View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4038_low_4 (Length: 583)

Name: NF4038_low_4
Description: NF4038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4038_low_4
NF4038_low_4
[»] chr3 (42 HSPs)
chr3 (366-481)||(19647499-19647614)
chr3 (522-564)||(19647416-19647458)
chr3 (99-141)||(7274656-7274698)
chr3 (96-141)||(40410712-40410757)
chr3 (98-141)||(34521598-34521641)
chr3 (96-139)||(35580292-35580335)
chr3 (99-141)||(4846937-4846979)
chr3 (99-141)||(8846417-8846459)
chr3 (99-141)||(34521269-34521311)
chr3 (99-141)||(45871700-45871742)
chr3 (99-141)||(54107672-54107714)
chr3 (99-141)||(54108461-54108503)
chr3 (96-141)||(12123420-12123465)
chr3 (96-141)||(14353046-14353091)
chr3 (96-141)||(41208401-41208446)
chr3 (101-141)||(35753408-35753448)
chr3 (99-139)||(44069126-44069166)
chr3 (99-138)||(12123093-12123132)
chr3 (99-137)||(8846079-8846117)
chr3 (96-138)||(21918497-21918539)
chr3 (99-141)||(26332322-26332364)
chr3 (99-141)||(31513866-31513908)
chr3 (99-141)||(31514203-31514245)
chr3 (99-141)||(33812884-33812926)
chr3 (99-141)||(41208741-41208783)
chr3 (99-141)||(44069464-44069506)
chr3 (99-141)||(45171408-45171450)
chr3 (96-141)||(5348579-5348624)
chr3 (99-140)||(14353389-14353430)
chr3 (96-137)||(33812724-33812765)
chr3 (96-141)||(53678433-53678478)
chr3 (96-141)||(54081284-54081329)
chr3 (97-137)||(2829408-2829448)
chr3 (99-139)||(13867007-13867047)
chr3 (97-141)||(17274117-17274161)
chr3 (99-139)||(41997822-41997862)
chr3 (99-139)||(43527026-43527066)
chr3 (99-139)||(44316630-44316670)
chr3 (99-139)||(49529163-49529203)
chr3 (99-139)||(51170724-51170764)
chr3 (99-139)||(52268446-52268486)
chr3 (101-137)||(53841371-53841407)
[»] chr5 (36 HSPs)
chr5 (415-465)||(29742025-29742075)
chr5 (96-141)||(5460287-5460332)
chr5 (418-465)||(28663522-28663569)
chr5 (99-141)||(7399080-7399122)
chr5 (99-141)||(8418525-8418567)
chr5 (99-141)||(29023940-29023982)
chr5 (99-141)||(35263497-35263539)
chr5 (96-141)||(19205284-19205329)
chr5 (416-464)||(21154243-21154291)
chr5 (416-464)||(21161378-21161426)
chr5 (96-139)||(15670494-15670537)
chr5 (99-138)||(19204947-19204986)
chr5 (96-139)||(31909273-31909316)
chr5 (99-141)||(3878484-3878526)
chr5 (99-141)||(5460191-5460233)
chr5 (101-139)||(7210461-7210499)
chr5 (99-141)||(10656097-10656139)
chr5 (99-141)||(10656435-10656477)
chr5 (99-141)||(12593459-12593501)
chr5 (96-138)||(19615422-19615464)
chr5 (429-471)||(25590181-25590223)
chr5 (99-141)||(32272181-32272223)
chr5 (99-141)||(33763249-33763290)
chr5 (99-137)||(35263839-35263877)
chr5 (99-141)||(36752242-36752284)
chr5 (99-141)||(42710691-42710733)
chr5 (100-141)||(5087811-5087852)
chr5 (96-141)||(15476266-15476311)
chr5 (100-137)||(39706396-39706433)
chr5 (99-139)||(9693261-9693301)
chr5 (99-139)||(21750813-21750853)
chr5 (99-139)||(33699278-33699318)
chr5 (99-135)||(40589057-40589093)
chr5 (99-139)||(40589397-40589437)
chr5 (99-135)||(40589660-40589696)
chr5 (99-139)||(40590000-40590040)
[»] chr8 (33 HSPs)
chr8 (423-471)||(28350467-28350515)
chr8 (415-470)||(22274954-22275009)
chr8 (96-141)||(23244856-23244901)
chr8 (96-139)||(39240362-39240405)
chr8 (96-138)||(6843495-6843537)
chr8 (99-141)||(7041965-7042007)
chr8 (99-141)||(11198546-11198588)
chr8 (99-141)||(24456737-24456779)
chr8 (99-141)||(37393818-37393860)
chr8 (99-141)||(40040165-40040207)
chr8 (96-141)||(758344-758389)
chr8 (99-140)||(24456994-24457035)
chr8 (96-141)||(26736125-26736170)
chr8 (99-139)||(35224110-35224150)
chr8 (96-139)||(37393477-37393520)
chr8 (99-138)||(39240033-39240072)
chr8 (99-137)||(119120-119158)
chr8 (99-141)||(1826132-1826174)
chr8 (99-141)||(1860577-1860619)
chr8 (99-141)||(5417154-5417196)
chr8 (96-130)||(8654288-8654322)
chr8 (99-137)||(16645893-16645931)
chr8 (99-141)||(18622088-18622130)
chr8 (99-137)||(30872786-30872824)
chr8 (99-141)||(35223777-35223819)
chr8 (96-138)||(39912263-39912305)
chr8 (99-141)||(40032429-40032471)
chr8 (99-137)||(44678320-44678358)
chr8 (419-460)||(15007260-15007301)
chr8 (99-139)||(3869292-3869332)
chr8 (99-139)||(11639378-11639418)
chr8 (101-141)||(14920752-14920792)
chr8 (99-139)||(30568619-30568659)
[»] chr7 (21 HSPs)
chr7 (99-141)||(18731022-18731064)
chr7 (96-141)||(43140698-43140743)
chr7 (99-141)||(31715962-31716004)
chr7 (99-141)||(35085742-35085784)
chr7 (96-137)||(8769282-8769323)
chr7 (99-138)||(10625428-10625467)
chr7 (99-138)||(11678706-11678745)
chr7 (102-141)||(21522226-21522265)
chr7 (96-139)||(37144106-37144149)
chr7 (96-139)||(39118010-39118053)
chr7 (99-138)||(47250890-47250929)
chr7 (99-141)||(8769623-8769665)
chr7 (99-141)||(23472897-23472939)
chr7 (99-137)||(32706735-32706773)
chr7 (99-141)||(32707072-32707114)
chr7 (99-141)||(35086081-35086123)
chr7 (99-137)||(44447917-44447955)
chr7 (99-141)||(44486273-44486315)
chr7 (531-564)||(23818710-23818743)
chr7 (99-139)||(10625109-10625149)
chr7 (99-139)||(23472596-23472636)
[»] chr4 (36 HSPs)
chr4 (417-471)||(17350048-17350102)
chr4 (96-141)||(32385152-32385197)
chr4 (415-465)||(12753572-12753620)
chr4 (96-139)||(46621270-46621313)
chr4 (99-141)||(18862782-18862824)
chr4 (99-141)||(21217850-21217892)
chr4 (100-138)||(44432968-44433006)
chr4 (99-141)||(44710406-44710448)
chr4 (99-141)||(54136094-54136136)
chr4 (100-141)||(33625868-33625909)
chr4 (100-141)||(33882290-33882331)
chr4 (97-141)||(1205379-1205423)
chr4 (99-138)||(9010508-9010547)
chr4 (98-141)||(29970195-29970238)
chr4 (99-138)||(46200487-46200526)
chr4 (99-141)||(1205718-1205760)
chr4 (99-137)||(10014468-10014506)
chr4 (99-137)||(10017818-10017856)
chr4 (99-137)||(10021609-10021647)
chr4 (99-141)||(21218188-21218230)
chr4 (99-141)||(29864516-29864558)
chr4 (99-141)||(32384656-32384698)
chr4 (99-141)||(33626205-33626247)
chr4 (99-141)||(34958835-34958877)
chr4 (99-141)||(38866401-38866443)
chr4 (99-141)||(46535526-46535568)
chr4 (99-141)||(52914955-52914997)
chr4 (96-129)||(1157203-1157236)
chr4 (96-141)||(2738880-2738925)
chr4 (96-141)||(22831139-22831184)
chr4 (96-141)||(25058833-25058878)
chr4 (96-141)||(25218084-25218129)
chr4 (96-141)||(34959172-34959217)
chr4 (96-141)||(45911579-45911624)
chr4 (100-137)||(46620931-46620968)
chr4 (99-139)||(54191927-54191967)
[»] chr6 (14 HSPs)
chr6 (96-141)||(24604875-24604920)
chr6 (96-141)||(31029524-31029569)
chr6 (96-137)||(33971928-33971969)
chr6 (99-141)||(3288933-3288975)
chr6 (99-141)||(3338480-3338522)
chr6 (99-141)||(9173904-9173946)
chr6 (99-141)||(14336905-14336947)
chr6 (99-141)||(24548244-24548286)
chr6 (99-141)||(35132604-35132646)
chr6 (96-141)||(25551677-25551722)
chr6 (96-129)||(33544822-33544855)
chr6 (99-139)||(11525108-11525148)
chr6 (99-139)||(17245667-17245707)
chr6 (99-139)||(19135789-19135829)
[»] chr2 (41 HSPs)
chr2 (96-141)||(43183924-43183969)
chr2 (96-139)||(4121106-4121149)
chr2 (100-139)||(34127570-34127609)
chr2 (99-141)||(4104162-4104204)
chr2 (99-141)||(12303788-12303830)
chr2 (99-141)||(16736104-16736146)
chr2 (99-141)||(18565344-18565386)
chr2 (99-141)||(31450669-31450711)
chr2 (96-138)||(32933591-32933633)
chr2 (99-141)||(37412596-37412638)
chr2 (430-471)||(19084708-19084749)
chr2 (96-141)||(27132511-27132556)
chr2 (96-141)||(37744729-37744774)
chr2 (96-141)||(44610862-44610907)
chr2 (96-139)||(16655949-16655992)
chr2 (99-138)||(41377698-41377737)
chr2 (99-141)||(4104500-4104542)
chr2 (99-141)||(4120767-4120809)
chr2 (99-141)||(5961672-5961714)
chr2 (103-141)||(12304126-12304164)
chr2 (99-141)||(16260874-16260916)
chr2 (99-141)||(16261211-16261253)
chr2 (99-137)||(17856534-17856572)
chr2 (99-141)||(20908514-20908556)
chr2 (99-141)||(20908852-20908894)
chr2 (99-141)||(28202863-28202905)
chr2 (99-141)||(28203201-28203243)
chr2 (99-141)||(32933932-32933974)
chr2 (96-138)||(34484235-34484277)
chr2 (99-141)||(39150166-39150208)
chr2 (99-141)||(39912630-39912672)
chr2 (96-129)||(5720142-5720175)
chr2 (429-470)||(7394643-7394684)
chr2 (96-141)||(28631615-28631660)
chr2 (100-141)||(34820283-34820324)
chr2 (96-141)||(34820620-34820665)
chr2 (96-141)||(44915740-44915785)
chr2 (101-141)||(10833376-10833416)
chr2 (99-135)||(27132857-27132893)
chr2 (99-139)||(27476710-27476750)
chr2 (99-139)||(31451009-31451049)
[»] chr1 (43 HSPs)
chr1 (96-141)||(30293353-30293398)
chr1 (96-139)||(42607522-42607565)
chr1 (99-141)||(9881555-9881597)
chr1 (99-141)||(16268030-16268072)
chr1 (99-141)||(23281351-23281393)
chr1 (99-141)||(25088019-25088061)
chr1 (96-138)||(30611220-30611262)
chr1 (99-141)||(33753228-33753270)
chr1 (97-139)||(49291326-49291368)
chr1 (99-141)||(51691877-51691919)
chr1 (96-141)||(6181616-6181661)
chr1 (96-141)||(24655586-24655631)
chr1 (96-141)||(30293013-30293058)
chr1 (96-141)||(50118347-50118392)
chr1 (97-141)||(10654370-10654414)
chr1 (96-139)||(13944511-13944554)
chr1 (99-138)||(14118533-14118572)
chr1 (99-138)||(19986466-19986505)
chr1 (99-138)||(34028724-34028763)
chr1 (99-138)||(34029065-34029104)
chr1 (99-138)||(34279585-34279624)
chr1 (99-138)||(36077274-36077313)
chr1 (99-138)||(45305753-45305792)
chr1 (96-139)||(50574860-50574903)
chr1 (99-138)||(50921063-50921102)
chr1 (99-141)||(11797149-11797191)
chr1 (99-141)||(16267718-16267760)
chr1 (99-141)||(18793694-18793736)
chr1 (99-137)||(28112724-28112762)
chr1 (99-141)||(28970422-28970464)
chr1 (99-141)||(31125939-31125981)
chr1 (99-141)||(35986235-35986277)
chr1 (96-138)||(37199265-37199307)
chr1 (99-141)||(50921432-50921474)
chr1 (100-141)||(2125543-2125584)
chr1 (99-136)||(10654033-10654070)
chr1 (96-141)||(19885982-19886027)
chr1 (96-141)||(29256832-29256877)
chr1 (100-141)||(40703206-40703247)
chr1 (99-135)||(11395007-11395043)
chr1 (99-139)||(14776078-14776118)
chr1 (99-139)||(42607845-42607885)
chr1 (99-139)||(51692213-51692253)
[»] scaffold0809 (2 HSPs)
scaffold0809 (99-141)||(4659-4701)
scaffold0809 (96-130)||(4338-4372)
[»] scaffold0168 (2 HSPs)
scaffold0168 (99-141)||(11491-11533)
scaffold0168 (99-141)||(11828-11870)
[»] scaffold0051 (2 HSPs)
scaffold0051 (99-141)||(40355-40397)
scaffold0051 (99-137)||(40697-40735)
[»] scaffold0188 (1 HSPs)
scaffold0188 (96-141)||(13882-13927)


Alignment Details
Target: chr3 (Bit Score: 112; Significance: 2e-56; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 366 - 481
Target Start/End: Complemental strand, 19647614 - 19647499
Alignment:
Q  366 atagatgaatgaattcttgatccacccttcctttaataatcaaccttcaaaatctcagattgatagagcttcgtgctaataacgtgttatgaaattaatc 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19647614 atagatgaatgaattcttgatccacccttcctttaataatcaaccttcaaaatctccgattgatagagcttcgtgctaataacgtgttatgaaattaatc 19647515  T
Q  466 aaaagttgcattgtat 481  Q
    ||||||||||||||||    
T  19647514 aaaagttgcattgtat 19647499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 522 - 564
Target Start/End: Complemental strand, 19647458 - 19647416
Alignment:
Q  522 tatatatcattacttcacaagtgtgtcctttacattacaactt 564  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19647458 tatatatcattacttcacaagtgtgtcctttacattacaactt 19647416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 7274656 - 7274698
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  7274656 taaattgcatttttggtcccttaaatatttaggtagtatcgct 7274698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 40410712 - 40410757
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  40410712 ggttaaattgcatttttggtcccttaactatttaggtagtatcgct 40410757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 34521641 - 34521598
Alignment:
Q  98 ttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||    
T  34521641 ttaaattgcatttttggtcccttaactatttaggtagtatcgct 34521598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 35580335 - 35580292
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||    
T  35580335 ggttaaattgcatttttggtcccttaactatttaggtagtatcg 35580292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 4846979 - 4846937
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  4846979 taaattgcatttttggtcccttaactatttaggtagtatcgct 4846937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 8846459 - 8846417
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  8846459 taaattgcatttttggtcccttaactatttaggtagtatcgct 8846417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 34521269 - 34521311
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  34521269 taaattgcatttttggtcccttaattatttaggtagtatcgct 34521311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 45871700 - 45871742
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  45871700 taaattgcatttttggtcccttaactatttaggtagtatcgct 45871742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 54107672 - 54107714
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  54107672 taaattgcatttttggtcccttaactatttaggtagtatcgct 54107714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 54108503 - 54108461
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  54108503 taaattgcatttttggtcccttaattatttagctagtatcgct 54108461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 12123465 - 12123420
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  12123465 ggttaaatttcatttttggtcccttaactatttaggtagtatcgct 12123420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 14353046 - 14353091
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||| |||||||| ||||||| ||||||||||    
T  14353046 ggttaaattgcatttttgatcccttaattatttaggtagtatcgct 14353091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 41208401 - 41208446
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||    
T  41208401 ggttaaattgcatttttggtcccttaactatttaagtagtatcgct 41208446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 35753408 - 35753448
Alignment:
Q  101 aattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||| ||||||| ||||||||||    
T  35753408 aattgcatttttggtcccttaactatttaggtagtatcgct 35753448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 44069126 - 44069166
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||||||||||||||||||||| ||||||| ||||||||    
T  44069126 taaattgcatttttggtcccttaactatttaggtagtatcg 44069166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 12123093 - 12123132
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  12123093 taaattgcatttttggtcccttaactatttaggtagtatc 12123132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 8846079 - 8846117
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtat 137  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  8846079 taaattgcatttttggtcccttaactatttaggtagtat 8846117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 21918497 - 21918539
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    ||||||||||||||||||||||||||| ||||||  |||||||    
T  21918497 ggttaaattgcatttttggtcccttaactatttaattagtatc 21918539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 26332322 - 26332364
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||    
T  26332322 taaattgcatttttggtcccctaactatttaggtagtatcgct 26332364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 31513866 - 31513908
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||    
T  31513866 taaattgcatttttggtccattaactatttaggtagtatcgct 31513908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 31514245 - 31514203
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||    
T  31514245 taaattgcatttttagtcccttaactatttaggtagtatcgct 31514203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 33812926 - 33812884
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||| ||||||||||| ||||||||||||| ||||||||||    
T  33812926 taaatttcatttttggtctcttaaatatttaggtagtatcgct 33812884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 41208783 - 41208741
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||    
T  41208783 taaattgcatttttagtcccttaactatttaggtagtatcgct 41208741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 44069506 - 44069464
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  44069506 taaattgtatttttggtcccttaactatttaggtagtatcgct 44069464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 45171450 - 45171408
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||    
T  45171450 taaattgcatttttagtcccttaactatttaggtagtatcgct 45171408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 5348579 - 5348624
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||| ||||||||| ||||||  ||||||||||    
T  5348579 ggttaaattgcatttttagtcccttaactatttaattagtatcgct 5348624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 14353430 - 14353389
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgc 140  Q
    ||||||| |||||||||||||||| ||||||| |||||||||    
T  14353430 taaattgtatttttggtcccttaactatttaggtagtatcgc 14353389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 33812724 - 33812765
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtat 137  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||    
T  33812724 ggttaaatttcatttttggtcccttaactatttaggtagtat 33812765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 53678433 - 53678478
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||| | ||||||||||||||| |||||| |||||||||||    
T  53678433 ggttaaattacgtttttggtcccttaattatttaaatagtatcgct 53678478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 54081284 - 54081329
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||| |||||||||||||||| |||||||  |||||||||    
T  54081284 ggttaaattgtatttttggtcccttaactatttaggcagtatcgct 54081329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 2829408 - 2829448
Alignment:
Q  97 gttaaattgcatttttggtcccttaaatatttagatagtat 137  Q
    ||||||||| |||||||||||||||| ||||||| ||||||    
T  2829408 gttaaattgtatttttggtcccttaactatttaggtagtat 2829448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 13867047 - 13867007
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||||||||||||||||||||| ||||||  ||||||||    
T  13867047 taaattgcatttttggtcccttaactatttaattagtatcg 13867007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 17274161 - 17274117
Alignment:
Q  97 gttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||| ||||||||||| |||| ||||||| ||||||||||    
T  17274161 gttaaattgtatttttggtcctttaactatttaggtagtatcgct 17274117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 41997822 - 41997862
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||| ||||||||||||||||| ||||||| ||||||||    
T  41997822 taaattacatttttggtcccttaactatttaggtagtatcg 41997862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 43527026 - 43527066
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||||||||||| |||||||| ||||||| ||||||||    
T  43527026 taaattgcatttttgatcccttaactatttaggtagtatcg 43527066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 44316630 - 44316670
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||||||||||||||||||||| ||||||  ||||||||    
T  44316630 taaattgcatttttggtcccttaactatttaattagtatcg 44316670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 49529203 - 49529163
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||||||||||||||||||||| ||||||  ||||||||    
T  49529203 taaattgcatttttggtcccttaactatttaattagtatcg 49529163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 51170764 - 51170724
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||||||||||| |||||||| ||||||| ||||||||    
T  51170764 taaattgcatttttgatcccttaactatttaggtagtatcg 51170724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 52268486 - 52268446
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||||||||||||||| |||| ||||||| ||||||||    
T  52268486 taaattgcatttttggtccattaactatttagttagtatcg 52268446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 53841407 - 53841371
Alignment:
Q  101 aattgcatttttggtcccttaaatatttagatagtat 137  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  53841407 aattgcatttttggtcccttaactatttagctagtat 53841371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 415 - 465
Target Start/End: Original strand, 29742025 - 29742075
Alignment:
Q  415 aaatctcagattgatagagcttcgtgctaataacgtgttatgaaattaatc 465  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29742025 aaatctcagattgatagagcttcgtgctgataacgtgttatgaaattaatc 29742075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 5460332 - 5460287
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||    
T  5460332 ggttaaattgtatttttggtcccttaactatttagatagtatcgct 5460287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 465
Target Start/End: Original strand, 28663522 - 28663569
Alignment:
Q  418 tctcagattgatagagcttcgtgctaataacgtgttatgaaattaatc 465  Q
    |||||||| | |||||||||||||| ||||||||||||||||||||||    
T  28663522 tctcagatcgttagagcttcgtgctgataacgtgttatgaaattaatc 28663569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 7399080 - 7399122
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  7399080 taaattgcatttttggtcccttaactatttaggtagtatcgct 7399122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 8418567 - 8418525
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  8418567 taaattgcatttttggtcccttaactatttaggtagtatcgct 8418525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 29023940 - 29023982
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  29023940 taaattgcatttttggtcccttaactatttaggtagtatcgct 29023982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 35263497 - 35263539
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  35263497 taaattgcatttttggtcccttaactatttaggtagtatcgct 35263539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 19205329 - 19205284
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||| |||||||| ||||||| ||||||||||    
T  19205329 ggttaaattgcatttttgatcccttaactatttaggtagtatcgct 19205284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 464
Target Start/End: Complemental strand, 21154291 - 21154243
Alignment:
Q  416 aatctcagattgatagagcttcgtgctaataacgtgttatgaaattaat 464  Q
    ||||||| |||| |||||||||||| | |||||||||||||||||||||    
T  21154291 aatctcatattgttagagcttcgtgttgataacgtgttatgaaattaat 21154243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 464
Target Start/End: Complemental strand, 21161426 - 21161378
Alignment:
Q  416 aatctcagattgatagagcttcgtgctaataacgtgttatgaaattaat 464  Q
    ||||||| |||| |||||||||||| | |||||||||||||||||||||    
T  21161426 aatctcatattgttagagcttcgtgttgataacgtgttatgaaattaat 21161378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 15670537 - 15670494
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||    
T  15670537 ggttaaattgtatttttggtcccttaactatttaggtagtatcg 15670494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 19204947 - 19204986
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  19204947 taaattgcatttttggtcccttaactatttaggtagtatc 19204986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 31909316 - 31909273
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||||||||||||||||||||||| | ||||| ||||||||    
T  31909316 ggttaaattgcatttttggtcccttaactgtttaggtagtatcg 31909273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 3878484 - 3878526
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  3878484 taaattgtatttttggtcccttaattatttaggtagtatcgct 3878526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 5460191 - 5460233
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||||||||||||| |||||||| |||||||||    
T  5460191 taaattgtatttttggtcccttaactatttagacagtatcgct 5460233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 139
Target Start/End: Original strand, 7210461 - 7210499
Alignment:
Q  101 aattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||||||||||||||||||||||||||| || |||||    
T  7210461 aattgcatttttggtcccttaaatatttaggtactatcg 7210499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 10656097 - 10656139
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  10656097 taaattgtatttttggtcccttaactatttaggtagtatcgct 10656139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 10656477 - 10656435
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||    
T  10656477 taaattgcatttttgatcccttaactatttaggtagtatcgct 10656435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 12593459 - 12593501
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||    
T  12593459 taaattgcatttttgatcccttaactatttaggtagtatcgct 12593501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 19615422 - 19615464
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    ||||||||||||||||||||||||| | ||||||| |||||||    
T  19615422 ggttaaattgcatttttggtcccttgactatttaggtagtatc 19615464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 429 - 471
Target Start/End: Complemental strand, 25590223 - 25590181
Alignment:
Q  429 tagagcttcgtgctaataacgtgttatgaaattaatcaaaagt 471  Q
    ||||||| |||||| |||||||||||||||||||||| |||||    
T  25590223 tagagctccgtgctgataacgtgttatgaaattaatctaaagt 25590181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 32272223 - 32272181
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  32272223 taaattgcatttttggtctcttaactatttagataatatcgct 32272181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 33763290 - 33763249
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  33763290 taaattgcatttttggtcccttaactatttag-tagtatcgct 33763249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 35263877 - 35263839
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtat 137  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  35263877 taaattgcatttttggtcccttaattatttaggtagtat 35263839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 36752284 - 36752242
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||  ||||||||||    
T  36752284 taaattgcatttttggtcccttaactatttatgtagtatcgct 36752242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 42710733 - 42710691
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  42710733 taaattgtatttttggtcccttaactatttaggtagtatcgct 42710691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 141
Target Start/End: Original strand, 5087811 - 5087852
Alignment:
Q  100 aaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||| |||||||||||||||| ||||||| ||||||||||    
T  5087811 aaattgaatttttggtcccttaactatttaggtagtatcgct 5087852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 15476266 - 15476311
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||  |||||||||||||||| ||||||| ||||||||||    
T  15476266 ggttaaattatatttttggtcccttaactatttaggtagtatcgct 15476311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 39706433 - 39706396
Alignment:
Q  100 aaattgcatttttggtcccttaaatatttagatagtat 137  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  39706433 aaattgcatttttggtcccttaactatttaggtagtat 39706396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 9693301 - 9693261
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||||||||||||||||||||  |||||| ||||||||    
T  9693301 taaattgcatttttggtcccttaacgatttaggtagtatcg 9693261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 21750813 - 21750853
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||||| ||||||||||||||| ||||||| ||||||||    
T  21750813 taaattgcctttttggtcccttaactatttaggtagtatcg 21750853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 33699278 - 33699318
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||||||||| ||||||||||| ||||||| ||||||||    
T  33699278 taaattgcatttatggtcccttaactatttaggtagtatcg 33699318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 40589057 - 40589093
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagt 135  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  40589057 taaattgcatttttggtcccttaactatttaggtagt 40589093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 40589437 - 40589397
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||||||||||||| |||||| ||||||| ||||||||    
T  40589437 taaattgcatttttggttccttaactatttaggtagtatcg 40589397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 40589660 - 40589696
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagt 135  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  40589660 taaattgcatttttggtcccttaactatttaggtagt 40589696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 40590040 - 40590000
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||||||||||||| |||||| ||||||| ||||||||    
T  40590040 taaattgcatttttggttccttaactatttaggtagtatcg 40590000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 28350467 - 28350515
Alignment:
Q  423 gattgatagagcttcgtgctaataacgtgttatgaaattaatcaaaagt 471  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  28350467 gattgatagagcttcgtgctgataacgtgttatgaaattaatccaaagt 28350515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 415 - 470
Target Start/End: Complemental strand, 22275009 - 22274954
Alignment:
Q  415 aaatctcagattgatagagcttcgtgctaataacgtgttatgaaattaatcaaaag 470  Q
    |||||||| ||||||||||||||||| | |||||||||||||||||||||| ||||    
T  22275009 aaatctcatattgatagagcttcgtgttgataacgtgttatgaaattaatccaaag 22274954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 23244901 - 23244856
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  23244901 ggttagattgcatttttggtcccttaactatttagatagtatcgct 23244856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 39240405 - 39240362
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||    
T  39240405 ggttaaattgcatttttggtcccttaattatttaggtagtatcg 39240362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 6843495 - 6843537
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    ||||||||||||||||||||||||||| ||||||| |||||||    
T  6843495 ggttaaattgcatttttggtcccttaactatttaggtagtatc 6843537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 7042007 - 7041965
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| |||||| |||||||||||    
T  7042007 taaattgcatttttggtcccttaactatttatatagtatcgct 7041965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 11198588 - 11198546
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| |||||||| |||||||||    
T  11198588 taaattgcatttttggtcccttaactatttagacagtatcgct 11198546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 24456737 - 24456779
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  24456737 taaattgcatttttggtcccttaactatttaggtagtatcgct 24456779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 37393860 - 37393818
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  37393860 taaattgcatttttggtcccttaactatttaggtagtatcgct 37393818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 40040165 - 40040207
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  40040165 taaattgcatttttggtcccttaactatttaggtagtatcgct 40040207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 758344 - 758389
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||| ||||||| ||||||| ||||||||||    
T  758344 ggttaaattgcatttttggccccttaactatttaggtagtatcgct 758389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 24457035 - 24456994
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgc 140  Q
    |||||||||||||||||||||||| ||||||| |||||||||    
T  24457035 taaattgcatttttggtcccttaactatttaggtagtatcgc 24456994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 26736125 - 26736170
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  26736125 ggttaaattgcatttttggtctcttaactatttaggtagtatcgct 26736170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 35224150 - 35224110
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||||||||||||||||||||| ||||||| ||||||||    
T  35224150 taaattgcatttttggtcccttaactatttagttagtatcg 35224110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 37393477 - 37393520
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||    
T  37393477 ggttaaattgtatttttggtcccttaactatttaggtagtatcg 37393520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 39240033 - 39240072
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  39240033 taaattgcatttttggtcccttaactatttaggtagtatc 39240072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 119120 - 119158
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtat 137  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  119120 taaattgcatttttggtcccttaactatttaggtagtat 119158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 1826174 - 1826132
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  1826174 taaattgtatttttggtcccttaactatttaggtagtatcgct 1826132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 1860619 - 1860577
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  1860619 taaattgtatttttggtcccttaactatttaggtagtatcgct 1860577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 5417196 - 5417154
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||    
T  5417196 taaactgcatttttggtcccttaactatttaggtagtatcgct 5417154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 130
Target Start/End: Complemental strand, 8654322 - 8654288
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttag 130  Q
    ||||||||||||||||||||||||||| |||||||    
T  8654322 ggttaaattgcatttttggtcccttaactatttag 8654288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 16645931 - 16645893
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtat 137  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  16645931 taaattgcatttttggtcccttaactatttaggtagtat 16645893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 18622130 - 18622088
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||| |||||||| ||||| ||||||||||||||||||    
T  18622130 taaattgcacttttggtctcttaactatttagatagtatcgct 18622088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 30872786 - 30872824
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtat 137  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  30872786 taaattgcatttttggtcccttaactatttaggtagtat 30872824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 35223777 - 35223819
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||| | ||||||| ||||||||||    
T  35223777 taaattgcatttttggtccctttactatttaggtagtatcgct 35223819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 39912305 - 39912263
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    ||||||||| ||||||||||||||||| ||||||| |||||||    
T  39912305 ggttaaattacatttttggtcccttaactatttaggtagtatc 39912263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 40032429 - 40032471
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||    
T  40032429 taaattgcatttttggtcacttaattatttaggtagtatcgct 40032471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 44678320 - 44678358
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtat 137  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  44678320 taaattgcatttttggtcccttaactatttaggtagtat 44678358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 460
Target Start/End: Complemental strand, 15007301 - 15007260
Alignment:
Q  419 ctcagattgatagagcttcgtgctaataacgtgttatgaaat 460  Q
    |||| ||||||||||||||||||| | |||||||||||||||    
T  15007301 ctcaaattgatagagcttcgtgctgagaacgtgttatgaaat 15007260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 3869332 - 3869292
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||| |||||||||||||||| ||||||| ||||||||    
T  3869332 taaattgtatttttggtcccttaactatttaggtagtatcg 3869292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 11639418 - 11639378
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||||||||||| ||||||||| ||||||| ||||||||    
T  11639418 taaattgcatttttcgtcccttaactatttaggtagtatcg 11639378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 14920792 - 14920752
Alignment:
Q  101 aattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||| ||||||  ||||||||||    
T  14920792 aattgcatttttggtcccttaactatttaagtagtatcgct 14920752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 30568659 - 30568619
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||| |||||||||||||||| ||||||| ||||||||    
T  30568659 taaattgtatttttggtcccttaactatttagttagtatcg 30568619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 18731022 - 18731064
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  18731022 taaattgcatttttggtcccttaactatttagatagtatcgct 18731064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 43140698 - 43140743
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  43140698 ggttaaattgcatttttagtcccttaactatttagatagtatcgct 43140743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 31716004 - 31715962
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  31716004 taaattgcatttttggtcccttaactatttaggtagtatcgct 31715962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 35085742 - 35085784
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  35085742 taaattgcatttttggtcccttaactatttaggtagtatcgct 35085784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 8769282 - 8769323
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtat 137  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  8769282 ggttaaattgcatttttggtcccttaactatttaggtagtat 8769323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 10625467 - 10625428
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  10625467 taaattgcatttttggtcccttaactatttaggtagtatc 10625428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 11678706 - 11678745
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    ||||||||||||||||||| ||||||||||||||| ||||    
T  11678706 taaattgcatttttggtcctttaaatatttagataatatc 11678745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 141
Target Start/End: Original strand, 21522226 - 21522265
Alignment:
Q  102 attgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||||| ||||||| ||||||||||    
T  21522226 attgcatttttggtcccttaattatttaggtagtatcgct 21522265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 37144149 - 37144106
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||    
T  37144149 ggttaaattgcatttttggtcccttaactatttaattagtatcg 37144106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 39118010 - 39118053
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||    
T  39118010 ggttaaattgtatttttggtcccttaactatttaggtagtatcg 39118053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 47250929 - 47250890
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  47250929 taaattgcatttttggtcccttaactatttaggtagtatc 47250890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 8769665 - 8769623
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||    
T  8769665 taaattgcatttttagtcccttaactatttaggtagtatcgct 8769623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 23472939 - 23472897
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| |||| |||||    
T  23472939 taaattgcatttttggtcccttaactatttaggtagtttcgct 23472897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 32706735 - 32706773
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtat 137  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  32706735 taaattgcatttttggtcccttaactatttaggtagtat 32706773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 32707114 - 32707072
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||    
T  32707114 taaattgtatttttagtcccttaattatttagatagtatcgct 32707072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 35086123 - 35086081
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||    
T  35086123 taaattgcatttttggtcctttaactatttaggtagtatcgct 35086081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 44447917 - 44447955
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtat 137  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  44447917 taaattgcatttttggtccgttaactatttagatagtat 44447955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 44486315 - 44486273
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||    
T  44486315 taaattgcatttttggtcctttaactatttaggtagtatcgct 44486273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 564
Target Start/End: Original strand, 23818710 - 23818743
Alignment:
Q  531 ttacttcacaagtgtgtcctttacattacaactt 564  Q
    ||||||||||||||||| ||||||||||||||||    
T  23818710 ttacttcacaagtgtgtactttacattacaactt 23818743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 10625109 - 10625149
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||| ||||||||||||||||| ||||||| ||||||||    
T  10625109 taaattacatttttggtcccttaactatttaggtagtatcg 10625149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 23472596 - 23472636
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||| |||||||||||||||| ||||||| ||||||||    
T  23472596 taaattgtatttttggtcccttaactatttaggtagtatcg 23472636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 417 - 471
Target Start/End: Complemental strand, 17350102 - 17350048
Alignment:
Q  417 atctcagattgatagagcttcgtgctaataacgtgttatgaaattaatcaaaagt 471  Q
    ||||||||| | |||||||||||||| |||||||||||||||||| |||||||||    
T  17350102 atctcagatcgttagagcttcgtgctgataacgtgttatgaaattgatcaaaagt 17350048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 32385197 - 32385152
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  32385197 ggttaaattgcatttttggtcccttaactatttaggtagtatcgct 32385152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 415 - 465
Target Start/End: Original strand, 12753572 - 12753620
Alignment:
Q  415 aaatctcagattgatagagcttcgtgctaataacgtgttatgaaattaatc 465  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  12753572 aaatctcagattgatag--cttcgtgctgataacgtgttatgaaattaatc 12753620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 46621313 - 46621270
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||    
T  46621313 ggttaaattgcatttttggtcccttaactatttaggtagtatcg 46621270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 18862824 - 18862782
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  18862824 taaattgcatttttggtcccttaactatttaggtagtatcgct 18862782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 21217850 - 21217892
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  21217850 taaattgcatttttggtcccttaactatttaggtagtatcgct 21217892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 138
Target Start/End: Complemental strand, 44433006 - 44432968
Alignment:
Q  100 aaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  44433006 aaattgcatttttggtcccttaactatttagatagtatc 44432968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 44710406 - 44710448
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  44710406 taaattgcatttttggtcccttaactatttaggtagtatcgct 44710448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 54136094 - 54136136
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  54136094 taaattgcatttttggtcccttaactatttaggtagtatcgct 54136136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 100 - 141
Target Start/End: Original strand, 33625868 - 33625909
Alignment:
Q  100 aaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||||||| ||||||| ||||||||||    
T  33625868 aaattgcatttttggtcccttaactatttaggtagtatcgct 33625909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 33882331 - 33882290
Alignment:
Q  100 aaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||||||| ||||||| ||||||||||    
T  33882331 aaattgcatttttggtcccttaactatttaggtagtatcgct 33882290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 1205379 - 1205423
Alignment:
Q  97 gttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||| |||||||||||||| ||||||| ||||||||||    
T  1205379 gttaaattgcacttttggtcccttaactatttaggtagtatcgct 1205423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 9010508 - 9010547
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  9010508 taaattgcatttttggtcccttaattatttaggtagtatc 9010547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 29970195 - 29970238
Alignment:
Q  98 ttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||    
T  29970195 ttaaattgcatttttggtcccataactatttaggtagtatcgct 29970238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 46200487 - 46200526
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  46200487 taaattgcatttttggtcccttaactatttaggtagtatc 46200526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 1205760 - 1205718
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| |||||||  |||||||||    
T  1205760 taaattgcatttttggtcccttaactatttaggcagtatcgct 1205718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 10014468 - 10014506
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtat 137  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  10014468 taaattgcatttttggtcccttaactatttaggtagtat 10014506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 10017818 - 10017856
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtat 137  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  10017818 taaattgcatttttggtcccttaactatttaggtagtat 10017856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 10021609 - 10021647
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtat 137  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  10021609 taaattgcatttttggtcccttaactatttaggtagtat 10021647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 21218230 - 21218188
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||    
T  21218230 taaattgcatttttgatcccttaactatttaggtagtatcgct 21218188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 29864558 - 29864516
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  29864558 taaattgtatttttggtcccttaactatttaggtagtatcgct 29864516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 32384656 - 32384698
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  32384656 taaattgtatttttggtcccttaactatttaggtagtatcgct 32384698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 33626247 - 33626205
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||    
T  33626247 taaatttcatttttggtcccttaactatttaggtagtatcgct 33626205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 34958835 - 34958877
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  34958835 taaattgtatttttggtcccttaactatttaggtagtatcgct 34958877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 38866401 - 38866443
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  38866401 taaattgtatttttggtcccttaactatttaggtagtatcgct 38866443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 46535526 - 46535568
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  46535526 taaattgtatttttggtcccttaactatttaggtagtatcgct 46535568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 52914955 - 52914997
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  52914955 taaattgtatttttggtcccttaactatttaggtagtatcgct 52914997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 1157203 - 1157236
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatattta 129  Q
    ||||||||||||||||||||||||||| ||||||    
T  1157203 ggttaaattgcatttttggtcccttaactattta 1157236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 2738880 - 2738925
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||| |||||||| ||||||  ||||||||||    
T  2738880 ggttaaattgcatttttgatcccttaactatttaagtagtatcgct 2738925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 22831184 - 22831139
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||| |||||||||||||||| ||||| | ||||||||||    
T  22831184 ggttaaattggatttttggtcccttaactattttgctagtatcgct 22831139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 25058833 - 25058878
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||| ||| ||||| ||||||| ||||||||||    
T  25058833 ggttaaattgcattttttgtctcttaactatttaggtagtatcgct 25058878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 25218084 - 25218129
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||| ||||||||||||||||| ||||||| || |||||||    
T  25218084 ggttaaatttcatttttggtcccttaactatttaggtaatatcgct 25218129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 34959217 - 34959172
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||| |||||||||||||| ||||||| || |||||||    
T  34959217 ggttaaattgcaattttggtcccttaactatttaggtattatcgct 34959172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 45911579 - 45911624
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||| | |||| ||||||| ||||||||||    
T  45911579 ggttaaattgcatttttggttcattaactatttaggtagtatcgct 45911624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 46620931 - 46620968
Alignment:
Q  100 aaattgcatttttggtcccttaaatatttagatagtat 137  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  46620931 aaattgcatttttggtcccttaactatttaggtagtat 46620968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 54191967 - 54191927
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  54191967 taaattgtatttttggtcccttaactatttagatagcatcg 54191927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 24604875 - 24604920
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  24604875 ggttaaattgcatttttggtcccttaactatttaggtagtatcgct 24604920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 31029524 - 31029569
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||| |||||||| ||||||| ||||||||||    
T  31029524 ggttaaattgcatttttgatcccttaattatttaggtagtatcgct 31029569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 33971928 - 33971969
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtat 137  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  33971928 ggttaaattgcatttttggtcccttaactatttaggtagtat 33971969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 3288933 - 3288975
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||    
T  3288933 taaattgcatttatggtcccttaactatttaggtagtatcgct 3288975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 3338480 - 3338522
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||    
T  3338480 taaattgcattttttgtcccttaactatttaggtagtatcgct 3338522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 9173904 - 9173946
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  9173904 taaattgtatttttggtcccttaactatttaggtagtatcgct 9173946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 14336905 - 14336947
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||    
T  14336905 taaattgcatttttgatcccttaattatttagctagtatcgct 14336947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 24548244 - 24548286
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||  ||||||||||    
T  24548244 taaattgcatttttggtcccttaactatttaattagtatcgct 24548286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 35132604 - 35132646
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||    
T  35132604 taaattgcatttttggtccattaactatttaggtagtatcgct 35132646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 25551722 - 25551677
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||| |||||||||||||||| ||||||  ||||||||||    
T  25551722 ggttaaattgtatttttggtcccttaactatttaagtagtatcgct 25551677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 33544822 - 33544855
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatattta 129  Q
    ||||||||||||||||||||||||||| ||||||    
T  33544822 ggttaaattgcatttttggtcccttaactattta 33544855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 11525148 - 11525108
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||||||||||||||||||||  |||||| ||||||||    
T  11525148 taaattgcatttttggtcccttaacaatttaggtagtatcg 11525108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 17245707 - 17245667
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||||||||||||||||||||| ||||||  ||||||||    
T  17245707 taaattgcatttttggtcccttaattatttaattagtatcg 17245667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 19135829 - 19135789
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||||||||||||||| |||| ||||||| ||||||||    
T  19135829 taaattgcatttttggtccattaagtatttaggtagtatcg 19135789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000003; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 43183969 - 43183924
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  43183969 ggttaaattgcatttttggtcccttaattatttaggtagtatcgct 43183924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 4121149 - 4121106
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||    
T  4121149 ggttaaattgcatttttggtcccttaactatttaggtagtatcg 4121106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 100 - 139
Target Start/End: Original strand, 34127570 - 34127609
Alignment:
Q  100 aaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  34127570 aaattgcatttttggtcccttaactatttagatagtatcg 34127609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 4104162 - 4104204
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  4104162 taaattgcatttttggtcccttaactatttaggtagtatcgct 4104204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 12303788 - 12303830
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  12303788 taaattgcatttttggtcccttaactatttaggtagtatcgct 12303830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 16736104 - 16736146
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  16736104 taaattgcatttttggtcccttaactatttaggtagtatcgct 16736146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 18565386 - 18565344
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  18565386 taaattgcatttttggtcccttaactatttaggtagtatcgct 18565344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 31450669 - 31450711
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  31450669 taaattgcatttttggtcccttaactatttaggtagtatcgct 31450711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 32933591 - 32933633
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    ||||||||||||||||||||||||||| ||||||| |||||||    
T  32933591 ggttaaattgcatttttggtcccttaactatttaggtagtatc 32933633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 37412596 - 37412638
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  37412596 taaattgcatttttggtcccttaactatttagttagtatcgct 37412638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 430 - 471
Target Start/End: Complemental strand, 19084749 - 19084708
Alignment:
Q  430 agagcttcgtgctaataacgtgttatgaaattaatcaaaagt 471  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  19084749 agagcttcgtgctgataacgtgttatgaaattgatcaaaagt 19084708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 27132511 - 27132556
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||||    
T  27132511 ggttaaattgtatttttggtcccttaactatttaggtagtatcgct 27132556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 37744774 - 37744729
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||| | |||||| ||||||||||||||||||    
T  37744774 ggttaaattgcatttttgattccttaactatttagatagtatcgct 37744729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 44610862 - 44610907
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||||||||||| ||||||| || |||||||    
T  44610862 ggttaaattgcatttttggtcccttaactatttaggtaatatcgct 44610907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 16655992 - 16655949
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||    
T  16655992 ggttaaattgtatttttggtcccttaactatttaggtagtatcg 16655949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 41377737 - 41377698
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  41377737 taaattgcatttttggtcccttaactatttaggtagtatc 41377698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 4104542 - 4104500
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  4104542 taaattgtatttttggtcccttaactatttaggtagtatcgct 4104500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 4120767 - 4120809
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||    
T  4120767 taaattgcattttttgtcccttaactatttaggtagtatcgct 4120809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 5961672 - 5961714
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||    
T  5961672 taaattgcatttttggccccttaactatttaggtagtatcgct 5961714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 141
Target Start/End: Complemental strand, 12304164 - 12304126
Alignment:
Q  103 ttgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  12304164 ttgcatttttggtcccttaactatttaggtagtatcgct 12304126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 16260874 - 16260916
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||    
T  16260874 taaatagcatttttggtcccttaactatttaggtagtatcgct 16260916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 16261253 - 16261211
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  16261253 taaattgtatttttggtcccttaactatttaggtagtatcgct 16261211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 17856572 - 17856534
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtat 137  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  17856572 taaattgcatttttggtcccttaactatttaggtagtat 17856534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 20908514 - 20908556
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  20908514 taaattgtatttttggtcccttaattatttaggtagtatcgct 20908556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 20908894 - 20908852
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  20908894 taaattgtatttttggtcccttaactatttaggtagtatcgct 20908852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 28202863 - 28202905
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| || |||||||    
T  28202863 taaattgcatttttggtcccttaactatttaggtaatatcgct 28202905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 28203243 - 28203201
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| | ||||||||    
T  28203243 taaattgcatttttggtcccttaactatttaggtcgtatcgct 28203201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 32933974 - 32933932
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| || |||||||    
T  32933974 taaattgcatttttggtcccttaactatttaggtaatatcgct 32933932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 34484235 - 34484277
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    |||||||||||||||||||||| |||| ||||||| |||||||    
T  34484235 ggttaaattgcatttttggtcctttaactatttaggtagtatc 34484277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 39150208 - 39150166
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||    
T  39150208 taaattgcatttttggtcctttaactatttaggtagtatcgct 39150166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 39912630 - 39912672
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  39912630 taaattgtatttttggtcccttaactatttaggtagtatcgct 39912672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 5720142 - 5720175
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatattta 129  Q
    ||||||||||||||||||||||||||| ||||||    
T  5720142 ggttaaattgcatttttggtcccttaactattta 5720175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 470
Target Start/End: Original strand, 7394643 - 7394684
Alignment:
Q  429 tagagcttcgtgctaataacgtgttatgaaattaatcaaaag 470  Q
    ||||| |||||||| |||||||||||||||||||||| ||||    
T  7394643 tagagtttcgtgctgataacgtgttatgaaattaatccaaag 7394684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 28631660 - 28631615
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||| |||||||||||||||| ||||| | ||||||||||    
T  28631660 ggttaaattgtatttttggtcccttaactatttgggtagtatcgct 28631615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 141
Target Start/End: Original strand, 34820283 - 34820324
Alignment:
Q  100 aaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||||||| ||||||  ||||||||||    
T  34820283 aaattgcatttttggtcccttaactatttaagtagtatcgct 34820324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 34820665 - 34820620
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||| |||||||||||||||| ||||||| |||| |||||    
T  34820665 ggttaaattgtatttttggtcccttaactatttaggtagtctcgct 34820620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 44915740 - 44915785
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||| ||||||||| ||||||  ||||||||||    
T  44915740 ggttaaattgcatttttagtcccttaactatttaattagtatcgct 44915785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 10833416 - 10833376
Alignment:
Q  101 aattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||  ||||||| ||||||||||    
T  10833416 aattgcatttttggtcccttagctatttaggtagtatcgct 10833376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 27132893 - 27132857
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagt 135  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  27132893 taaattgcatttttggtcccttaactatttaggtagt 27132857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 27476750 - 27476710
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||||||||||||||| ||||| ||||||| ||||||||    
T  27476750 taaattgcatttttggtctcttaactatttaggtagtatcg 27476710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 31451049 - 31451009
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||||||||||| |||||||| ||||||| ||||||||    
T  31451049 taaattgcatttttgatcccttaactatttaggtagtatcg 31451009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 30293398 - 30293353
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  30293398 ggttaaattgcatttttggtcccttaactatttaggtagtatcgct 30293353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 42607522 - 42607565
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||||||||||||||||||||||| |||||||||| |||||    
T  42607522 ggttaaattgcatttttggtcccttaactatttagataatatcg 42607565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 9881555 - 9881597
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  9881555 taaattgcatttttggtcccttaactatttaggtagtatcgct 9881597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 16268072 - 16268030
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  16268072 taaattgcatttttggtcccttaactatttaggtagtatcgct 16268030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 23281393 - 23281351
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  23281393 taaattgcatttttggtcccttaactatttaggtagtatcgct 23281351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 25088019 - 25088061
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  25088019 taaattgcatttttggtcccttaactatttaggtagtatcgct 25088061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 30611220 - 30611262
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    ||||||||||||||||||||||||||| |||||||||| ||||    
T  30611220 ggttaaattgcatttttggtcccttaactatttagatattatc 30611262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 33753228 - 33753270
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  33753228 taaattgcatttttggtcccttaactatttaggtagtatcgct 33753270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 49291368 - 49291326
Alignment:
Q  97 gttaaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||||||||||||| ||||||||| ||||||||||||||||    
T  49291368 gttaaattgcatttttcgtcccttaactatttagatagtatcg 49291326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 51691877 - 51691919
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  51691877 taaattgcatttttggtcccttaactatttaggtagtatcgct 51691919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 6181616 - 6181661
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||| |||||||| ||||||| ||||||||||    
T  6181616 ggttaaattgcatttttgatcccttaattatttagttagtatcgct 6181661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 24655586 - 24655631
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||    
T  24655586 ggttaaattgcatatttggtcccttaagtatttaggtagtatcgct 24655631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 30293013 - 30293058
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||| |||| ||||||| ||||||||||    
T  30293013 ggttaaattgcatttttggtccattaactatttaggtagtatcgct 30293058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 50118347 - 50118392
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||||    
T  50118347 ggttaaattgtatttttggtcccttaactatttaggtagtatcgct 50118392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 10654414 - 10654370
Alignment:
Q  97 gttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||| |||||||||||||||||||| ||||||| ||||||||||    
T  10654414 gttaatttgcatttttggtcccttaactatttaggtagtatcgct 10654370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 13944511 - 13944554
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||||||||||||||||||| |||| ||||||| ||||||||    
T  13944511 ggttaaattgcatttttggtcctttaactatttagctagtatcg 13944554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 14118533 - 14118572
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  14118533 taaattgcatttttggtcccttaactatttaggtagtatc 14118572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 19986505 - 19986466
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  19986505 taaattgcatttttggtcccttaactatttaggtagtatc 19986466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 34028724 - 34028763
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  34028724 taaattgcatttttggtcccttaactatttaggtagtatc 34028763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 34029104 - 34029065
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  34029104 taaattgcatttttggtcccttaactatttaggtagtatc 34029065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 34279624 - 34279585
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  34279624 taaattgcatttttggtcccttaactatttaggtagtatc 34279585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 36077274 - 36077313
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  36077274 taaattgcatttttggtcccttaattatttaggtagtatc 36077313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 45305792 - 45305753
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  45305792 taaattgcatttttggtcccttaactatttaggtagtatc 45305753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 50574903 - 50574860
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||| ||||||||||||||||||||| ||||||| ||||||||    
T  50574903 ggttagattgcatttttggtcccttaactatttaggtagtatcg 50574860  T

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Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 50921063 - 50921102
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  50921063 taaattgcatttttggtcccttaactatttaggtagtatc 50921102  T

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Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 11797149 - 11797191
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||    
T  11797149 taaattgcatttttggtcctttaattatttaggtagtatcgct 11797191  T

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Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 16267718 - 16267760
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| || |||||||    
T  16267718 taaattgcatttttggtcccttaactatttaggtaatatcgct 16267760  T

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Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 18793694 - 18793736
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||    
T  18793694 taaatttcatttttggtcccttaattatttaggtagtatcgct 18793736  T

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Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 28112724 - 28112762
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtat 137  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  28112724 taaattgcatttttggtcccttaactatttaggtagtat 28112762  T

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Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 28970422 - 28970464
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||    
T  28970422 taaattgcatttttggtcctttaactatttaggtagtatcgct 28970464  T

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Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 31125939 - 31125981
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||    
T  31125939 taaattgcatttttgatcccttaactatttaggtagtatcgct 31125981  T

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Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 35986235 - 35986277
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||    
T  35986235 taaattgcatttttgttcccttaactatttaggtagtatcgct 35986277  T

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Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 37199307 - 37199265
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatc 138  Q
    |||||||||||||||||||| |||||| ||||||| |||||||    
T  37199307 ggttaaattgcatttttggttccttaactatttaggtagtatc 37199265  T

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Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 50921474 - 50921432
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||    
T  50921474 taaattacatttttggtcccttaactatttaggtagtatcgct 50921432  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 2125584 - 2125543
Alignment:
Q  100 aaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||    
T  2125584 aaattacatttttggtcccttaattatttaggtagtatcgct 2125543  T

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Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 10654033 - 10654070
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagta 136  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  10654033 taaattgcatttttggtcccttaattatttaggtagta 10654070  T

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Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 19885982 - 19886027
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||||||||||| |||||   ||||||||||    
T  19885982 ggttaaattgcatttttggtcccttaactatttttgtagtatcgct 19886027  T

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Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 29256832 - 29256877
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||  |||||||||||||||| ||||||| ||||||||||    
T  29256832 ggttaaattatatttttggtcccttaactatttaggtagtatcgct 29256877  T

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Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 40703247 - 40703206
Alignment:
Q  100 aaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||||||||||||||||||| ||||||  ||||||||||    
T  40703247 aaattgcatttttggtcccttaactatttaattagtatcgct 40703206  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 11395043 - 11395007
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagt 135  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  11395043 taaattgcatttttggtcccttaactatttaggtagt 11395007  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 14776118 - 14776078
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||||||||||||||| ||||| ||||||| ||||||||    
T  14776118 taaattgcatttttggtcacttaactatttaggtagtatcg 14776078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 42607885 - 42607845
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    ||||||| ||||||| |||||||| ||||||||||||||||    
T  42607885 taaattgtatttttgatcccttaattatttagatagtatcg 42607845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 51692253 - 51692213
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcg 139  Q
    |||||||||||||||||||||||| ||||||| || |||||    
T  51692253 taaattgcatttttggtcccttaactatttaggtaatatcg 51692213  T

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Target: scaffold0809 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 4701 - 4659
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  4701 taaattgcatttttggtcccttaactatttaggtagtatcgct 4659  T

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Target: scaffold0809; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 4338 - 4372
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttag 130  Q
    ||||||||||||||||||||||||||| |||||||    
T  4338 ggttaaattgcatttttggtcccttaactatttag 4372  T

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Target: scaffold0168 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 11491 - 11533
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| |||||||| |||||||||    
T  11491 taaattgcatttttggtcccttaactatttagaaagtatcgct 11533  T

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Target: scaffold0168; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 11870 - 11828
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  11870 taaattgcatttttggtcccttaactatttaggtagtatcgct 11828  T

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Target: scaffold0051 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 40355 - 40397
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  40355 taaattgtatttttggtcccttaattatttagatagtatcgct 40397  T

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Target: scaffold0051; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 40735 - 40697
Alignment:
Q  99 taaattgcatttttggtcccttaaatatttagatagtat 137  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  40735 taaattgcatttttggtcccttaactatttaggtagtat 40697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 13927 - 13882
Alignment:
Q  96 ggttaaattgcatttttggtcccttaaatatttagatagtatcgct 141  Q
    |||||||||| |||||||||||| ||| ||||||| ||||||||||    
T  13927 ggttaaattgtatttttggtcccctaactatttaggtagtatcgct 13882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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