View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4035_high_35 (Length: 246)
Name: NF4035_high_35
Description: NF4035
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4035_high_35 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 7710335 - 7710090
Alignment:
| Q |
1 |
ttgttcaagaattttcaatgttactcttaattctctattatcatggtttaaattaatttgcaaaataattattaattttctataacattgcaaaatcttc |
100 |
Q |
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| T |
7710335 |
ttgttctagaattttcaatgttactcttaattctctattatcatggtttaaattaatttgcaaaataattattaattttctataacattgcaaaatcttc |
7710236 |
T |
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| Q |
101 |
ataggttataccaaaagatgtaaatgaagacataatctataattttttcaatgaccattggaaaatcatcagatggatagctcttggagaatttatatta |
200 |
Q |
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| T |
7710235 |
ttaggttataccaaaagatgtaaatgaagacataatctataattttttcaatgaccattggaaaatcttcagatggatagctcttggagaatttatatta |
7710136 |
T |
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| Q |
201 |
caggtaacattagatacacaatctattgaatagagaaagcaaacat |
246 |
Q |
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| T |
7710135 |
caggtaacattagatacacaatctattgaatagagaaagcaaacat |
7710090 |
T |
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