View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4035_high_24 (Length: 264)
Name: NF4035_high_24
Description: NF4035
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4035_high_24 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 8998891 - 8999154
Alignment:
| Q |
1 |
ccttctacccaattggttatttgtgtctggtgtcccttcaaacaataaaacaaacgaaatcagttttgtcctttttcttttctaccacgttgttctttta |
100 |
Q |
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| T |
8998891 |
ccttctacccaattggttatttgtgtctggtgtcccttcaaacaataaaacaaacgaaatcagttttgtcctttttcttttctaccacgttgttctttta |
8998990 |
T |
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| Q |
101 |
cataatttactccctcctctttacaataaattacacatttgtgaaaggnnnnnnnnnnnnnnnnnnntaacacatttgtaaaagaaatttttctcagaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| ||| |
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| T |
8998991 |
tataatttactccctcctctttacaataaattacacatttgtgaaagaaaaaaaaactaccaaaaaataacacatttgtaaaagaaaaaattgtcaaaaa |
8999090 |
T |
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| Q |
201 |
atgaataatgatttttaatttttgatggaatattaacaacatatatatgtttaatagtaccctc |
264 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
8999091 |
atgaataatgatttttaatttttaatggaatattaacaacatatatatgtttaatagtaccctc |
8999154 |
T |
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