View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4044_low_7 (Length: 387)

Name: NF4044_low_7
Description: NF4044
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4044_low_7
NF4044_low_7
[»] chr8 (42 HSPs)
chr8 (112-369)||(30797055-30797319)
chr8 (260-310)||(15187632-15187682)
chr8 (261-310)||(3890561-3890610)
chr8 (261-310)||(14128936-14128985)
chr8 (261-308)||(32393932-32393979)
chr8 (295-337)||(32393853-32393895)
chr8 (261-310)||(1645909-1645958)
chr8 (261-310)||(24844803-24844852)
chr8 (241-310)||(34665454-34665523)
chr8 (261-310)||(39772745-39772794)
chr8 (262-310)||(27782062-27782110)
chr8 (261-308)||(24211497-24211544)
chr8 (240-310)||(3596964-3597034)
chr8 (240-310)||(25581162-25581232)
chr8 (260-310)||(31347725-31347775)
chr8 (295-333)||(37132686-37132724)
chr8 (240-310)||(42754965-42755035)
chr8 (295-332)||(1645993-1646030)
chr8 (261-310)||(6108177-6108226)
chr8 (295-332)||(15187560-15187597)
chr8 (261-310)||(17841794-17841843)
chr8 (261-310)||(20091745-20091794)
chr8 (295-332)||(24211581-24211618)
chr8 (295-332)||(32064745-32064782)
chr8 (295-332)||(34665382-34665419)
chr8 (261-310)||(37985999-37986048)
chr8 (261-310)||(40780073-40780122)
chr8 (261-310)||(41819722-41819771)
chr8 (262-310)||(7022050-7022098)
chr8 (261-308)||(10044417-10044464)
chr8 (240-307)||(26042036-26042103)
chr8 (295-334)||(35353039-35353078)
chr8 (295-332)||(17841878-17841915)
chr8 (295-332)||(20091829-20091866)
chr8 (295-332)||(26042144-26042181)
chr8 (261-310)||(35353113-35353162)
chr8 (295-332)||(40780157-40780194)
chr8 (295-332)||(42755070-42755107)
chr8 (299-331)||(14128865-14128897)
chr8 (295-331)||(27782145-27782181)
chr8 (261-309)||(30834991-30835039)
chr8 (296-332)||(41819807-41819843)
[»] chr3 (39 HSPs)
chr3 (261-329)||(40327878-40327946)
chr3 (261-308)||(8320528-8320575)
chr3 (240-310)||(3089489-3089559)
chr3 (240-310)||(6041956-6042026)
chr3 (264-310)||(22426291-22426337)
chr3 (261-310)||(42297936-42297985)
chr3 (261-310)||(48160977-48161026)
chr3 (295-335)||(6041881-6041921)
chr3 (295-335)||(37217081-37217121)
chr3 (295-335)||(48160902-48160942)
chr3 (295-334)||(3456062-3456101)
chr3 (240-310)||(3574449-3574520)
chr3 (243-310)||(24343619-24343686)
chr3 (240-310)||(2754789-2754859)
chr3 (264-310)||(33113865-33113911)
chr3 (240-310)||(42297426-42297496)
chr3 (264-310)||(46918974-46919020)
chr3 (295-332)||(2754717-2754754)
chr3 (261-310)||(3137358-3137407)
chr3 (295-332)||(3574555-3574592)
chr3 (295-332)||(11347268-11347305)
chr3 (261-310)||(11347340-11347389)
chr3 (295-348)||(33113778-33113830)
chr3 (261-310)||(33145784-33145833)
chr3 (261-310)||(33839603-33839652)
chr3 (261-310)||(34482854-34482903)
chr3 (295-332)||(42297353-42297390)
chr3 (295-334)||(30385009-30385048)
chr3 (261-308)||(30385085-30385132)
chr3 (261-308)||(37216997-37217044)
chr3 (261-308)||(41883167-41883214)
chr3 (260-310)||(8361988-8362038)
chr3 (261-311)||(37522124-37522174)
chr3 (295-332)||(3137442-3137479)
chr3 (261-310)||(3456136-3456185)
chr3 (295-332)||(8320612-8320649)
chr3 (295-332)||(24343547-24343584)
chr3 (295-332)||(34482938-34482975)
chr3 (261-310)||(42921215-42921264)
[»] chr1 (33 HSPs)
chr1 (261-332)||(51620980-51621051)
chr1 (261-310)||(25463748-25463797)
chr1 (261-310)||(40215060-40215109)
chr1 (261-333)||(52329318-52329390)
chr1 (261-308)||(3559691-3559738)
chr1 (261-310)||(18404514-18404563)
chr1 (240-309)||(20305054-20305123)
chr1 (260-335)||(7335420-7335496)
chr1 (240-308)||(51737579-51737647)
chr1 (261-308)||(27523199-27523246)
chr1 (295-337)||(18404437-18404479)
chr1 (260-310)||(25973485-25973535)
chr1 (240-310)||(37821757-37821827)
chr1 (295-333)||(40214987-40215025)
chr1 (261-310)||(6883559-6883608)
chr1 (261-310)||(9910237-9910286)
chr1 (265-310)||(16045746-16045791)
chr1 (261-310)||(19015476-19015525)
chr1 (261-310)||(36966652-36966701)
chr1 (261-310)||(44094770-44094819)
chr1 (295-335)||(9910321-9910361)
chr1 (295-334)||(32000295-32000334)
chr1 (295-334)||(36966736-36966775)
chr1 (240-307)||(41876365-41876432)
chr1 (295-333)||(37821862-37821900)
chr1 (295-328)||(16045826-16045859)
chr1 (295-332)||(19015404-19015441)
chr1 (295-332)||(25463676-25463713)
chr1 (295-332)||(34519758-34519795)
chr1 (295-332)||(44094698-44094735)
chr1 (261-310)||(44690973-44691022)
chr1 (262-310)||(32000212-32000260)
chr1 (260-308)||(33786578-33786626)
[»] chr2 (22 HSPs)
chr2 (240-329)||(40262659-40262748)
chr2 (260-310)||(13354918-13354968)
chr2 (260-310)||(21936153-21936203)
chr2 (261-310)||(3989148-3989197)
chr2 (240-310)||(31174757-31174827)
chr2 (295-334)||(21936079-21936118)
chr2 (294-332)||(9293603-9293641)
chr2 (261-310)||(7475452-7475501)
chr2 (261-310)||(9293520-9293569)
chr2 (261-310)||(10661959-10662008)
chr2 (261-310)||(23268006-23268055)
chr2 (261-310)||(33380279-33380328)
chr2 (295-332)||(35160757-35160794)
chr2 (261-310)||(35160829-35160878)
chr2 (295-331)||(10661888-10661924)
chr2 (261-308)||(9723479-9723526)
chr2 (295-332)||(7475536-7475573)
chr2 (295-332)||(13354846-13354883)
chr2 (295-332)||(14941394-14941431)
chr2 (295-332)||(23268090-23268127)
chr2 (295-332)||(33380207-33380244)
chr2 (266-310)||(14941315-14941359)
[»] chr4 (35 HSPs)
chr4 (240-326)||(9111321-9111407)
chr4 (261-310)||(7745056-7745105)
chr4 (261-310)||(10442733-10442782)
chr4 (261-310)||(17655502-17655551)
chr4 (261-310)||(22199333-22199382)
chr4 (261-310)||(23964409-23964458)
chr4 (295-334)||(2624835-2624874)
chr4 (295-334)||(22199259-22199298)
chr4 (295-334)||(49387916-49387955)
chr4 (264-310)||(33530635-33530681)
chr4 (240-310)||(44893136-44893206)
chr4 (240-310)||(44893498-44893568)
chr4 (295-332)||(4751446-4751483)
chr4 (261-310)||(4751518-4751567)
chr4 (261-310)||(9088942-9088991)
chr4 (295-332)||(10442817-10442854)
chr4 (261-310)||(21802266-21802315)
chr4 (261-310)||(24128311-24128360)
chr4 (261-310)||(31078763-31078812)
chr4 (295-332)||(31078847-31078884)
chr4 (295-332)||(33530716-33530753)
chr4 (295-332)||(36072947-36072984)
chr4 (261-310)||(36073019-36073068)
chr4 (299-332)||(37934973-37935006)
chr4 (261-310)||(46441916-46441965)
chr4 (261-310)||(47290138-47290187)
chr4 (261-310)||(49387832-49387881)
chr4 (261-310)||(53123103-53123152)
chr4 (295-331)||(7745140-7745176)
chr4 (295-343)||(24392656-24392704)
chr4 (295-342)||(47290056-47290103)
chr4 (295-332)||(21802350-21802387)
chr4 (295-332)||(24128239-24128276)
chr4 (261-310)||(50156522-50156571)
chr4 (240-308)||(36073424-36073492)
[»] scaffold0665 (2 HSPs)
scaffold0665 (261-310)||(3140-3189)
scaffold0665 (299-331)||(3069-3101)
[»] scaffold0096 (2 HSPs)
scaffold0096 (261-310)||(41083-41132)
scaffold0096 (299-332)||(41011-41044)
[»] chr7 (27 HSPs)
chr7 (240-308)||(3962053-3962121)
chr7 (240-310)||(15329345-15329415)
chr7 (264-310)||(42611883-42611929)
chr7 (261-310)||(34482907-34482956)
chr7 (295-335)||(4974763-4974803)
chr7 (295-335)||(24394969-24395009)
chr7 (295-333)||(3961978-3962016)
chr7 (240-310)||(29737211-29737281)
chr7 (295-333)||(48880955-48880993)
chr7 (295-332)||(15329273-15329310)
chr7 (295-332)||(15577878-15577915)
chr7 (261-310)||(30848641-30848690)
chr7 (295-332)||(42611811-42611848)
chr7 (295-332)||(45637712-45637749)
chr7 (261-310)||(45637784-45637833)
chr7 (261-310)||(48880871-48880920)
chr7 (299-335)||(20010129-20010165)
chr7 (295-334)||(34482833-34482872)
chr7 (240-310)||(35444630-35444700)
chr7 (261-310)||(4974679-4974728)
chr7 (261-306)||(15577794-15577839)
chr7 (261-310)||(20010042-20010091)
chr7 (261-310)||(24395044-24395093)
chr7 (261-310)||(25167794-25167843)
chr7 (295-332)||(37477108-37477145)
chr7 (306-334)||(20953143-20953171)
chr7 (260-308)||(37477023-37477071)
[»] chr6 (27 HSPs)
chr6 (261-308)||(18365517-18365564)
chr6 (261-308)||(18370781-18370828)
chr6 (261-310)||(33695271-33695320)
chr6 (261-310)||(33696768-33696817)
chr6 (261-309)||(8515670-8515718)
chr6 (264-319)||(10261955-10262010)
chr6 (240-310)||(2309346-2309416)
chr6 (295-333)||(17705493-17705531)
chr6 (263-308)||(6031687-6031732)
chr6 (295-332)||(6127275-6127312)
chr6 (261-310)||(17175965-17176014)
chr6 (261-310)||(17705409-17705458)
chr6 (295-332)||(23291112-23291149)
chr6 (295-332)||(28675148-28675185)
chr6 (295-332)||(33695355-33695392)
chr6 (295-332)||(33696696-33696733)
chr6 (264-310)||(6127347-6127394)
chr6 (299-334)||(17176053-17176088)
chr6 (261-308)||(25987004-25987051)
chr6 (261-310)||(9752189-9752238)
chr6 (299-332)||(18365605-18365638)
chr6 (299-332)||(18370869-18370902)
chr6 (261-310)||(23291028-23291077)
chr6 (295-332)||(25986930-25986967)
chr6 (261-310)||(28675220-28675269)
chr6 (297-329)||(8515755-8515787)
chr6 (262-310)||(32702277-32702325)
[»] chr5 (30 HSPs)
chr5 (261-310)||(8145447-8145496)
chr5 (261-310)||(11361075-11361124)
chr5 (295-334)||(11361159-11361198)
chr5 (261-308)||(14138742-14138789)
chr5 (261-308)||(37321737-37321784)
chr5 (264-310)||(2477708-2477754)
chr5 (295-333)||(12850800-12850838)
chr5 (240-310)||(38899649-38899719)
chr5 (295-332)||(2477636-2477673)
chr5 (295-332)||(3362778-3362815)
chr5 (261-310)||(3362850-3362899)
chr5 (261-310)||(4892274-4892323)
chr5 (295-332)||(6043539-6043576)
chr5 (261-310)||(12614677-12614726)
chr5 (261-310)||(12850873-12850922)
chr5 (261-310)||(25398310-25398359)
chr5 (261-310)||(31640884-31640933)
chr5 (295-332)||(38899754-38899791)
chr5 (295-335)||(22913082-22913122)
chr5 (261-308)||(33584273-33584320)
chr5 (295-334)||(33584357-33584396)
chr5 (260-310)||(22912997-22913047)
chr5 (261-310)||(4433951-4434000)
chr5 (295-332)||(4892202-4892239)
chr5 (295-332)||(12614761-12614798)
chr5 (275-332)||(13664642-13664699)
chr5 (295-332)||(14138668-14138705)
chr5 (295-332)||(25398238-25398275)
chr5 (262-310)||(3521951-3521999)
chr5 (295-335)||(3522034-3522074)
[»] scaffold0204 (2 HSPs)
scaffold0204 (240-310)||(4468-4538)
scaffold0204 (295-332)||(4396-4433)
[»] scaffold0178 (2 HSPs)
scaffold0178 (295-333)||(11620-11658)
scaffold0178 (240-310)||(11693-11763)
[»] scaffold0471 (2 HSPs)
scaffold0471 (261-310)||(12914-12963)
scaffold0471 (295-332)||(12842-12879)
[»] scaffold0085 (2 HSPs)
scaffold0085 (261-310)||(47922-47971)
scaffold0085 (295-332)||(47850-47887)
[»] scaffold0228 (3 HSPs)
scaffold0228 (261-310)||(8474-8523)
scaffold0228 (261-310)||(16056-16105)
scaffold0228 (261-310)||(26008-26057)


Alignment Details
Target: chr8 (Bit Score: 144; Significance: 1e-75; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 112 - 369
Target Start/End: Complemental strand, 30797319 - 30797055
Alignment:
Q  112 cggaaatgcttgttatagcgaataattgcatcacgagaatttccagaaaacgtgggaaactaatagcctttagatctctgttttattacattacggtttc 211  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  30797319 cggaaatgcttgttaaagcgaataattgcatcacaagaatttccagaaaacgtgggaaactaatagcctttagatctctgttttattagattacgatttc 30797220  T
Q  212 atnnnnnnnnn-------gtacataagaccggtgacccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgata 304  Q
    ||                ||||||||||||    ||||||||||| |||| |  |||| |||||||||||||||||||||||||||||||||| || |||    
T  30797219 ataaaaaaaaaaaaaaaagtacataagacccaccacccatgatttccggttagggagaaattttattggctaacatcaatttcgagactattttttaata 30797120  T
Q  305 aaatcttttttgatatatagcattgctcattgaaaaaatgtggtgtgcatggtgggggcattacg 369  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  30797119 aaatcttttttgatatatagcattgatcattgagaaaatgtggtgtgcatggtgggggcattacg 30797055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 15187682 - 15187632
Alignment:
Q  260 agagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  15187682 agagattttattggctaacattaatttcaagactatttcttgataaaatct 15187632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 3890561 - 3890610
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  3890561 gagattttattggctaacattaatttcgagacaatttcttgataaaatct 3890610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 14128985 - 14128936
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  14128985 gagattttattggctaacattaatttcaagactatttcttgataaaatct 14128936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 308
Target Start/End: Complemental strand, 32393979 - 32393932
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||    
T  32393979 gagattttattggctaacattaatttcaagactatttcttgataaaat 32393932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 32393895 - 32393853
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcattga 337  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  32393895 tttcttgataaaatctttcttgatatatagcattgctcattga 32393853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 1645909 - 1645958
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||||    
T  1645909 gagattttattagctaacattaatttcaagactatttcttgataaaatct 1645958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 24844803 - 24844852
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  24844803 gagattttattggctaacattaatttcgggacaatttcttgataaaatct 24844852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 310
Target Start/End: Complemental strand, 34665523 - 34665454
Alignment:
Q  241 ccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||   |||||||||||||||||||| ||||||  ||| |||||||||||||||||    
T  34665523 ccatgattttcggccaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 34665454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 39772745 - 39772794
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||||||    
T  39772745 gagattttattggctaacattaatttcaagactattttttgataaaatct 39772794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 27782062 - 27782110
Alignment:
Q  262 agattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  27782062 agattttattggctaacattaatttcaagacaatttcttgataaaatct 27782110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 24211497 - 24211544
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    ||||||||||||| |||||| |||||| ||||||||||||||||||||    
T  24211497 gagattttattggttaacattaatttcaagactatttcttgataaaat 24211544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 3596964 - 3597034
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||| ||||||    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  3596964 cccatgatttccggtcaggctgagattttattggttaacattaatttcaggactatttcttgataaaatct 3597034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 25581162 - 25581232
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||| ||||||    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  25581162 cccatgatttccggtcaggctgagattttattggttaacattaatttcaggactatttcttgataaaatct 25581232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 31347725 - 31347775
Alignment:
Q  260 agagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||||||||||| ||||||  ||| |||||||||||||||||    
T  31347725 agagattttattggctaacattaatttcaggacaatttcttgataaaatct 31347775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 333
Target Start/End: Original strand, 37132686 - 37132724
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctca 333  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  37132686 tttcttgataaaatattttttgatatatagcattgctca 37132724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 42754965 - 42755035
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||| ||    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  42754965 cccatgattttcggccaggctgagattttattggttaacattaatttcatgactatttcttgataaaatct 42755035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 1645993 - 1646030
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  1645993 tttcttgataaaatctttcttgatatatagcattgctc 1646030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 6108177 - 6108226
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  6108177 gagattttattggttaacattaatttcaggactatttcttgataaaatct 6108226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 15187597 - 15187560
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  15187597 tttcttgataaaatctttcttgatatatagcattgctc 15187560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 17841794 - 17841843
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  17841794 gagattttattggttaacattaatttcaggactatttcttgataaaatct 17841843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 20091745 - 20091794
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  ||| |||||||||||||||||    
T  20091745 gagattttattggctaacattaatttcaggacgatttcttgataaaatct 20091794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 24211581 - 24211618
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  24211581 tttcttgataaaatctttcttgatatatagcattgctc 24211618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 32064782 - 32064745
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  32064782 tttcttgataaaatctttcttgatatatagcattgctc 32064745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 34665419 - 34665382
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  34665419 tttcttgataaaatctttcttgatatatagcattgctc 34665382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 37985999 - 37986048
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||| ||| ||||||  |||||||||||||||||||||    
T  37985999 gagattttattggctagcattaatttcaggactatttcttgataaaatct 37986048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 40780073 - 40780122
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  40780073 gagattttattggttaacattaatttcaggactatttcttgataaaatct 40780122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 41819722 - 41819771
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  ||| |||||||||||||||||    
T  41819722 gagattttattggctaacattaatttcaggacaatttcttgataaaatct 41819771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 7022098 - 7022050
Alignment:
Q  262 agattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||||||||| |||||||  || |||||||||||||||||    
T  7022098 agattttattggctaacattaatttcggtacaatttcttgataaaatct 7022050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 308
Target Start/End: Complemental strand, 10044464 - 10044417
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    |||||||||||||||||||| |||| | | ||||||||||||||||||    
T  10044464 gagattttattggctaacattaattccaaaactatttcttgataaaat 10044417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 26042036 - 26042103
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaa 307  Q
    |||||||||| ||||||    ||||||||||||| |||||| ||||||  ||||||||||||||||||    
T  26042036 cccatgatttccggtcaggctgagattttattggttaacattaatttcaggactatttcttgataaaa 26042103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 35353078 - 35353039
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcat 334  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  35353078 tttcttgaaaaaatctttcttgatatatagcattgctcat 35353039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 17841878 - 17841915
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  17841878 tttcttgaaaaaatctttcttgatatatagcattgctc 17841915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 20091829 - 20091866
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  20091829 tttcttgataaaatatttcttgatatatagcattgctc 20091866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 26042144 - 26042181
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| || ||||||||||||||||    
T  26042144 tttcttgataaaatctttcttaatatatagcattgctc 26042181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 35353162 - 35353113
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  || ||||||||||||||||||    
T  35353162 gagattttattggttaacattaatttcatgattatttcttgataaaatct 35353113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 40780157 - 40780194
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  40780157 tttcttgaaaaaatctttcttgatatatagcattgctc 40780194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 42755070 - 42755107
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  42755070 tttcttgataaaatctttcttgatatatatcattgctc 42755107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 331
Target Start/End: Complemental strand, 14128897 - 14128865
Alignment:
Q  299 ttgataaaatcttttttgatatatagcattgct 331  Q
    |||||||||||||| ||||||||||||||||||    
T  14128897 ttgataaaatctttcttgatatatagcattgct 14128865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 331
Target Start/End: Original strand, 27782145 - 27782181
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgct 331  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  27782145 tttcttgataaaatatttcttgatatatagcattgct 27782181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 309
Target Start/End: Original strand, 30834991 - 30835039
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatc 309  Q
    |||||||||||| ||||||| ||||||  ||| ||||||||||||||||    
T  30834991 gagattttattgactaacattaatttcaggacaatttcttgataaaatc 30835039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 332
Target Start/End: Original strand, 41819807 - 41819843
Alignment:
Q  296 ttcttgataaaatcttttttgatatatagcattgctc 332  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  41819807 ttcttgataaaatctttcttgatatataacattgctc 41819843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 6e-19; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 40327946 - 40327878
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatcttttttgatatatagcattg 329  Q
    |||||||||||||||||||| ||||||  ||| ||||||||||||||||||| ||||||||||||||||    
T  40327946 gagattttattggctaacattaatttcaggacaatttcttgataaaatctttcttgatatatagcattg 40327878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 8320528 - 8320575
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||    
T  8320528 gagattttattggctaacattaatttcaagactatttcttgataaaat 8320575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 3089559 - 3089489
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||| ||| |||   |||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  3089559 cccatgatttccggccaagctgagattttattggctaacattaatttcaagaatatttcttgataaaatct 3089489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 6042026 - 6041956
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||| ||||||    |||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  6042026 cccatgatttccggtcaggctgagattttattggctaacattaatttcaggactatttcttgataaaatct 6041956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 22426291 - 22426337
Alignment:
Q  264 attttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  22426291 attttattggctaacattaatttcaagactatttcttgataaaatct 22426337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 42297985 - 42297936
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  42297985 gagattttattggctaacattaatttcaggactatttcttgataaaatct 42297936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 48161026 - 48160977
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||||||| || |||||| ||||||||||||||||||||||    
T  48161026 gagattttattggctaatattaatttcaagactatttcttgataaaatct 48160977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 6041921 - 6041881
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcatt 335  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  6041921 tttcttgataaaatctttcttgatatatagcattgctcatt 6041881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 37217081 - 37217121
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcatt 335  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  37217081 tttcttgataaaatctttcttgatatatagcattgctcatt 37217121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 48160942 - 48160902
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcatt 335  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  48160942 tttcttgataaaatctttcttgatatatagcattgctcatt 48160902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 3456101 - 3456062
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcat 334  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  3456101 tttcttgataaaatctttcttgatatatagcattgctcat 3456062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 3574449 - 3574520
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaa-tttcgagactatttcttgataaaatct 310  Q
    |||||||||| ||| |||   |||||||||||||||||||| || |||| ||||||||||||||||||||||    
T  3574449 cccatgatttccggccaagctgagattttattggctaacattaattttcaagactatttcttgataaaatct 3574520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 310
Target Start/End: Complemental strand, 24343686 - 24343619
Alignment:
Q  243 atgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||||    |||||||||||||||||||| |||||||  || |||||||||||||||||    
T  24343686 atgattttcggtcaggatgagattttattggctaacattaatttcggaacaatttcttgataaaatct 24343619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 2754859 - 2754789
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||| ||||||    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  2754859 cccatgatttccggtcaggctgagattttattggttaacattaatttcaggactatttcttgataaaatct 2754789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 33113911 - 33113865
Alignment:
Q  264 attttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||    
T  33113911 attttattggctaacattaatttcaggactatttcttgataaaatct 33113865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 42297496 - 42297426
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||| ||||||    |||||||||||||||||||| ||||||   ||||||||||||||||||||    
T  42297496 cccatgatttccggtcaggctgagattttattggctaacattaatttcagaactatttcttgataaaatct 42297426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 46919020 - 46918974
Alignment:
Q  264 attttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||| |||||||| ||||||||||| |||||||||||||||||    
T  46919020 attttatttgctaacattaatttcgagacaatttcttgataaaatct 46918974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 2754754 - 2754717
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  2754754 tttcttgataaaatctttcttgatatatagcattgctc 2754717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 3137358 - 3137407
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  3137358 gagattttattggttaacattaatttcaggactatttcttgataaaatct 3137407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 3574555 - 3574592
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  3574555 tttcttgataaaatctttcttgatatatagcattgctc 3574592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 11347305 - 11347268
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  11347305 tttcttgataaaatctttcttgatatatagcattgctc 11347268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 11347389 - 11347340
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  ||||||||| |||||||||||    
T  11347389 gagattttattggctaacattaatttcaggactatttcctgataaaatct 11347340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 33113830 - 33113778
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcattgaaaaaatgtggt 348  Q
    |||||| ||||||||||| ||||||||||||||||||| || ||||||||||||    
T  33113830 tttcttaataaaatctttcttgatatatagcattgctc-ttaaaaaaatgtggt 33113778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 33145833 - 33145784
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  ||| |||||||||||||||||    
T  33145833 gagattttattggctaacattaatttcaggacaatttcttgataaaatct 33145784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 33839652 - 33839603
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| |||||| | || |||||||||||||||||    
T  33839652 gagattttattggctaacattaatttcaaaacaatttcttgataaaatct 33839603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 34482854 - 34482903
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  34482854 gagattttattggttaacattaatttcaggactatttcttgataaaatct 34482903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 42297390 - 42297353
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  42297390 tttcttgataaaatctttcttgatatatagcattgctc 42297353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 30385048 - 30385009
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcat 334  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  30385048 tttcttgataaaatctttcttgataaatagcattgctcat 30385009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 308
Target Start/End: Complemental strand, 30385132 - 30385085
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||    
T  30385132 gagattttattggttaacattaatttcaggactatttcttgataaaat 30385085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 37216997 - 37217044
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||    
T  37216997 gagattttattggttaacattaatttcatgactatttcttgataaaat 37217044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 41883167 - 41883214
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    |||||||||||| ||||||| ||||||| ||| |||||||||||||||    
T  41883167 gagattttattgactaacattaatttcgggacaatttcttgataaaat 41883214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 8361988 - 8362038
Alignment:
Q  260 agagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||||||||||| ||||||   || |||||||||||||||||    
T  8361988 agagattttattggctaacattaatttcagtacaatttcttgataaaatct 8362038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 37522174 - 37522124
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatctt 311  Q
    ||||||||||||| |||||| ||||||  ||||||||||| ||||||||||    
T  37522174 gagattttattggttaacattaatttcatgactatttctttataaaatctt 37522124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 3137442 - 3137479
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  3137442 tttcttgaaaaaatctttcttgatatatagcattgctc 3137479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 3456185 - 3456136
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| |||| |  |||||||||||||||||||||    
T  3456185 gagattttattggttaacattaattccaggactatttcttgataaaatct 3456136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 8320612 - 8320649
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  8320612 tttcttgataaaatctttcttgatatataacattgctc 8320649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 24343584 - 24343547
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| || ||||||||||||||||    
T  24343584 tttcttgataaaatctttcttaatatatagcattgctc 24343547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 34482938 - 34482975
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  34482938 tttcttgaaaaaatctttcttgatatatagcattgctc 34482975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 42921264 - 42921215
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| || |||  ||| |||||||||||||||||    
T  42921264 gagattttattggctaacattaaattcaggacaatttcttgataaaatct 42921215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 261 - 332
Target Start/End: Complemental strand, 51621051 - 51620980
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||| ||||||| ||||||  ||||||||||| ||||||||||| |||||||||||||||||||    
T  51621051 gagattttattgactaacattaatttctggactatttcttaataaaatctttcttgatatatagcattgctc 51620980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 25463797 - 25463748
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  25463797 gagattttattggctaacattaatttcaagactatttcttgataaaatct 25463748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 40215109 - 40215060
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  40215109 gagattttattggctaacattaatttcaagactatttcttgataaaatct 40215060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 333
Target Start/End: Complemental strand, 52329390 - 52329318
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatcttttttgatatatagcattgctca 333  Q
    ||||||||||||| |||||| |||||||  ||| |||||||||||| ||||| |||||||||| |||||||||    
T  52329390 gagattttattggttaacattaatttcggaactctttcttgataaattctttcttgatatataacattgctca 52329318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 308
Target Start/End: Complemental strand, 3559738 - 3559691
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||    
T  3559738 gagattttattggctaacattaatttcaagactatttcttgataaaat 3559691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 18404563 - 18404514
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  18404563 gagattttattggctaacattaatttcaggactatttcttgataaaatct 18404514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 20305054 - 20305123
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatc 309  Q
    |||||||||||||| |||   |||||||||||||||||||| ||||||  || |||||||||||||||||    
T  20305054 cccatgattttcggccaagctgagattttattggctaacattaatttcaggattatttcttgataaaatc 20305123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 335
Target Start/End: Complemental strand, 7335496 - 7335420
Alignment:
Q  260 agagattttattggctaacatcaatttcgagactatttcttgat-aaaatcttttttgatatatagcattgctcatt 335  Q
    ||||||||||||||||||  | ||||||||||||||||| |||| ||||  ||| ||||||||||||||| ||||||    
T  7335496 agagattttattggctaattttaatttcgagactatttcgtgataaaaaaatttcttgatatatagcattactcatt 7335420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 51737647 - 51737579
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    |||||||||||||||||    ||||||||||||| |||||| ||||||  |||||||||||||||||||    
T  51737647 cccatgattttcggtcaggctgagattttattggttaacattaatttcaggactatttcttgataaaat 51737579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 27523199 - 27523246
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  27523199 gagattttattggctaacattaatttcgggacaatttcttgataaaat 27523246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 18404479 - 18404437
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcattga 337  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  18404479 tttcttgataaaatctttcttgatatatagcattgctctttga 18404437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 25973535 - 25973485
Alignment:
Q  260 agagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||||||||||| ||||||  || ||||||||||||||||||    
T  25973535 agagattttattggctaacattaatttcaggattatttcttgataaaatct 25973485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 37821757 - 37821827
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||| ||    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  37821757 cccatgattttcggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatct 37821827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 333
Target Start/End: Complemental strand, 40215025 - 40214987
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctca 333  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  40215025 tttcttgataaaatctttcttgatatatagcattgctca 40214987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 6883608 - 6883559
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  6883608 gagattttattggttaacattaatttcaggactatttcttgataaaatct 6883559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 9910237 - 9910286
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  9910237 gagattttattggttaacattaatttcaggactatttcttgataaaatct 9910286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 265 - 310
Target Start/End: Original strand, 16045746 - 16045791
Alignment:
Q  265 ttttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||    
T  16045746 ttttattggctaacattaatttcaagaatatttcttgataaaatct 16045791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 19015525 - 19015476
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  19015525 gagattttattggttaacattaatttcaggactatttcttgataaaatct 19015476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 36966652 - 36966701
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  36966652 gagattttattggttaacattaatttcaggactatttcttgataaaatct 36966701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 44094819 - 44094770
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  || ||||||||||||||||||    
T  44094819 gagattttattggctaacattaatttcaggattatttcttgataaaatct 44094770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 9910321 - 9910361
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcatt 335  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  9910321 tttcttgaaaaaatctttcttgatatatagcattgctcatt 9910361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 32000295 - 32000334
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcat 334  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  32000295 tttcttgagaaaatctttcttgatatatagcattgctcat 32000334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 36966736 - 36966775
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcat 334  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  36966736 tttcttgaaaaaatctttcttgatatatagcattgctcat 36966775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 41876365 - 41876432
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaa 307  Q
    |||||||||||||| ||    ||||||||||||| |||||| ||||||  ||||||||||||||||||    
T  41876365 cccatgattttcggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaa 41876432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 333
Target Start/End: Original strand, 37821862 - 37821900
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctca 333  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  37821862 tttcttgaaaaaatctttcttgatatatagcattgctca 37821900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 328
Target Start/End: Original strand, 16045826 - 16045859
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcatt 328  Q
    |||||||||||||||||| |||||||||||||||    
T  16045826 tttcttgataaaatctttcttgatatatagcatt 16045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 19015441 - 19015404
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  19015441 tttcttgaaaaaatctttcttgatatatagcattgctc 19015404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 25463713 - 25463676
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  25463713 tttcttcataaaatctttcttgatatatagcattgctc 25463676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 34519795 - 34519758
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  34519795 tttcttaataaaatctttcttgatatatagcattgctc 34519758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 44094735 - 44094698
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  44094735 tttcttgataaaatatttcttgatatatagcattgctc 44094698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 44690973 - 44691022
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||| | ||  |||||||||||||||||    
T  44690973 gagattttattggctaacattaattttgggataatttcttgataaaatct 44691022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 32000212 - 32000260
Alignment:
Q  262 agattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||||||||| ||||||   || |||||||||||||||||    
T  32000212 agattttattggctaacattaatttcagtacaatttcttgataaaatct 32000260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 308
Target Start/End: Original strand, 33786578 - 33786626
Alignment:
Q  260 agagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    ||||||||||||||||||||| ||||||   || |||||||||||||||    
T  33786578 agagattttattggctaacattaatttcagtacaatttcttgataaaat 33786626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 40262659 - 40262748
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatcttttttgatatatagcattg 329  Q
    ||||| |||| ||||||  | ||||||||||||||||| || ||||||| ||| ||||||||||||||||||| |||||||||| |||||    
T  40262659 cccataatttccggtcagggtgagattttattggctaatattaatttcgggacaatttcttgataaaatctttcttgatatataacattg 40262748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 13354968 - 13354918
Alignment:
Q  260 agagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  13354968 agagattttattggctaacattaatttcaagactatttcttgataaaatct 13354918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 21936203 - 21936153
Alignment:
Q  260 agagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  21936203 agagattttattggctaacattaatttcaagactatttcttgataaaatct 21936153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 3989197 - 3989148
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  3989197 gagattttattggctaacattaatttcaagactatttcttgataaaatct 3989148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 31174757 - 31174827
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||| ||||||    |||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  31174757 cccatgatttccggtcagactgagattttattggctaacattaatttcaggactatttcttgataaaatct 31174827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 21936118 - 21936079
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcat 334  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  21936118 tttcttgataaaatctttcttgatatatagcattgctcat 21936079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 332
Target Start/End: Original strand, 9293603 - 9293641
Alignment:
Q  294 atttcttgataaaatcttttttgatatatagcattgctc 332  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  9293603 atttcttgataaaatctttcttgatatatagcattgctc 9293641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 7475452 - 7475501
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  7475452 gagattttattggttaacattaatttcaggactatttcttgataaaatct 7475501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 9293520 - 9293569
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  ||| |||||||||||||||||    
T  9293520 gagattttattggctaacattaatttcaggacaatttcttgataaaatct 9293569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 10662008 - 10661959
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  10662008 gagattttattggttaacattaatttcaggactatttcttgataaaatct 10661959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 23268006 - 23268055
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  23268006 gagattttattggttaacattaatttcaggactatttcttgataaaatct 23268055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 33380328 - 33380279
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  33380328 gagattttattggttaacattaatttcaggactatttcttgataaaatct 33380279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 35160794 - 35160757
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  35160794 tttcttgataaaatctttcttgatatatagcattgctc 35160757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 35160878 - 35160829
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  35160878 gagattttattggttaacattaatttcaggactatttcttgataaaatct 35160829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 10661924 - 10661888
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgct 331  Q
    |||||||||||||||||| ||||||||||||||||||    
T  10661924 tttcttgataaaatctttcttgatatatagcattgct 10661888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 308
Target Start/End: Complemental strand, 9723526 - 9723479
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    ||||||||||| |||||||| ||||||| ||| |||||||||||||||    
T  9723526 gagattttattagctaacattaatttcgggacaatttcttgataaaat 9723479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 7475536 - 7475573
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  7475536 tttcttgaaaaaatctttcttgatatatagcattgctc 7475573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 13354883 - 13354846
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  13354883 tttcttgataaaatctttcttgatatataacattgctc 13354846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 14941394 - 14941431
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  14941394 tttcttaataaaatctttcttgatatatagcattgctc 14941431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 23268090 - 23268127
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  23268090 tttcttgaaaaaatctttcttgatatatagcattgctc 23268127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 33380244 - 33380207
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  33380244 tttcttgaaaaaatctttcttgatatatagcattgctc 33380207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 14941315 - 14941359
Alignment:
Q  266 tttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||||| ||||||  ||| |||||||||||||||||    
T  14941315 tttattggctaacattaatttcaggacaatttcttgataaaatct 14941359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 326
Target Start/End: Complemental strand, 9111407 - 9111321
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatcttttttgatatatagca 326  Q
    |||||||||||||| ||   ||| |||||||||| |||| | ||||||||||| ||||||||||||||||||| ||| |||||||||    
T  9111407 cccatgattttcggccaggtagaaattttattggttaactttaatttcgagacaatttcttgataaaatctttcttggtatatagca 9111321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 7745056 - 7745105
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  7745056 gagattttattggctaacattaatttcaggactatttcttgataaaatct 7745105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 10442733 - 10442782
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  10442733 gagattttattggctaacattaatttcaggactatttcttgataaaatct 10442782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 17655551 - 17655502
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  17655551 gagattttattggctaacattaatttcaggactatttcttgataaaatct 17655502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 22199382 - 22199333
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  22199382 gagattttattggctaacattagtttcaagactatttcttgataaaatct 22199333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 23964409 - 23964458
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  23964409 gagattttattgactaacattaatttcaagactatttcttgataaaatct 23964458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 2624874 - 2624835
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcat 334  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  2624874 tttcttgataaaatctttcttgatatatagcattgctcat 2624835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 22199298 - 22199259
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcat 334  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  22199298 tttcttgataaaatctttcttgatatatagcattgctcat 22199259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 49387916 - 49387955
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcat 334  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  49387916 tttcttgataaaatctttcttgatatatagcattgctcat 49387955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 33530635 - 33530681
Alignment:
Q  264 attttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  33530635 attttattggctaacattagtttcaagactatttcttgataaaatct 33530681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 44893136 - 44893206
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||| ||    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  44893136 cccatgattttcggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatct 44893206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 44893568 - 44893498
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||| ||    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  44893568 cccatgattttcggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatct 44893498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 4751483 - 4751446
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  4751483 tttcttgataaaatctttcttgatatatagcattgctc 4751446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 4751567 - 4751518
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  4751567 gagattttattggttaacattaatttcaggactatttcttgataaaatct 4751518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 9088991 - 9088942
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  9088991 gagattttattggttaacattaatttcaggactatttcttgataaaatct 9088942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 10442817 - 10442854
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  10442817 tttcttgataaaatctttcttgatatatagcattgctc 10442854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 21802266 - 21802315
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  ||| |||||||||||||||||    
T  21802266 gagattttattggctaacattaatttcaggacaatttcttgataaaatct 21802315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 24128360 - 24128311
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  24128360 gagattttattggttaacattaatttcaggactatttcttgataaaatct 24128311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 31078763 - 31078812
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  31078763 gagattttattggttaacattaatttcaggactatttcttgataaaatct 31078812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 31078847 - 31078884
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  31078847 tttcttgataaaatctttcttgatatatagcattgctc 31078884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 33530716 - 33530753
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  33530716 tttcttgataaaatctttcttgatatatagcattgctc 33530753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 36072984 - 36072947
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  36072984 tttcttgataaaatctttcttgatatatagcattgctc 36072947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 36073068 - 36073019
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  36073068 gagattttattggttaacattaatttcaggactatttcttgataaaatct 36073019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 332
Target Start/End: Original strand, 37934973 - 37935006
Alignment:
Q  299 ttgataaaatcttttttgatatatagcattgctc 332  Q
    ||||||||||||||||||||||||||||||||||    
T  37934973 ttgataaaatcttttttgatatatagcattgctc 37935006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 46441965 - 46441916
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  46441965 gagattttattggttaacattaatttcaggactatttcttgataaaatct 46441916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 47290187 - 47290138
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  47290187 gagattttattggttaacattaatttcaggactatttcttgataaaatct 47290138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 49387832 - 49387881
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  49387832 gagattttattggttaacattaatttcaggactatttcttgataaaatct 49387881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 53123152 - 53123103
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  53123152 gagattttattggttaacattaatttcaggactatttcttgataaaatct 53123103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 331
Target Start/End: Original strand, 7745140 - 7745176
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgct 331  Q
    |||||||||||||||||| ||||||||||||||||||    
T  7745140 tttcttgataaaatctttcttgatatatagcattgct 7745176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 24392704 - 24392656
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcattgaaaaaat 343  Q
    |||||||| ||||||||| ||||||||||||||||||| |||| |||||    
T  24392704 tttcttgagaaaatctttcttgatatatagcattgctctttgagaaaat 24392656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 342
Target Start/End: Complemental strand, 47290103 - 47290056
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcattgaaaaaa 342  Q
    |||||||| ||||||||| ||||||||||||||||||| ||| |||||    
T  47290103 tttcttgaaaaaatctttcttgatatatagcattgctctttggaaaaa 47290056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 21802350 - 21802387
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  21802350 tttcttgataaaatatttcttgatatatagcattgctc 21802387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 24128276 - 24128239
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  24128276 tttcttgaaaaaatctttcttgatatatagcattgctc 24128239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 50156522 - 50156571
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| |||||   |||||||||||||||||||||    
T  50156522 gagattttattggttaacattaattttatgactatttcttgataaaatct 50156571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 36073492 - 36073424
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    |||||||||| ||||||    ||||||||||||| |||||| ||||||  || ||||||||||||||||    
T  36073492 cccatgatttccggtcaggctgagattttattggttaacattaatttcatgaatatttcttgataaaat 36073424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 3189 - 3140
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  3189 gagattttattggctaacattaatttcaagactatttcttgataaaatct 3140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 331
Target Start/End: Complemental strand, 3101 - 3069
Alignment:
Q  299 ttgataaaatcttttttgatatatagcattgct 331  Q
    |||||||||||||| ||||||||||||||||||    
T  3101 ttgataaaatctttcttgatatatagcattgct 3069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 41132 - 41083
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  41132 gagattttattggctaacattaatttcaagactatttcttgataaaatct 41083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 332
Target Start/End: Complemental strand, 41044 - 41011
Alignment:
Q  299 ttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||| |||||||||||||||||||    
T  41044 ttgataaaatctttcttgatatatagcattgctc 41011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 3962121 - 3962053
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    |||||||||| ||| |||   |||||||||||||||||||| |||||| ||||||||||||||||||||    
T  3962121 cccatgatttccggccaagctgagattttattggctaacattaatttcaagactatttcttgataaaat 3962053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 15329415 - 15329345
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||| ||| || |  |||||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  15329415 cccatgatttccggccagtctgagattttattgactaacattaatttcaagactatttcttgataaaatct 15329345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 42611929 - 42611883
Alignment:
Q  264 attttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  42611929 attttattggctaacattaatttcaagactatttcttgataaaatct 42611883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 34482956 - 34482907
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  34482956 gagattttattggctaacattaatttcaggactatttcttgataaaatct 34482907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 4974763 - 4974803
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcatt 335  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  4974763 tttcttgataaaatctttcttgatatatagcattgctcatt 4974803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 24395009 - 24394969
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcatt 335  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  24395009 tttcttgataaaatctttcttgatatatagcattgctcatt 24394969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 333
Target Start/End: Complemental strand, 3962016 - 3961978
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctca 333  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  3962016 tttcttgataaaatctttcttgatatatagcattgctca 3961978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 29737281 - 29737211
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||| ||||||    |||||||||||||||||||| ||||||| ||| ||||||| |||||||||    
T  29737281 cccatgatttccggtcaggttgagattttattggctaacattaatttcgggacaatttcttaataaaatct 29737211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 333
Target Start/End: Original strand, 48880955 - 48880993
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctca 333  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  48880955 tttcttgataaaatctttcttgatatatagcattgctca 48880993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 15329310 - 15329273
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  15329310 tttcttgataaaatctttcttgatatatagcattgctc 15329273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 15577878 - 15577915
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  15577878 tttcttgataaaatctttcttgatatatagcattgctc 15577915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 30848690 - 30848641
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  30848690 gagattttattggttaacattaatttcaggactatttcttgataaaatct 30848641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 42611848 - 42611811
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  42611848 tttcttgataaaatctttcttgatatatagcattgctc 42611811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 45637749 - 45637712
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  45637749 tttcttgataaaatctttcttgatatatagcattgctc 45637712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 45637833 - 45637784
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||| ||| ||||||  |||||||||||||||||||||    
T  45637833 gagattttattggctagcattaatttcaggactatttcttgataaaatct 45637784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 48880871 - 48880920
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  48880871 gagattttattggttaacattaatttcaggactatttcttgataaaatct 48880920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 335
Target Start/End: Original strand, 20010129 - 20010165
Alignment:
Q  299 ttgataaaatcttttttgatatatagcattgctcatt 335  Q
    |||||||||||||| ||||||||||||||||||||||    
T  20010129 ttgataaaatctttcttgatatatagcattgctcatt 20010165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 34482872 - 34482833
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcat 334  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  34482872 tttcttaataaaatctttcttgatatatagcattgctcat 34482833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 35444700 - 35444630
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||| ||    ||||||||||||| |||||| ||||||   ||||||||||||||||||||    
T  35444700 cccatgattttcggccaggctgagattttattggttaacattaatttcagaactatttcttgataaaatct 35444630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 4974679 - 4974728
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  ||  |||||||||||||||||    
T  4974679 gagattttattggctaacattaatttcaggataatttcttgataaaatct 4974728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 15577794 - 15577839
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaa 306  Q
    |||||| ||||||||||||| |||||| ||||| ||||||||||||    
T  15577794 gagattatattggctaacattaatttcaagactttttcttgataaa 15577839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 20010042 - 20010091
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  ||| |||| ||||||||||||    
T  20010042 gagattttattggctaacattaatttcaggacaattttttgataaaatct 20010091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 24395093 - 24395044
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||   ||||||| ||||||||||||    
T  24395093 gagattttattggctaacattaatttcagaactattttttgataaaatct 24395044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 25167794 - 25167843
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||   ||||||||||||||||||||    
T  25167794 gagattttattggttaacattaatttcagaactatttcttgataaaatct 25167843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 37477108 - 37477145
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  37477108 tttcttgagaaaatctttcttgatatatagcattgctc 37477145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 334
Target Start/End: Original strand, 20953143 - 20953171
Alignment:
Q  306 aatcttttttgatatatagcattgctcat 334  Q
    |||||||||||||||||||||||||||||    
T  20953143 aatcttttttgatatatagcattgctcat 20953171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 308
Target Start/End: Original strand, 37477023 - 37477071
Alignment:
Q  260 agagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    ||||||||||||||||||||| ||||||   || |||||||||||||||    
T  37477023 agagattttattggctaacattaatttcagtacaatttcttgataaaat 37477071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 18365517 - 18365564
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||    
T  18365517 gagattttattggctaacattaatttcaagactatttcttgataaaat 18365564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 18370781 - 18370828
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||    
T  18370781 gagattttattggctaacattaatttcaagactatttcttgataaaat 18370828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 33695271 - 33695320
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  33695271 gagattttattggctaacattaatttcaggactatttcttgataaaatct 33695320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 33696817 - 33696768
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  33696817 gagattttattggctaacattaatttcaggactatttcttgataaaatct 33696768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 309
Target Start/End: Original strand, 8515670 - 8515718
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatc 309  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||||||||    
T  8515670 gagattttattggctaacattaatttcgggacaatttcttgataaaatc 8515718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 10262010 - 10261955
Alignment:
Q  264 attttattggctaacatcaatttcgagactatttcttgataaaatcttttttgata 319  Q
    |||||||||||||||||||||||||||||| |||| | |||||||| || ||||||    
T  10262010 attttattggctaacatcaatttcgagactgtttcgtaataaaatcgttcttgata 10261955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 2309346 - 2309416
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||| ||| |||   |||||||||||||||||||| ||||||  ||| |||||||||||||||||    
T  2309346 cccatgatttccggccaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 2309416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 333
Target Start/End: Original strand, 17705493 - 17705531
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctca 333  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  17705493 tttcttgataaaatctttcttgatatatagcattgctca 17705531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 308
Target Start/End: Original strand, 6031687 - 6031732
Alignment:
Q  263 gattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    ||||||||||| |||||| |||||| ||||||||||||||||||||    
T  6031687 gattttattggttaacattaatttcaagactatttcttgataaaat 6031732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 6127312 - 6127275
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  6127312 tttcttgataaaatctttcttgatatatagcattgctc 6127275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 17175965 - 17176014
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  || ||||||||||||||||||    
T  17175965 gagattttattggctaacattaatttcatgattatttcttgataaaatct 17176014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 17705409 - 17705458
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  ||| |||||||||||||||||    
T  17705409 gagattttattggctaacattaatttcaggacaatttcttgataaaatct 17705458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 23291112 - 23291149
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  23291112 tttcttgataaaatctttcttgatatatagcattgctc 23291149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 28675185 - 28675148
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  28675185 tttcttgataaaatctttcttgatatatagcattgctc 28675148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 33695355 - 33695392
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  33695355 tttcttgataaaatctttcttgatatatagcattgctc 33695392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 33696733 - 33696696
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  33696733 tttcttgataaaatctttcttgatatatagcattgctc 33696696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 6127394 - 6127347
Alignment:
Q  264 attttattggctaacatcaattt-cgagactatttcttgataaaatct 310  Q
    ||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  6127394 attttattggctaacattaattttcaagactatttcttgataaaatct 6127347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 299 - 334
Target Start/End: Original strand, 17176053 - 17176088
Alignment:
Q  299 ttgataaaatcttttttgatatatagcattgctcat 334  Q
    |||||||||||||| |||||||||||||||||||||    
T  17176053 ttgataaaatctttcttgatatatagcattgctcat 17176088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 308
Target Start/End: Complemental strand, 25987051 - 25987004
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||    
T  25987051 gagattttattggttaacattaatttcaggactatttcttgataaaat 25987004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 9752189 - 9752238
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  ||| ||||||| |||||||||    
T  9752189 gagattttattggctaacattaatttcaggacaatttcttaataaaatct 9752238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 332
Target Start/End: Original strand, 18365605 - 18365638
Alignment:
Q  299 ttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||| |||||||||||||||||||    
T  18365605 ttgataaaatctttcttgatatatagcattgctc 18365638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 332
Target Start/End: Original strand, 18370869 - 18370902
Alignment:
Q  299 ttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||| |||||||||||||||||||    
T  18370869 ttgataaaatctttcttgatatatagcattgctc 18370902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 23291028 - 23291077
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||   ||||||||||||||||||||    
T  23291028 gagattttattggttaacattaatttcagaactatttcttgataaaatct 23291077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 25986967 - 25986930
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  25986967 tttcttaataaaatctttcttgatatatagcattgctc 25986930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 28675269 - 28675220
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||| |||||||| ||||||  ||| |||||||||||||||||    
T  28675269 gagattttattagctaacattaatttcaggacaatttcttgataaaatct 28675220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 8515755 - 8515787
Alignment:
Q  297 tcttgataaaatcttttttgatatatagcattg 329  Q
    |||||||||||||||| ||||||||||||||||    
T  8515755 tcttgataaaatctttcttgatatatagcattg 8515787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 32702325 - 32702277
Alignment:
Q  262 agattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||| ||| || ||||||  |||||||||||||||||||||    
T  32702325 agattttattggttaatattaatttcaggactatttcttgataaaatct 32702277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 8145496 - 8145447
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  8145496 gagattttattggctaacattagtttcaagactatttcttgataaaatct 8145447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 11361075 - 11361124
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  11361075 gagattttattggctaacattaatttcaggactatttcttgataaaatct 11361124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 11361159 - 11361198
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcat 334  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  11361159 tttcttgataaaatctttcttgatatatagcattgctcat 11361198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 308
Target Start/End: Complemental strand, 14138789 - 14138742
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||    
T  14138789 gagattttattggctaacattaatttcaggactatttcttgataaaat 14138742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 37321737 - 37321784
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  37321737 gagattttattggctaacattaatttcaagactatttattgataaaat 37321784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 2477754 - 2477708
Alignment:
Q  264 attttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  2477754 attttattgactaacattaatttcaagactatttcttgataaaatct 2477708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 333
Target Start/End: Complemental strand, 12850838 - 12850800
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctca 333  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  12850838 tttcttgataaaatctttcttgatatatagcattgctca 12850800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 38899649 - 38899719
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||| ||    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  38899649 cccatgattttcggccagactgagattttattggttaacattaatttcaggactatttcttgataaaatct 38899719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 2477673 - 2477636
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  2477673 tttcttgataaaatctttcttgatatatagcattgctc 2477636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 3362815 - 3362778
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  3362815 tttcttgataaaatctttcttgatatatagcattgctc 3362778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 3362899 - 3362850
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  3362899 gagattttattggttaacattaatttcaggactatttcttgataaaatct 3362850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 4892323 - 4892274
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  4892323 gagattttattggttaacattaatttcaggactatttcttgataaaatct 4892274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 6043539 - 6043576
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  6043539 tttcttgataaaatctttcttgatatatagcattgctc 6043576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 12614677 - 12614726
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  ||| |||||||||||||||||    
T  12614677 gagattttattggctaacattaatttcaggacaatttcttgataaaatct 12614726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 12850922 - 12850873
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  12850922 gagattttattggttaacattaatttcaggactatttcttgataaaatct 12850873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 25398359 - 25398310
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  25398359 gagattttattggttaacattaatttcaggactatttcttgataaaatct 25398310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 31640884 - 31640933
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||||||||| ||||||  ||| |||||||||||||||||    
T  31640884 gagattttattggctaacattaatttcatgacaatttcttgataaaatct 31640933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 38899754 - 38899791
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||||||||||||    
T  38899754 tttcttgataaaatctttcttgatatatagcattgctc 38899791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 22913082 - 22913122
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcatt 335  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  22913082 tttcttgaaaaaatctttcttgatatatagcattgctcatt 22913122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 33584273 - 33584320
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaat 308  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||    
T  33584273 gagattttattggttaacattaatttcaggactatttcttgataaaat 33584320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 33584357 - 33584396
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcat 334  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  33584357 tttcttgaaaaaatctttcttgatatatagcattgctcat 33584396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 22912997 - 22913047
Alignment:
Q  260 agagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||||||||||| ||||||   || |||||||||||||||||    
T  22912997 agagattttattggctaacattaatttcagtacaatttcttgataaaatct 22913047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 4433951 - 4434000
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||   ||||||||||||||||||||    
T  4433951 gagattttattggttaacattaatttcagaactatttcttgataaaatct 4434000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 4892239 - 4892202
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  4892239 tttcttgaaaaaatctttcttgatatatagcattgctc 4892202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 12614761 - 12614798
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  12614761 tttcttgataaaatatttcttgatatatagcattgctc 12614798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 13664699 - 13664642
Alignment:
Q  275 taacatcaatttcgagactatttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||| |||||||  || ||||||||||||||||||| || ||||||| ||||||||    
T  13664699 taacattaatttcggaacaatttcttgataaaatctttcttaatatataacattgctc 13664642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 14138705 - 14138668
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  14138705 tttcttgataaaatctttcttgatatataacattgctc 14138668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 25398275 - 25398238
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  25398275 tttcttgaaaaaatctttcttgatatatagcattgctc 25398238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 3521951 - 3521999
Alignment:
Q  262 agattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||| |||||| ||||||   ||||||||||||||||||||    
T  3521951 agattttattggttaacattaatttcagaactatttcttgataaaatct 3521999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 3522034 - 3522074
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctcatt 335  Q
    |||||||| ||||||||| |||||||||| |||||||||||    
T  3522034 tttcttgaaaaaatctttcttgatatataacattgctcatt 3522074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 4538 - 4468
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||| ||    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  4538 cccatgattttcggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatct 4468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 4433 - 4396
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  4433 tttcttgaaaaaatctttcttgatatatagcattgctc 4396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 333
Target Start/End: Complemental strand, 11658 - 11620
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctca 333  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  11658 tttcttgataaaatctttcttgatatatagcattgctca 11620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 11763 - 11693
Alignment:
Q  240 cccatgattttcggtcaatgagagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    |||||||||||||| ||    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  11763 cccatgattttcggccaggctgagattttattggttaacattaatttcatgactatttcttgataaaatct 11693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 12963 - 12914
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  12963 gagattttattggttaacattaatttcaggactatttcttgataaaatct 12914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 12879 - 12842
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  12879 tttcttgaaaaaatctttcttgatatatagcattgctc 12842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 47971 - 47922
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  47971 gagattttattggttaacattaatttcaggactatttcttgataaaatct 47922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 47887 - 47850
Alignment:
Q  295 tttcttgataaaatcttttttgatatatagcattgctc 332  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  47887 tttcttgataaaatctttcttgataaatagcattgctc 47850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 30; Significance: 0.0000001; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 8523 - 8474
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||   ||||||||||||||||||||    
T  8523 gagattttattggttaacattaatttcagaactatttcttgataaaatct 8474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 16105 - 16056
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||   ||||||||||||||||||||    
T  16105 gagattttattggttaacattaatttcagaactatttcttgataaaatct 16056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 26057 - 26008
Alignment:
Q  261 gagattttattggctaacatcaatttcgagactatttcttgataaaatct 310  Q
    ||||||||||||| |||||| ||||||   ||||||||||||||||||||    
T  26057 gagattttattggttaacattaatttcagaactatttcttgataaaatct 26008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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