View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4046_high_19 (Length: 238)
Name: NF4046_high_19
Description: NF4046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4046_high_19 |
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| [»] scaffold0007 (1 HSPs) |
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Alignment Details
Target: scaffold0007 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 13 - 238
Target Start/End: Original strand, 149954 - 150179
Alignment:
| Q |
13 |
aaatctacctcaacaacaacctcaaacaacacctttagctgcttcttcatcagagacaacttcatcacaatctcatgatcattcaccaatgccttgtcaa |
112 |
Q |
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| T |
149954 |
aaatctacctcaacaacaacctcaaacaacacctttagctgcttcttcatcagagacaacttcatcacaatctcatgatcattcaccaatgccttgtcaa |
150053 |
T |
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| Q |
113 |
gaaggaaataggttacaagagttagaccaacaagttcatcaacaactaagaaaagggaaatatgtaagtcctgtttggaaacctaatgaaatgctatggt |
212 |
Q |
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| T |
150054 |
gaaggaaataggttacaagagttagaacaacaagttcatcaacaactaagaaaagggaaatatgtaagtcctgtttggaaacctaatgaaatgctatggt |
150153 |
T |
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| Q |
213 |
tagcaagagcatggaaagaacaatac |
238 |
Q |
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|||||||||||||||||||||||||| |
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| T |
150154 |
tagcaagagcatggaaagaacaatac |
150179 |
T |
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