View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4046_low_26 (Length: 206)
Name: NF4046_low_26
Description: NF4046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4046_low_26 |
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Alignment Details
Target: chr4 (Bit Score: 127; Significance: 9e-66; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 34 - 172
Target Start/End: Original strand, 20975164 - 20975302
Alignment:
| Q |
34 |
aaacaaaatacaaaattgaaatatccttcggtctctaattatatgatcaatttatcctcttattcttttgttaattagaatcctagaatctttcgattac |
133 |
Q |
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| T |
20975164 |
aaacaaaatacaaaattgaaatatccttcggtctctaattatatgatcaatttatcctcttattcttctgttatttagaatcctagaatctttcaattac |
20975263 |
T |
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| Q |
134 |
ttgtgtaaaagaaatcctccttcaaccgctatcttaaag |
172 |
Q |
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| T |
20975264 |
ttgtgtaaaagaaatcctccttcaaccgctatcttaaag |
20975302 |
T |
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