View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4046_low_22 (Length: 241)
Name: NF4046_low_22
Description: NF4046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4046_low_22 |
 |  |
|
| [»] chr5 (22 HSPs) |
 |  |
|
| [»] chr1 (14 HSPs) |
 |  |
|
| [»] chr7 (29 HSPs) |
 |  |
|
| [»] chr4 (35 HSPs) |
 |  |
|
| [»] chr6 (25 HSPs) |
 |  |
|
| [»] chr8 (24 HSPs) |
 |  |
|
| [»] chr3 (35 HSPs) |
 |  |
|
| [»] scaffold0004 (1 HSPs) |
 |  |
|
| [»] chr2 (30 HSPs) |
 |  |
|
| [»] scaffold0256 (1 HSPs) |
 |  |
|
| [»] scaffold0209 (1 HSPs) |
 |  |
|
| [»] scaffold0131 (1 HSPs) |
 |  |
|
| [»] scaffold0006 (1 HSPs) |
 |  |
|
| [»] scaffold1764 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 164; Significance: 9e-88; HSPs: 22)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 22 - 241
Target Start/End: Complemental strand, 25562692 - 25562474
Alignment:
| Q |
22 |
tatcaccttctgaacttgtttctaatcatatcaatgtcttgcttgtgtcacaatttgataattcacccgttgacacatcacagttaggtattcaccatgt |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
25562692 |
tatcaccttctgaacttgtttctaatcatatcaatgtcttgcttgtgtcacaatttgattattcacccgttgacacatcacagttaggcattcaccatgt |
25562593 |
T |
 |
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagatt |
221 |
Q |
| |
|
||||| ||||||| ||| |||||||| |||| ||||||||||||||||||| |||| ||||||||||||||| ||||||||||| | |||| |||||||| |
|
|
| T |
25562592 |
tatcagatgaaaacgtgtgtagaaaataagg-ttagaaaccaacatacaaattaggatttatagaaatttcttttgggaacaaatattaggattgagatt |
25562494 |
T |
 |
| Q |
222 |
gttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
25562493 |
gttttgattcaccttgaaca |
25562474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 26406775 - 26406656
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagatt |
221 |
Q |
| |
|
||||||||||||| ||| |||||||||| |||||||||||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||| |
|
|
| T |
26406775 |
tatcatatgaaaatgtgtgtagaaaacagggtttagaaaccaacaaacaaactagggtttatagagaattctcttggcaacaaacactagggttgagatt |
26406676 |
T |
 |
| Q |
222 |
gttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
26406675 |
gttttgattcaccttgaaca |
26406656 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 25837987 - 25838106
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagatt |
221 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||||| |||||| | |||||| |||||||||| | ||||||||| |||||||||||||||||||||| |
|
|
| T |
25837987 |
tatcatatgaaaacgtgtgtagaaaacaaggtttagaagccaacaaagaaactatggtttatagagaattctcttggtaacaaacactagggttgagatt |
25838086 |
T |
 |
| Q |
222 |
gttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
25838087 |
gttttgattcaccttgaaca |
25838106 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 128 - 241
Target Start/End: Complemental strand, 17841546 - 17841432
Alignment:
| Q |
128 |
atgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgtttt |
226 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||| || || |||||||||||||||||||| |
|
|
| T |
17841546 |
atgataaagtgcgtagaaaacagggtttagaaaccatcatacaaactagggtttatagagaatttctcttggcaaacaatactagggttgagattgtttt |
17841447 |
T |
 |
| Q |
227 |
gattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
17841446 |
gattcaccttgaaca |
17841432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 40222642 - 40222762
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| |
|
|
| T |
40222642 |
tatcagatgataaagtgtgtagaaaaacaaggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttgaga |
40222740 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
40222741 |
ttgttttgattcaccttgaaca |
40222762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 31782738 - 31782640
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
31782738 |
aaaacagggtttagaagccaacatacaaactagggtttatagataatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaaca |
31782640 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 22672713 - 22672833
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| || |
|
|
| T |
22672713 |
tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttggga |
22672811 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
22672812 |
ttgttttgattcaccttgaaca |
22672833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 25445381 - 25445491
Alignment:
| Q |
132 |
aaaagtgcgtaga-aaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||| ||||||||| |||||||||||| |
|
|
| T |
25445381 |
aaaagtgtgtagataaacaaggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aactctagggttgggattgttttgat |
25445479 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
25445480 |
tcaccttgaaca |
25445491 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 2298305 - 2298184
Alignment:
| Q |
122 |
tatcatatga-aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgag |
218 |
Q |
| |
|
|||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| ||| ||||||||| | |
|
|
| T |
2298305 |
tatcatatgataaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaatctctcttggcaac-aactctagggttggg |
2298207 |
T |
 |
| Q |
219 |
attgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
2298206 |
attgttttgattcaccttgaaca |
2298184 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 16093575 - 16093475
Alignment:
| Q |
140 |
gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga |
238 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
16093575 |
gtagaaaacagggtttagaagccaacatacaaactagggtttatagataatttctcttggcaacaaacactagggttgggatctttttgattcaccttga |
16093476 |
T |
 |
| Q |
239 |
a |
239 |
Q |
| |
|
| |
|
|
| T |
16093475 |
a |
16093475 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 25452384 - 25452494
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||| |||| |||| |||||||||||| |
|
|
| T |
25452384 |
aaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aactctagcgttgggattgttttgat |
25452482 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
25452483 |
tcaccttgaaca |
25452494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 35385755 - 35385635
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| ||| |||||||||| |||||||||||||||||||||||| |||||||||||| ||| ||| ||||||||| || |
|
|
| T |
35385755 |
tatcaaatgataaagtgtgtagaaaaacaaagtttagaaactaacatacaaactagggtttatagagaatttctcttggcaac-aactctagggttggga |
35385657 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
35385656 |
ttgttttgattcaccttgaaca |
35385635 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 11962717 - 11962616
Alignment:
| Q |
140 |
gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga |
238 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||||| |||| ||||| |||||||||||| ||||| ||||||||||||||||||||||||||||| ||| |
|
|
| T |
11962717 |
gtagaaaacagggtttagaagccaacatacaaactatggttcatagagaatttctcttggcaacaa-cactagggttgagattgttttgattcaccatga |
11962619 |
T |
 |
| Q |
239 |
aca |
241 |
Q |
| |
|
||| |
|
|
| T |
11962618 |
aca |
11962616 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 1240307 - 1240427
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || ||||||||| |||||||||||||||||||||||||| | |||||||| | ||| ||||||||||||| || |
|
|
| T |
1240307 |
tatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagatattttctctttgcaac-aacactagggttggga |
1240405 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
1240406 |
ttgttttgattcaccttgaaca |
1240427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 10627260 - 10627363
Alignment:
| Q |
140 |
gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattg-ttttgattcaccttg |
237 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||| ||||||||| |||||||||| | |||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
10627260 |
gtagaaaacagggtttagaagccaacatacaaactagtgtttatagagaatttctcttagcaacaaacactagggttaggattgtttttgattcaccttg |
10627359 |
T |
 |
| Q |
238 |
aaca |
241 |
Q |
| |
|
|||| |
|
|
| T |
10627360 |
aaca |
10627363 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 237
Target Start/End: Original strand, 42238188 - 42238298
Alignment:
| Q |
128 |
atgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttt |
225 |
Q |
| |
|
|||| |||||| |||||||| || ||||||||| |||||||||||||||||||||||||| |||||||||| | ||| ||||||||||||| |||||||| |
|
|
| T |
42238188 |
atgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctctttgcaac-aacactagggttgggattgttt |
42238286 |
T |
 |
| Q |
226 |
tgattcaccttg |
237 |
Q |
| |
|
|||||||||||| |
|
|
| T |
42238287 |
tgattcaccttg |
42238298 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 1170702 - 1170810
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
1170702 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
1170798 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
1170799 |
tcaccttgaaca |
1170810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 35314703 - 35314779
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagat |
220 |
Q |
| |
|
|||||| ||||||||||| || ||||||||| |||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
35314703 |
aaaacagggtttagaaacaaaacaacaaactagagtttataggggtttctcttggcaacaaacactagggttgagat |
35314779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 222
Target Start/End: Original strand, 4754166 - 4754237
Alignment:
| Q |
151 |
ggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
|||||| || |||||| | | |||||||||| |||| || ||||||| ||||||||||||||||||||||| |
|
|
| T |
4754166 |
ggtttaaaagccaacacaaacactagggtttgtagagtttgctcttggcaacaaacactagggttgagattg |
4754237 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 241
Target Start/End: Original strand, 28786291 - 28786403
Alignment:
| Q |
128 |
atgaaaaagtgcgtagaaaacaagg-tttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttt |
225 |
Q |
| |
|
||||||| |||||||||||| ||| ||||||| |||||||||||| |||||| ||| | || |||||||| ||||| ||||||||||| ||||||| |
|
|
| T |
28786291 |
atgaaaaggtgcgtagaaaaacaggatttagaaggcaacatacaaacaagggtt-ataaagaacttctcttgc-aacaa-cactagggttggaattgttt |
28786387 |
T |
 |
| Q |
226 |
tgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
28786388 |
tgattcaccttgaaca |
28786403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 29748349 - 29748423
Alignment:
| Q |
142 |
agaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggtt |
215 |
Q |
| |
|
||||||||||| ||||||| |||||| |||||||||||| |||| | ||||||||| |||||||| ||||||| |
|
|
| T |
29748349 |
agaaaacaagggtttagaagccaacaagaaaactagggtttgtagagaattctcttggcaacaaacagtagggtt |
29748423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 4897792 - 4897824
Alignment:
| Q |
209 |
tagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |
|
|
| T |
4897792 |
tagggttgagattgttttcattcaccttgaaca |
4897824 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 14)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 3091409 - 3091289
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat |
220 |
Q |
| |
|
||||| ||||| | ||| |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |
|
|
| T |
3091409 |
tatcagatgaatatgtgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggtaacaaacactagggttgagat |
3091310 |
T |
 |
| Q |
221 |
tgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
3091309 |
tgttttgattcaccttgaaca |
3091289 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 4144967 - 4144866
Alignment:
| Q |
140 |
gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga |
238 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
4144967 |
gtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaa-aaacactagggttgagattgttttgattcaccttga |
4144869 |
T |
 |
| Q |
239 |
aca |
241 |
Q |
| |
|
||| |
|
|
| T |
4144868 |
aca |
4144866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 9526345 - 9526465
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||| ||||||||| || |
|
|
| T |
9526345 |
tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aactctagggttggga |
9526443 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
9526444 |
ttgttttgattcaccttgaaca |
9526465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 21353649 - 21353529
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || ||||||||| |||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| || |
|
|
| T |
21353649 |
tatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggtaac-aacactagggttggga |
21353551 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
21353550 |
ttgttttgattcaccttgaaca |
21353529 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 25133951 - 25134070
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat |
220 |
Q |
| |
|
||||| |||| ||| || |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||| ||||||| ||||| ||| |
|
|
| T |
25133951 |
tatcagatgataaaatgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaac-aacactatggttgtgat |
25134049 |
T |
 |
| Q |
221 |
tgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
25134050 |
tgttttgattcaccttgaaca |
25134070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 14996929 - 14997039
Alignment:
| Q |
131 |
aaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgatt |
230 |
Q |
| |
|
|||||||| |||||||||| ||||||||| |||||| ||||||||||||||||| | | ||||||||| || |||||||||||||| ||||||||| ||| |
|
|
| T |
14996929 |
aaaaagtgtgtagaaaacagggtttagaagccaacaaacaaactagggtttataaagaattctcttggtaataaacactagggttgggattgtttttatt |
14997028 |
T |
 |
| Q |
231 |
caccttgaaca |
241 |
Q |
| |
|
||||||||||| |
|
|
| T |
14997029 |
caccttgaaca |
14997039 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 2393584 - 2393465
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat |
220 |
Q |
| |
|
||||| |||||||| | |||||||||||||||||||| ||||||| ||||||| |||||||||| |||||||||||| || ||||||||||||| ||| |
|
|
| T |
2393584 |
tatcagatgaaaaacagagtagaaaacaaggtttagaagccaacatgcaaactaaggtttatagagaatttctcttggcaa-taacactagggttgggat |
2393486 |
T |
 |
| Q |
221 |
tgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
2393485 |
tgttttgattcaccttgaaca |
2393465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 9521604 - 9521714
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||| |||||||||||| |
|
|
| T |
9521604 |
aaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaatttctcttggtaacattt-ctagggttgggattgttttgat |
9521702 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
9521703 |
tcaccttgaaca |
9521714 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 46783052 - 46783142
Alignment:
| Q |
151 |
ggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||| | || |||| | ||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
46783052 |
ggtttagaagccaacaaacaaactatggtttatagagaattatctttgcaacaaacactagggttgagatcgttttgattcaccttgaaca |
46783142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 2232488 - 2232596
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | |||||||| |||||||||||| |
|
|
| T |
2232488 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctttagggttgggattgttttgat |
2232584 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
2232585 |
tcaccttgaaca |
2232596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 2401468 - 2401404
Alignment:
| Q |
177 |
ggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
2401468 |
ggtttatagagaatttctcttggcaacaa-cactagggttgagattgttttgattcaccttgaaca |
2401404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 14352964 - 14353038
Alignment:
| Q |
148 |
caaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
||||| |||||| |||||| |||||||||||| |||| ||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
14352964 |
caaggattagaagccaacaacaaaactagggtttgtagagatttctcttggcaacaaacactaggtttgagattg |
14353038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 13785531 - 13785483
Alignment:
| Q |
171 |
aactagggtttatagaaatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||||||||| |||| ||||||||||| ||||||||||||| |||||| |
|
|
| T |
13785531 |
aactagggtttgtagagatttctcttggcaacaaacactaggattgaga |
13785483 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 236
Target Start/End: Complemental strand, 20566947 - 20566857
Alignment:
| Q |
143 |
gaaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcacctt |
236 |
Q |
| |
|
||||||| ||||||||| | |||| |||||||| |||| ||||| ||||||||| ||||||||||||||| |||| |||||||||||||| |
|
|
| T |
20566947 |
gaaaacagggtttagaagcaaaca-acaaactaaggttaataga--tttctcttgacgacaaacactagggttaggattattttgattcacctt |
20566857 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 81; Significance: 3e-38; HSPs: 29)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 25351233 - 25351352
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat |
220 |
Q |
| |
|
||||| |||| |||||| |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||| |
|
|
| T |
25351233 |
tatcagatgataaagtgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttgagat |
25351331 |
T |
 |
| Q |
221 |
tgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
25351332 |
tgttttgattcaccttgaaca |
25351352 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 25356927 - 25357046
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat |
220 |
Q |
| |
|
||||| |||| |||||| |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||| |
|
|
| T |
25356927 |
tatcagatgataaagtgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttgagat |
25357025 |
T |
 |
| Q |
221 |
tgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
25357026 |
tgttttgattcaccttgaaca |
25357046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 44016946 - 44016844
Alignment:
| Q |
140 |
gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga |
238 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
44016946 |
gtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttga |
44016847 |
T |
 |
| Q |
239 |
aca |
241 |
Q |
| |
|
||| |
|
|
| T |
44016846 |
aca |
44016844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 25410010 - 25410129
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat |
220 |
Q |
| |
|
||||| |||| |||||| |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||| |
|
|
| T |
25410010 |
tatcagatgataaagtgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttgggat |
25410108 |
T |
 |
| Q |
221 |
tgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
25410109 |
tgttttgattcaccttgaaca |
25410129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 21369539 - 21369641
Alignment:
| Q |
140 |
gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga |
238 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||||||||||||| || ||||||||| |||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
21369539 |
gtagaaaacagggtttagaagccaacatacaaactagggtttatagagaaattctcttggcaacaaacattagggttgagattgttttgattcaccttga |
21369638 |
T |
 |
| Q |
239 |
aca |
241 |
Q |
| |
|
||| |
|
|
| T |
21369639 |
aca |
21369641 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 34547166 - 34547046
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| || |
|
|
| T |
34547166 |
tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttggga |
34547068 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
34547067 |
ttgttttgattcaccttgaaca |
34547046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 8378797 - 8378687
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||| ||||||||| |||||||||||| |
|
|
| T |
8378797 |
aaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aactctagggttgggattgttttgat |
8378699 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
8378698 |
tcaccttgaaca |
8378687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 133 - 241
Target Start/End: Complemental strand, 44144157 - 44144049
Alignment:
| Q |
133 |
aaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattc |
231 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| ||| |||||||||||| |||||||||||||| |
|
|
| T |
44144157 |
aaagtgtgtagaaaacaaggtttagaagccaacatacaaactagggtttatagagaatttttcttggcaac-aacactagggttatgattgttttgattc |
44144059 |
T |
 |
| Q |
232 |
accttgaaca |
241 |
Q |
| |
|
|||||||||| |
|
|
| T |
44144058 |
accttgaaca |
44144049 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 6067503 - 6067383
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagatt |
221 |
Q |
| |
|
||||| ||||||| ||| | |||||||| ||||||||| |||||| ||||||||||||||||||| | ||||||||| ||||||||||||||||| |||| |
|
|
| T |
6067503 |
tatcagatgaaaacgtgtgaagaaaacatggtttagaagccaacaaacaaactagggtttatagagaattctcttggtaacaaacactagggttgggatt |
6067404 |
T |
 |
| Q |
222 |
g-ttttgattcaccttgaaca |
241 |
Q |
| |
|
| ||||||||||||||||||| |
|
|
| T |
6067403 |
gtttttgattcaccttgaaca |
6067383 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 44011035 - 44010933
Alignment:
| Q |
140 |
gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga |
238 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||||| |||||||||| ||||| |||||| ||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
44011035 |
gtagaaaacagggtttagaagccaacatacaaactatggtttatagagaatttttcttggcaacaaacactagggttgggattgttttgatccaccttga |
44010936 |
T |
 |
| Q |
239 |
aca |
241 |
Q |
| |
|
||| |
|
|
| T |
44010935 |
aca |
44010933 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 241
Target Start/End: Complemental strand, 7464815 - 7464701
Alignment:
| Q |
128 |
atgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttt |
225 |
Q |
| |
|
|||| |||||| |||||||| || |||||| || |||||||||||||||||||||||||| |||||||||||| ||| |||||||||||| |||||||| |
|
|
| T |
7464815 |
atgataaagtgtgtagaaaaacagggtttaaaagccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggtttggattgttt |
7464717 |
T |
 |
| Q |
226 |
tgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
7464716 |
tgattcaccttgaaca |
7464701 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 128 - 241
Target Start/End: Complemental strand, 44512822 - 44512708
Alignment:
| Q |
128 |
atgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacacta-gggttgagattgttt |
225 |
Q |
| |
|
|||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| | || |||| | ||| ||||||| |||||| |||||||| |
|
|
| T |
44512822 |
atgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaattttctttgcaac-aacactaggggttgggattgttt |
44512724 |
T |
 |
| Q |
226 |
tgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
44512723 |
tgattcaccttgaaca |
44512708 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 42006565 - 42006662
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttatagaaa-tttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||| ||||||||| |||||| |||||||| |||||||||||| |||||||||| || || ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
42006565 |
aaaacagggtttagaagccaacaaacaaactatggtttatagaaaatttctcttggcaagaa-cactagggttgggattgttttgattcaccttgaaca |
42006662 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 1099697 - 1099617
Alignment:
| Q |
161 |
ccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
1099697 |
ccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgaaattgttttgattcacgttgaaca |
1099617 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 7069671 - 7069779
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
7069671 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
7069767 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
7069768 |
tcaccttgaaca |
7069779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 7074678 - 7074786
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
7074678 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
7074774 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
7074775 |
tcaccttgaaca |
7074786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 15541286 - 15541178
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
15541286 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
15541190 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
15541189 |
tcaccttgaaca |
15541178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 25405284 - 25405392
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
25405284 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
25405380 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
25405381 |
tcaccttgaaca |
25405392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 2120800 - 2120894
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgtt-ttgattcaccttg |
237 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||| | |||||||||| ||| ||| ||||||||| ||||||| ||||||||||||| |
|
|
| T |
2120800 |
aaaacaaggtttagaagccaacatacaaactagggtttatagagattttctcttggcaac-aactctagggttgggattgttgttgattcaccttg |
2120894 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 30246872 - 30246969
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||| ||||||||| |||||| ||||||||||||||||| |||||||||||| ||||| ||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
30246872 |
aaaacagggtttagaagccaacaacaaaactagggtttatagagaatttctcttggcaacaa-cactacggttgggattgttttgattcaccttgaaca |
30246969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 3320341 - 3320233
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| ||||| ||||||||||||||||||| ||| ||| |||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
3320341 |
aaaagtgtgtagaaaaacaaggtttagat--caacaaacaaactagggtttatagagaatctctattggcaacaa-ctctagggttgggattgttttgat |
3320245 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
3320244 |
tcaccttgaaca |
3320233 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 3325089 - 3324981
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| ||||| ||||||||||||||||||| ||| ||| |||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
3325089 |
aaaagtgtgtagaaaaacaaggtttagat--caacaaacaaactagggtttatagagaatctctattggcaacaa-ctctagggttgggattgttttgat |
3324993 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
3324992 |
tcaccttgaaca |
3324981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 11081520 - 11081600
Alignment:
| Q |
143 |
gaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
|||||||||| ||||||| |||||| |||||||||||| |||| | ||||||||| ||||||||||||||||||||||| |
|
|
| T |
11081520 |
gaaaacaagggtttagaagccaacaacaaaactagggtttgtagagaattctcttggcaacaaacactagggttgagattg |
11081600 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 11084417 - 11084469
Alignment:
| Q |
170 |
aaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
|||||||||||| |||||| ||||||||| |||||||| |||||||||||||| |
|
|
| T |
11084417 |
aaactagggtttgtagaaaattctcttggcaacaaacaatagggttgagattg |
11084469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 45366544 - 45366619
Alignment:
| Q |
145 |
aaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagatt |
221 |
Q |
| |
|
||||||||||||||| ||||| ||||||||| ||||||||| ||||| |||| ||||||||||||||||| |||| |
|
|
| T |
45366544 |
aaacaaggtttagaagtcaaca-acaaactagagtttatagagttttcttttggcaacaaacactagggttgtgatt |
45366619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 1099754 - 1099717
Alignment:
| Q |
204 |
aacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
1099754 |
aacactagggttgagattgttttgattcacgttgaaca |
1099717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 6048882 - 6048963
Alignment:
| Q |
142 |
agaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
||||||||||| ||||||| ||||||| |||||||||||| || | | ||||||||| ||||||||||||| ||| ||||| |
|
|
| T |
6048882 |
agaaaacaagggtttagaagccaacatcaaaactagggtttgtaaagaattctcttggcaacaaacactaggtttgggattg |
6048963 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 6332263 - 6332313
Alignment:
| Q |
172 |
actagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
||||||||||||||| || ||||||| ||||||||||||| ||||||||| |
|
|
| T |
6332263 |
actagggtttatagagtttactcttggcaacaaacactaggattgagattg |
6332313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 13290725 - 13290681
Alignment:
| Q |
168 |
acaaactagggtttatagaaatttctcttgggaacaaacactagg |
212 |
Q |
| |
|
|||||||||||||| |||| |||||||||| ||||||||||||| |
|
|
| T |
13290725 |
acaaactagggtttgtagagttttctcttggcaacaaacactagg |
13290681 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 35)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 16489229 - 16489348
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat |
220 |
Q |
| |
|
||||| |||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||| ||||||||| |
|
|
| T |
16489229 |
tatcagatgataaagtgtgtagaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactaaggttgagat |
16489327 |
T |
 |
| Q |
221 |
tgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
16489328 |
tgttttgattcaccttgaaca |
16489348 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 16638706 - 16638826
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat |
220 |
Q |
| |
|
||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||| | ||||||||||||||||| ||| |
|
|
| T |
16638706 |
tatcagatgaaaaagtgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctctttgcaacaaacactagggttgggat |
16638805 |
T |
 |
| Q |
221 |
tgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||| |||| |
|
|
| T |
16638806 |
tgttttgattcaccttaaaca |
16638826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 25699629 - 25699748
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat |
220 |
Q |
| |
|
|||||||||| |||||| |||||||||| |||||| || |||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||| |
|
|
| T |
25699629 |
tatcatatgataaagtgtgtagaaaacagggtttaaaagccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttgggat |
25699727 |
T |
 |
| Q |
221 |
tgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
25699728 |
tgttttgattcaccttgaaca |
25699748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 15312218 - 15312315
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
15312218 |
aaaacaaggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttgggattgttttgattcaccttgaaca |
15312315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 47566390 - 47566492
Alignment:
| Q |
140 |
gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga |
238 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
47566390 |
gtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttatcttggcaacaaacactagggttgagattgttttgattcacattga |
47566489 |
T |
 |
| Q |
239 |
aca |
241 |
Q |
| |
|
||| |
|
|
| T |
47566490 |
aca |
47566492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 13072265 - 13072164
Alignment:
| Q |
140 |
gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga |
238 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||| | ||||||||||| ||||||||||||||||||||| |
|
|
| T |
13072265 |
gtagaaaacaaggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaac-atcactagggttgggattgttttgattcaccttga |
13072167 |
T |
 |
| Q |
239 |
aca |
241 |
Q |
| |
|
||| |
|
|
| T |
13072166 |
aca |
13072164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 36769380 - 36769478
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
36769380 |
aaaacaaggtttagaagccaacatacaaactagggtttgaagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaaca |
36769478 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 36771293 - 36771395
Alignment:
| Q |
140 |
gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga |
238 |
Q |
| |
|
|||||||| | ||||||||| ||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36771293 |
gtagaaaatagggtttagaagccaacatacaaactagggtttgaagagaatttctcttggcaacaaacactagggttgagattgttttgattcaccttga |
36771392 |
T |
 |
| Q |
239 |
aca |
241 |
Q |
| |
|
||| |
|
|
| T |
36771393 |
aca |
36771395 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 15831020 - 15831140
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttatag-aaatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||||||||| || |
|
|
| T |
15831020 |
tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagaaaatttttcttggcaac-aacactagggttggga |
15831118 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
15831119 |
ttgttttgattcaccttgaaca |
15831140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 18586845 - 18586965
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaagg-tttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| || |
|
|
| T |
18586845 |
tatcagatgataaagtgtgtagaaaaatagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttggga |
18586943 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
18586944 |
ttgttttgattcaccttgaaca |
18586965 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 31300303 - 31300423
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
|||||||||| |||||| |||||||| || ||||||||||||||||| |||||||||||||||||| |||||||||| | ||| ||||||||||||| || |
|
|
| T |
31300303 |
tatcatatgataaagtgtgtagaaaaacagggtttagaaaccaacattcaaactagggtttatagagaatttctctttgcaac-aacactagggttggga |
31300401 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
31300402 |
ttgttttgattcaccttgaaca |
31300423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 4569974 - 4570093
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat |
220 |
Q |
| |
|
||||| |||| |||||| |||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||| ||| | ||||||||||| ||| |
|
|
| T |
4569974 |
tatcagatgataaagtgtgtagaaaacagagtttagaagccaacatacaaactagggtttatagagaatttctcttggcaac-atcactagggttgggat |
4570072 |
T |
 |
| Q |
221 |
tgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
4570073 |
tgttttgattcaccttgaaca |
4570093 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 4556362 - 4556242
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||| ||| ||||||||||||| || |
|
|
| T |
4556362 |
tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacttacaaactagggtttatagagaatttctcttggcaac-aacactagggttggga |
4556264 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||| ||||||||||||||| |
|
|
| T |
4556263 |
ttgtttcgattcaccttgaaca |
4556242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 8529176 - 8529266
Alignment:
| Q |
151 |
ggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||| ||| | ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
8529176 |
ggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-accactagggttgggattgttttgattcaccttgaaca |
8529266 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 144 - 239
Target Start/End: Complemental strand, 32274181 - 32274087
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaa |
239 |
Q |
| |
|
|||||||||||||||| |||||| ||||||||| ||||||||| |||||| |||| |||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
32274181 |
aaaacaaggtttagaagccaaca-acaaactagagtttatagagatttctattggcaacaaacactagagttgagattgttttgattcaccttgaa |
32274087 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 4558208 - 4558310
Alignment:
| Q |
140 |
gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga |
238 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||| || | | |||||||| ||||||| |
|
|
| T |
4558208 |
gtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggctgggttgtttttgatttaccttga |
4558307 |
T |
 |
| Q |
239 |
aca |
241 |
Q |
| |
|
||| |
|
|
| T |
4558308 |
aca |
4558310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 15316860 - 15316957
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |||||||||||| | | |||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
15316860 |
aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcagc-aacactagggttcggattgttttgatttaccttgaaca |
15316957 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 25614191 - 25614103
Alignment:
| Q |
153 |
tttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||| ||||||||||| ||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
25614191 |
tttagaagccaacatacaa-ctatggtttatagagaatttctcttggtaacaaacactagggttgagattgttttgattcacattgaaca |
25614103 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 26557664 - 26557737
Alignment:
| Q |
168 |
acaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
26557664 |
acaaactagggtttatagagatttctcttggcaacaaacactagggttgggattgttttgattcaccttaaaca |
26557737 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 4884753 - 4884873
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || ||||||||| |||||||||||| ||||||||||||| |||||||||| | ||| |||||| ||| || || |
|
|
| T |
4884753 |
tatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaattagggtttatagagaatttctctttgcaac-aacactgggggtggga |
4884851 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
4884852 |
ttgttttgattcaccttgaaca |
4884873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 16689243 - 16689123
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || ||||||||||||||||| |||||||||||||||||| |||||||||| | ||| ||| ||||| ||| | |
|
|
| T |
16689243 |
tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacattcaaactagggtttatagataatttctctttgcaac-aactctaggtttggaa |
16689145 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
16689144 |
ttgttttgattcaccttgaaca |
16689123 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 11853440 - 11853548
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| | ||||||||||||||||| ||| |||||||| ||||| | |||||||||||||||||||||| |
|
|
| T |
11853440 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaataaactagggtttatagagaatctctcttggcaacaa-ctctagggttgagattgttttgat |
11853536 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
11853537 |
tcaccttgaaca |
11853548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 3982450 - 3982365
Alignment:
| Q |
151 |
ggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttg |
237 |
Q |
| |
|
|||| |||||| |||| ||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
3982450 |
ggttcagaaacaaaca-acaaactagggttcatagtgatttctcttggcaacaaacactagggttgagattgtttttattcaccttg |
3982365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 55822169 - 55822264
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||| |||||| ||||| ||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||||||||||||||| |
|
|
| T |
55822169 |
aaaacaaggtttaga--ccaacaaacaaattagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaaca |
55822264 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 4874759 - 4874665
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttga |
238 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||| |||| ||| | |||||| | |||||||||||| |||| | ||||||||||||||||||| |
|
|
| T |
4874759 |
aaaacaaggtttagaagccaacaaacaaactaggatttaaagagaattctctagacaacaaacactagagttgggtttgttttgattcaccttga |
4874665 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 7050511 - 7050440
Alignment:
| Q |
170 |
aaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||| ||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
7050511 |
aaactagggtttatagagaatttctcttggcaacaa-cactaaggttgtgattgttttgattcaccttgaaca |
7050440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 10112925 - 10113005
Alignment:
| Q |
143 |
gaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
|||||||||| ||||||| |||||| | |||||||||||| |||| || ||||||| ||||||||||||||||||||||| |
|
|
| T |
10112925 |
gaaaacaagggtttagaagccaacacaaaaactagggtttgtagagtttgctcttggcaacaaacactagggttgagattg |
10113005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 38208961 - 38208880
Alignment:
| Q |
142 |
agaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
||||||||||| ||||||| ||||||| | |||| |||| |||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
38208961 |
agaaaacaagggtttagaagccaacatcatatctagcgtttgtagaaaattctcttggcaacaaacactagggttgagattg |
38208880 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 16186108 - 16186019
Alignment:
| Q |
151 |
ggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| ||| |||||||| | | |||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
16186108 |
ggtttagaaacaaaca-acaaactagggtttagagagatttctctaagcgggagacactaaggttgggattgttttgattcaccttgaaca |
16186019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 5337035 - 5336967
Alignment:
| Q |
173 |
ctagggtttatagaaatttctcttgggaacaaacactag--ggttgagattgttttgattcaccttgaa |
239 |
Q |
| |
|
|||||||||||||| | |||| |||| ||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
5337035 |
ctagggtttatagagaattctattggcaacaaacactatatggttgagattgttttgactcaccttgaa |
5336967 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 9022359 - 9022440
Alignment:
| Q |
142 |
agaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
||||||||||| ||||||| |||||| |||||||||||| |||| | ||||||||| ||||||||||| ||||| ||||| |
|
|
| T |
9022359 |
agaaaacaagggtttagaagtcaacatcaaaactagggtttgtagagaattctcttggcaacaaacactatggttgggattg |
9022440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 23001660 - 23001582
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaac-atacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
||||||||| |||||| ||||| ||| ||||||||||||||||| |||||| ||| ||||| ||||||| ||||||||| |
|
|
| T |
23001660 |
aaaacaaggattagaagccaaccata-aaactagggtttatagagatttcttttgacaacaatcactaggattgagattg |
23001582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 5516531 - 5516453
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
||||||| | |||||| |||||| ||| |||||||| |||| |||||| |||| ||||||||||||||||| ||||| |
|
|
| T |
5516531 |
aaaacaaagcttagaatccaacaacaaaaatagggtttgtagagatttcttttggcaacaaacactagggttgggattg |
5516453 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 52043660 - 52043579
Alignment:
| Q |
142 |
agaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
||||||||||| ||||||| ||||||| |||||| ||||| |||| ||||||||| | ||||||||||||||| ||||| |
|
|
| T |
52043660 |
agaaaacaagggtttagaagccaacatcaaaactaaggtttgtagagttttctcttgtcagcaaacactagggttgggattg |
52043579 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 47151169 - 47151090
Alignment:
| Q |
143 |
gaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
|||||||||| ||||||| |||||| | |||||| |||||||||| || ||||||| ||| |||||||||||||| |||| |
|
|
| T |
47151169 |
gaaaacaagggtttagaagccaacaca-aaactaaggtttatagagtttgctcttggtaaccaacactagggttgaaattg |
47151090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 79; Significance: 5e-37; HSPs: 25)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 19702147 - 19702045
Alignment:
| Q |
140 |
gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga |
238 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
19702147 |
gtagaaaacaaggtttagaagccaacatacaaactagcgtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttga |
19702048 |
T |
 |
| Q |
239 |
aca |
241 |
Q |
| |
|
||| |
|
|
| T |
19702047 |
aca |
19702045 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 17695154 - 17695034
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||| || |
|
|
| T |
17695154 |
tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaaa-actagggttggga |
17695056 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
17695055 |
ttgttttgattcaccttgaaca |
17695034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 25466202 - 25466082
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||| |||||||| |
|
|
| T |
25466202 |
tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactaaggttgaga |
25466104 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
25466103 |
ttgttttgattcaccttgaaca |
25466082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 22343104 - 22342984
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
|||||||||| |||||| |||||||| || ||||||||| |||||||||||||||||||||||||| ||| |||||||| ||| |||||||||||||||| |
|
|
| T |
22343104 |
tatcatatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaatctctcttggcaac-aacactagggttgaga |
22343006 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||| |||||||| |
|
|
| T |
22343005 |
ttgttttgattcaacttgaaca |
22342984 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 3577817 - 3577697
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || |||||| ||||||||||||||||||||||||||||| |||||||||| | ||| ||||||||||||| || |
|
|
| T |
3577817 |
tatcagatgataaagtgtgtagaaaaacagggtttaaaaaccaacatacaaactagggtttatagagaatttctctttgcaac-aacactagggttggga |
3577719 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
3577718 |
ttgttttgattcaccttgaaca |
3577697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 22352155 - 22352035
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || ||||||||| |||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| || |
|
|
| T |
22352155 |
tatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttggga |
22352057 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||| |||||||||||| |
|
|
| T |
22352056 |
ttgttttgaatcaccttgaaca |
22352035 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 13467766 - 13467646
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || ||||||||| |||||||||||||||||||||||||| ||||| |||| | ||| ||||||||||||| || |
|
|
| T |
13467766 |
tatcaaatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaatttatctttgcaac-aacactagggttggga |
13467668 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
13467667 |
ttgttttgattcaccttgaaca |
13467646 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 26643075 - 26643175
Alignment:
| Q |
141 |
tagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaa |
239 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||||| |||||||||||||||||| ||| |
|
|
| T |
26643075 |
tagaaaacaaggtttagaagccaacatacaaactagggtttatagagaatttctcttgcccac-aacactagggttgggattgttttgattcacctcgaa |
26643173 |
T |
 |
| Q |
240 |
ca |
241 |
Q |
| |
|
|| |
|
|
| T |
26643174 |
ca |
26643175 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 26749041 - 26749141
Alignment:
| Q |
141 |
tagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaa |
239 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||||| |||||||||||||||||| ||| |
|
|
| T |
26749041 |
tagaaaacaaggtttagaagccaacatacaaactagggtttatagagaatttctcttgcccac-aacactagggttgggattgttttgattcacctcgaa |
26749139 |
T |
 |
| Q |
240 |
ca |
241 |
Q |
| |
|
|| |
|
|
| T |
26749140 |
ca |
26749141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 239
Target Start/End: Complemental strand, 24542953 - 24542859
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaa |
239 |
Q |
| |
|
|||| ||||||||||| |||||| ||||||| |||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
24542953 |
aaaataaggtttagaagccaacac-caaactatggtttatagagatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaa |
24542859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 17035974 - 17036054
Alignment:
| Q |
161 |
ccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
17035974 |
ccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaaca |
17036054 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 25941524 - 25941643
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || ||||||||||||||||| |||||||||||| ||||| |||||||||||| ||||| | ||||||||| || |
|
|
| T |
25941524 |
tatcagatgataaagtgtgtagaaaaacatggtttagaaaccaacattcaaactagggtt-atagagaatttctcttggtaacaa-ctctagggttggga |
25941621 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
25941622 |
ttgttttgattcaccttgaaca |
25941643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 239
Target Start/End: Original strand, 33215712 - 33215824
Alignment:
| Q |
128 |
atgaaaaagtgcgtagaaaacaag-gtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttt |
225 |
Q |
| |
|
|||| |||||| |||||||| || |||||||| |||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||| |||||||| |
|
|
| T |
33215712 |
atgataaagtgtgtagaaaaacagagtttagaagccaacatacaaactagggtttatagagaatttctctttgcaacaa-cactagggttgtgattgttt |
33215810 |
T |
 |
| Q |
226 |
tgattcaccttgaa |
239 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
33215811 |
tgattcaccttgaa |
33215824 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 13878618 - 13878726
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
13878618 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
13878714 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
13878715 |
tcaccttgaaca |
13878726 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 13883366 - 13883474
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
13883366 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
13883462 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
13883463 |
tcaccttgaaca |
13883474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 16785810 - 16785918
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
16785810 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
16785906 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
16785907 |
tcaccttgaaca |
16785918 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 31249005 - 31248897
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
31249005 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
31248909 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
31248908 |
tcaccttgaaca |
31248897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 35201617 - 35201509
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
35201617 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
35201521 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
35201520 |
tcaccttgaaca |
35201509 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 26887502 - 26887407
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||||||||||||||| |
|
|
| T |
26887502 |
aaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaaca |
26887407 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 12166397 - 12166329
Alignment:
| Q |
174 |
tagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
12166397 |
tagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacgttgaaca |
12166329 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 22858231 - 22858150
Alignment:
| Q |
142 |
agaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
||||||||||| ||||||| | |||| | |||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
22858231 |
agaaaacaagggtttagaagctaacacaaaaactagggtttgtagaattttctcttggtaacaaacactagggttgagattg |
22858150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 30445552 - 30445633
Alignment:
| Q |
142 |
agaaaacaa-ggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
||||||||| ||||||||| ||||||| |||||||||||| |||| | ||||||||| ||||||||||| ||||||||||| |
|
|
| T |
30445552 |
agaaaacaatggtttagaagccaacattaaaactagggtttgtagataattctcttggcaacaaacactacggttgagattg |
30445633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 5166099 - 5165999
Alignment:
| Q |
140 |
gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga |
238 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||| |||||||||||||| |||||||| || || || |||||||||| || ||||||||||||| |||| |
|
|
| T |
5166099 |
gtagaaaacagggtttagaagccaacatacaagctagggtttatagagaatttctcaaggcaa-gaatactagggttggga-tgttttgattcactttga |
5166002 |
T |
 |
| Q |
239 |
aca |
241 |
Q |
| |
|
||| |
|
|
| T |
5166001 |
aca |
5165999 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 7293862 - 7293935
Alignment:
| Q |
168 |
acaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||| |||||||||||| |
|
|
| T |
7293862 |
acaaactagggttcatagagatttctcttggtaagaaacactagggttggtattgttttcgctcaccttgaaca |
7293935 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 20526855 - 20526924
Alignment:
| Q |
153 |
tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
|||||||||||||| | ||||||||| || |||| || |||||| ||||||||||||||||||||||| |
|
|
| T |
20526855 |
tttagaaaccaacacaaaaactaggggttgtagagtttgctcttgacaacaaacactagggttgagattg |
20526924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 77; Significance: 7e-36; HSPs: 24)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 2267326 - 2267206
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat |
220 |
Q |
| |
|
||||| ||||| | ||| |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| |
|
|
| T |
2267326 |
tatcagatgaatatgtgtgtagaaaacatggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactacggttgagat |
2267227 |
T |
 |
| Q |
221 |
tgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||| ||||||| |
|
|
| T |
2267226 |
tgttttgattcacgttgaaca |
2267206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 28895404 - 28895501
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
28895404 |
aaaacaaggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aactctagggttgagattgttttgattcaccttgaaca |
28895501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 30423109 - 30423211
Alignment:
| Q |
140 |
gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga |
238 |
Q |
| |
|
|||||||||| ||||||||| |||||| ||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
30423109 |
gtagaaaacagggtttagaagccaacaaacaaactagggtttatagagaatttctcttggcaacaaacactagggctgagattgttttgattcaccttga |
30423208 |
T |
 |
| Q |
239 |
aca |
241 |
Q |
| |
|
||| |
|
|
| T |
30423209 |
aca |
30423211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 33032552 - 33032653
Alignment:
| Q |
140 |
gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga |
238 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
33032552 |
gtagaaaacatggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttgagattgttttgattcaccttga |
33032650 |
T |
 |
| Q |
239 |
aca |
241 |
Q |
| |
|
||| |
|
|
| T |
33032651 |
aca |
33032653 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 590696 - 590793
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
590696 |
aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacacttgggttgggattgttttgattcaccttgaaca |
590793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 23179841 - 23179744
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
23179841 |
aaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttgggattgttttgattcaccttgaaca |
23179744 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 26268510 - 26268413
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||||||||||| |||||||||||| ||| |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
26268510 |
aaaacaaggtttagaagcctacatacaaactagggtttatagagaatttctcttggcaac-aacactagagttgagattgttttgattcaccttgaaca |
26268413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 9021410 - 9021290
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||| | ||| |||||||||||| || |
|
|
| T |
9021410 |
tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctctttgcaac-aacactagggttcgga |
9021312 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
9021311 |
ttgttttgattcaccttgaaca |
9021290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 21033749 - 21033869
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || ||||||||| |||||||||||||||||||||||||| |||||||||||| ||| ||||||||| ||| || |
|
|
| T |
21033749 |
tatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagataatttctcttggcaac-aacactaggcttggga |
21033847 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
21033848 |
ttgttttgattcaccttgaaca |
21033869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 29555088 - 29554968
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || ||||||||||||| ||||||||||||||||| |||| |||||||||||| ||||| ||||||||||| || |
|
|
| T |
29555088 |
tatcagatgataaagtgtgtagaaaaacagggtttagaaaccatcatacaaactagggtttttagagaatttctcttggcaacaa-cactagggttggga |
29554990 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
29554989 |
ttgttttgattcaccttgaaca |
29554968 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 17799708 - 17799607
Alignment:
| Q |
140 |
gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga |
238 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||||||| |||||||| ||||| ||| || ||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
17799708 |
gtagaaaacagggtttagaagccaacatacaaactaggatttatagagaatttgtctaggcaac-aacactagggttgggattgttttgattcaccttga |
17799610 |
T |
 |
| Q |
239 |
aca |
241 |
Q |
| |
|
||| |
|
|
| T |
17799609 |
aca |
17799607 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 144 - 240
Target Start/End: Original strand, 17847581 - 17847676
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaac |
240 |
Q |
| |
|
||||||||||||||||| |||| |||||||| |||||||||| |||||||| || ||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
17847581 |
aaaacaaggtttagaaatgaaca-acaaactaaggtttatagagatttctctaggcaacaaacactatggttgggattgttttgattcaccttgaac |
17847676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 28327799 - 28327907
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
28327799 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
28327895 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
28327896 |
tcaccttgaaca |
28327907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 16752800 - 16752705
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||||||||||||||| |
|
|
| T |
16752800 |
aaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaaca |
16752705 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 4812778 - 4812670
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||| ||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
4812778 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggttcatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
4812682 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4812681 |
tcaccttgaaca |
4812670 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 25684534 - 25684642
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||| | ||||| | ||||||||| |||||||||||| |
|
|
| T |
25684534 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttagcaacaa-ctctagggttgggattgttttgat |
25684630 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
25684631 |
tcaccttgaaca |
25684642 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 16757545 - 16757450
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||||| ||| ||||||| ||||| | ||||||||| |||||||||||||||||||||||| |
|
|
| T |
16757545 |
aaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttgacaacaa-ctctagggttgggattgttttgattcaccttgaaca |
16757450 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 15944775 - 15944869
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttga |
238 |
Q |
| |
|
|||||| ||||||||| | |||| ||||| ||||||||||||| | |||||||| |||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
15944775 |
aaaacagggtttagaagctaacaaacaaattagggtttatagagaaatctcttggcaacaaacactagggttctgattgctttgattcaccttga |
15944869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 15949436 - 15949533
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||| |||||| || |||||| ||||||||||||||| ||| | ||||||| ||||||||||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
15949436 |
aaaacagggtttaaaagccaacacacaaactagggtttacagagaattctctttacaacaaacactaggtttgtgattgtttggattcaccttgaaca |
15949533 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 28332522 - 28332630
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||| | ||||||||||||||||| | ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
28332522 |
aaaagtgtgtagaaaaacaaggtttaga--ccaataaacaaactagggtttataaagaatctctcttggtaacaa-ctctagggttgggattgttttgat |
28332618 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
28332619 |
tcaccttgaaca |
28332630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 241
Target Start/End: Original strand, 3276229 - 3276343
Alignment:
| Q |
128 |
atgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttt |
225 |
Q |
| |
|
|||| |||||| |||||||| || ||||||||| |||||| | ||||||||||||||||| ||||| |||| | ||| ||| | ||||||| |||||||| |
|
|
| T |
3276229 |
atgataaagtgtgtagaaaaacagggtttagaagccaacacaaaaactagggtttatagagaatttttctttgcaac-aactccagggttgggattgttt |
3276327 |
T |
 |
| Q |
226 |
tgattcaccttgaaca |
241 |
Q |
| |
|
||||| |||||||||| |
|
|
| T |
3276328 |
tgatttaccttgaaca |
3276343 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 241
Target Start/End: Complemental strand, 33021170 - 33021080
Alignment:
| Q |
152 |
gtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaaca---ctagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||| |||| |||||||||| |||||| | ||||||||| | |||||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
33021170 |
gtttagaaacaaaca-acaaactagg-tttatatagatttctcttagcaacaaacaacactaggattgagattgttttgattcaccttgaaca |
33021080 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 28228416 - 28228513
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||| ||||||||| ||||| | |||||| |||||||||| | |||| |||| ||||||||||| |||| | |||| | |||||||||||||| |
|
|
| T |
28228416 |
aaaacatggtttagaaggcaacaaataaactaaggtttatagagaattcttttggcaacaaacactatggttagaactgttgttattcaccttgaaca |
28228513 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 31573995 - 31573922
Alignment:
| Q |
149 |
aaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
||||||||||| |||||| |||||||| ||| |||| |||||||||| ||||||||||| ||||| ||||| |
|
|
| T |
31573995 |
aaggtttagaagccaacacgaaaactaggatttgtagagttttctcttggcaacaaacactatggttgggattg |
31573922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 77; Significance: 7e-36; HSPs: 35)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 13893341 - 13893461
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagatt |
221 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| | ||||||||| ||||||||||||||||| |||| |
|
|
| T |
13893341 |
tatcaaatgaaaaagtgtgtagaaaacaaggtttagaagtcaacataaaaactagggtttatagagaattctcttggcaacaaacactagggttgggatt |
13893440 |
T |
 |
| Q |
222 |
g-ttttgattcaccttgaaca |
241 |
Q |
| |
|
| ||||||||||||||||||| |
|
|
| T |
13893441 |
gtttttgattcaccttgaaca |
13893461 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 5858425 - 5858545
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| || |
|
|
| T |
5858425 |
tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttggga |
5858523 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
5858524 |
ttgttttgattcaccttgaaca |
5858545 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 10613081 - 10612961
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaagg-tttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
|||||||||| |||||| |||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| || |
|
|
| T |
10613081 |
tatcatatgataaagtgtgtagaaaaatagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttggga |
10612983 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
10612982 |
ttgttttgattcaccttgaaca |
10612961 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 47878474 - 47878354
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| || |
|
|
| T |
47878474 |
tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttggga |
47878376 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
47878375 |
ttgttttgattcaccttgaaca |
47878354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 10896884 - 10897004
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaagg-tttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| || |
|
|
| T |
10896884 |
tatcagatgataaagtgtgtagaaaaatagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttggga |
10896982 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
10896983 |
ttgttttgattcaccttgaaca |
10897004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 142 - 241
Target Start/End: Original strand, 3329792 - 3329892
Alignment:
| Q |
142 |
agaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaac |
240 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| || |||||||||||||| || |||||||||||||||||||| |
|
|
| T |
3329792 |
agaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaataaacactagggttgggaatgttttgattcaccttgaac |
3329891 |
T |
 |
| Q |
241 |
a |
241 |
Q |
| |
|
| |
|
|
| T |
3329892 |
a |
3329892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 27762287 - 27762169
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat |
220 |
Q |
| |
|
||||| |||| |||||| ||||||| || ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||| |
|
|
| T |
27762287 |
tatcagatgataaagtgtgtagaaa-cagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgagat |
27762190 |
T |
 |
| Q |
221 |
tgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||| |||| |
|
|
| T |
27762189 |
tgttttgattcaccttaaaca |
27762169 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 47883184 - 47883065
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat |
220 |
Q |
| |
|
||||| |||| |||||| |||||||||| | ||||||| |||||||||||||||||||||||||| |||||||||||| ||| ||||||| ||||| ||| |
|
|
| T |
47883184 |
tatcagatgataaagtgtgtagaaaacaggatttagaagccaacatacaaactagggtttatagataatttctcttggcaac-aacactatggttgggat |
47883086 |
T |
 |
| Q |
221 |
tgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
47883085 |
tgttttgattcaccttgaaca |
47883065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 38002767 - 38002868
Alignment:
| Q |
140 |
gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga |
238 |
Q |
| |
|
|||||||||| | ||||||| ||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
38002767 |
gtagaaaacaggatttagaagtcaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgagattgttttgattcaccttga |
38002865 |
T |
 |
| Q |
239 |
aca |
241 |
Q |
| |
|
||| |
|
|
| T |
38002866 |
aca |
38002868 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 54193104 - 54193225
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| || |
|
|
| T |
54193104 |
tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttggga |
54193202 |
T |
 |
| Q |
220 |
ttg-ttttgattcaccttgaaca |
241 |
Q |
| |
|
||| ||||||||||||||||||| |
|
|
| T |
54193203 |
ttgtttttgattcaccttgaaca |
54193225 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 22626287 - 22626167
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || ||||||||||||||||||||||||||||||||| || |||||||||||| ||| ||| ||||||||| || |
|
|
| T |
22626287 |
tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatggagaatttctcttggcaac-aactctagggttggga |
22626189 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
22626188 |
ttgttttgattcaccttgaaca |
22626167 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 10949561 - 10949443
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat |
220 |
Q |
| |
|
||||| |||| |||||| |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||| ||| |||||||| ||| |
|
|
| T |
10949561 |
tatcagatgataaagtgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaac-aactctagggtt-cgat |
10949464 |
T |
 |
| Q |
221 |
tgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
10949463 |
tgttttgattcaccttgaaca |
10949443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 10595323 - 10595217
Alignment:
| Q |
135 |
agtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcac |
233 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||||| |||||||||||||||| |
|
|
| T |
10595323 |
agtgtgtagaaaaaaaggtttagaaaccaacatacaaactagggtttatagagaatttatcttggcaac-aacactagggtttggattgttttgattcac |
10595225 |
T |
 |
| Q |
234 |
cttgaaca |
241 |
Q |
| |
|
| |||||| |
|
|
| T |
10595224 |
catgaaca |
10595217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 29914246 - 29914136
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| || ||||||||| ||||||| |||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||||||| |
|
|
| T |
29914246 |
aaaagtgtgtagaaaaacagggtttagaagccaacattcaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgat |
29914148 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
29914147 |
tcaccttgaaca |
29914136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 15823889 - 15823793
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| ||| |||||| ||||||||||||||||||| |||||||| | |||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
15823889 |
aaaacaaggtttggaagccaaca-acaaactagggtttatagagttttctctttgaaacaaacactagggctgagattgttttgattcaccttgaaca |
15823793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 11079397 - 11079516
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat |
220 |
Q |
| |
|
||||| |||| |||||| ||| | | || ||||||||| |||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||| |
|
|
| T |
11079397 |
tatcagatgataaagtgtgtatatagcagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttgggat |
11079495 |
T |
 |
| Q |
221 |
tgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
11079496 |
tgttttgattcatcttgaaca |
11079516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 16462092 - 16462202
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| | ||| ||| |||||||| |||||||||||| |
|
|
| T |
16462092 |
aaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttacagagaatttctcttagcaac-aactatagggttgggattgttttgat |
16462190 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
16462191 |
tcaccttgaaca |
16462202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 4535493 - 4535613
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || ||||||||| |||||||||||||||||||| ||||| |||||||||||| ||| ||||||||||||| | |
|
|
| T |
4535493 |
tatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggttcatagagaatttctcttggcaac-aacactagggttgggt |
4535591 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||| ||||||| |
|
|
| T |
4535592 |
ttgttttgattcactttgaaca |
4535613 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 26762941 - 26763033
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttg |
237 |
Q |
| |
|
|||||| ||||||||||| |||| |||||||||| |||||||| ||||||| ||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
26762941 |
aaaacagggtttagaaacgaaca-acaaactaggatttatagagatttctcctgggaacaaacactagggttgtgattgatttgattcaccttg |
26763033 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 54188410 - 54188508
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattg-ttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| |||||||||| |||||||||||| ||| ||||||||| ||| ||||| ||||||||||||||||||| |
|
|
| T |
54188410 |
aaaacagggtttagaaaccaacatacaaactaaggtttatagagaatttctcttggcaac-aacactaggtttgggattgtttttgattcaccttgaaca |
54188508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 6303201 - 6303309
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
6303201 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
6303297 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
6303298 |
tcaccttgaaca |
6303309 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 10094365 - 10094257
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
10094365 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
10094269 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
10094268 |
tcaccttgaaca |
10094257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 10100382 - 10100274
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
10100382 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
10100286 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
10100285 |
tcaccttgaaca |
10100274 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 10201245 - 10201137
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
10201245 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
10201149 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
10201148 |
tcaccttgaaca |
10201137 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 10208291 - 10208183
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
10208291 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
10208195 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
10208194 |
tcaccttgaaca |
10208183 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 235
Target Start/End: Original strand, 16996780 - 16996868
Alignment:
| Q |
147 |
acaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcacct |
235 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||||||| | ||||||||| || |||||||||||||| | ||||||||||||||| |
|
|
| T |
16996780 |
acaaggtttagaagccaacaaacaaactagggtttatagagaattctcttggtaataaacactagggttggaaatgttttgattcacct |
16996868 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 27544177 - 27544272
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||||||||||||||| |
|
|
| T |
27544177 |
aaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaaca |
27544272 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 20031574 - 20031501
Alignment:
| Q |
168 |
acaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||| |||||||| |||||||||||| ||||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
20031574 |
acaaactaggctttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaaca |
20031501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 27703450 - 27703353
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggttta-tagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||| | |||| | |||||||||||| |||| ||||||||||| | ||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
27703450 |
aaaacaaggtttagaagcaaaca-agaaactagggttttgtagagatttctcttggcatcaaacactaggatttggattgttttgattcaccttgaaca |
27703353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 46966921 - 46966831
Alignment:
| Q |
151 |
ggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||| |||||| ||| || |||||||||| ||| ||||||| |||||||||||||||||||||||||| |||||| ||| |||| |
|
|
| T |
46966921 |
ggtttagaagccaacaacaaaattaaggtttatagagattcctcttggcaacaaacactagggttgagattgtttcgattcatcttaaaca |
46966831 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 198
Target Start/End: Complemental strand, 48390523 - 48390445
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgg |
198 |
Q |
| |
|
||||| |||| |||||| |||||||| || ||||||||| || ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
48390523 |
tatcagatgataaagtgtgtagaaaaacagggtttagaagccgacatacaaactagggtttatagagaatttctcttgg |
48390445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 42297876 - 42297839
Alignment:
| Q |
204 |
aacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
42297876 |
aacactaggattgagattgttttgattcaccttgaaca |
42297839 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 7417967 - 7418026
Alignment:
| Q |
140 |
gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgg |
198 |
Q |
| |
|
||||||||| ||||||||| |||||||| ||||||||||||||| | |||||||||||| |
|
|
| T |
7417967 |
gtagaaaacggggtttagaagccaacataaaaactagggtttataaagaatttctcttgg |
7418026 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 1618934 - 1618882
Alignment:
| Q |
143 |
gaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctct |
195 |
Q |
| |
|
|||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| |
|
|
| T |
1618934 |
gaaaacaagggtttagaaacaaaca-acaaactagggtttatagagatttctct |
1618882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 13419870 - 13419943
Alignment:
| Q |
149 |
aaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
|||||||| || |||||| |||||||||||| |||| || ||||||| ||||||||||||||||| ||||| |
|
|
| T |
13419870 |
aaggtttaaaagccaacaagaaaactagggtttgtagagtttgctcttggcaacaaacactagggttgggattg |
13419943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 188545 - 188425
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| || |
|
|
| T |
188545 |
tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttggga |
188447 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
188446 |
ttgttttgattcaccttgaaca |
188425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 74; Significance: 5e-34; HSPs: 30)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 35894564 - 35894444
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| || |
|
|
| T |
35894564 |
tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttggga |
35894466 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
35894465 |
ttgttttgattcaccttgaaca |
35894444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 12781523 - 12781404
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat |
220 |
Q |
| |
|
||||| |||| |||||| |||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||| ||| ||||||||||||| ||| |
|
|
| T |
12781523 |
tatcagatgataaagtgtgtagaaaacagggtttagaaaccaacattcaaactagggtttatagagaatttctcttggcaac-aacactagggttgggat |
12781425 |
T |
 |
| Q |
221 |
tgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||| |||| |
|
|
| T |
12781424 |
tgttttgattcaccttaaaca |
12781404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 38190877 - 38190996
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat |
220 |
Q |
| |
|
||||| |||| |||||| |||||||||| ||||||||| |||||||||||||||||||||||| | |||||||||||| ||| ||||||||||||| ||| |
|
|
| T |
38190877 |
tatcagatgataaagtgtgtagaaaacagggtttagaagccaacatacaaactagggtttataaataatttctcttggcaac-aacactagggttgggat |
38190975 |
T |
 |
| Q |
221 |
tgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
38190976 |
tgttttgattcaccttgaaca |
38190996 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 22712819 - 22712699
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||| ||||||||| || |
|
|
| T |
22712819 |
tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aactctagggttggga |
22712721 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
22712720 |
ttgttttgattcaccttgaaca |
22712699 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 30478873 - 30478993
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaag-gtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| || |
|
|
| T |
30478873 |
tatcagatgataaagtgtgtagaaaaacagagtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttggga |
30478971 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
30478972 |
ttgttttgattcaccttgaaca |
30478993 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 17932523 - 17932633
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| || |||||| ||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| |||||||||||| |
|
|
| T |
17932523 |
aaaagtgtgtagaaaaacagggtttataaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttgggattgttttgat |
17932621 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
17932622 |
tcaccttgaaca |
17932633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 27517919 - 27517822
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |||||||||| | ||| ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
27517919 |
aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctctttgcaac-aacactagggttgggattgttttgattcaccttgaaca |
27517822 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 17943417 - 17943536
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat |
220 |
Q |
| |
|
||||| |||| || ||| |||||||| | ||||||||| ||||||||||||||| |||||||||| |||||||||||| ||||| ||||||||||| ||| |
|
|
| T |
17943417 |
tatcagatgataaggtgtgtagaaaatagggtttagaagccaacatacaaactatggtttatagagaatttctcttggcaacaa-cactagggttgggat |
17943515 |
T |
 |
| Q |
221 |
tgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
17943516 |
tgttttgattcaccttgaaca |
17943536 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 33674698 - 33674588
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| || |||||||||||||||||| |||||| |||||||||| |||||||||||| ||||| ||||||||||| |||||||||||| |
|
|
| T |
33674698 |
aaaagtgtgtagaaaaacagggtttagaaaccaacatataaactatggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgat |
33674600 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
33674599 |
tcaccttgaaca |
33674588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 20050325 - 20050205
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttatag-aaatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || ||| ||||||||||||||||||||||||||||||| ||||||||||| | ||| ||| ||||||||| || |
|
|
| T |
20050325 |
tatcagatgataaagtgtgtagaaaaacagggtatagaaaccaacatacaaactagggtttatagaaaatttctctttgcaac-aactctagggttggga |
20050227 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
20050226 |
ttgttttgattcaccttgaaca |
20050205 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 33603897 - 33603993
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||| ||||||||||| |||| ||||||||||||||||||| |||||| |||| |||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
33603897 |
aaaacatggtttagaaacaaaca-acaaactagggtttatagagatttcttttggcaacaaacattagggttgggattgttttgattcaccttgaaca |
33603993 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 37171055 - 37170935
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || ||||||||| |||||||||||||||||||||||||| |||||||||||| ||| ||||| ||||||| || |
|
|
| T |
37171055 |
tatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaac-aacaccagggttggga |
37170957 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
||||||||| |||||||||||| |
|
|
| T |
37170956 |
ttgttttgaatcaccttgaaca |
37170935 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 22717518 - 22717408
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| | ||| ||| |||||||| |||||||||||| |
|
|
| T |
22717518 |
aaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttacagagaatttctcttagcaac-aactatagggttgggattgttttgat |
22717420 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
22717419 |
tcaccttgaaca |
22717408 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 20055068 - 20054948
Alignment:
| Q |
122 |
tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga |
219 |
Q |
| |
|
||||| |||| |||||| |||||||| || ||| ||||||||||||||||||||| |||||||||| |||||||||| | ||| ||| ||||||||| || |
|
|
| T |
20055068 |
tatcagatgataaagtgtgtagaaaaacagggtatagaaaccaacatacaaactaaggtttatagagaatttctctttgcaac-aactctagggttggga |
20054970 |
T |
 |
| Q |
220 |
ttgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
20054969 |
ttgttttgattcaccttgaaca |
20054948 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 30262052 - 30261962
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcacct |
235 |
Q |
| |
|
|||||| ||||||||| |||||| |||||||| |||||||||| |||||||||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
30262052 |
aaaacatggtttagaagccaaca-acaaactacggtttatagagttttctcttggcaataaacactagggttgagattgttttgattcacct |
30261962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 17462327 - 17462435
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
17462327 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
17462423 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
17462424 |
tcaccttgaaca |
17462435 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 39686874 - 39686982
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
39686874 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
39686970 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
39686971 |
tcaccttgaaca |
39686982 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 45567300 - 45567408
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
45567300 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
45567396 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
45567397 |
tcaccttgaaca |
45567408 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 2736096 - 2736204
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
2736096 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
2736192 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
2736193 |
tcacattgaaca |
2736204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 2740832 - 2740940
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
2740832 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
2740928 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
2740929 |
tcacattgaaca |
2740940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 39679936 - 39680044
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||| |||||||| ||||||||||||||||||| ||| ||| |||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
39679936 |
aaaagtgtgtagaaaaacaaggttta--aaccaacaaacaaactagggtttatagagaatctcttttggcaacaa-ctctagggttgggattgttttgat |
39680032 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
39680033 |
tcaccttgaaca |
39680044 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 26345575 - 26345653
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
||||||||| |||||| |||||| |||||||| ||| |||| ||||||||||| |||||||| |||||||||||||| |
|
|
| T |
26345575 |
aaaacaaggattagaagccaacaacaaaactaggatttgtagagatttctcttggtaacaaacattagggttgagattg |
26345653 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 43139354 - 43139434
Alignment:
| Q |
143 |
gaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
|||||||||| ||||||| |||||| | ||||| |||||| |||| || ||||||| ||||||||||||||||||||||| |
|
|
| T |
43139354 |
gaaaacaagggtttagaagccaacacaaaaacttgggtttgtagagtttgctcttggcaacaaacactagggttgagattg |
43139434 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 45158257 - 45158303
Alignment:
| Q |
191 |
tctcttgggaacaaacactagggttgagattgttttgattcaccttg |
237 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
45158257 |
tctcttggaaacaaacattagggttgagattgttttgattcatcttg |
45158303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 30720872 - 30720820
Alignment:
| Q |
170 |
aaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
|||||||||||| |||| | ||||||||| | ||||||||||||||||||||| |
|
|
| T |
30720872 |
aaactagggtttgtagagaattctcttggcaccaaacactagggttgagattg |
30720820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 222
Target Start/End: Complemental strand, 27248193 - 27248111
Alignment:
| Q |
140 |
gtagaaaacaaggtttagaaaccaacatacaaa-ctagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
||||||||||||| |||||| |||||| ||||| ||| ||||| |||| | ||||||||| ||||||||||| || |||||||| |
|
|
| T |
27248193 |
gtagaaaacaaggattagaagccaaca-acaaagctaaggtttgtagataattctcttggcaacaaacactacgggtgagattg |
27248111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 35028556 - 35028634
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg |
222 |
Q |
| |
|
|||||| ||||||||| |||||| ||| | |||||| |||| || ||||||| ||||||||||||||||||||||| |
|
|
| T |
35028556 |
aaaacagggtttagaatccaacaataaaatttgggtttgtagagtttgctcttggtaacaaacactagggttgagattg |
35028634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 39287183 - 39287256
Alignment:
| Q |
140 |
gtagaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagg |
212 |
Q |
| |
|
||||||||||||| ||||||| |||||| |||||||||||| |||| | ||||||| | ||||||||||||| |
|
|
| T |
39287183 |
gtagaaaacaagggtttagaagccaacaagaaaactagggtttgtagagaattctcttagcaacaaacactagg |
39287256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 10942798 - 10942726
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttg |
216 |
Q |
| |
|
||||||||| |||||| |||||| | ||||||| || |||| | ||||||||| ||||||||||||||||| |
|
|
| T |
10942798 |
aaaacaaggattagaagccaacaataatactagggattgtagagaattctcttggcaacaaacactagggttg |
10942726 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 10948667 - 10948595
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttg |
216 |
Q |
| |
|
||||||||| |||||| |||||| | ||||||| || |||| | ||||||||| ||||||||||||||||| |
|
|
| T |
10948667 |
aaaacaaggattagaagccaacaataatactagggattgtagagaattctcttggcaacaaacactagggttg |
10948595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0256 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0256
Description:
Target: scaffold0256; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 16214 - 16324
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| || ||||||||| ||||||| |||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||||||| |
|
|
| T |
16214 |
aaaagtgtgtagaaaaacagggtttagaagccaacattcaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgat |
16312 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
16313 |
tcaccttgaaca |
16324 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0209 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0209
Description:
Target: scaffold0209; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 17266 - 17169
Alignment:
| Q |
144 |
aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca |
241 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| |||||||||| |||| |||||||| |
|
|
| T |
17266 |
aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttgggattgttttgtttcatcttgaaca |
17169 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0131 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0131
Description:
Target: scaffold0131; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 31032 - 31140
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
31032 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
31128 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
31129 |
tcaccttgaaca |
31140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 224710 - 224818
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |
|
|
| T |
224710 |
aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat |
224806 |
T |
 |
| Q |
230 |
tcaccttgaaca |
241 |
Q |
| |
|
|||||||||||| |
|
|
| T |
224807 |
tcaccttgaaca |
224818 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1764 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1764
Description:
Target: scaffold1764; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 1325 - 1391
Alignment:
| Q |
132 |
aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctctt |
196 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
1325 |
aaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaatttctctt |
1391 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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