View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4046_low_21 (Length: 241)

Name: NF4046_low_21
Description: NF4046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4046_low_21
NF4046_low_21
[»] chr3 (21 HSPs)
chr3 (1-120)||(25582314-25582432)
chr3 (7-117)||(25580892-25581001)
chr3 (7-121)||(40954754-40954867)
chr3 (7-121)||(34649984-34650099)
chr3 (7-120)||(34651275-34651387)
chr3 (1-120)||(32610921-32611040)
chr3 (1-120)||(51150067-51150185)
chr3 (7-121)||(11032496-11032610)
chr3 (7-121)||(49724706-49724820)
chr3 (7-121)||(49725878-49725992)
chr3 (7-121)||(52116989-52117103)
chr3 (7-121)||(52118155-52118269)
chr3 (7-121)||(52946475-52946589)
chr3 (7-121)||(52947679-52947793)
chr3 (7-120)||(11033656-11033768)
chr3 (7-121)||(1137500-1137614)
chr3 (1-121)||(1136342-1136463)
chr3 (9-121)||(43640898-43641009)
chr3 (18-120)||(49964799-49964908)
chr3 (67-120)||(32612247-32612301)
chr3 (1-54)||(32612300-32612353)
[»] chr4 (23 HSPs)
chr4 (1-121)||(678419-678538)
chr4 (7-121)||(2217044-2217157)
chr4 (7-121)||(50664313-50664427)
chr4 (1-121)||(23102193-23102314)
chr4 (7-121)||(2613740-2613854)
chr4 (7-121)||(2614913-2615027)
chr4 (7-121)||(16508034-16508148)
chr4 (7-121)||(23101047-23101162)
chr4 (7-121)||(50663104-50663218)
chr4 (7-121)||(55978584-55978698)
chr4 (7-121)||(56065042-56065156)
chr4 (7-121)||(52897606-52897719)
chr4 (7-121)||(52896415-52896529)
chr4 (7-120)||(56063757-56063870)
chr4 (18-121)||(677166-677269)
chr4 (18-121)||(3880958-3881061)
chr4 (7-96)||(16506978-16507066)
chr4 (57-117)||(12277177-12277236)
chr4 (67-120)||(37004233-37004286)
chr4 (62-120)||(42387677-42387735)
chr4 (7-54)||(2215894-2215941)
chr4 (67-121)||(2215940-2215995)
chr4 (20-54)||(51615887-51615921)
[»] chr1 (23 HSPs)
chr1 (7-121)||(42813688-42813801)
chr1 (7-121)||(4564044-4564157)
chr1 (7-121)||(14282889-14283002)
chr1 (1-121)||(38482359-38482479)
chr1 (7-121)||(16421951-16422065)
chr1 (1-116)||(38481021-38481135)
chr1 (7-121)||(11342078-11342191)
chr1 (7-121)||(11500097-11500210)
chr1 (7-121)||(41706897-41707010)
chr1 (7-121)||(42813338-42813451)
chr1 (7-121)||(14284085-14284199)
chr1 (1-121)||(46318862-46318982)
chr1 (7-121)||(4562865-4562979)
chr1 (7-121)||(41729747-41729861)
chr1 (7-120)||(51306184-51306297)
chr1 (21-121)||(46319036-46319136)
chr1 (7-121)||(51304846-51304961)
chr1 (7-121)||(16420226-16420344)
chr1 (58-121)||(11343267-11343331)
chr1 (67-121)||(41728957-41729012)
chr1 (72-121)||(16421850-16421900)
chr1 (58-121)||(11501286-11501351)
chr1 (7-54)||(41728911-41728958)
[»] chr5 (23 HSPs)
chr5 (7-121)||(43492661-43492774)
chr5 (1-121)||(1302681-1302801)
chr5 (1-121)||(38561034-38561154)
chr5 (7-121)||(38559680-38559794)
chr5 (7-120)||(1301334-1301447)
chr5 (7-121)||(17640462-17640575)
chr5 (18-116)||(26625160-26625257)
chr5 (7-121)||(23094630-23094744)
chr5 (7-120)||(19897501-19897614)
chr5 (7-120)||(34386352-34386465)
chr5 (9-121)||(17641631-17641741)
chr5 (18-120)||(34385095-34385196)
chr5 (8-121)||(26626463-26626574)
chr5 (7-120)||(34089845-34089956)
chr5 (7-121)||(23093319-23093433)
chr5 (7-120)||(34088683-34088796)
chr5 (1-121)||(19877558-19877665)
chr5 (8-121)||(639963-640070)
chr5 (67-121)||(19898710-19898765)
chr5 (7-54)||(19898764-19898811)
chr5 (84-117)||(33136505-33136538)
chr5 (187-223)||(640126-640162)
chr5 (180-223)||(19877455-19877499)
[»] chr2 (18 HSPs)
chr2 (18-120)||(43201313-43201414)
chr2 (7-121)||(36764862-36764976)
chr2 (18-120)||(42684209-42684311)
chr2 (18-115)||(10175604-10175701)
chr2 (7-121)||(39618136-39618251)
chr2 (67-120)||(36766009-36766062)
chr2 (31-115)||(39619170-39619255)
chr2 (1-54)||(45227317-45227370)
chr2 (59-119)||(45228679-45228737)
chr2 (58-121)||(32947683-32947747)
chr2 (20-121)||(36657524-36657622)
chr2 (22-121)||(17600599-17600697)
chr2 (18-73)||(32946768-32946822)
chr2 (187-222)||(36656521-36656556)
chr2 (5-56)||(39259193-39259244)
chr2 (180-222)||(36657434-36657476)
chr2 (180-220)||(39618296-39618336)
chr2 (67-118)||(45227369-45227421)
[»] chr8 (18 HSPs)
chr8 (1-121)||(27242883-27243003)
chr8 (1-121)||(27254458-27254578)
chr8 (1-121)||(27241703-27241822)
chr8 (1-121)||(27247576-27247695)
chr8 (1-121)||(14865074-14865194)
chr8 (1-121)||(14865999-14866119)
chr8 (1-121)||(12126835-12126955)
chr8 (7-121)||(11680279-11680393)
chr8 (7-121)||(11681459-11681573)
chr8 (18-121)||(32673567-32673669)
chr8 (7-121)||(35123345-35123459)
chr8 (7-121)||(12127972-12128086)
chr8 (7-120)||(35124518-35124631)
chr8 (1-121)||(32220692-32220813)
chr8 (7-117)||(32672399-32672509)
chr8 (7-120)||(767497-767610)
chr8 (1-86)||(32219640-32219725)
chr8 (180-223)||(12127875-12127918)
[»] chr7 (9 HSPs)
chr7 (7-121)||(35394603-35394717)
chr7 (7-121)||(31285579-31285693)
chr7 (7-121)||(31286757-31286871)
chr7 (7-118)||(35393272-35393383)
chr7 (7-121)||(34597785-34597899)
chr7 (7-120)||(29720981-29721088)
chr7 (67-121)||(34894350-34894404)
chr7 (7-121)||(34895405-34895518)
chr7 (27-112)||(35912628-35912713)
[»] chr6 (9 HSPs)
chr6 (7-121)||(4138807-4138921)
chr6 (7-121)||(10917968-10918082)
chr6 (1-121)||(1387483-1387604)
chr6 (7-121)||(10919162-10919277)
chr6 (7-121)||(1378563-1378677)
chr6 (7-121)||(1386311-1386425)
chr6 (7-120)||(4137764-4137877)
chr6 (18-121)||(6277115-6277217)
chr6 (18-121)||(6276100-6276202)


Alignment Details
Target: chr3 (Bit Score: 84; Significance: 5e-40; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 25582432 - 25582314
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatca 100  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| |||||||||||||||| |||    
T  25582432 caattaccccctccattaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactggcacatggtcagaaaagtcatgccacgtca 25582334  T
Q  101 tagggggtaattgactatat 120  Q
    ||||||||||||||||||||    
T  25582333 tagggggtaattgactatat 25582314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 117
Target Start/End: Original strand, 25580892 - 25581001
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggg 106  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| |||||||||||||||| |||||||||    
T  25580892 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcagaaaagtcatgccacgtcatagggg 25580990  T
Q  107 gtaattgacta 117  Q
    |||||||||||    
T  25580991 gtaattgacta 25581001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 40954754 - 40954867
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggg 106  Q
    |||||||| | ||||||| |||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| |||||||||    
T  40954754 ccccctccgttaatttccaccatccaacatgctgatgtggccgttaactgcc-acgtggcactggcacatggtcaaaaaagtcatgccacgtcatagggg 40954852  T
Q  107 gtaattgactatatt 121  Q
    |||||||||||||||    
T  40954853 gtaattgactatatt 40954867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 34649984 - 34650099
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata--gg 104  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| |||||||||||||||| |||||  ||    
T  34649984 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcagaaaagtcatgccacgtcatagggg 34650082  T
Q  105 gggtaattgactatatt 121  Q
    |||||||||||||||||    
T  34650083 gggtaattgactatatt 34650099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 120
Target Start/End: Complemental strand, 34651387 - 34651275
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggg 106  Q
    |||||||| | ||||| || ||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| |||||||||||||||| |||||||||    
T  34651387 ccccctccgttaattttcttcatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcagaaaagtcatgccacgtcatagggg 34651289  T
Q  107 gtaattgactatat 120  Q
    ||||||||||||||    
T  34651288 gtaattgactatat 34651275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 32610921 - 32611040
Alignment:
Q  1 caattaccc-cctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatc 99  Q
    ||||||||| ||||| | |||||||||||||||||| | ||| |||| ||||||| ||| |||||||||||||||||||| |||||||||||||||| ||    
T  32610921 caattaccctcctccgttaatttcctccatccaacaagctgatgtggtcgttaactgcc-acgtggcactgccacatggtcagaaaagtcatgccacgtc 32611019  T
Q  100 atagggggtaattgactatat 120  Q
    ||||||||||||||| |||||    
T  32611020 atagggggtaattgattatat 32611040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 51150067 - 51150185
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatca 100  Q
    |||||||||||||  | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| |||||||||||||||| |||    
T  51150067 caattaccccctcgtt-aatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcagaaaagtcatgccacgtca 51150164  T
Q  101 ta-gggggtaattgactatat 120  Q
    || ||||||||||||||||||    
T  51150165 taggggggtaattgactatat 51150185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 11032496 - 11032610
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  11032496 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaacagcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 11032594  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  11032595 ggtaattgactatatt 11032610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 49724706 - 49724820
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  49724706 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 49724804  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  49724805 ggtaattgactatatt 49724820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 49725992 - 49725878
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  49725992 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 49725894  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  49725893 ggtaattgactatatt 49725878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 52116989 - 52117103
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  52116989 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 52117087  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  52117088 ggtaattgactatatt 52117103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 52118269 - 52118155
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  52118269 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 52118171  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  52118170 ggtaattgactatatt 52118155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 52946475 - 52946589
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  52946475 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 52946573  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  52946574 ggtaattgactatatt 52946589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 52947793 - 52947679
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  52947793 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 52947695  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  52947694 ggtaattgactatatt 52947679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 120
Target Start/End: Complemental strand, 11033768 - 11033656
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggg 106  Q
    |||||||| | ||||||||||||||||| || ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||| ||| |||||||||    
T  11033768 ccccctccgttaatttcctccatccaacttgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgtcacgtcatagggg 11033670  T
Q  107 gtaattgactatat 120  Q
    ||||||||||||||    
T  11033669 gtaattgactatat 11033656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 1137614 - 1137500
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| | | |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  1137614 ccccctccgttaatttcctccatccaacatgctaatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 1137516  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  1137515 ggtaattgactatatt 1137500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 1136342 - 1136463
Alignment:
Q  1 caattaccc-cctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatc 99  Q
    ||||||||| ||||| | |||||||||||||||||||| ||| |||||||||||| ||| || |||||||| |||||||| | |||||||||||||| ||    
T  1136342 caattaccctcctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acatggcactgacacatggtcaaaaaagtcatgccacgtc 1136440  T
Q  100 ata-gggggtaattgactatatt 121  Q
    ||| |||||||||||||||||||    
T  1136441 ataggggggtaattgactatatt 1136463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 43640898 - 43641009
Alignment:
Q  9 ccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggggt 108  Q
    |||||| | |||||||||||||||||||| |||| | || |||||| ||| |||||||||| ||||||| | | |||||||||||||| ||| |||||||    
T  43640898 ccctccgttaatttcctccatccaacatgctgacattgctgttaacagcc-acgtggcactaccacatgatcaaaaaagtcatgccacgtcacagggggt 43640996  T
Q  109 aattgactatatt 121  Q
    |||||| ||||||    
T  43640997 aattgagtatatt 43641009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 49964799 - 49964908
Alignment:
Q  18 aatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccac------atggttagaaaagtcatgccacatcata--gggggta 109  Q
    |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||      ||||| ||||||||||||||||||||||  |||||||    
T  49964799 aatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactggcactgacacatggtcagaaaagtcatgccacatcatagggggggta 49964897  T
Q  110 attgactatat 120  Q
    |||||||||||    
T  49964898 attgactatat 49964908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 32612301 - 32612247
Alignment:
Q  67 actgccacatggttagaaaagtcatgccacatcatag-ggggtaattgactatat 120  Q
    ||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||    
T  32612301 actgccacatggtcagaaaagtcatgccacatcataggggggcaattgactatat 32612247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 32612353 - 32612300
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaac 54  Q
    ||||||| |||||||| |||||| ||||||||||||| ||| ||||||||||||    
T  32612353 caattactccctccattaatttcttccatccaacatgctgatgtggccgttaac 32612300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 7e-36; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 678538 - 678419
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatca 100  Q
    |||||||||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| |||||||||||||||  |||    
T  678538 caattaccccctccgttaatttcctccatccaacatgttgatgtggccgttaactgcc-acgtggcactgacacatggtcagaaaagtcatgccatgtca 678440  T
Q  101 tagggggtaattgactatatt 121  Q
    |||||||||||||||||||||    
T  678439 tagggggtaattgactatatt 678419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 2217157 - 2217044
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggg 106  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| |||||||||    
T  2217157 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 2217059  T
Q  107 gtaattgactatatt 121  Q
    |||||||||||||||    
T  2217058 gtaattgactatatt 2217044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 50664427 - 50664313
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| |||||||||||||||| ||||| |||    
T  50664427 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcagaaaagtcatgccacgtcatagggg 50664329  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  50664328 ggtaattgactatatt 50664313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 23102314 - 23102193
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatca 100  Q
    |||||||||||||| | ||| || ||||||||||||| ||| |||||||||||| |||||||||||||||||||||||  |||||| ||||||||| |||    
T  23102314 caattaccccctccgttaatatcttccatccaacatgctgatgtggccgttaactgcccacgtggcactgccacatggccagaaaaatcatgccacgtca 23102215  T
Q  101 ta-gggggtaattgactatatt 121  Q
     | |||||||||||||||||||    
T  23102214 gaggggggtaattgactatatt 23102193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 2613740 - 2613854
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  2613740 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 2613838  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  2613839 ggtaattgactatatt 2613854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 2615027 - 2614913
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  2615027 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 2614929  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  2614928 ggtaattgactatatt 2614913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 16508148 - 16508034
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  16508148 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 16508050  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  16508049 ggtaattgactatatt 16508034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 23101047 - 23101162
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | ||| |||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||  |||||| ||||||||| ||| | |||    
T  23101047 ccccctccgttaatatcctccatccaacatgctgatgtggccgttaactgcccacgtggcactgccacatggccagaaaaatcatgccacgtcagagggg 23101146  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  23101147 ggtaattgactatatt 23101162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 50663104 - 50663218
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||| | |||||||||||||||| ||||| |||    
T  50663104 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatgatcagaaaagtcatgccacgtcatagggg 50663202  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  50663203 ggtaattgactatatt 50663218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 55978584 - 55978698
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  55978584 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 55978682  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  55978683 ggtaattgactatatt 55978698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 56065156 - 56065042
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| |||||||||||||||| ||||| |||    
T  56065156 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcagaaaagtcatgccacgtcatagggg 56065058  T
Q  106 ggtaattgactatatt 121  Q
    ||||| ||||||||||    
T  56065057 ggtaactgactatatt 56065042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 52897719 - 52897606
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggg 106  Q
    |||||||| | |||||||||||||||||||| ||| ||||||||||||  || ||||||||||  |||||||| | |||||||||||||| |||||||||    
T  52897719 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactacc-acgtggcactaacacatggtcaaaaaagtcatgccacgtcatagggg 52897621  T
Q  107 gtaattgactatatt 121  Q
    |||||||||||||||    
T  52897620 gtaattgactatatt 52897606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 52896415 - 52896529
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| | ||||||||||||| |||||||| | |||||||||| ||| ||||| |||    
T  52896415 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactg-ccacgtggcactgacacatggtcaaaaaagtcatgtcacgtcatagggg 52896513  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  52896514 ggtaattgactatatt 52896529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 56063757 - 56063870
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | ||||| |||||||||||||| ||| || ||||||||| ||| ||||||||||| |||||||| |||||||||||||||| ||||| |||    
T  56063757 ccccctccgttaattttctccatccaacatgctgatgtagccgttaactgcc-acgtggcactgacacatggtcagaaaagtcatgccacgtcatagggg 56063855  T
Q  106 ggtaattgactatat 120  Q
    |||||||||||||||    
T  56063856 ggtaattgactatat 56063870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 677166 - 677269
Alignment:
Q  18 aatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagg-gggtaattgact 116  Q
    |||||||||||||||||||| ||| ||||| |||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||||    
T  677166 aatttcctccatccaacatgctgatgtggcggttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcataggagggtaattgact 677264  T
Q  117 atatt 121  Q
    |||||    
T  677265 atatt 677269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 3880958 - 3881061
Alignment:
Q  18 aatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-gggggtaattgact 116  Q
    |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||  |||||||| | |||||||||||||| ||||| ||||||||||||||    
T  3880958 aatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactaacacatggtcaaaaaagtcatgccacgtcataggggggtaattgact 3881056  T
Q  117 atatt 121  Q
    |||||    
T  3881057 atatt 3881061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 16506978 - 16507066
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccac 96  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| | ||||||||||||| |||||||| | ||||||||||||||    
T  16506978 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactg-ccacgtggcactgacacatggtcaaaaaagtcatgccac 16507066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 12277177 - 12277236
Alignment:
Q  57 cccacgtggcactgccacatggttagaaaagtcatgccacatcatagggggtaattgacta 117  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| | ||||||||||||    
T  12277177 cccacgtggcagtgccacatggtcagaaaagtcatgccacatcata-gcggtaattgacta 12277236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 37004286 - 37004233
Alignment:
Q  67 actgccacatggttagaaaagtcatgccacatcatagggggtaattgactatat 120  Q
    ||||||||||||| ||||| |||||||||| ||||||| |||||||||||||||    
T  37004286 actgccacatggtcagaaaggtcatgccacgtcataggaggtaattgactatat 37004233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 42387677 - 42387735
Alignment:
Q  62 gtggcactgccacatggttagaaaagtcatgccacatcatagggggtaattgactatat 120  Q
    ||||||||| ||| |||| |||||||| ||| ||| |||||||||||||||||||||||    
T  42387677 gtggcactgacacgtggtcagaaaagtgatgacacgtcatagggggtaattgactatat 42387735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 2215894 - 2215941
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaac 54  Q
    |||||||| | |||||||||||||||||||| ||| ||||||||||||    
T  2215894 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaac 2215941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 2215940 - 2215995
Alignment:
Q  67 actgccacatggttagaaaagtcatgccacatcata-gggggtaattgactatatt 121  Q
    ||||||||||||| | |||||||||||||| ||||| |||||| ||||||||||||    
T  2215940 actgccacatggtcaaaaaagtcatgccacgtcataggggggttattgactatatt 2215995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 51615887 - 51615921
Alignment:
Q  20 tttcctccatccaacatgatgacgtggccgttaac 54  Q
    |||||||||||||||||||||||||| ||||||||    
T  51615887 tttcctccatccaacatgatgacgtgaccgttaac 51615921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 42813801 - 42813688
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggg 106  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| |||||||||||||||| |||||||||    
T  42813801 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcagaaaagtcatgccacgtcatagggg 42813703  T
Q  107 gtaattgactatatt 121  Q
    |||||||||||||||    
T  42813702 gtaattgactatatt 42813688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 4564157 - 4564044
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggg 106  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  4564157 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtgacactgacacatggtcagaaaagtcatgccacatcatagggg 4564059  T
Q  107 gtaattgactatatt 121  Q
     ||||||||||||||    
T  4564058 ataattgactatatt 4564044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 14282889 - 14283002
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggg 106  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| |||||||||    
T  14282889 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 14282987  T
Q  107 gtaattgactatatt 121  Q
    |||||||||||||||    
T  14282988 gtaattgactatatt 14283002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 38482479 - 38482359
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatca 100  Q
    |||||||||||||| | |||||||||||||||||||| ||| ||||| |||||| ||| ||||||||||| |||||||| |||||||||||||||| |||    
T  38482479 caattaccccctccgttaatttcctccatccaacatgctgatgtggctgttaactgcc-acgtggcactgacacatggtcagaaaagtcatgccacgtca 38482381  T
Q  101 ta-gggggtaattgactatatt 121  Q
    || |||||||||||||||||||    
T  38482380 taggggggtaattgactatatt 38482359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 16422065 - 16421951
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||||||| | ||| |||    
T  16422065 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggttagaaaagtcatgccacgttatagggg 16421967  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  16421966 ggtaattgactatatt 16421951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 38481021 - 38481135
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatca 100  Q
    |||||| || |||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| |||||||||||||||| |||    
T  38481021 caattatcctctccgttaatttcctccatccaacatgttgatgtggccgttaactgcc-acgtggcactgacacatggtcagaaaagtcatgccacgtca 38481119  T
Q  101 tagggggtaattgact 116  Q
    ||||||||||||||||    
T  38481120 tagggggtaattgact 38481135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 11342078 - 11342191
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggg 106  Q
    |||||||| | |||||||| ||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| |||||||||    
T  11342078 ccccctccgttaatttccttcatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 11342176  T
Q  107 gtaattgactatatt 121  Q
    |||||||||||||||    
T  11342177 gtaattgactatatt 11342191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 11500097 - 11500210
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggg 106  Q
    |||||||| | |||||||| ||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| |||||||||    
T  11500097 ccccctccgttaatttccttcatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 11500195  T
Q  107 gtaattgactatatt 121  Q
    |||||||||||||||    
T  11500196 gtaattgactatatt 11500210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 41707010 - 41706897
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggg 106  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| |||||||||||| ||| ||||||||     
T  41707010 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcagaaaagtcatgtcacgtcatagggc 41706912  T
Q  107 gtaattgactatatt 121  Q
    |||||||||||||||    
T  41706911 gtaattgactatatt 41706897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 42813338 - 42813451
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggg 106  Q
    |||||||| | |||||||| ||||||||||| ||| |||||||||||| ||| ||||||||||| || ||||| |||||||||||||||| |||||||||    
T  42813338 ccccctccgttaatttccttcatccaacatgctgatgtggccgttaactgcc-acgtggcactgacaaatggtcagaaaagtcatgccacgtcatagggg 42813436  T
Q  107 gtaattgactatatt 121  Q
    |||||||||||||||    
T  42813437 gtaattgactatatt 42813451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 14284199 - 14284085
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  14284199 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 14284101  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  14284100 ggtaattgactatatt 14284085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 46318862 - 46318982
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatca 100  Q
    |||||||| ||||| | |||||||||||||||||||| ||| |||||||||||| | ||||||||| ||| |||||||| || ||||||||||||| |||    
T  46318862 caattacctcctccgttaatttcctccatccaacatgctgatgtggccgttaactg-ccacgtggcgctgacacatggtcaggaaagtcatgccacgtca 46318960  T
Q  101 ta-gggggtaattgactatatt 121  Q
    || |||||||||||||||||||    
T  46318961 taggggggtaattgactatatt 46318982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 4562865 - 4562979
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| | | ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  4562865 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgac-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 4562963  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  4562964 ggtaattgactatatt 4562979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 41729861 - 41729747
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | ||||||||||||||||||||  || |||||||||||| ||| ||||||||||| |||||||| |||||||||||| ||| ||||| |||    
T  41729861 ccccctccgttaatttcctccatccaacatgccgatgtggccgttaactgcc-acgtggcactggcacatggtcagaaaagtcatgtcacgtcatagggg 41729763  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  41729762 ggtaattgactatatt 41729747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 120
Target Start/End: Complemental strand, 51306297 - 51306184
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| |||||||||||||||  ||||| |||    
T  51306297 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtaagaaaagtcatgccaagtcatagggg 51306199  T
Q  106 ggtaattgactatat 120  Q
    |||| ||||||||||    
T  51306198 ggtagttgactatat 51306184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 46319136 - 46319036
Alignment:
Q  21 ttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-gggggtaattgactata 119  Q
    ||||||||||||||||| ||| |||||||||||| ||| ||||||| ||| |||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  46319136 ttcctccatccaacatgctgatgtggccgttaactgcc-acgtggctctgacacatggtcaaaaaagtcatgccacgtcataggggggtaattgactata 46319038  T
Q  120 tt 121  Q
    ||    
T  46319037 tt 46319036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 51304846 - 51304961
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata--gg 104  Q
    |||||||| | |||||||||||||||||||| ||| ||||| |||||| ||| | ||||||||| |||||||| |||||||||||| ||| |||||  ||    
T  51304846 ccccctccgttaatttcctccatccaacatgctgatgtggctgttaactgcc-atgtggcactgacacatggtcagaaaagtcatgtcacgtcatagggg 51304944  T
Q  105 gggtaattgactatatt 121  Q
    |||||||||||||||||    
T  51304945 gggtaattgactatatt 51304961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 16420226 - 16420344
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgcca----catcata 102  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| | |||||||||| || |||||||| |||||||||||||||    | |||||    
T  16420226 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactg-ccacgtggcattggcacatggtcagaaaagtcatgccacgtgcgtcata 16420324  T
Q  103 -gggggtaattgactatatt 121  Q
     |||||||||||||||||||    
T  16420325 ggggggtaattgactatatt 16420344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 121
Target Start/End: Complemental strand, 11343331 - 11343267
Alignment:
Q  58 ccacgtggcactgccacatggttagaaaagtcatgccacatcata-gggggtaattgactatatt 121  Q
    ||||||||||||| |||||||| | |||||||||||||| ||||| |||||||||||||||||||    
T  11343331 ccacgtggcactgacacatggtcaaaaaagtcatgccacgtcataggggggtaattgactatatt 11343267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 41728957 - 41729012
Alignment:
Q  67 actgccacatggttagaaaagtcatgccacatcata-gggggtaattgactatatt 121  Q
    ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  41728957 actgccacatggtcagaaaagtcatgccacgtcataggggggtaattgactatatt 41729012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 16421900 - 16421850
Alignment:
Q  72 cacatggttagaaaagtcatgccacatcata-gggggtaattgactatatt 121  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||||||||    
T  16421900 cacatggttagaaaagtcatgccacgttataggggggtaattgactatatt 16421850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 121
Target Start/End: Complemental strand, 11501351 - 11501286
Alignment:
Q  58 ccacgtggcactgccacatggttagaaaa-gtcatgccacatcata-gggggtaattgactatatt 121  Q
    ||||||||||||| |||||||| | |||| |||||||||| ||||| |||||||||||||||||||    
T  11501351 ccacgtggcactgacacatggtcaaaaaaagtcatgccacgtcataggggggtaattgactatatt 11501286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 41728911 - 41728958
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaac 54  Q
    |||||||| | |||||||||||||||||||| ||| ||||||||||||    
T  41728911 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaac 41728958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 43492774 - 43492661
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggg 106  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| |||  |||||||||  |||||||| ||||||||||||||||||||||||||    
T  43492774 ccccctccgttaatttcctccatccaacatgttgatgtggccgttaactgccg-cgtggcacttacacatggtcagaaaagtcatgccacatcatagggg 43492676  T
Q  107 gtaattgactatatt 121  Q
    |||||||||||||||    
T  43492675 gtaattgactatatt 43492661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 1302801 - 1302681
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatca 100  Q
    |||||||||||||| | |||||||||||||||||||| ||| ||||| |||||| ||| ||||||||||| |||||||| |||||||||||||||| |||    
T  1302801 caattaccccctccgttaatttcctccatccaacatgctgatgtggctgttaactgcc-acgtggcactgacacatggtcagaaaagtcatgccacgtca 1302703  T
Q  101 ta-gggggtaattgactatatt 121  Q
    || |||||||||||||||||||    
T  1302702 taggggggtaattgactatatt 1302681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 38561154 - 38561034
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatca 100  Q
    |||||||||||||| | |||||||||||||||||||| ||| ||||| |||||| ||| ||||||||||| |||||||| |||||||||||||||| |||    
T  38561154 caattaccccctccgttaatttcctccatccaacatgctgatgtggctgttaactgcc-acgtggcactgacacatggtcagaaaagtcatgccacgtca 38561056  T
Q  101 ta-gggggtaattgactatatt 121  Q
    || |||||||||||||||||||    
T  38561055 taggggggtaattgactatatt 38561034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 38559680 - 38559794
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagg-g 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| |||||||||||||||| ||||||| |    
T  38559680 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcagaaaagtcatgccacgtcataggag 38559778  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  38559779 ggtaattgactatatt 38559794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 1301334 - 1301447
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||| ||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| |||||||||||||||||||||| |||    
T  1301334 ccccctccgttaatttcatccatccaacatgctgatgtggccgttaacggcc-acgtggcactgacacatggtcagaaaagtcatgccacatcatagggg 1301432  T
Q  106 ggtaattgactatat 120  Q
    |||||||||||||||    
T  1301433 ggtaattgactatat 1301447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 17640462 - 17640575
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggg 106  Q
    |||||||| | |||||||| ||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| |||||||||    
T  17640462 ccccctccgttaatttccttcatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 17640560  T
Q  107 gtaattgactatatt 121  Q
    |||||||||||||||    
T  17640561 gtaattgactatatt 17640575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 26625160 - 26625257
Alignment:
Q  18 aatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggggtaattgact 116  Q
    |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||    
T  26625160 aatttcctccatccaacatgctgatgtggccgttaacagcc-acgtggcactgacacatggtcagaaaagtcatgccacgtcatagggggtaattgact 26625257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 23094744 - 23094630
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| ||||||||||||  || ||||||||||| |||||||| |||||||||||||||| ||||| |||    
T  23094744 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactacc-acgtggcactgacacatggtcagaaaagtcatgccacgtcatagggg 23094646  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  23094645 ggtaattgactatatt 23094630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 19897501 - 19897614
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  19897501 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 19897599  T
Q  106 ggtaattgactatat 120  Q
    |||||||||||||||    
T  19897600 ggtaattgactatat 19897614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 120
Target Start/End: Complemental strand, 34386465 - 34386352
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| | |||||||||||||||||| |||||| ||||||||| ||||| |||    
T  34386465 ccccctccgttaatttcctccatccaacatgttgatgtggccgttaactgcc-atgtggcactgccacatggtcagaaaaatcatgccacgtcatagggg 34386367  T
Q  106 ggtaattgactatat 120  Q
    |||||||||||||||    
T  34386366 ggtaattgactatat 34386352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 17641741 - 17641631
Alignment:
Q  9 ccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggggt 108  Q
    |||||| | |||||||||||||||||||| ||| |||||| ||||| ||| ||||||||||| |||||||| | |||||||||||||| |||||||||||    
T  17641741 ccctccgttaatttcctccatccaacatgctgatgtggccattaactgcc-acgtggcactgacacatggtca-aaaagtcatgccacgtcatagggggt 17641644  T
Q  109 aattgactatatt 121  Q
    |||||||||||||    
T  17641643 aattgactatatt 17641631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 34385095 - 34385196
Alignment:
Q  18 aatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggggtaattgacta 117  Q
    ||||||||| |||||||||| ||| |||||||||||| ||| | |||||||||||||||||| |||||||||||||||  |||||||| |||||||||||    
T  34385095 aatttcctctatccaacatgctgatgtggccgttaactgcc-atgtggcactgccacatggtcagaaaagtcatgccatgtcatagggtgtaattgacta 34385193  T
Q  118 tat 120  Q
    |||    
T  34385194 tat 34385196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 26626574 - 26626463
Alignment:
Q  8 cccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcataggggg 107  Q
    ||||||| | |||||||||||||||||||| ||| |||||||||||| | ||||||| || || ||||| ||||||||||||||||||| ||||| ||||    
T  26626574 cccctccgttaatttcctccatccaacatgctgatgtggccgttaactg-ccacgtgacaatgacacatagttagaaaagtcatgccacgtcata-gggg 26626477  T
Q  108 taattgactatatt 121  Q
    ||||||||||||||    
T  26626476 taattgactatatt 26626463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 120
Target Start/End: Complemental strand, 34089956 - 34089845
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggg 106  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| | ||||||||||||| |||||||| | |||||||||||||  ||||| |||    
T  34089956 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactg-ccacgtggcactgacacatggtcaaaaaagtcatgccatgtcata-ggg 34089859  T
Q  107 gtaattgactatat 120  Q
    ||||||||||||||    
T  34089858 gtaattgactatat 34089845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 23093319 - 23093433
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatag-gg 105  Q
    |||||||| | |||||||||||||||||||| ||| || || |||||| ||| ||||| ||||| |||||||| |||||||||||||||| |||||| ||    
T  23093319 ccccctccgttaatttcctccatccaacatgttgatgtagctgttaactgcc-acgtgacactgacacatggtcagaaaagtcatgccacgtcatagagg 23093417  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  23093418 ggtaattgactatatt 23093433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 34088683 - 34088796
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||| | ||| ||| ||||||||  || ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  34088683 ccccctccgttaatttcctccatccaacacgctgatgtgaccgttaactacc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 34088781  T
Q  106 ggtaattgactatat 120  Q
    |||||||||||||||    
T  34088782 ggtaattgactatat 34088796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 19877665 - 19877558
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatca 100  Q
    ||||||| |||||| |||||||||||||||||||||| |||| ||||||||||| ||||||             ||||| |||||||||||||||| |||    
T  19877665 caattactccctccgtcaatttcctccatccaacatgctgacatggccgttaactgcccac-------------atggtcagaaaagtcatgccacgtca 19877579  T
Q  101 tagggggtaattgactatatt 121  Q
    |||||||||||||||||||||    
T  19877578 tagggggtaattgactatatt 19877558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 639963 - 640070
Alignment:
Q  8 cccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcataggggg 107  Q
    ||||||| | ||||||||||||| |||||| ||| |||||||||||| ||| | | ||||||||      || |||||||||||| ||| ||||||||||    
T  639963 cccctccgttaatttcctccatcaaacatgctgatgtggccgttaactgcc-atgcggcactgca-----gtcagaaaagtcatgtcacgtcataggggg 640056  T
Q  108 taattgactatatt 121  Q
    ||||||||||||||    
T  640057 taattgactatatt 640070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 121
Target Start/End: Complemental strand, 19898765 - 19898710
Alignment:
Q  67 actgccacatggttagaaaagtcatgccacatcata-gggggtaattgactatatt 121  Q
    |||||||| |||| | |||||||||||||| ||||| |||||||||||||||||||    
T  19898765 actgccacgtggtcaaaaaagtcatgccacgtcataggggggtaattgactatatt 19898710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 19898811 - 19898764
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaac 54  Q
    |||||||| | |||||||||||||||||||| ||| ||||||||||||    
T  19898811 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaac 19898764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 117
Target Start/End: Complemental strand, 33136538 - 33136505
Alignment:
Q  84 aaagtcatgccacatcatagggggtaattgacta 117  Q
    ||||| ||||||||||||||||||||||||||||    
T  33136538 aaagttatgccacatcatagggggtaattgacta 33136505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 640126 - 640162
Alignment:
Q  187 ccactgaccttgcaaatatccccctgaaatttaacat 223  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  640126 ccactgaccttgcaaatacccctctgaaatttaacat 640162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 19877499 - 19877455
Alignment:
Q  180 gtgccatccactgaccttgcaaata-tccccctgaaatttaacat 223  Q
    |||||| ||||||||||||||||||  ||||||||||||||||||    
T  19877499 gtgccacccactgaccttgcaaataccccccctgaaatttaacat 19877455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 43201414 - 43201313
Alignment:
Q  18 aatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggggtaattgacta 117  Q
    |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||    
T  43201414 aatttcctccatccaacatgttgatgtggccgttaactgcc-acgtggcactgacacatggtcagaaaagtcatgccacgtcatagggggtaattgacta 43201316  T
Q  118 tat 120  Q
    |||    
T  43201315 tat 43201313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 36764862 - 36764976
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| | | |||||||||||  ||| ||||||||| |||||||||| |||||||||||||||| | ||| |||    
T  36764862 ccccctccgttaatttcctccatccaacatgctaatgtggccgttaattgcc-acgtggcaccgccacatggtcagaaaagtcatgccacgttatagggg 36764960  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  36764961 ggtaattgactatatt 36764976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 42684209 - 42684311
Alignment:
Q  18 aatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagg-gggtaattgact 116  Q
    |||||||||||||||||||| ||| |||||||||||| | ||| |||||||||||||||||| |||||||||||  ||| ||||||| ||||||||||||    
T  42684209 aatttcctccatccaacatgctgatgtggccgttaactg-ccatgtggcactgccacatggtcagaaaagtcatatcacgtcataggtgggtaattgact 42684307  T
Q  117 atat 120  Q
    ||||    
T  42684308 atat 42684311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 10175604 - 10175701
Alignment:
Q  18 aatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggggtaattgac 115  Q
    ||||||||||||| |||||| ||||||||| |||||  ||||| ||| ||||||||||||||||||||||||||||||| |||||  | |||||||||    
T  10175604 aatttcctccatctaacatgctgacgtggctgttaaatgcccatgtgacactgccacatggttagaaaagtcatgccacgtcataaagagtaattgac 10175701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 39618136 - 39618251
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggg 106  Q
    |||||||| | ||| || ||||||||||||| ||| |||||||||||| ||||||||||||||| |||||||  | |||| ||||||||| ||| |||||    
T  39618136 ccccctccgttaatatcttccatccaacatgctgatgtggccgttaactgcccacgtggcactgtcacatggccaaaaaaatcatgccacgtcagagggg 39618235  T
Q  107 g-taattgactatatt 121  Q
    | ||||||||||||||    
T  39618236 gataattgactatatt 39618251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 36766062 - 36766009
Alignment:
Q  67 actgccacatggttagaaaagtcatgccacatcatagggggtaattgactatat 120  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36766062 actgccacatggtcagaaaagtcatgccacatcatagggggtaattgactatat 36766009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 39619170 - 39619255
Alignment:
Q  31 caacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-gggggtaattgac 115  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||||||  |||||| ||||| ||| ||| | |||||||||||||    
T  39619170 caacatgttgatgtggccgttaactgcccacgtggcactgccacatggccagaaaaatcatgtcacgtcagaggggggtaattgac 39619255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45227317 - 45227370
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaac 54  Q
    |||||| ||||||| | |||||||||||||||||||||||| ||||| ||||||    
T  45227317 caattatcccctccgttaatttcctccatccaacatgatgatgtggctgttaac 45227370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 45228737 - 45228679
Alignment:
Q  59 cacgtggcactgccacatggttagaaaagtcatgccacatcatagggggtaattgactata 119  Q
    ||||||||||||||||||||| ||||||||||| |||| |  |||||| ||||||||||||    
T  45228737 cacgtggcactgccacatggtcagaaaagtcattccacgt--taggggctaattgactata 45228679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 121
Target Start/End: Complemental strand, 32947747 - 32947683
Alignment:
Q  58 ccacgtggcactgccacatggttagaaaagtcatgccacatcatag-ggggtaattgactatatt 121  Q
    |||||||||||||||||||| | | |||||||||||||| ||| || ||||||||||| ||||||    
T  32947747 ccacgtggcactgccacatgatcaaaaaagtcatgccacgtcacagaggggtaattgattatatt 32947683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 36657622 - 36657524
Alignment:
Q  20 tttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcataggggg-taattgactat 118  Q
    |||||||||||||||||| ||||  ||| |||||| ||| |||||||||||||||||| | | |||| |||||||   ||| |||||| |||||||||||    
T  36657622 tttcctccatccaacatgctgacagggctgttaactgcc-acgtggcactgccacatgataaaaaaaatcatgcc---tcacagggggataattgactat 36657527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 17600697 - 17600599
Alignment:
Q  22 tcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggggtaattgactatatt 121  Q
    |||||||||||||||| |||| |||  |||||| ||  ||||| || ||||||||| | | ||||||| |||||| ||| || |||||||||||||||||    
T  17600697 tcctccatccaacatggtgacatggttgttaactgct-acgtgacattgccacatgatcaaaaaagtcgtgccacgtcacagagggtaattgactatatt 17600599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 32946768 - 32946822
Alignment:
Q  18 aatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgcca 73  Q
    |||||||||||||||||||| |||| |||| |||||| | ||||||||||||||||    
T  32946768 aatttcctccatccaacatgctgacatggctgttaactg-ccacgtggcactgcca 32946822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 222
Target Start/End: Original strand, 36656521 - 36656556
Alignment:
Q  187 ccactgaccttgcaaatatccccctgaaatttaaca 222  Q
    ||||| ||||||||||||||||||||||||||||||    
T  36656521 ccactcaccttgcaaatatccccctgaaatttaaca 36656556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 39259244 - 39259193
Alignment:
Q  5 taccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccg 56  Q
    |||||||||| | |||||||||||||||||||| |||| ||| |||||||||    
T  39259244 taccccctccgttaatttcctccatccaacatgctgacatggtcgttaaccg 39259193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 36657476 - 36657434
Alignment:
Q  180 gtgccatccactgaccttgcaaatatccccctgaaatttaaca 222  Q
    |||||||||||| ||||||||||||  ||||||||||||||||    
T  36657476 gtgccatccactcaccttgcaaatactcccctgaaatttaaca 36657434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 39618296 - 39618336
Alignment:
Q  180 gtgccatccactgaccttgcaaatatccccctgaaatttaa 220  Q
    |||||||| | |||||||||||||| |||||||||||||||    
T  39618296 gtgccatctattgaccttgcaaatacccccctgaaatttaa 39618336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 45227369 - 45227421
Alignment:
Q  67 actgccacatggttagaaaagtcatgccacatcata-gggggtaattgactat 118  Q
    |||||||| |||| | |||||||||||||| ||||| ||||||||||||||||    
T  45227369 actgccacgtggtcataaaagtcatgccacgtcataggggggtaattgactat 45227421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 27243003 - 27242883
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatca 100  Q
    |||||||||||||| | |||||||||||||||||||| ||| |||||||||||| | ||||||||||||| |||||||||| |||||| ||||||| |||    
T  27243003 caattaccccctccgttaatttcctccatccaacatgctgatgtggccgttaactg-ccacgtggcactgacacatggttaaaaaagttatgccacgtca 27242905  T
Q  101 ta-gggggtaattgactatatt 121  Q
    || |||||||||||||||||||    
T  27242904 taggggggtaattgactatatt 27242883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 27254578 - 27254458
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatca 100  Q
    |||||||||||||| | |||||||||||||||||||| ||| |||||||||||| | ||||||||||||| |||||||||| |||||| ||||||| |||    
T  27254578 caattaccccctccgttaatttcctccatccaacatgctgatgtggccgttaactg-ccacgtggcactgacacatggttataaaagttatgccacgtca 27254480  T
Q  101 ta-gggggtaattgactatatt 121  Q
    || |||||||||||||||||||    
T  27254479 taggggggtaattgactatatt 27254458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 27241703 - 27241822
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatca 100  Q
    |||||| ||||||| | ||||| |||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| |||    
T  27241703 caattatcccctccgttaattttctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtaaaaaaagtcatgccacgtca 27241801  T
Q  101 tagggggtaattgactatatt 121  Q
    |||||||||||||||||||||    
T  27241802 tagggggtaattgactatatt 27241822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 27247576 - 27247695
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatca 100  Q
    |||||| ||||||| | ||||| |||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| |||    
T  27247576 caattatcccctccgttaattttctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtaaaaaaagtcatgccacgtca 27247674  T
Q  101 tagggggtaattgactatatt 121  Q
    |||||||||||||||||||||    
T  27247675 tagggggtaattgactatatt 27247695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 14865074 - 14865194
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatca 100  Q
    |||||||||||||| | |||||||||||||||||||| ||| |||||||||||| | ||||||||| ||| |||||||| | |||||||||||||| |||    
T  14865074 caattaccccctccgttaatttcctccatccaacatgctgatgtggccgttaactg-ccacgtggcgctgacacatggtcaaaaaagtcatgccacgtca 14865172  T
Q  101 ta-gggggtaattgactatatt 121  Q
    || |||||||||||||||||||    
T  14865173 taggggggtaattgactatatt 14865194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 14866119 - 14865999
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatca 100  Q
    |||||||||||||| | |||||||||||||||||||| ||| |||||||||||| | ||||||||| ||| |||||||| | |||||||||||||| |||    
T  14866119 caattaccccctccgttaatttcctccatccaacatgctgatgtggccgttaactg-ccacgtggcgctgacacatggtcaaaaaagtcatgccacgtca 14866021  T
Q  101 tag-ggggtaattgactatatt 121  Q
    ||| ||||||||||||||||||    
T  14866020 tagaggggtaattgactatatt 14865999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 12126835 - 12126955
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatca 100  Q
    |||||||||| ||| | ||| |||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||  |||||| ||||||||  |||    
T  12126835 caattaccccttccgttaatatcctccatccaacatgttgatgtggccgttaactgcccacgtggcactgccacatggccagaaaaatcatgccatgtca 12126934  T
Q  101 tagggggtaattgactatatt 121  Q
     |||| |||||||||||||||    
T  12126935 gagggcgtaattgactatatt 12126955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 11680279 - 11680393
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  11680279 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 11680377  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  11680378 ggtaattgactatatt 11680393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 11681573 - 11681459
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  11681573 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 11681475  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  11681474 ggtaattgactatatt 11681459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 32673669 - 32673567
Alignment:
Q  18 aatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggggtaattgacta 117  Q
    |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | ||||||||||||||  |||||||||||||||||||    
T  32673669 aatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgccatagggggtaattgacta 32673571  T
Q  118 tatt 121  Q
    ||||    
T  32673570 tatt 32673567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 35123345 - 35123459
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  35123345 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 35123443  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  35123444 ggtaattgactatatt 35123459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 12128086 - 12127972
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggg 106  Q
    |||||||| | ||| || ||||||||||||| ||| |||||||||||| |||||||||||||||||||||||  |||||| ||||||||| ||| |||||    
T  12128086 ccccctccgttaatatcttccatccaacatgctgatgtggccgttaactgcccacgtggcactgccacatggccagaaaaatcatgccacgtcagagggg 12127987  T
Q  107 gtaattgactatatt 121  Q
    |||||| ||||||||    
T  12127986 gtaattaactatatt 12127972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 120
Target Start/End: Complemental strand, 35124631 - 35124518
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  35124631 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 35124533  T
Q  106 ggtaattgactatat 120  Q
    |||||||||||||||    
T  35124532 ggtaattgactatat 35124518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 32220813 - 32220692
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatca 100  Q
    |||||||||||||  | ||| || ||||||||||||| ||| |||||||||||| |||||||||||||||||||||||  |||||| ||||||||| |||    
T  32220813 caattaccccctcggttaatatcatccatccaacatgttgatgtggccgttaactgcccacgtggcactgccacatggccagaaaaatcatgccacgtca 32220714  T
Q  101 ta-gggggtaattgactatatt 121  Q
     | |||||||||||||||||||    
T  32220713 gaggggggtaattgactatatt 32220692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 117
Target Start/End: Original strand, 32672399 - 32672509
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||| ||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  32672399 ccccctccgttaatttcatccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 32672497  T
Q  106 ggtaattgacta 117  Q
    ||||||||||||    
T  32672498 ggtaattgacta 32672509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 120
Target Start/End: Complemental strand, 767610 - 767497
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | ||||||||| |||||||||| ||| |||| ||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  767610 ccccctccgttaatttcctcaatccaacatgctgatgtggtcgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 767512  T
Q  106 ggtaattgactatat 120  Q
    |||||||||||||||    
T  767511 ggtaattgactatat 767497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 32219640 - 32219725
Alignment:
Q  1 caattaccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaa 86  Q
    |||||||||||| | | | | |||||||||||||||| ||| |||||||||||| | ||| ||||||||||| ||||| |||||||    
T  32219640 caattacccccttcgttagtatcctccatccaacatgctgatgtggccgttaactgtccatgtggcactgccgcatggctagaaaa 32219725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 12127918 - 12127875
Alignment:
Q  180 gtgccatccactgaccttgcaaatatccccctgaaatttaacat 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||    
T  12127918 gtgccatctattgaccttgcaaatatccccctgaaatttaacat 12127875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 35394717 - 35394603
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| |||||||||||||||| ||||| |||    
T  35394717 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcagaaaagtcatgccacgtcatagggg 35394619  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  35394618 ggtaattgactatatt 35394603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 31285579 - 31285693
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  31285579 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 31285677  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  31285678 ggtaattgactatatt 31285693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 31286871 - 31286757
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  31286871 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 31286773  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  31286772 ggtaattgactatatt 31286757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 35393272 - 35393383
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| ||||| |||||| ||| ||||||||||| |||||||| |||||||||||||||| ||||| |||    
T  35393272 ccccctccgttaatttcctccatccaacatgctgatgtggctgttaactgcc-acgtggcactgacacatggtaagaaaagtcatgccacgtcatagggg 35393370  T
Q  106 ggtaattgactat 118  Q
    |||||||||||||    
T  35393371 ggtaattgactat 35393383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 34597899 - 34597785
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggg 106  Q
    |||||||||| ||||| ||||||  ||||||| ||| |||  |||||| ||| ||||||||||||||||||||||||||| | |||| || |||||||||    
T  34597899 ccccctccattaattttctccatttaacatgaagacatggttgttaactgccaacgtggcactgccacatggttagaaaaatgatgcaacgtcatagggg 34597800  T
Q  107 gtaattgactatatt 121  Q
    |||||| || |||||    
T  34597799 gtaattaaccatatt 34597785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 120
Target Start/End: Complemental strand, 29721088 - 29720981
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||| ||| ||| ||||| |||||| ||| |||||||||      |||||||||||||||||||||| ||||| |||    
T  29721088 ccccctccgttaatttcctccatccaagatgctgatgtggctgttaactgcc-acgtggcac------atggttagaaaagtcatgccacgtcatagggg 29720996  T
Q  106 ggtaattgactatat 120  Q
    |||||||||||||||    
T  29720995 ggtaattgactatat 29720981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 34894350 - 34894404
Alignment:
Q  67 actgccacatggttagaaaagtcatgccacatcatagggggtaattgactatatt 121  Q
    ||||||||||| | | |||||||||||||| ||| ||||||||||||||||||||    
T  34894350 actgccacatgatcaaaaaagtcatgccacgtcacagggggtaattgactatatt 34894404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 34895518 - 34895405
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggg 106  Q
    |||||||| | |||||||||||| ||||||| |||| |||| |||||  ||| |||||||||||| | ||| | | |||||||||| ||| | | ||| |    
T  34895518 ccccctccgttaatttcctccattcaacatgctgacatggctgttaattgcc-acgtggcactgctatatgatcaaaaaagtcatgtcacgttacaggag 34895420  T
Q  107 gtaattgactatatt 121  Q
    |||||||||||||||    
T  34895419 gtaattgactatatt 34895405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 35912713 - 35912628
Alignment:
Q  27 catccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggggtaatt 112  Q
    ||||||||||| |||||||   |||||| | |||||||||||||||||||| | | |||||||||| ||| ||| |||| ||||||    
T  35912713 catccaacatgttgacgtgattgttaactgtccacgtggcactgccacatgatcaaaaaagtcatgtcacgtcaaagggagtaatt 35912628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 4e-28; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 4138921 - 4138807
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  4138921 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 4138823  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  4138822 ggtaattgactatatt 4138807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 10917968 - 10918082
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  10917968 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 10918066  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  10918067 ggtaattgactatatt 10918082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 1387604 - 1387483
Alignment:
Q  1 caattaccc-cctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatc 99  Q
    ||||||||| ||||| | |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||| | |||||||||||||| ||    
T  1387604 caattaccctcctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc-acgtggcactgacacatggtcaaaaaagtcatgccacgtc 1387506  T
Q  100 ata-gggggtaattgactatatt 121  Q
    ||| |||||||||||||||||||    
T  1387505 ataggggggtaattgactatatt 1387483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 10919277 - 10919162
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata--gg 104  Q
    |||||||| | |||||||||||||||||||| ||| |||| ||||||| ||| ||||||||||| |||||||||| |||||||||||||| |||||  ||    
T  10919277 ccccctccgttaatttcctccatccaacatgctgatgtggacgttaactgcc-acgtggcactgacacatggttaaaaaagtcatgccacgtcatagggg 10919179  T
Q  105 gggtaattgactatatt 121  Q
    |||||||||||||||||    
T  10919178 gggtaattgactatatt 10919162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 1378563 - 1378677
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| | | ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  1378563 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgtc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 1378661  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  1378662 ggtaattgactatatt 1378677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 1386311 - 1386425
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| | | ||||||||||| |||||||| | |||||||||||||| ||||| |||    
T  1386311 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgtc-acgtggcactgacacatggtcaaaaaagtcatgccacgtcatagggg 1386409  T
Q  106 ggtaattgactatatt 121  Q
    ||||||||||||||||    
T  1386410 ggtaattgactatatt 1386425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 4137764 - 4137877
Alignment:
Q  7 ccccctccatcaatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcata-ggg 105  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||||| | ||||||||||||| |||||||| | ||||  |||||||| ||||| |||    
T  4137764 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactg-ccacgtggcactgacacatggtcaaaaaaagcatgccacgtcatagggg 4137862  T
Q  106 ggtaattgactatat 120  Q
    |||||||||||||||    
T  4137863 ggtaattgactatat 4137877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 6277217 - 6277115
Alignment:
Q  18 aatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggggtaattgacta 117  Q
    ||||||||||||| |||||| |||| |||  |||||| ||| |||||||||||||||||| | | |||||||||||||| ||| ||||||||||||||||    
T  6277217 aatttcctccatctaacatgctgacatggttgttaactgcc-acgtggcactgccacatgatcaaaaaagtcatgccacgtcacagggggtaattgacta 6277119  T
Q  118 tatt 121  Q
    ||||    
T  6277118 tatt 6277115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 6276100 - 6276202
Alignment:
Q  18 aatttcctccatccaacatgatgacgtggccgttaaccgcccacgtggcactgccacatggttagaaaagtcatgccacatcatagggggtaattgacta 117  Q
    |||||||||||||||||||| |||| |||  |||||| ||| | |||||||||||||||| | | |||| ||||||||||||| ||||| ||||||||||    
T  6276100 aatttcctccatccaacatgttgacatggttgttaactgcc-atgtggcactgccacatgataaaaaaaatcatgccacatcacaggggataattgacta 6276198  T
Q  118 tatt 121  Q
    ||||    
T  6276199 tatt 6276202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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