View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4035_low_37 (Length: 243)
Name: NF4035_low_37
Description: NF4035
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4035_low_37 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 17 - 243
Target Start/End: Original strand, 1908344 - 1908566
Alignment:
| Q |
17 |
aattggctctatttgattttaatttggttaatcatacaaccacaaaaagaaaaactatgaatgaatgataaagagaaaagtatcttcatatatatacctc |
116 |
Q |
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| T |
1908344 |
aattggctctatttgattttaatttggttaatcaaacaacaacaaaaagaaaaactatgaatgaatgataaagagaaaagtatcttcatat----acctc |
1908439 |
T |
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| Q |
117 |
aagaagtgctatctgagattcccaatacaaagtcctttgtgttaggtattcctcagagtcattgctttgttcagacaagcataggtcctcaagaggggca |
216 |
Q |
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| T |
1908440 |
aagaagtgctatctgagattcccaatacaaagtcctttgtgttaggtattcctcagagtcattgctttgttcagacaagcataggtcctcaagaggggca |
1908539 |
T |
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| Q |
217 |
tgtagctcagattcaatatccataaac |
243 |
Q |
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| T |
1908540 |
tgtagctcagattcaatatccataaac |
1908566 |
T |
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