||||||||    
T  480544 actcttttt 480552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 11511459 - 11511562
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11511459 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 11511558  T
Q  101 actc 104  Q
    ||||    
T  11511559 actc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 29234242 - 29234346
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  29234242 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgtatcatt 29234341  T
Q  101 actct 105  Q
    |||||    
T  29234342 actct 29234346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 42044364 - 42044472
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||| |||||||||| ||||||||||||||||||||||    
T  42044364 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcatt 42044463  T
Q  101 actcttttt 109  Q
    |||||||||    
T  42044464 actcttttt 42044472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 41236450 - 41236347
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  41236450 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcatt 41236351  T
Q  101 actc 104  Q
    ||||    
T  41236350 actc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 29239989 - 29239878
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  29239989 aagagaaagtgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcatt 29239890  T
Q  101 actctttttaaa 112  Q
    ||||||| ||||    
T  29239889 actctttataaa 29239878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 24995104 - 24995209
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||| |||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| || |||||||    
T  24995104 aagagaaaatgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcatt 24995203  T
Q  101 actctt 106  Q
    ||||||    
T  24995204 actctt 24995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 3481757 - 3481654
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||    
T  3481757 aagagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcatt 3481658  T
Q  101 actc 104  Q
    ||||    
T  3481657 actc 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 54473530 - 54473633
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||    
T  54473530 aagataaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcatt 54473629  T
Q  101 actc 104  Q
    ||||    
T  54473630 actc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 23608338 - 23608233
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||| ||  | |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||    
T  23608338 aagagaaagtgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcatt 23608239  T
Q  101 actctt 106  Q
    ||||||    
T  23608238 actctt 23608233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 50526171 - 50526271
Alignment:
Q  4 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattact 103  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||    
T  50526171 agaaagcgtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattact 50526270  T
Q  104 c 104  Q
    |    
T  50526271 c 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 31910295 - 31910192
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||| ||| ||| |||||||||||||||||||||||||||| |||||||| || |||||| ||||||||||||||     
T  31910295 aagagaaagtgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcata 31910196  T
Q  101 actc 104  Q
    ||||    
T  31910195 actc 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 40574882 - 40574779
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||| ||||||||| ||  |  ||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||     
T  40574882 aagagaaagtgtgcttgttcgggatccatgtagcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcata 40574783  T
Q  101 actc 104  Q
    ||||    
T  40574782 actc 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 19670713 - 19670830
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| ||||  || | || ||||||||||||||||| ||||||| ||||||||||||| |||||||||| ||||||||||     
T  19670713 aagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcata 19670812  T
Q  101 actctttttaaaaccttt 118  Q
    |||||||| |||| ||||    
T  19670813 actcttttcaaaaacttt 19670830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 29977988 - 29977883
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||| ||| ||||  |||||||||||||||||||||||||||||| || ||||||||||||| ||| || | | |||||||||||    
T  29977988 aagagaaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcatt 29977889  T
Q  101 actctt 106  Q
    ||||||    
T  29977888 actctt 29977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 53352563 - 53352660
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcat 99  Q
    |||||||||| |||||||||||| ||||| | |||||||||||||||||||||| ||||| ||||  ||||||| || |||||||||||||||||||||    
T  53352563 aagagaaagtatgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagggtgtctatgtatcat 53352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41823985 - 41823920
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagg 66  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  41823985 aagagaaagtgtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtgggtgttaaagg 41823920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 55475294 - 55475189
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| ||| ||| || ||||  || | || ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||     
T  55475294 aagagaaagtgtacttatgcagggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcata 55475195  T
Q  101 actctt 106  Q
    ||||||    
T  55475194 actctt 55475189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 47986311 - 47986207
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| ||||  || | || |||||||||||||||||| |||||| || |||||||||| |||||||||| ||||||||||     
T  47986311 aagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcata 47986212  T
Q  101 actct 105  Q
    |||||    
T  47986211 actct 47986207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 50813889 - 50813993
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| | ||  |||| || ||||||||||||||||||||||||| ||||||||| ||| ||||| |||| ||||||||||     
T  50813889 aagagaaagtgtacttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcata 50813988  T
Q  101 actct 105  Q
    |||||    
T  50813989 actct 50813993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 17983740 - 17983825
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggt 86  Q
    |||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  17983740 aagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 17983825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 29547956 - 29548061
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||| ||||||| ||| |||||||||||  || | || ||||||||||||||||||||||||| || |||||||||| |||||| ||| ||||||||||     
T  29547956 aagaaaaagtgtacttatgcgggatccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcata 29548055  T
Q  101 actctt 106  Q
    ||||||    
T  29548056 actctt 29548061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 32767061 - 32766956
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| ||||||| || ||||  || | || |||||||||||||| |||||||||| ||||||||||||| ||||| |||| ||||||||||     
T  32767061 aagagaaagtgtacttgtgcagggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcata 32766962  T
Q  101 actctt 106  Q
    ||||||    
T  32766961 actctt 32766956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 28480267 - 28480369
Alignment:
Q  3 gagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattac 102  Q
    ||||||||||| ||||| ||| ||||| ||||||| ||||||||||||||||| |||| ||   |||||||| || |||||| ||||||||||| || ||    
T  28480267 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataac 28480366  T
Q  103 tct 105  Q
    |||    
T  28480367 tct 28480369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 28481142 - 28481244
Alignment:
Q  3 gagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattac 102  Q
    ||||||||||| ||||| ||| ||||| ||||||| ||||||||||||||||| |||| ||   |||||||| || |||||| ||||||||||| || ||    
T  28481142 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataac 28481241  T
Q  103 tct 105  Q
    |||    
T  28481242 tct 28481244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 28482017 - 28482119
Alignment:
Q  3 gagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattac 102  Q
    ||||||||||| ||||| ||| ||||| ||||||| ||||||||||||||||| |||| ||   |||||||| || |||||| ||||||||||| || ||    
T  28482017 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataac 28482116  T
Q  103 tct 105  Q
    |||    
T  28482117 tct 28482119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 47104612 - 47104542
Alignment:
Q  36 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactctt 106  Q
    |||||||| |||||||||||||||||| || |||||||| ||||||||  ||||||| |||||||||||||    
T  47104612 acgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatatcattactctt 47104542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 48647723 - 48647828
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||| |||||||||||||  |||||||||| |||||| |||||||| ||||||||| ||  |||||||||  | |||||| ||| ||||| ||||     
T  48647723 aagagaaattgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaaggatgtttatgtgtcata 48647822  T
Q  101 actctt 106  Q
    ||||||    
T  48647823 actctt 48647828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 55079749 - 55079814
Alignment:
Q  39 tgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 104  Q
    |||||||||||||| ||||||||||  |||||||||||| |||||||||| |||||||||| ||||    
T  55079749 tgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 8343160 - 8343263
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||| | ||| |||||| ||||  || | || |||||||||||| ||| ||||||||||| |||||||||| |||||| ||| ||||||||||     
T  8343160 aagagaaagtatacttatgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatgtattgccacctaaggatgtttatgtatcata 8343259  T
Q  101 actc 104  Q
    ||||    
T  8343260 actc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 29589737 - 29589831
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtat 96  Q
    |||||||||||| |||||| ||| ||||  || | || | ||||||||||||||||||||||| |||||||||| || |||||||||| |||||||    
T  29589737 aagagaaagtgtacttgtgtggggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtattg-caactaagggtgtttatgtat 29589831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 44536743 - 44536846
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| ||| || ||| || |  |||| || |||||||||||||||||| |||| ||||||||||||||| ||||  |||| ||||||||||     
T  44536743 aagagaaagtgtacttatgtggggtctatatgaccacatgtcagatttttgtgtggatgtc-aagggtgtattgccacctaaaagtgtttatgtatcata 44536841  T
Q  101 actct 105  Q
    |||||    
T  44536842 actct 44536846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 33703245 - 33703307
Alignment:
Q  15 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccat 78  Q
    |||||||||||||| ||  | |||||||||| |||||||||||||| |||||||||||||||||    
T  33703245 ttgtgcgggatccaagttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccat 33703307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 18924530 - 18924595
Alignment:
Q  39 tgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 104  Q
    |||||||||||||||||| | |||| ||||||||||||| |||||||| | |||| ||||| ||||    
T  18924530 tgtcagatttttgtgtggatatcaaggggtgtattgccacctaagggtatttatggatcataactc 18924595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 56300162 - 56300225
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaa 64  Q
    ||||||||||||| |||||| |||| ||  |||| || |||||||||||||||||| |||||||    
T  56300162 aagagaaagtgtgtttgtgcaggattcatatgaccacatgtcagatttttgtgtggatgtcaaa 56300225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 18769182 - 18769141
Alignment:
Q  31 tgactacgtgtcagatttttgtgtgggtgtcaaagggtgtat 72  Q
    |||| ||||||||||||||||||||||||| | |||||||||    
T  18769182 tgaccacgtgtcagatttttgtgtgggtgttagagggtgtat 18769141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 7e-47; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 2582015 - 2581912
Alignment:
Q  4 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattact 103  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2582015 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 2581916  T
Q  104 cttt 107  Q
    ||||    
T  2581915 cttt 2581912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 9474873 - 9474976
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9474873 aagagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 9474972  T
Q  101 actc 104  Q
    ||||    
T  9474973 actc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 47452317 - 47452420
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  47452317 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcatt 47452416  T
Q  101 actc 104  Q
    ||||    
T  47452417 actc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 38595257 - 38595148
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||    
T  38595257 aagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcatt 38595158  T
Q  101 actcttttta 110  Q
    ||||||||||    
T  38595157 actcttttta 38595148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 51898683 - 51898784
Alignment:
Q  4 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattact 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||    
T  51898683 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattact 51898782  T
Q  104 ct 105  Q
    ||    
T  51898783 ct 51898784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 3000422 - 3000319
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  3000422 aagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcatt 3000323  T
Q  101 actc 104  Q
    ||||    
T  3000322 actc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 8346385 - 8346493
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||| ||||||||||||    
T  8346385 aagagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcatt 8346484  T
Q  101 actcttttt 109  Q
    |||||||||    
T  8346485 actcttttt 8346493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 27564732 - 27564835
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  27564732 aagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcatt 27564831  T
Q  101 actc 104  Q
    ||||    
T  27564832 actc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 48716279 - 48716382
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  48716279 aagataaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcatt 48716378  T
Q  101 actc 104  Q
    ||||    
T  48716379 actc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 38632318 - 38632423
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||    
T  38632318 aagaaaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcatt 38632417  T
Q  101 actctt 106  Q
    ||||||    
T  38632418 actctt 38632423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 41758908 - 41758804
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||    
T  41758908 aagagaaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcatt 41758809  T
Q  101 actct 105  Q
    |||||    
T  41758808 actct 41758804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 50630561 - 50630457
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||| |||||||||||||    
T  50630561 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcatt 50630462  T
Q  101 actct 105  Q
    |||||    
T  50630461 actct 50630457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 32813350 - 32813244
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||     
T  32813350 aagagaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcata 32813251  T
Q  101 actcttt 107  Q
    |||||||    
T  32813250 actcttt 32813244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 44548373 - 44548473
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||| | |||||||||||||||    
T  44548373 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgtatcatt 44548472  T
Q  101 a 101  Q
    |    
T  44548473 a 44548473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 43235 - 43132
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |  |||||  |||||||||||||||    
T  43235 aagagaaagtgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcatt 43136  T
Q  101 actc 104  Q
    ||||    
T  43135 actc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 37649297 - 37649198
Alignment:
Q  5 gaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 104  Q
    |||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||| | |||||||||||||||||||    
T  37649297 gaaagtgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcattactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 26440837 - 26440741
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatc 97  Q
    |||||||||||||||| ||||||||||| ||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||| ||||    
T  26440837 aagagaaagtgtgcttatgcgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatc 26440741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 5958997 - 5959106
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| ||||  |||| || |||||||||||||||||||||||||  ||||||||||||  ||||||||| ||||||||||     
T  5958997 aagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcata 5959096  T
Q  101 actcttttta 110  Q
    ||||||||||    
T  5959097 actcttttta 5959106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 26274535 - 26274430
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||| ||||||| ||||||| ||||||||||||||| ||||||||||||| ||||| ||||||| | ||||||||||  |||||||||||||||||||||    
T  26274535 aagaaaaagtgtacttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcatt 26274436  T
Q  101 actctt 106  Q
    | ||||    
T  26274435 attctt 26274430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 11152378 - 11152476
Alignment:
Q  4 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattact 103  Q
    |||||| ||||||||||||| || || |||||||||||||||||||||||||| |||| ||||||||||||||| |||| ||||||||||| ||||||||    
T  11152378 agaaagcgtgcttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaa-ggtgtctatgtttcattact 11152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 50590997 - 50591100
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||     
T  50590997 aagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcata 50591096  T
Q  101 actc 104  Q
    ||||    
T  50591097 actc 50591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13414864 - 13414791
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattg 74  Q
    |||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13414864 aagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 49811524 - 49811629
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||  || |  || ||||||||||||||||||||||| ||||||| ||||||||| || |||||| ||||||| ||||||     
T  49811524 aagagaaagtgtgcttgtgcggagtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcata 49811623  T
Q  101 actctt 106  Q
    ||||||    
T  49811624 actctt 49811629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 23597088 - 23597194
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||| |||||||| ||||||  | || ||||| | ||||||||||||||| ||||||| |||||| ||||||||||| |||| | |||||||||||||||    
T  23597088 aagataaagtgtgtttgtgcaaggtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcatt 23597187  T
Q  101 actcttt 107  Q
    |||||||    
T  23597188 actcttt 23597194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 44454082 - 44453984
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcat 99  Q
    |||| |||||||||||||| ||||||||||| || || |||||||||||||||||||| ||||  | ||||||||||  ||| ||||||||||||||||    
T  44454082 aagaaaaagtgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctatgtatcat 44453984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 45044557 - 45044662
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||| |||| ||||||||| |||| ||| |||| |||||||||||||| ||||||||||| |||||||||||| ||||||   | ||||||||||     
T  45044557 aagagaaaatgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaaggaaatgtatgtatcata 45044656  T
Q  101 actctt 106  Q
    ||||||    
T  45044657 actctt 45044662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 37926435 - 37926539
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| ||||| ||||||||| ||| | ||||||||||||||| ||||||||| ||| | |||||||||| |||| | | ||||||||||||     
T  37926435 aagagaaagtgtacttgtacgggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcata 37926534  T
Q  101 actct 105  Q
    |||||    
T  37926535 actct 37926539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 41608490 - 41608593
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| ||||| |||| ||||  || | || ||||||||||||||||| ||||||| ||||||||||||| |||||| ||| ||||||||||     
T  41608490 aagagaaagtgtacttgtacggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcata 41608589  T
Q  101 actc 104  Q
    ||||    
T  41608590 actc 41608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 48489400 - 48489328
Alignment:
Q  4 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 77  Q
    ||||| ||||||||||||||||||||||||| || |||||||||||||||||| ||||  ||||||||||||||    
T  48489400 agaaaatgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtc-cagggtgtattgcca 48489328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 47748545 - 47748443
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||| | |||||||||||||||  || | || |||||||||||| | |||||||| ||||||||||||||| |||||||| | ||||||||||     
T  47748545 aagagaaagtatacttgtgcgggatccatatggccacatgtcagatttttatatgggtgtc-aagggtgtattgccacctaagggtatttatgtatcata 47748447  T
Q  101 actc 104  Q
    ||||    
T  47748446 actc 47748443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 3302533 - 3302633
Alignment:
Q  4 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattact 103  Q
    |||||||||||||||  ||| ||||  ||| ||||||||||||||||||||||||||| | |  | ||||| || |||||| ||| ||||||||||||||    
T  3302533 agaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcacctaaggatgtatatgtatcattact 3302632  T
Q  104 c 104  Q
    |    
T  3302633 c 3302633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 44334175 - 44334239
Alignment:
Q  9 gtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtatt 73  Q
    ||||| |||||| || |||| ||||||||||||||| ||||||||||| |||||| | |||||||    
T  44334175 gtgtgtttgtgctgggtccatgtgactacgtgtcaggtttttgtgtggatgtcaatgtgtgtatt 44334239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 750301 - 750240
Alignment:
Q  15 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 77  Q
    ||||| ||| |||| || || |||||||||| |||||||||||||| ||||||||||||||||    
T  750301 ttgtgtggggtccatgttaccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 750240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 4401453 - 4401493
Alignment:
Q  36 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 77  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  4401453 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 4401493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 7447950 - 7447990
Alignment:
Q  36 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 77  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  7447950 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 7447990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 50448235 - 50448195
Alignment:
Q  36 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 77  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  50448235 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 50448195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 1e-45; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 7389492 - 7389387
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  7389492 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatt 7389393  T
Q  101 actctt 106  Q
    ||||||    
T  7389392 actctt 7389387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 3434665 - 3434561
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  3434665 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatt 3434566  T
Q  101 actct 105  Q
    |||||    
T  3434565 actct 3434561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 8080380 - 8080485
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  8080380 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 8080479  T
Q  101 actctt 106  Q
    ||||||    
T  8080480 actctt 8080485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 3784098 - 3783998
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||    
T  3784098 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcatt 3783999  T
Q  101 a 101  Q
    |    
T  3783998 a 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 36361910 - 36362014
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  36361910 aagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatcatt 36362009  T
Q  101 actct 105  Q
    |||||    
T  36362010 actct 36362014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 38837320 - 38837208
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||  ||||||||||||||| ||||||||||||||||||||||    
T  38837320 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcatt 38837221  T
Q  101 actctttttaaaa 113  Q
    |||||||| ||||    
T  38837220 actcttttgaaaa 38837208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 4999511 - 4999614
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4999511 aagagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcatt 4999610  T
Q  101 actc 104  Q
    ||||    
T  4999611 actc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 38267143 - 38267040
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||    
T  38267143 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcatt 38267044  T
Q  101 actc 104  Q
    ||||    
T  38267043 actc 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 40957810 - 40957704
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||||||||||||||    
T  40957810 aagagaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcatt 40957711  T
Q  101 actcttt 107  Q
    |||||||    
T  40957710 actcttt 40957704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 19436184 - 19436289
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||| |||||||||||||||    
T  19436184 aagagaaagtgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcatt 19436283  T
Q  101 actctt 106  Q
    ||||||    
T  19436284 actctt 19436289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 35137636 - 35137528
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  35137636 aagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcatt 35137537  T
Q  101 actcttttt 109  Q
    |||| ||||    
T  35137536 actcatttt 35137528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 36362129 - 36362025
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  36362129 aagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcatt 36362030  T
Q  101 actct 105  Q
    |||||    
T  36362029 actct 36362025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 19329945 - 19329842
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  19329945 aagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcatt 19329846  T
Q  101 actc 104  Q
    ||||    
T  19329845 actc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 32951490 - 32951592
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||| ||||| ||||||| |||||||| ||||||||||||||||    
T  32951490 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcatt 32951589  T
Q  101 act 103  Q
    |||    
T  32951590 act 32951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 3694470 - 3694370
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||| || |||||||||| ||| |||||||    
T  3694470 aagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcatt 3694371  T
Q  101 a 101  Q
    |    
T  3694370 a 3694370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 8238316 - 8238203
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatcta-agggtgtctatgtatcat 99  Q
    |||||||||||| |||||||||| ||||  ||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||    
T  8238316 aagagaaagtgtacttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcat 8238217  T
Q  100 tactctttttaaaa 113  Q
     |||| ||||||||    
T  8238216 aactcattttaaaa 8238203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 35522979 - 35522881
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcat 99  Q
    ||||||||||||||||||||||||||||  || | ||||||||||||||||||||||||| ||| ||||||||||||  ||||| ||||||||||||||    
T  35522979 aagagaaagtgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 38044300 - 38044195
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| ||||  || |||| |||||||||||||||||| |||||| ||||||||||||| |||||||||| ||||||||||     
T  38044300 aagagaaagtgtacttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcata 38044201  T
Q  101 actctt 106  Q
    ||||||    
T  38044200 actctt 38044195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 21234504 - 21234401
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||| |||||||||||||| | || ||| |||||||||| ||||||||||| |||||||||||||||||| || |||||| ||||||||||||||     
T  21234504 aagagaaaatgtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcata 21234405  T
Q  101 actc 104  Q
    ||||    
T  21234404 actc 21234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 46374808 - 46374902
Alignment:
Q  10 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 104  Q
    |||||||||||||| |||| ||| | ||||||||||||||||||||||||| ||||||||| |||||| |||||| |||||||||||||| ||||    
T  46374808 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 36208276 - 36208171
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||| ||||||||||| || |||||||||| || |||||| |||||||||||||||||| |  |||||| ||| |||||||||||||||||||||     
T  36208276 aagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtctatgtatcata 36208177  T
Q  101 actctt 106  Q
    ||||||    
T  36208176 actctt 36208171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 22343464 - 22343360
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| ||||  ||   || ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||     
T  22343464 aagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcata 22343365  T
Q  101 actct 105  Q
    |||||    
T  22343364 actct 22343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 41915844 - 41915740
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| ||||  || | || |||||||||||||||| |||||||| ||||||||||||| |||||||||| ||||||||||     
T  41915844 aagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcata 41915745  T
Q  101 actct 105  Q
    |||||    
T  41915744 actct 41915740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 11044281 - 11044185
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| ||||||||||||||||||||          |||||||||||| |||||||||| ||||||||||||||||||||||    
T  11044281 aagagaaagtgtacttgtgcggggtccacgtgactacgtgtcag----------gggtgtcaaaggatgtattgccacctaagggtgtctatgtatcatt 11044192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 18207282 - 18207176
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||| ||| | |||||| | |||||| |||||||||| ||||||||||  |||||||||||| |||||| ||||||||||||||     
T  18207282 aagagaaagtgtgcttgtgtggggttcacgtgcc-acgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcata 18207184  T
Q  101 actctttt 108  Q
    ||||||||    
T  18207183 actctttt 18207176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 35468852 - 35468960
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||| |||||| || ||||| ||   || | | |||||||| ||||||||||||| | ||||||||||||||||| |||||||||||||||    
T  35468852 aagagaaagtgtgtttgtgcagggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcatt 35468951  T
Q  101 actcttttt 109  Q
    |||||||||    
T  35468952 actcttttt 35468960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 10343597 - 10343666
Alignment:
Q  38 gtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactcttt 107  Q
    ||||||||||||||||||||||||||   ||||||| ||| |||||||||||||||||||||||||||||    
T  10343597 gtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcattactcttt 10343666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 46033798 - 46033902
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||| | |||||||||||  | || ||||| ||||||||||||||| ||||||||| |||||||||||||||| |||||  | ||||||||||||     
T  46033798 aagagaaaatatgcttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcata 46033897  T
Q  101 actct 105  Q
    |||||    
T  46033898 actct 46033902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 39255921 - 39256023
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||| ||  |||||||| | ||||||||||||||||| ||||| ||||  |||||||||||| |||||| ||||||||||||||     
T  39255921 aagagaaagtgttcttgtgtggagtccacgtgcc-acgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcata 39256019  T
Q  101 actc 104  Q
    ||||    
T  39256020 actc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 40846110 - 40846213
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||  ||||||||| ||||  | ||||| ||| |||||||||||||| |||||| ||||||||||||| |||||| ||| ||||||||||     
T  40846110 aagagaaagtgtatttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcata 40846209  T
Q  101 actc 104  Q
    ||||    
T  40846210 actc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 41423785 - 41423682
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||| | ||||||| ||||||| ||||||| || ||||||||||||||||  |||||||  |||||||| |||||||| | ||||||||||||||     
T  41423785 aagagaaaatatgcttgtacgggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtctatgtatcata 41423686  T
Q  101 actc 104  Q
    ||||    
T  41423685 actc 41423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 7728006 - 7727901
Alignment:
Q  4 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattact 103  Q
    ||||||||| |||||||||| ||||  |||| || |||||||||||| ||||  ||||||  |||||||| ||| |||||||||| |||||||||| |||    
T  7728006 agaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtttatgtatcataact 7727907  T
Q  104 cttttt 109  Q
    ||||||    
T  7727906 cttttt 7727901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16374821 - 16374894
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattg 74  Q
    ||||||| ||||||||||| | |||||||||||| ||||||||||||||||||||| |||||| || |||||||    
T  16374821 aagagaatgtgtgcttgtgtgagatccacgtgaccacgtgtcagatttttgtgtggatgtcaagggatgtattg 16374894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 31735980 - 31735884
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||||||||||||| ||| | ||||||       |||||||||||| |||| ||||||||||| |||||| ||||||||||||||     
T  31735980 aagagaaagtgtgcttgtgcgggatccatgtggccacgtgt-------ttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcata 31735888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 32564423 - 32564526
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||  ||||||||| ||||  |  | || ||||||||||||||||||||||||| ||||||||||||| |||||  ||| ||||||||||     
T  32564423 aagagaaagtgtatttgtgcggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcata 32564522  T
Q  101 actc 104  Q
    ||||    
T  32564523 actc 32564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 26296747 - 26296643
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||| || ||||||||||| ||||  || | |||| |||||||||| ||||| ||| ||||||| ||||| || |||||| ||||||||||||||     
T  26296747 aagagaaaatgcgcttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcata 26296648  T
Q  101 actct 105  Q
    |||||    
T  26296647 actct 26296643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 27744307 - 27744375
Alignment:
Q  2 agagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgt 70  Q
    ||||||| ||||||| || |||||||||||| | || |||||||||||||||||||| |||||||||||    
T  27744307 agagaaaatgtgcttatgagggatccacgtggccacatgtcagatttttgtgtgggtatcaaagggtgt 27744375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 2318240 - 2318338
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcat 99  Q
    |||||||||| ||||| ||  || |||||||||| ||  ||||||||||||||||||||||||  ||||| |||||| ||| || |||  |||||||||    
T  2318240 aagagaaagtatgcttatgtcgggtccacgtgaccacacgtcagatttttgtgtgggtgtcaagaggtgtcttgccacctatggttgttaatgtatcat 2318338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 45223111 - 45223037
Alignment:
Q  35 tacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactcttttt 109  Q
    |||||||||||||||||||| | |||  |||  |||||||||| |||||| ||| ||| ||||||||||||||||    
T  45223111 tacgtgtcagatttttgtgtagatgttcaagaatgtattgccacctaaggatgtatatatatcattactcttttt 45223037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 32029792 - 32029752
Alignment:
Q  36 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 77  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  32029792 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 32029752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 2e-44; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 12831150 - 12831047
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  12831150 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcatt 12831051  T
Q  101 actc 104  Q
    ||||    
T  12831050 actc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 15197436 - 15197333
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  15197436 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcatt 15197337  T
Q  101 actc 104  Q
    ||||    
T  15197336 actc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 34012293 - 34012396
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  34012293 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcatt 34012392  T
Q  101 actc 104  Q
    ||||    
T  34012393 actc 34012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 504118 - 504227
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  504118 aagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcatt 504217  T
Q  101 actcttttta 110  Q
    |||| |||||    
T  504218 actcatttta 504227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 14548025 - 14547920
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||    
T  14548025 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatcttt 14547926  T
Q  101 actctt 106  Q
    ||||||    
T  14547925 actctt 14547920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 37038579 - 37038478
Alignment:
Q  4 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattact 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||    
T  37038579 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattact 37038480  T
Q  104 ct 105  Q
    ||    
T  37038479 ct 37038478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 5957933 - 5957825
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||    
T  5957933 aagagaaagtgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcatt 5957834  T
Q  101 actcttttt 109  Q
    ||| |||||    
T  5957833 acttttttt 5957825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 1179937 - 1180040
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  1179937 aagagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcatt 1180036  T
Q  101 actc 104  Q
    ||||    
T  1180037 actc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 23122594 - 23122697
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  23122594 aagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcatt 23122693  T
Q  101 actc 104  Q
    ||||    
T  23122694 actc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 40423940 - 40424043
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||    
T  40423940 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcatt 40424039  T
Q  101 actc 104  Q
    ||||    
T  40424040 actc 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 43414578 - 43414687
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||     
T  43414578 aagagaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcata 43414677  T
Q  101 actcttttta 110  Q
    |||| |||||    
T  43414678 actcatttta 43414687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 10284628 - 10284734
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| ||  ||||||||||||||||||||     
T  10284628 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcata 10284727  T
Q  101 actcttt 107  Q
    |||||||    
T  10284728 actcttt 10284734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 44507084 - 44507188
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||| |||| ||||||| ||| ||||||||||||||||||||||    
T  44507084 aagagaaagtatgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcatt 44507183  T
Q  101 actct 105  Q
    |||||    
T  44507184 actct 44507188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 10621084 - 10621182
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcat 99  Q
    |||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||    
T  10621084 aagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 15048179 - 15048281
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||| ||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||     
T  15048179 aagagaaagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgt-ggtgtcaaagggtgtattgccacctaaggatgtctatgtatcata 15048277  T
Q  101 actc 104  Q
    ||||    
T  15048278 actc 15048281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 8841429 - 8841513
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaaggg 85  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||    
T  8841429 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaaggg 8841513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 16383480 - 16383372
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||     
T  16383480 aagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcata 16383381  T
Q  101 actcttttt 109  Q
    |||||||||    
T  16383380 actcttttt 16383372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 9122288 - 9122196
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||          ||||||||||| ||||||||||||||||||||||    
T  9122288 aagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgg----------gtgtattgccacctaagggtgtctatgtatcatt 9122199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 4854860 - 4854965
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||||| || |||| ||| | || | |||||||||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||    
T  4854860 aagagaaagtgtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcatt 4854959  T
Q  101 actctt 106  Q
    ||||||    
T  4854960 actctt 4854965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 34307319 - 34307214
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| | ||  || | || ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||     
T  34307319 aagagaaagtgtacttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcata 34307220  T
Q  101 actctt 106  Q
    ||||||    
T  34307219 actctt 34307214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 15258926 - 15259031
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||| ||||||||||| || |||||||||| || |||||||||||| ||||| |||| | || |||||||||||||||| || ||||||||||||     
T  15258926 aagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatctatgtatcata 15259025  T
Q  101 actctt 106  Q
    ||||||    
T  15259026 actctt 15259031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 24307790 - 24307895
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| ||||  || | || | ||||||||||||||||||||||| || |||||||||| |||||||||| ||||||||||     
T  24307790 aagagaaagtgtacttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcata 24307889  T
Q  101 actctt 106  Q
    ||||||    
T  24307890 actctt 24307895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 42221618 - 42221513
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||  ||| ||||  ||| ||||||||||||||||||||||||||| | |  ||||||| || |||||| ||| |||||||||||    
T  42221618 aagagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcatt 42221519  T
Q  101 actctt 106  Q
    ||||||    
T  42221518 actctt 42221513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 16056398 - 16056506
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| || ||||||| ||  ||||| ||| ||||||||||     
T  16056398 aagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcata 16056497  T
Q  101 actcttttt 109  Q
    |||||||||    
T  16056498 actcttttt 16056506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 20074966 - 20075034
Alignment:
Q  36 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 104  Q
    |||||||| |||||| |||||||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  20074966 acgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcattactc 20075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 24307692 - 24307624
Alignment:
Q  41 tcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactcttttt 109  Q
    ||||||||||||||||||||||| || |||||||||| |||||||||| |||||||||| |||||||||    
T  24307692 tcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactcttttt 24307624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 30479471 - 30479579
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||| | ||||  |  | || |||||||||||| ||||| |||||||||||||||||||| |||||||||| ||||||||||     
T  30479471 aagagaaagtgtacttgtgcgaggtccatatagccacatgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcata 30479570  T
Q  101 actcttttt 109  Q
    |||| ||||    
T  30479571 actcctttt 30479579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 32032827 - 32032724
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| ||||||| |||||||  || | || |||||||||||||||||| |||| |||| |||||||||| |||||||||| ||||||||||     
T  32032827 aagagaaagtgtacttgtgcaggatccatatggccacatgtcagatttttgtgtggatgtc-aaggatgtattgccacctaagggtgtttatgtatcata 32032729  T
Q  101 actct 105  Q
    |||||    
T  32032728 actct 32032724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 17443928 - 17443824
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||  ||||| ||| ||||| ||||||| ||||||||||||||||| |||| ||   |||||||| || |||||| ||||||||||||||     
T  17443928 aagagaaagtgtctttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcata 17443829  T
Q  101 actct 105  Q
    |||||    
T  17443828 actct 17443824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 14055613 - 14055692
Alignment:
Q  25 tccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 104  Q
    ||||||||||||| ||| |||||||||||||| |||||| | |||||||| || ||||||||||| ||||||||| ||||    
T  14055613 tccacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 38229531 - 38229424
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||| ||||||||| | | ||||||||||| || ||||||||||||||||||||||| | | | ||||||||| ||||| ||||  |||||||||     
T  38229531 aagagaaaatgtgcttgtacagaatccacgtgaccacatgtcagatttttgtgtgggtgtc-aggagcgtattgccacctaagagtgttcatgtatcata 38229433  T
Q  101 actcttttt 109  Q
    |||| ||||    
T  38229432 actcatttt 38229424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 2547100 - 2547161
Alignment:
Q  15 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 77  Q
    ||||| |||||||| ||  | |||||||||| |||||||||||||| ||||||||||||||||    
T  2547100 ttgtgtgggatccaagttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 2547161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 29705466 - 29705527
Alignment:
Q  15 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 77  Q
    ||||||||| |||| ||  | |||||||||| |||||||||||||| ||||||||||||||||    
T  29705466 ttgtgcggggtccaagttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 29705527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 109
Target Start/End: Complemental strand, 34012237 - 34012209
Alignment:
Q  81 aagggtgtctatgtatcattactcttttt 109  Q
    |||||||||||||||||||||||||||||    
T  34012237 aagggtgtctatgtatcattactcttttt 34012209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 32869781 - 32869678
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  32869781 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcttt 32869682  T
Q  101 actc 104  Q
    ||||    
T  32869681 actc 32869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 22880655 - 22880755
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22880655 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 22880754  T
Q  101 a 101  Q
    |    
T  22880755 a 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 11427721 - 11427615
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatcta--agggtgtctatgtatca 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||  |||||||||||||||||    
T  11427721 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatca 11427622  T
Q  99 ttactct 105  Q
    |||||||    
T  11427621 ttactct 11427615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 17598657 - 17598549
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||    
T  17598657 aagagaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcatt 17598558  T
Q  101 actcttttt 109  Q
    |||| ||||    
T  17598557 actcatttt 17598549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 29857930 - 29857827
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  29857930 aagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcatt 29857831  T
Q  101 actc 104  Q
    ||||    
T  29857830 actc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 6209462 - 6209568
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||| ||||||| |||||||||||||||| |||||||||||||| ||||||||  ||||||||||| ||||||||||||||||||||||    
T  6209462 aagagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtatcatt 6209561  T
Q  101 actcttt 107  Q
    |||||||    
T  6209562 actcttt 6209568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 23128124 - 23128236
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||  ||| ||||||||| |||||||    
T  23128124 aagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgtctatatatcatt 23128223  T
Q  101 actctttttaaaa 113  Q
    | |||||| ||||    
T  23128224 attcttttaaaaa 23128236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 31109397 - 31109500
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| ||| |||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  ||||||    
T  31109397 aagagaaagtgtacttttgcggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctattaatcatt 31109496  T
Q  101 actc 104  Q
    ||||    
T  31109497 actc 31109500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 31976351 - 31976247
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||| | || ||||| ||||||||||||||||||||||||| ||||||| |||||||| |||||| ||||||||||||||     
T  31976351 aagagaaagtgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcata 31976252  T
Q  101 actct 105  Q
    |||||    
T  31976251 actct 31976247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 15832680 - 15832568
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||| |||  |||||| |||||||||||||||||||||| |||||||||||||||||||| | | ||||| || |||| |||||||||||||||||    
T  15832680 aagagaaaatgtatttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatcatt 15832581  T
Q  101 actctttttaaaa 113  Q
    |||||||| ||||    
T  15832580 actcttttgaaaa 15832568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 30341357 - 30341463
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||     
T  30341357 aagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcata 30341456  T
Q  101 actcttt 107  Q
    |||||||    
T  30341457 actcttt 30341463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 15990039 - 15990144
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||     
T  15990039 aagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcata 15990138  T
Q  101 actctt 106  Q
    ||||||    
T  15990139 actctt 15990144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 31110758 - 31110863
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||||| || |||| |||  ||||||||||||||||||| |  |||||||||||||||||||| |||||| ||||||||||||||     
T  31110758 aagagaaagtgtgcttgtgcagggtccatgtggttacgtgtcagatttttgtgag--tgtcaaagggtgtattgccacctaaggatgtctatgtatcata 31110855  T
Q  101 actctttt 108  Q
    ||||||||    
T  31110856 actctttt 31110863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 15508021 - 15508124
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||     
T  15508021 aagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcata 15508120  T
Q  101 actc 104  Q
    ||||    
T  15508121 actc 15508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 946479 - 946370
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||| | |||||||  ||||||||| |||||||||||||| || ||||||||||||||||||  || |||||| |||||||||||| ||    
T  946479 aagagaaagtgtgctagagcgggatttacgtgactaggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatcgtt 946380  T
Q  101 actcttttta 110  Q
    ||| ||||||    
T  946379 acttttttta 946370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 28536485 - 28536582
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||| ||| ||||| ||||  ||||||||||||||||||||||||||| || |||||||||| |||||| ||| |||||||||||    
T  28536485 aagagaaagtgtgcttgtgtggggtccacatgac--cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcatt 28536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 31953027 - 31953130
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||| ||||| | | ||||| |||  || |||||||||||| |||||||||||| ||||||||||||| |||||| ||||||| |||||||    
T  31953027 aagagaaagtgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcatt 31953126  T
Q  101 actc 104  Q
    ||||    
T  31953127 actc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 12732585 - 12732477
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||| ||||||| || ||||||||| |  | |||||||||||||||||||||||||||| |  | ||||||||  ||||  |||||||||||||||    
T  12732585 aagagaaaatgtgcttatgtgggatccacatagccacgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaagaatgtctatgtatcatt 12732486  T
Q  101 actcttttt 109  Q
    |||||||||    
T  12732485 actcttttt 12732477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 4231651 - 4231548
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||| |||||||||| ||||  || | |||||||||||||||||||||||| ||| ||||||||||||| |||| | ||| |||| |||||     
T  4231651 aagagaaagtgtacttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcata 4231552  T
Q  101 actc 104  Q
    ||||    
T  4231551 actc 4231548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9379709 - 9379807
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcat 99  Q
    |||||||| |||| ||||| | ||||||| || | |||||||| |||||||| |||||||||| || ||||||| ||||||||| ||||||||||||||    
T  9379709 aagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtctatgtatcat 9379807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 22422053 - 22422119
Alignment:
Q  39 tgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactct 105  Q
    ||||||| |||||| || |||||||  | | |||||||| |||||| ||||||||||||||||||||    
T  22422053 tgtcagaattttgtatgagtgtcaagagatctattgccacctaaggatgtctatgtatcattactct 22422119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 7367674 - 7367714
Alignment:
Q  36 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 77  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  7367674 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 7367714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 26669984 - 26669944
Alignment:
Q  36 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 77  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  26669984 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 26669944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 109
Target Start/End: Original strand, 32869837 - 32869865
Alignment:
Q  81 aagggtgtctatgtatcattactcttttt 109  Q
    |||||||||||||||||||||||||||||    
T  32869837 aagggtgtctatgtatcattactcttttt 32869865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 4132 - 4029
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  4132 aagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcatt 4033  T
Q  101 actc 104  Q
    ||||    
T  4032 actc 4029  T

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Target: scaffold0321 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 10106 - 10218
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||||||||||||| || | |||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||| ||||||||||||||||     
T  10106 aagagaaagtgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcata 10205  T
Q  101 actctttttaaaa 113  Q
    |||||||||||||    
T  10206 actctttttaaaa 10218  T

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Target: scaffold1268 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 926 - 1029
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| |||||||||||||||| |||| | |||||||||||||||    
T  926 aagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcatt 1025  T
Q  101 actc 104  Q
    ||||    
T  1026 actc 1029  T

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Target: scaffold1267 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 926 - 1029
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| |||||||||||||||| |||| | |||||||||||||||    
T  926 aagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcatt 1025  T
Q  101 actc 104  Q
    ||||    
T  1026 actc 1029  T

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Target: scaffold0018 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 152601 - 152514
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgt 88  Q
    ||||||||||||  ||||||||||||||  |||| || ||||||||||||||||||||||||| ||||||||||||| | ||||||||    
T  152601 aagagaaagtgtatttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagggtgt 152514  T

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Target: scaffold0110 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 8860 - 8963
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 100  Q
    |||||||| ||| |||||| ||| |||||||||||| |||||| |||||||||| | |||||||  |||||||| ||  ||||| ||||||| ||||||     
T  8860 aagagaaaatgtacttgtgtggggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaaggatgtctatatatcata 8959  T
Q  101 actc 104  Q
    ||||    
T  8960 actc 8963  T

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Target: scaffold0316 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 17157 - 17083
Alignment:
Q  1 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc 75  Q
    |||||||| |||||||||||||| |||| ||||| || |||||||||||||||||| |||| | || ||||||||    
T  17157 aagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtcgagggatgtattgc 17083  T

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Target: scaffold0119 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 810 - 850
Alignment:
Q  36 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 77  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  810 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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