View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4046_low_4 (Length: 493)

Name: NF4046_low_4
Description: NF4046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4046_low_4
NF4046_low_4
[»] chr1 (61 HSPs)
chr1 (197-478)||(38736805-38737082)
chr1 (20-196)||(29657781-29657957)
chr1 (20-196)||(5694331-5694507)
chr1 (41-200)||(30294377-30294536)
chr1 (20-196)||(12072062-12072238)
chr1 (36-196)||(47010019-47010179)
chr1 (20-196)||(51065748-51065924)
chr1 (20-170)||(15227749-15227899)
chr1 (43-168)||(6770370-6770495)
chr1 (35-200)||(9266724-9266889)
chr1 (20-196)||(18043172-18043348)
chr1 (20-196)||(42769990-42770166)
chr1 (20-191)||(13961222-13961392)
chr1 (20-191)||(38162860-38163031)
chr1 (20-196)||(45431289-45431464)
chr1 (42-196)||(19031815-19031969)
chr1 (20-169)||(29683205-29683355)
chr1 (41-196)||(3097690-3097842)
chr1 (20-153)||(17333325-17333457)
chr1 (28-189)||(24178470-24178631)
chr1 (20-200)||(41730315-41730498)
chr1 (18-189)||(3784720-3784891)
chr1 (43-170)||(35985647-35985774)
chr1 (35-169)||(36446352-36446485)
chr1 (20-170)||(51368811-51368961)
chr1 (41-169)||(8472941-8473069)
chr1 (20-196)||(14350279-14350453)
chr1 (41-197)||(48071513-48071668)
chr1 (41-196)||(45449244-45449399)
chr1 (43-196)||(50128172-50128325)
chr1 (41-198)||(23473462-23473619)
chr1 (41-158)||(38335200-38335317)
chr1 (41-169)||(43286753-43286881)
chr1 (42-166)||(47532701-47532824)
chr1 (20-196)||(38701937-38702109)
chr1 (54-172)||(12306962-12307079)
chr1 (20-134)||(29210423-29210537)
chr1 (20-168)||(30657618-30657760)
chr1 (20-197)||(48383110-48383287)
chr1 (61-190)||(52431632-52431761)
chr1 (34-164)||(30217784-30217916)
chr1 (41-169)||(35700679-35700805)
chr1 (54-173)||(37315291-37315409)
chr1 (41-196)||(15282519-15282669)
chr1 (105-198)||(19010685-19010778)
chr1 (41-165)||(52749633-52749757)
chr1 (43-133)||(39497340-39497430)
chr1 (36-117)||(26228219-26228300)
chr1 (34-168)||(39081825-39081958)
chr1 (34-112)||(39912363-39912441)
chr1 (20-207)||(28725894-28726082)
chr1 (56-143)||(37503260-37503346)
chr1 (89-139)||(14881036-14881086)
chr1 (41-125)||(28481875-28481954)
chr1 (36-190)||(33644341-33644495)
chr1 (34-84)||(19011108-19011158)
chr1 (41-150)||(3838824-3838932)
chr1 (42-90)||(10976008-10976056)
chr1 (136-190)||(26228304-26228358)
chr1 (70-106)||(19011057-19011093)
chr1 (20-166)||(52702175-52702322)
[»] chr2 (44 HSPs)
chr2 (20-196)||(31438656-31438832)
chr2 (20-196)||(44587912-44588088)
chr2 (20-196)||(20552941-20553117)
chr2 (28-197)||(30486228-30486397)
chr2 (41-190)||(1859193-1859342)
chr2 (20-169)||(32860112-32860260)
chr2 (20-168)||(561546-561694)
chr2 (28-196)||(22068320-22068487)
chr2 (42-198)||(31390044-31390200)
chr2 (20-170)||(4381805-4381955)
chr2 (42-196)||(26387064-26387218)
chr2 (20-197)||(32360868-32361045)
chr2 (20-196)||(27856396-27856572)
chr2 (41-196)||(22567633-22567788)
chr2 (41-200)||(22887781-22887940)
chr2 (29-170)||(34442558-34442699)
chr2 (34-170)||(6580213-6580349)
chr2 (34-196)||(28600991-28601152)
chr2 (34-166)||(38590904-38591036)
chr2 (42-196)||(8969407-8969561)
chr2 (42-196)||(25782833-25782984)
chr2 (34-196)||(35851750-35851913)
chr2 (20-170)||(3668139-3668288)
chr2 (41-169)||(2898102-2898230)
chr2 (42-170)||(5093565-5093693)
chr2 (41-191)||(13574035-13574184)
chr2 (41-190)||(43637195-43637343)
chr2 (43-191)||(4022484-4022631)
chr2 (34-170)||(27584762-27584898)
chr2 (36-163)||(5881243-5881374)
chr2 (20-134)||(26891725-26891839)
chr2 (43-159)||(11021259-11021375)
chr2 (41-166)||(29102313-29102438)
chr2 (34-143)||(38296201-38296310)
chr2 (42-168)||(25772142-25772269)
chr2 (54-143)||(15079012-15079100)
chr2 (54-169)||(39531868-39531981)
chr2 (61-168)||(15146683-15146789)
chr2 (54-164)||(34123057-34123166)
chr2 (219-285)||(16367995-16368061)
chr2 (54-143)||(10820528-10820615)
chr2 (41-92)||(30217667-30217719)
chr2 (36-68)||(43993180-43993212)
chr2 (20-68)||(44854468-44854516)
[»] chr6 (40 HSPs)
chr6 (18-196)||(32985193-32985371)
chr6 (43-197)||(1391177-1391331)
chr6 (20-198)||(3515776-3515954)
chr6 (20-198)||(12145115-12145293)
chr6 (20-200)||(7851155-7851335)
chr6 (20-196)||(392106-392282)
chr6 (20-190)||(2350662-2350832)
chr6 (34-170)||(29451141-29451277)
chr6 (20-196)||(32929508-32929684)
chr6 (34-170)||(26467150-26467286)
chr6 (20-196)||(4215705-4215881)
chr6 (29-196)||(18276612-18276782)
chr6 (34-196)||(23402162-23402324)
chr6 (20-196)||(12525729-12525905)
chr6 (41-196)||(25165413-25165568)
chr6 (36-190)||(1840253-1840407)
chr6 (41-166)||(2580983-2581108)
chr6 (34-169)||(3026036-3026171)
chr6 (35-188)||(11115106-11115256)
chr6 (20-190)||(27433502-27433672)
chr6 (20-196)||(21878353-21878523)
chr6 (41-170)||(35043921-35044049)
chr6 (20-170)||(13416985-13417138)
chr6 (20-134)||(20897958-20898072)
chr6 (42-196)||(29978264-29978417)
chr6 (42-196)||(34851849-34852003)
chr6 (20-127)||(34396596-34396703)
chr6 (54-165)||(961053-961164)
chr6 (43-170)||(5323433-5323560)
chr6 (35-168)||(9661011-9661144)
chr6 (29-134)||(34477612-34477717)
chr6 (29-165)||(23629607-23629743)
chr6 (41-169)||(28225252-28225379)
chr6 (54-144)||(31280365-31280455)
chr6 (34-109)||(13529479-13529554)
chr6 (43-187)||(11616141-11616285)
chr6 (20-190)||(34706730-34706901)
chr6 (120-170)||(22417303-22417353)
chr6 (34-170)||(1127839-1127976)
chr6 (95-163)||(28564321-28564388)
[»] chr8 (53 HSPs)
chr8 (20-198)||(20831551-20831729)
chr8 (20-197)||(34228692-34228869)
chr8 (20-196)||(27988500-27988675)
chr8 (20-196)||(28045802-28045977)
chr8 (20-191)||(30675578-30675748)
chr8 (20-198)||(16888542-16888719)
chr8 (20-196)||(4537744-4537920)
chr8 (43-198)||(7304516-7304671)
chr8 (41-196)||(11112670-11112825)
chr8 (20-196)||(168476-168652)
chr8 (41-196)||(32113939-32114095)
chr8 (34-169)||(28626792-28626927)
chr8 (36-170)||(33357155-33357289)
chr8 (20-169)||(12203865-12204013)
chr8 (20-169)||(12448293-12448441)
chr8 (34-191)||(16890485-16890642)
chr8 (20-196)||(13643022-13643197)
chr8 (20-196)||(13743447-13743622)
chr8 (23-189)||(42034988-42035154)
chr8 (20-169)||(21595857-21596005)
chr8 (20-169)||(29444167-29444316)
chr8 (29-170)||(36730463-36730604)
chr8 (28-170)||(2805286-2805428)
chr8 (34-168)||(4648218-4648352)
chr8 (36-170)||(9063078-9063212)
chr8 (20-197)||(16394060-16394237)
chr8 (31-170)||(16785107-16785246)
chr8 (20-166)||(43119227-43119373)
chr8 (49-170)||(3930259-3930380)
chr8 (29-192)||(9253906-9254068)
chr8 (41-198)||(9537822-9537979)
chr8 (20-165)||(37373216-37373360)
chr8 (41-156)||(10870383-10870498)
chr8 (35-198)||(40831302-40831465)
chr8 (43-190)||(29235268-29235415)
chr8 (73-170)||(39406905-39407002)
chr8 (42-159)||(17467635-17467752)
chr8 (41-150)||(42433590-42433698)
chr8 (197-360)||(40369791-40369954)
chr8 (82-168)||(24843307-24843393)
chr8 (32-150)||(22956728-22956845)
chr8 (61-156)||(22451835-22451929)
chr8 (44-119)||(34192809-34192884)
chr8 (42-115)||(9278244-9278317)
chr8 (20-115)||(10618028-10618123)
chr8 (64-165)||(30933353-30933453)
chr8 (36-87)||(12652656-12652707)
chr8 (82-150)||(36057897-36057967)
chr8 (103-170)||(14191036-14191103)
chr8 (20-170)||(39751497-39751648)
chr8 (120-191)||(35695612-35695683)
chr8 (36-150)||(40267947-40268062)
chr8 (20-190)||(43714194-43714364)
[»] chr5 (31 HSPs)
chr5 (20-196)||(11957967-11958143)
chr5 (20-196)||(34650833-34651008)
chr5 (49-190)||(20175266-20175406)
chr5 (34-198)||(21547392-21547556)
chr5 (20-196)||(13661818-13661994)
chr5 (20-196)||(8787349-8787525)
chr5 (20-196)||(35132532-35132707)
chr5 (20-196)||(35504241-35504416)
chr5 (29-198)||(40057326-40057495)
chr5 (20-190)||(6283572-6283742)
chr5 (41-163)||(9721640-9721762)
chr5 (44-170)||(11846106-11846232)
chr5 (20-198)||(10054351-10054528)
chr5 (43-196)||(40564404-40564557)
chr5 (54-170)||(12506340-12506456)
chr5 (34-142)||(13470175-13470283)
chr5 (20-134)||(19647720-19647834)
chr5 (55-168)||(10955997-10956109)
chr5 (41-168)||(31909662-31909784)
chr5 (20-134)||(10069979-10070092)
chr5 (29-122)||(4837276-4837369)
chr5 (42-169)||(19436865-19436990)
chr5 (41-158)||(39066973-39067091)
chr5 (31-159)||(39069402-39069527)
chr5 (70-165)||(4268622-4268716)
chr5 (34-190)||(31467743-31467900)
chr5 (42-118)||(2619635-2619711)
chr5 (41-107)||(6284826-6284892)
chr5 (52-141)||(22973727-22973815)
chr5 (136-168)||(2619596-2619628)
chr5 (138-170)||(10955977-10956009)
[»] chr3 (49 HSPs)
chr3 (20-200)||(272230-272410)
chr3 (20-198)||(46352644-46352822)
chr3 (20-196)||(39074429-39074604)
chr3 (20-198)||(49893341-49893519)
chr3 (20-196)||(52520691-52520867)
chr3 (18-189)||(858597-858768)
chr3 (43-197)||(10617283-10617437)
chr3 (20-170)||(48725281-48725431)
chr3 (34-196)||(42964249-42964411)
chr3 (20-196)||(4168193-4168369)
chr3 (36-198)||(41553938-41554100)
chr3 (28-189)||(28139327-28139488)
chr3 (20-192)||(41304015-41304185)
chr3 (20-196)||(43786881-43787057)
chr3 (28-170)||(7468429-7468570)
chr3 (28-166)||(53489854-53489992)
chr3 (41-184)||(2505380-2505523)
chr3 (43-190)||(42548128-42548274)
chr3 (28-170)||(18014690-18014832)
chr3 (72-200)||(6842681-6842809)
chr3 (34-170)||(40362606-40362742)
chr3 (62-168)||(33140937-33141043)
chr3 (42-196)||(41993620-41993773)
chr3 (34-163)||(29241661-29241790)
chr3 (41-164)||(2938072-2938195)
chr3 (34-169)||(20924016-20924151)
chr3 (42-170)||(38852246-38852377)
chr3 (43-168)||(50298973-50299098)
chr3 (42-166)||(22248918-22249042)
chr3 (20-168)||(50395591-50395738)
chr3 (34-172)||(24488390-24488528)
chr3 (29-170)||(49529292-49529436)
chr3 (34-170)||(52246606-52246743)
chr3 (36-196)||(43269739-43269899)
chr3 (35-158)||(2119456-2119577)
chr3 (42-168)||(13159929-13160055)
chr3 (43-196)||(11308211-11308363)
chr3 (35-169)||(50359213-50359347)
chr3 (52-164)||(21010039-21010147)
chr3 (85-190)||(52552549-52552652)
chr3 (48-168)||(31514829-31514948)
chr3 (34-91)||(2391631-2391688)
chr3 (34-91)||(2393392-2393449)
chr3 (58-134)||(2362880-2362955)
chr3 (24-89)||(23925294-23925359)
chr3 (38-168)||(25743837-25743967)
chr3 (41-92)||(52718198-52718249)
chr3 (71-109)||(6842604-6842642)
chr3 (35-88)||(34300721-34300775)
[»] scaffold0021 (1 HSPs)
scaffold0021 (20-207)||(116214-116401)
[»] chr7 (49 HSPs)
chr7 (34-197)||(4628590-4628753)
chr7 (28-169)||(29993514-29993655)
chr7 (41-196)||(13064876-13065032)
chr7 (41-169)||(43594063-43594191)
chr7 (20-198)||(24438487-24438665)
chr7 (20-197)||(24798402-24798578)
chr7 (37-196)||(47083082-47083240)
chr7 (41-170)||(45045801-45045930)
chr7 (41-197)||(525075-525230)
chr7 (20-196)||(12218437-12218612)
chr7 (43-170)||(7689226-7689353)
chr7 (34-188)||(30810679-30810833)
chr7 (34-196)||(34606285-34606447)
chr7 (20-196)||(34333294-34333469)
chr7 (41-165)||(11686353-11686479)
chr7 (20-191)||(18485971-18486142)
chr7 (36-198)||(5239311-5239473)
chr7 (41-170)||(47839523-47839652)
chr7 (36-164)||(8754617-8754745)
chr7 (20-166)||(28587920-28588065)
chr7 (42-170)||(23363193-23363321)
chr7 (34-170)||(42044319-42044455)
chr7 (41-172)||(46716669-46716800)
chr7 (34-170)||(47657004-47657138)
chr7 (34-170)||(1737004-1737139)
chr7 (42-170)||(18117175-18117303)
chr7 (38-134)||(34546376-34546472)
chr7 (42-170)||(23357736-23357861)
chr7 (29-135)||(27456174-27456280)
chr7 (34-137)||(37631601-37631704)
chr7 (60-169)||(37674131-37674240)
chr7 (36-170)||(5729372-5729506)
chr7 (20-166)||(28262041-28262182)
chr7 (42-170)||(33636484-33636612)
chr7 (36-144)||(4100577-4100684)
chr7 (23-141)||(36437390-36437507)
chr7 (34-143)||(18469993-18470101)
chr7 (55-143)||(22739868-22739957)
chr7 (41-164)||(29835735-29835859)
chr7 (41-120)||(3021922-3022000)
chr7 (41-141)||(4087654-4087752)
chr7 (37-157)||(18220479-18220597)
chr7 (85-144)||(47118041-47118100)
chr7 (60-150)||(20116940-20117029)
chr7 (54-163)||(18220704-18220812)
chr7 (72-152)||(13556474-13556553)
chr7 (34-79)||(22973622-22973667)
chr7 (23-170)||(38128304-38128452)
chr7 (20-150)||(30924036-30924167)
[»] chr4 (56 HSPs)
chr4 (41-200)||(12356275-12356434)
chr4 (20-163)||(32202514-32202656)
chr4 (20-168)||(789558-789706)
chr4 (28-170)||(32217063-32217204)
chr4 (20-190)||(43944517-43944686)
chr4 (20-198)||(54897318-54897496)
chr4 (49-196)||(36395138-36395285)
chr4 (34-191)||(54655882-54656038)
chr4 (20-196)||(16536058-16536234)
chr4 (28-196)||(29591207-29591375)
chr4 (20-198)||(4268820-4268998)
chr4 (20-196)||(4089152-4089328)
chr4 (34-189)||(50619110-50619264)
chr4 (31-166)||(42898774-42898911)
chr4 (23-196)||(7768951-7769124)
chr4 (34-198)||(6164118-6164281)
chr4 (60-196)||(30387134-30387270)
chr4 (20-196)||(33108673-33108848)
chr4 (41-164)||(19503137-19503260)
chr4 (20-190)||(18067885-18068055)
chr4 (20-166)||(47231902-47232048)
chr4 (20-190)||(52533791-52533961)
chr4 (34-200)||(54945776-54945940)
chr4 (20-153)||(15186253-15186386)
chr4 (20-196)||(43202384-43202559)
chr4 (20-163)||(3783534-3783677)
chr4 (41-164)||(4220226-4220348)
chr4 (30-165)||(28755640-28755774)
chr4 (41-163)||(39843938-39844060)
chr4 (34-168)||(24679671-24679804)
chr4 (48-170)||(30154189-30154311)
chr4 (41-166)||(37987966-37988091)
chr4 (41-165)||(31680494-31680618)
chr4 (20-199)||(5091609-5091786)
chr4 (44-169)||(46148973-46149098)
chr4 (20-134)||(54054558-54054672)
chr4 (43-152)||(49915192-49915301)
chr4 (42-170)||(55882716-55882842)
chr4 (70-196)||(16820912-16821038)
chr4 (56-134)||(46688267-46688345)
chr4 (55-168)||(50603272-50603386)
chr4 (42-170)||(53655904-53656032)
chr4 (74-170)||(39877273-39877371)
chr4 (41-134)||(42815140-42815234)
chr4 (40-169)||(52697082-52697210)
chr4 (96-196)||(53003956-53004056)
chr4 (54-166)||(53268764-53268875)
chr4 (61-170)||(41265510-41265618)
chr4 (35-168)||(1432576-1432703)
chr4 (62-170)||(31517217-31517326)
chr4 (96-166)||(8133793-8133862)
chr4 (34-106)||(50167615-50167685)
chr4 (41-141)||(17344714-17344813)
chr4 (155-195)||(46688225-46688265)
chr4 (34-190)||(28119912-28120069)
chr4 (34-170)||(20654698-20654836)
[»] scaffold0264 (1 HSPs)
scaffold0264 (20-190)||(22971-23141)
[»] scaffold0190 (1 HSPs)
scaffold0190 (20-170)||(14906-15056)
[»] scaffold0524 (1 HSPs)
scaffold0524 (42-189)||(857-1004)
[»] scaffold0113 (1 HSPs)
scaffold0113 (36-206)||(40945-41115)
[»] scaffold0188 (1 HSPs)
scaffold0188 (20-196)||(6110-6286)
[»] scaffold0003 (1 HSPs)
scaffold0003 (20-190)||(53691-53861)
[»] scaffold0045 (2 HSPs)
scaffold0045 (20-172)||(50558-50710)
scaffold0045 (41-121)||(53421-53501)
[»] scaffold1152 (1 HSPs)
scaffold1152 (23-164)||(691-832)
[»] scaffold0425 (1 HSPs)
scaffold0425 (71-200)||(10771-10900)
[»] scaffold0014 (1 HSPs)
scaffold0014 (28-168)||(68318-68458)
[»] scaffold1266 (1 HSPs)
scaffold1266 (29-168)||(311-450)
[»] scaffold0263 (1 HSPs)
scaffold0263 (29-169)||(19612-19752)
[»] scaffold0674 (1 HSPs)
scaffold0674 (29-134)||(7959-8064)
[»] scaffold0549 (1 HSPs)
scaffold0549 (29-134)||(7307-7412)
[»] scaffold0038 (1 HSPs)
scaffold0038 (41-169)||(25750-25877)
[»] scaffold0325 (1 HSPs)
scaffold0325 (47-165)||(17502-17619)
[»] scaffold0002 (1 HSPs)
scaffold0002 (42-168)||(146933-147059)
[»] scaffold0034 (1 HSPs)
scaffold0034 (20-165)||(95616-95760)
[»] scaffold0007 (1 HSPs)
scaffold0007 (75-196)||(233918-234039)
[»] scaffold0206 (1 HSPs)
scaffold0206 (41-134)||(11032-11125)
[»] scaffold0050 (2 HSPs)
scaffold0050 (42-170)||(69258-69385)
scaffold0050 (42-190)||(33689-33835)
[»] scaffold0533 (1 HSPs)
scaffold0533 (40-107)||(5069-5136)
[»] scaffold0015 (1 HSPs)
scaffold0015 (43-143)||(74526-74627)


Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 197 - 478
Target Start/End: Original strand, 38736805 - 38737082
Alignment:
Q  197 attagttaatttgcttgtgctacaagcatcttaactaacttggttggttagttacttgcacttcaagtaacttaaccaaacctaactaacaatatgagtt 296  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38736805 attagttaatttgcttgtgcttcaagcatcttaactaacttggttggttaattacttgcacttcaagtaacttaaccaaacctaattaacaatatgagtt 38736904  T
Q  297 cttaacaaactcggtaactatccaacaatcttagcctctaatttcaattatatctaaatagattttgcattagttattgattgttagttctaatgtggtc 396  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||| |||||| ||||||||    
T  38736905 cttaacaaactcagtaactatccaacaatcttagcctctaatttcaattatatctcaatagattttgcattagt--ttgattgtcagttctgatgtggtc 38737002  T
Q  397 aaannnnnnnnnnnnngaagggaaatgtggtcaatttatattaacatatatggtgtgtcaatgtgttttcaattatataaat 478  Q
    ||              |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38737003 aa--ttttttttttttgaagggaaatgtggtcaatttatattaacacatatggtgtgtcaatgtgttttcaattatataaat 38737082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 29657781 - 29657957
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  29657781 aaccggtgcccccggggcactggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtataattaattgataataaagtcaaaaa 29657880  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||||||||||| || |||||||||||||||||| |||||||||||||||| || ||| ||||||||||||| ||||    
T  29657881 cagtttccttttttggtaataattcccttttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccc 29657957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 5694331 - 5694507
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| || || |||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  5694331 aaccggtgcctccggggcactggttaaggatataaaaagggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaaaa 5694430  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||  ||| ||||||||||||| ||||    
T  5694431 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgctccgggggcaccggttagcaggaccc 5694507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 41 - 200
Target Start/End: Complemental strand, 30294536 - 30294377
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| ||||||| |||||    
T  30294536 ggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttctttttatggtaata 30294437  T
Q  141 attcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccatta 200  Q
    ||||||||||||| ||||||||||| ||||||  ||||||||||||||||| ||||||||    
T  30294436 attcccttttatggtatgcttaacctgtgctccggggacaccggttagcaggacccatta 30294377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 12072238 - 12072062
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  12072238 aaccggtgcccccggggcaccggttaaggatatgaaaaaggaaattatgtagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaaaa 12072139  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||||| |||||||| |||||||||| ||||||| |||||||||||||||| |  ||| ||||||||||||| ||||    
T  12072138 cagttttcttttatggtaataattcctttttatggtatgcttaaccagtgccccgggggcaccggttagcagcaccc 12072062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 36 - 196
Target Start/End: Original strand, 47010019 - 47010179
Alignment:
Q  36 gcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatga 135  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||| ||||||||||| | |||||||||||||||| ||||||||||||||||||||||     
T  47010019 gcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaattcaaaaacagtttccttttatgg 47010118  T
Q  136 taataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||| |||||||| |||||||||||||||||| |||| ||||||||||||| ||||    
T  47010119 taataattctcttttatggtatgcttaaccagtgctccaggggcaccggttagcaggaccc 47010179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 51065924 - 51065748
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    |||||||  |||| || ||| |||||||||||| |||||| |||||||| ||||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  51065924 aaccggtgtccccgggacactggttaaggatatgaaaaagtaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaa 51065825  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||| | |||| ||||||||||||| ||||    
T  51065824 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccaggggcaccggttagcaggaccc 51065748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 20 - 170
Target Start/End: Original strand, 15227749 - 15227899
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||||||||  |||||| |||||||||||| ||||||||||||||| |||| |||||||||||||||||| | ||||||| ||||||||||||||||    
T  15227749 aaccggtaccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaattgataataaagtcaaaaa 15227848  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgc 170  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  15227849 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgc 15227899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 43 - 168
Target Start/End: Original strand, 6770370 - 6770495
Alignment:
Q  43 ttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataat 142  Q
    |||||||||| ||||||||||||||| ||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||    
T  6770370 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttcattttatgataataat 6770469  T
Q  143 tcccttttatgatatgcttaaccagt 168  Q
    ||||||||||||||||||||||||||    
T  6770470 tcccttttatgatatgcttaaccagt 6770495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 9266889 - 9266724
Alignment:
Q  35 ggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatg 134  Q
    ||||| |||||||||||| ||||||||||||||| |||| |||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||    
T  9266889 ggcactggttaaggatatgaaaaaggaaattatatagtatttaatgcattgaaattgtgtaattaattcataataaagtcaaaaacagtttccttttatg 9266790  T
Q  135 ataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccatta 200  Q
     ||||||||| |||||||| ||| |||||||||||||| ||   ||||||||||||| ||||||||    
T  9266789 gtaataattcgcttttatggtatacttaaccagtgctccagaagcaccggttagcaggacccatta 9266724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 18043172 - 18043348
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| || || |||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  18043172 aaccggtgcctccggggcactggttaagggtataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 18043271  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||||| |||||||| |||||||||  ||||||| |||||||||||||||| |  ||| ||||||||||||| ||||    
T  18043272 cagttttcttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 18043348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 42770166 - 42769990
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||| | ||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||  |||||||    
T  42770166 aaccggtgcccccggggcactggttaatggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatatcaaaaa 42770067  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| |||||||||  ||||||| |||||||||||||||| |  ||| ||||||||||||||||||    
T  42770066 cagtttccttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcagaaccc 42769990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 13961222 - 13961392
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| ||||||||||||||||||  |||||||| ||||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  13961222 aaccggtgcccccggggcacgggttaaggatataaaaaaa-aaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaaaa 13961320  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcag 191  Q
    ||||||| ||||||| ||||||||  |||||||| |||||||||||||||||| | || |||||||||||||    
T  13961321 cagtttcattttatggtaataattttcttttatggtatgcttaaccagtgctccaagggcaccggttagcag 13961392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 38162860 - 38163031
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| || || |||||| |||||||| ||| |||||| |||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  38162860 aaccggtgcctccggggcactggttaagggtatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 38162959  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcag 191  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| |||| |  ||| |||||||||||||    
T  38162960 cagtttccttttatggtaataattcccttttatggtatgcttaacccgtgccccgggggcaccggttagcag 38163031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 45431289 - 45431464
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| |||||||||| | | |||||||||| ||||||||||||||| ||||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  45431289 aaccggtgcccccagggc-ctgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaa 45431387  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
     |||||||||||||| ||||||||| |||||||||||| |||||||||||| | || ||| ||||||| ||| ||||    
T  45431388 tagtttccttttatggtaataattctcttttatgatatacttaaccagtgccccagagactccggttatcaggaccc 45431464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 19031969 - 19031815
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    ||||||||||| ||||||||||||||| |||||||||  |||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  19031969 gttaaggatatgaaaaaggaaattatatagtagttaaaacattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataa 19031870  T
Q  142 ttcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    || ||||||||||||||||||||| || | |  | ||||||||||||||| ||||    
T  19031869 tttccttttatgatatgcttaacccgtaccccggagacaccggttagcaggaccc 19031815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 20 - 169
Target Start/End: Original strand, 29683205 - 29683355
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaa-aaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaa 118  Q
    ||||||| ||||| |||||| |||||| ||||||||| |||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||    
T  29683205 aaccggtgcccccggggcactggttaaagatataaaaaaaggaaattatatagtagttaatgcattgaaatcgtataattaatttataataaagtcaaaa 29683304  T
Q  119 acagtttccttttatgataataattcccttttatgatatgcttaaccagtg 169  Q
    |||||||| ||||||  ||||||||| |||||||| |||||||||||||||    
T  29683305 acagtttcattttatagtaataattcacttttatggtatgcttaaccagtg 29683355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 41 - 196
Target Start/End: Original strand, 3097690 - 3097842
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||| | | |||||||||||||||||||||||||||||| |||||||| |||||    
T  3097690 ggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagttttcttttatggtaata 3097789  T
Q  141 attcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||| ||||||||| |||||||||||||| |    ||||||||||||||||| ||||    
T  3097790 atttccttttatggtatgcttaaccagtac---ggggacaccggttagcaggaccc 3097842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 20 - 153
Target Start/End: Complemental strand, 17333457 - 17333325
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  17333457 aaccggtgccccc-gggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattcataataaagtcaaaaa 17333359  T
Q  120 cagtttccttttatgataataattcccttttatg 153  Q
    ||||||||||||||||||||| ||||||||||||    
T  17333358 cagtttccttttatgataatacttcccttttatg 17333325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 24178631 - 24178470
Alignment:
Q  28 cccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcc 127  Q
    ||||| |||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||| | |||||| |||||||||||||||| ||||||||    
T  24178631 cccccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatctataataaagtcaaaagcagtttcc 24178532  T
Q  128 ttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagc 189  Q
    ||||||| |||||||| | ||||||| |||||||||||||||| |  ||| |||||||||||    
T  24178531 ttttatggtaataatttcattttatggtatgcttaaccagtgccccgggggcaccggttagc 24178470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 20 - 200
Target Start/End: Original strand, 41730315 - 41730498
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagt---taatgcattgaaattgtattattaatttataataaagtcaa 116  Q
    ||||||| ||||  |||||| ||||||| |||| ||||| ||||||||| ||||||   ||||||||||||||||| | |||||||||||||||||||||    
T  41730315 aaccggtgccccaggggcacgggttaagaatatgaaaaaagaaattatatagtagtaattaatgcattgaaattgtttaattaatttataataaagtcaa 41730414  T
Q  117 aaacagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccatta 200  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||| | ||   ||| ||||||||| ||||||||    
T  41730415 aaacagtttccttttatgataataattcccttttatggtatgcttaacaagtgccccagaagcactggttagcaggacccatta 41730498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 18 - 189
Target Start/End: Complemental strand, 3784891 - 3784720
Alignment:
Q  18 caaaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaa 117  Q
    |||| |||| ||||||| |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  3784891 caaatcggtgcccccagtgcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaa 3784792  T
Q  118 aacagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagc 189  Q
    |||| ||| |||||||| |||||||| ||||||||| ||||||||||| |||  |  ||| |||||||||||    
T  3784791 aacaattttcttttatggtaataatttccttttatggtatgcttaacccgtgtcccgggggcaccggttagc 3784720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 35985774 - 35985647
Alignment:
Q  43 ttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataat 142  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||| |||||||    
T  35985774 ttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtgaaaaacagtttccttttatggtaataat 35985675  T
Q  143 tcccttttatgatatgcttaaccagtgc 170  Q
    |||| |||||  ||| ||||||||||||    
T  35985674 tcccatttatagtatacttaaccagtgc 35985647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 35 - 169
Target Start/End: Complemental strand, 36446485 - 36446352
Alignment:
Q  35 ggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatg 134  Q
    ||||| ||||||| ||||||||| |||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||     
T  36446485 ggcactggttaagaatataaaaa-ggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttata 36446387  T
Q  135 ataataattcccttttatgatatgcttaaccagtg 169  Q
     |||||||||||||||||| |||| ||||||||||    
T  36446386 gtaataattcccttttatggtatgtttaaccagtg 36446352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 20 - 170
Target Start/End: Complemental strand, 51368961 - 51368811
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    |||||||||| |||||| || |||||||| ||| ||||||||||||||| ||||||||||||||||||||||| |  |||||||||||||| ||||||||    
T  51368961 aaccggtacctccagggtactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtagttaatttataataatgtcaaaaa 51368862  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgc 170  Q
     |||||||||||||  |||||||||| ||||||| ||||||||||||||||    
T  51368861 tagtttccttttatagtaataattccattttatggtatgcttaaccagtgc 51368811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 41 - 169
Target Start/End: Complemental strand, 8473069 - 8472941
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||||||||||||||||||| | ||||||||||||| ||||||| | ||||||||||||||||||||||||||||||| |||||| ||||||    
T  8473069 ggttaaggatataaaaaaggaaattatataatagttaatgcattaaaattgtgtaattaatttataataaagtcaaaaacagtttcattttataataata 8472970  T
Q  141 attcccttttatgatatgcttaaccagtg 169  Q
    |||| |||||||| ||| |||||||||||    
T  8472969 attctcttttatggtatacttaaccagtg 8472941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 14350453 - 14350279
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| | ||||||||||||| ||| |||||||||||||||  |||||||||||||| ||||||| | ||||||||||||||| ||||||||    
T  14350453 aaccggtgcccccggagcaccggttaagggtatgaaaaaggaaattatattgtagttaatgcattaaaattgtgtaattaatttataataatgtcaaaaa 14350354  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    || |||||||||||| ||||||||||| || ||| |||||||||||||||| |  ||| ||||||||||||| ||||    
T  14350353 caatttccttttatggtaataattccc-ttaatggtatgcttaaccagtgc-cccggggcaccggttagcaggaccc 14350279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 41 - 197
Target Start/End: Original strand, 48071513 - 48071668
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    ||||||||||||  |||||||||||||| | ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||    
T  48071513 ggttaaggatatgtaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaata 48071612  T
Q  141 attcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccca 197  Q
    |||  |||||||  ||||||||||| |||||| | | |||||||| ||||| |||||    
T  48071613 attatcttttatagtatgcttaaccggtgctcca-gaacaccggtcagcaggaccca 48071668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 41 - 196
Target Start/End: Complemental strand, 45449399 - 45449244
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||| |||||||||||| |||||||| ||||||||||||||| |||| || | ||||| ||||||||||||||||| ||||||||||||||| |||||    
T  45449399 ggttaaagatataaaaaagaaaattatatagtagttaatgcattaaaatagtgtaattaaattataataaagtcaaaagcagtttccttttatggtaata 45449300  T
Q  141 attcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||| ||||||||| |||| ||||||||||| | |||| || |||||||||| ||||    
T  45449299 attgccttttatggtatgtttaaccagtgccccaggggcatcggttagcaggaccc 45449244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 43 - 196
Target Start/End: Complemental strand, 50128325 - 50128172
Alignment:
Q  43 ttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataat 142  Q
    |||||||||| |||||| |||||| | ||||||||||||||||||||||| | |||||||||||||||||| |||| ||||||| ||||||| |||||||    
T  50128325 ttaaggatatgaaaaagaaaattacatagtagttaatgcattgaaattgtgtaattaatttataataaagttaaaagcagtttcattttatggtaataat 50128226  T
Q  143 tcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    || |||||||| |||||||||||||||  | ||  |||||||||||||| ||||    
T  50128225 tctcttttatggtatgcttaaccagtgtcccagaaacaccggttagcaggaccc 50128172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 41 - 198
Target Start/End: Complemental strand, 23473619 - 23473462
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| |||||||| |||||| || |||||||| ||||||||||||| ||||||||||||||||||  ||| ||||||||||||||| |||||    
T  23473619 ggttaaggatatgaaaaaggagattatatagcagttaatgtattgaaattgtataattaatttataataaagtttaaagcagtttccttttatggtaata 23473520  T
Q  141 attcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
    ||| | |||||| |||||||||||| ||||||   ||  |||||||||||| ||||||    
T  23473519 atttctttttataatatgcttaacctgtgctccgagggtaccggttagcaggacccat 23473462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 41 - 158
Target Start/End: Original strand, 38335200 - 38335317
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||| ||||| ||||||||||||||| |||| ||||||||||| |||||| | |||||||||||||||||||||||||||||| ||||||||||||||    
T  38335200 ggttaaagatatgaaaaaggaaattatatagtaattaatgcattgtaattgtgtaattaatttataataaagtcaaaaacagttttcttttatgataata 38335299  T
Q  141 attcccttttatgatatg 158  Q
    |||| |||||||| ||||    
T  38335300 attcacttttatggtatg 38335317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 41 - 169
Target Start/End: Original strand, 43286753 - 43286881
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| ||||||||||||||| | |||||||||  |||||||| | | |||||||||||||||||||||||| |||||||||||||  |||||    
T  43286753 ggttaaggatatgaaaaaggaaattatataatagttaatgttttgaaattatgtaattaatttataataaagtcaaaaatagtttccttttatagtaata 43286852  T
Q  141 attcccttttatgatatgcttaaccagtg 169  Q
    |||| |||||||| |||||||||||||||    
T  43286853 attctcttttatggtatgcttaaccagtg 43286881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 47532824 - 47532701
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||||||| | ||||||  |||||||||||||||| | ||||||||||| |||||||    
T  47532824 gttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatg-ataataaagtcaaaaataatttccttttataataataa 47532726  T
Q  142 ttcccttttatgatatgcttaacca 166  Q
    |||||||||||| ||||||||||||    
T  47532725 ttcccttttatggtatgcttaacca 47532701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 38702109 - 38701937
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| | ||| |||||| |||||||| ||| |||||||||| |||| ||||||||||||||||||||| | | ||||||||||||||| ||||||||    
T  38702109 aaccggtgctcccggggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaattatgtaattaatttataataatgtcaaaaa 38702010  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||||| |||||||| |||||||||    ||||| |||||||||||||||| |   || ||||||||||||| ||||    
T  38702009 cagttttcttttatggtaataattc----ttatggtatgcttaaccagtgccccgagggcaccggttagcaggaccc 38701937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 54 - 172
Target Start/End: Original strand, 12306962 - 12307079
Alignment:
Q  54 aaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatg 153  Q
    |||||| ||||||||  ||||||||| |||||||||||| | ||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  12306962 aaaaagaaaattatat-gtagttaatacattgaaattgtgtaattaatttataataaagtcaaaaacagattccttttatggtaataattctcttttatg 12307060  T
Q  154 atatgcttaaccagtgctc 172  Q
     ||||||||||||||||||    
T  12307061 gtatgcttaaccagtgctc 12307079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 29210423 - 29210537
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| || || |||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  29210423 aaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 29210522  T
Q  120 cagtttccttttatg 134  Q
    |||||||||||||||    
T  29210523 cagtttccttttatg 29210537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 20 - 168
Target Start/End: Original strand, 30657618 - 30657760
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| | ||| ||||||  |||||| |||| ||||| ||||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  30657618 aaccggtgctcccggggcactagttaagcatatgaaaaaagaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaa 30657717  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagt 168  Q
    |||      ||||||||||||||||||||||||| ||||||||||||||    
T  30657718 cag------tttatgataataattcccttttatggtatgcttaaccagt 30657760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 20 - 197
Target Start/End: Complemental strand, 48383287 - 48383110
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| | ||| |||||| |||||||||| | |||||| ||||||||    |||||||| ||||||||  | | ||||||| ||||||||||||||||    
T  48383287 aaccggtgctcccggggcactggttaaggatgtgaaaaagaaaattatatgaaagttaatgtattgaaataatgtaattaattgataataaagtcaaaaa 48383188  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccca 197  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||| |||   |||| ||| ||||||||| |||||    
T  48383187 cagtttccttttatggtaataattcccttttatggtatgcttaaccaatgcctcaggggcactggttagcaggaccca 48383110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 61 - 190
Target Start/End: Original strand, 52431632 - 52431761
Alignment:
Q  61 aaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa-ttcccttttatgatatgc 159  Q
    |||||||| ||||||||||||||||||||||| | |||||||||||| || ||||||| || ||| |||||||| |||||| |||| |||| || |||||    
T  52431632 aaattatatagtagttaatgcattgaaattgtgtaattaatttataa-aatgtcaaaagcaattttcttttatggtaataatttcctttttttggtatgc 52431730  T
Q  160 ttaaccagtgctctagggacaccggttagca 190  Q
    ||||||||||| | |||||||||||||||||    
T  52431731 ttaaccagtgccccagggacaccggttagca 52431761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 34 - 164
Target Start/End: Original strand, 30217784 - 30217916
Alignment:
Q  34 gggcaccggttaaggatat--aaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcctttt 131  Q
    |||||| || |||||||||  |||||||| ||||| | ||||||||||||||| ||||| | | |||||||||||||||||||||||| ||||| |||||    
T  30217784 gggcactggctaaggatatgaaaaaaagggaattagagagtagttaatgcatttaaattatttaattaatttataataaagtcaaaaatagttttctttt 30217883  T
Q  132 atgataataattcccttttatgatatgcttaac 164  Q
    ||| |||||||| | ||||||| ||||||||||    
T  30217884 atggtaataatttctttttatggtatgcttaac 30217916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 41 - 169
Target Start/End: Complemental strand, 35700805 - 35700679
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||  |||||||||||||||||||||||||| |||||||||||| | |||||||||||| ||||||||||| |  ||  |||||||||||||    
T  35700805 ggttaaggatactaaaaaggaaattatacagtagttaatacattgaaattgtgtaattaatttataa-aaagtcaaaaaaaaattt-ttttatgataata 35700708  T
Q  141 attcccttttatgatatgcttaaccagtg 169  Q
    | | |||||| |||||| |||||||||||    
T  35700707 acttccttttttgatatccttaaccagtg 35700679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 37315409 - 37315291
Alignment:
Q  54 aaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatg 153  Q
    ||||||||||||||| ||||||||||||||||||||| | | |||||||||||| ||||||||| ||||||| |||||||| |||||||| | |||| ||    
T  37315409 aaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataa-aaagtcaaagacagttttcttttatgctaataatttctttttttg 37315311  T
Q  154 atatgcttaaccagtgctct 173  Q
     |||||||||| | ||||||    
T  37315310 gtatgcttaacaaatgctct 37315291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 41 - 196
Target Start/End: Complemental strand, 15282669 - 15282519
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| |||||| |||||||| ||||||||||  ||||||||||| | |||||||||||||||||||||||| |       ||||||||||||    
T  15282669 ggttaaggatatgaaaaagaaaattatatagtagttaatatattgaaattgtgtaattaatttataataaagtcaaaaaaa----taatttatgataata 15282574  T
Q  141 attcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||| ||||  ||||||||| |||||| || |  |||||||||||||||||||    
T  15282573 attccctattattgtatgcttaa-cagtgccctggaaacaccggttagcagaaccc 15282519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 105 - 198
Target Start/End: Complemental strand, 19010778 - 19010685
Alignment:
Q  105 taataaagtcaaaaacagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||| |||| ||||||||||| | ||| ||||||||||| || ||||||    
T  19010778 taataaagtcaaaaatagtttccttttatggtaataattcccttttatggtatgattaaccagtgccccaggaacaccggttagtaggacccat 19010685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 41 - 165
Target Start/End: Original strand, 52749633 - 52749757
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||| ||||| ||||||||||||||| | ||||||||| |||||||||||||  | |||||| |||||||| ||||||| |||  ||||||| |||||    
T  52749633 ggttaaagatatgaaaaaggaaattatataatagttaatgtattgaaattgtatactaaatttacaataaagttaaaaacaatttttttttatggtaata 52749732  T
Q  141 attcccttttatgatatgcttaacc 165  Q
    ||||| ||||||| |||| ||||||    
T  52749733 attcctttttatggtatgtttaacc 52749757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 43 - 133
Target Start/End: Original strand, 39497340 - 39497430
Alignment:
Q  43 ttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||||||| |||||| |||||||| ||||||||||||||| ||||| ||| |||||||||||||||||||||||| | ||| |||||||    
T  39497340 ttaaggatatgaaaaagaaaattatatagtagttaatgcattaaaattatataattaatttataataaagtcaaaaataattttcttttat 39497430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 26228219 - 26228300
Alignment:
Q  36 gcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaa 117  Q
    |||| ||||||||| |||||||| ||||||||| ||||||||||||||||||||| | | |||||||||||||||| |||||    
T  26228219 gcactggttaaggagataaaaaatgaaattatatagtagttaatgcattgaaattatgtaattaatttataataaaatcaaa 26228300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 168
Target Start/End: Original strand, 39081825 - 39081958
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| ||||||| |||  ||||| ||||||||| | ||||||||| ||||||||| ||| |||||||||||| ||  | |||| ||||||| ||||||    
T  39081825 gggcactggttaagcatactaaaaatgaaattatatactagttaatgtattgaaattttataattaatttataa-aatattaaaagcagtttcattttat 39081923  T
Q  134 gataataattcccttttatgatatgcttaaccagt 168  Q
    ||||||||||  ||||| | |||||||||| ||||    
T  39081924 gataataattttcttttttaatatgcttaatcagt 39081958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 39912441 - 39912363
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaag 112  Q
    |||||| | ||||||||||||||| |||||||||| | ||||||||||||||||||||| | |||||||||||| ||||    
T  39912441 gggcactgattaaggatataaaaagggaaattatatactagttaatgcattgaaattgtgtgattaatttataaaaaag 39912363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 28726082 - 28725894
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggat-ataaaaaaggaaattatacagtagttaatgcattg-aaattgtattattaatttataataaagtcaaa 117  Q
    ||||||| ||||| |||||| |||||||||| ||||||||||||||||||   || ||| ||||||| ||||||| | ||||||  ||||  |||||||     
T  28726082 aaccggtgcccccggggcactggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaac 28725983  T
Q  118 aacagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccattagttaatt 207  Q
    || |  ||||||||||| ||| |||| |||||| |  |||||||||||||||| |  ||||||||||||||||  |||||| | ||||||    
T  28725982 aa-aacttccttttatggtaagaatttccttttttcgtatgcttaaccagtgccccggggacaccggttagcaagacccataaattaatt 28725894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 56 - 143
Target Start/End: Original strand, 37503260 - 37503346
Alignment:
Q  56 aaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataatt 143  Q
    ||||||||||||| |||||||||| |||||||||||| | |||||||||||| ||| ||||||| | |||||||||||| ||| ||||    
T  37503260 aaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataa-aaaatcaaaaatattttccttttatggtaacaatt 37503346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 14881086 - 14881036
Alignment:
Q  89 ttgtattattaatttataataaagtcaaaaacagtttccttttatgataat 139  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  14881086 ttgtataattaatttataataaagtcaaaaacagtttccttttatggtaat 14881036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 28481875 - 28481954
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagttt 125  Q
    |||||||||||| ||||||||||||||||||    ||||||||| ||||||| | |||||||||||||||| | |||||||||||    
T  28481875 ggttaaggatatgaaaaaggaaattatacag----taatgcattaaaattgtgtaattaatttataataaaat-aaaaacagttt 28481954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 33644495 - 33644341
Alignment:
Q  36 gcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaa-ttgtattattaatttataataaagtcaaaaacagtttccttttatg 134  Q
    |||| |||||||| |||||||||| |||||||| | || ||| |||||||||| |||| | ||||||| ||||  | ||||  || ||||||||||||||    
T  33644495 gcacaggttaaggctataaaaaagaaaattatataataattattgcattgaaaattgtgtaattaattcataaatatgtcatcaa-agtttccttttatg 33644397  T
Q  135 ataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
    |||||||   | |||| |  ||||||||| | ||||||||||| ||||||||||||    
T  33644396 ataataaactcttttttttgtatgcttaatcggtgctctaggggcaccggttagca 33644341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 19011158 - 19011108
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcatt 84  Q
    |||||| |||||||||||| ||||||||||||||| |||||||||||||||    
T  19011158 gggcacgggttaaggatatgaaaaaggaaattatatagtagttaatgcatt 19011108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 3838932 - 3838824
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    ||||||| |||  ||||||||||||||| | ||||||||||||| ||||||| | |||||||||||| || ||||||| || |||  |||||||  ||||    
T  3838932 ggttaagcatactaaaaaggaaattatataatagttaatgcattaaaattgtgtaattaatttataa-aatgtcaaaagcaatttttttttatggcaata 3838834  T
Q  141 attccctttt 150  Q
    ||| ||||||    
T  3838833 atttcctttt 3838824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 10976056 - 10976008
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaatt 90  Q
    ||||||||||| |||||||| |||||| ||||||||||||||| |||||    
T  10976056 gttaaggatatgaaaaaggagattatatagtagttaatgcattaaaatt 10976008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 26228304 - 26228358
Alignment:
Q  136 taataattcccttttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
    |||||||||||||||||| ||||||||||  || |||  ||||||||||||||||    
T  26228304 taataattcccttttatggtatgcttaactggtactccggggacaccggttagca 26228358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 19011093 - 19011057
Alignment:
Q  70 agtagttaatgcattgaaattgtattattaatttata 106  Q
    ||||||||||||||||||||||| | |||||||||||    
T  19011093 agtagttaatgcattgaaattgtgtaattaatttata 19011057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 52702322 - 52702175
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggata-taaaaaaggaaattatacagtagttaatgcattgaaa-ttgtattattaatttataataaagtcaaa 117  Q
    ||||||| | ||| |||||| ||||||||||| |||||| ||||||||||   || ||| |||||||||| |||| | ||||||  ||||  ||||||||    
T  52702322 aaccggtgctcccggggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaaa 52702223  T
Q  118 aacagtttccttttatgataataattcccttttatgatatgcttaacca 166  Q
    || | || | ||||||| |||||||| |||||| |  ||||||||||||    
T  52702222 aaaactt-cattttatggtaataatttcctttttttgtatgcttaacca 52702175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 1e-66; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 31438656 - 31438832
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| | ||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  31438656 aaccggtgctcccggggcactggttaaggatatgaaaaaggaaattatacagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaa 31438755  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |  ||||||||||||||||| ||||    
T  31438756 cagtttccttttatgataataattcccttttatggtatgcttaaccagtgccccggggacaccggttagcaggaccc 31438832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 44587912 - 44588088
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| | |||||||||||||||||| |||||    
T  44587912 aaccggtgcccccggggcaccggttaaggatataaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataataaagtaaaaaa 44588011  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| |||||||||||||||||| |||||||||| ||||| |  |||  |||||||||||| ||||    
T  44588012 cagtttccttttatggtaataattcccttttatggtatgcttaacaagtgccccgggggtaccggttagcaggaccc 44588088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 20552941 - 20553117
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||  |||||| |||||||||||| ||||||||||||||| |||| |||||||||||||||||| | ||||||| ||||||||||||||||    
T  20552941 aaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaattgataataaagtcaaaaa 20553040  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||| |  ||| ||||||||||||| ||||    
T  20553041 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 20553117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 30486228 - 30486397
Alignment:
Q  28 cccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcc 127  Q
    ||||| |||||| |||||||||||| ||||||||||||||| ||||||||||| ||||||||||| | |||||  |||||||||||||||||||||||||    
T  30486228 cccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaaactataataaagtcaaaaacagtttcc 30486327  T
Q  128 ttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccca 197  Q
    ||||||| |||||||||||||||||| |||||||||||||||| |  ||| ||||||||||||| |||||    
T  30486328 ttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccca 30486397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 1859193 - 1859342
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||| | | |||||||||||||||||||||||||||||| |||||||| |||||    
T  1859193 ggttaaggatataaaaaaagaaattgtatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagttttcttttatggtaata 1859292  T
Q  141 attcccttttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
    |||| |||||||| |||||||||||||||| ||||| |||||||||||||    
T  1859293 attctcttttatggtatgcttaaccagtgccctaggaacaccggttagca 1859342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 20 - 169
Target Start/End: Original strand, 32860112 - 32860260
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||  |||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||| | ||||||||||||||||||||||||    
T  32860112 aaccggtgccccgggggcacgggttaaggatataaaaaaggaaattatatagtatttaatgcattgaaattgtgtaattaatttataataaagtcaaaaa 32860211  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtg 169  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  32860212 cagtttccttttatg-taataattctcttttatggtatgcttaaccagtg 32860260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 20 - 168
Target Start/End: Complemental strand, 561694 - 561546
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||     
T  561694 aaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaat 561595  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagt 168  Q
    |||||||||||||| |||||||||| |||||||| ||||||||| ||||    
T  561594 cagtttccttttataataataattctcttttatggtatgcttaatcagt 561546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 28 - 196
Target Start/End: Complemental strand, 22068487 - 22068320
Alignment:
Q  28 cccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcc 127  Q
    ||||| |||||| |||||||||||| ||||||| ||||||| |||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  22068487 cccccggggcactggttaaggatatgaaaaagggaattatatagtagtta-tgcattgaaattgtataattaattgataataaagtcaaaaacagtttcc 22068389  T
Q  128 ttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||| |||||||||||||||||| |||||||||||||||| |  ||| ||||| ||||||| ||||    
T  22068388 ttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccgattagcaggaccc 22068320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 42 - 198
Target Start/End: Original strand, 31390044 - 31390200
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    ||||||||||| ||||||||||||||| ||||||||||| ||||||||| | | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  31390044 gttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattatgtaattaatttataataaagtcaaaaacagtttccttttatggtaataa 31390143  T
Q  142 ttcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
    |||||||||||| ||||||||||| ||||||  ||| ||||| ||||||| ||||||    
T  31390144 ttcccttttatggtatgcttaacccgtgctccgggggcaccgattagcaggacccat 31390200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 20 - 170
Target Start/End: Original strand, 4381805 - 4381955
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| | |||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  4381805 aaccggtgcccccggtgcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 4381904  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgc 170  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||||||    
T  4381905 cagtttccttttatggtaataattccattttatggtatgcttaaccagtgc 4381955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 26387218 - 26387064
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||| ||| |||||||| ||||||    
T  26387218 gttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataa 26387119  T
Q  142 ttcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||||||||||| ||||||||||||||||  | ||| ||||||||| ||| ||||    
T  26387118 ttcccttttatggtatgcttaaccagtgccttgggggcaccggttaacaggaccc 26387064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 20 - 197
Target Start/End: Complemental strand, 32361045 - 32360868
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||||| | |||||| |||||||| | ||||||||||||||||||  ||| ||||||| ||||||||||||||||    
T  32361045 aaccggtgcccccggggcactggttaaggatgtgaaaaagaaaattatataatagttaatgcattgaaataatataattaattgataataaagtcaaaaa 32360946  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccca 197  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||| ||| |  ||| ||||||||||||| |||||    
T  32360945 cagtttccttttatggtaataattcccttttatggtatgcttaaccaatgccccgggggcaccggttagcaggaccca 32360868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 27856572 - 27856396
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||  ||| ||||||||||||||| | ||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  27856572 aaccggtgcccccggggcactggttaagagtatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 27856473  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||||| |  ||| || |||||||||| ||||    
T  27856472 cagtttccttttatggtaataatttccttttatggtatgcttaaccagtgccccgggggcatcggttagcaggaccc 27856396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 41 - 196
Target Start/End: Original strand, 22567633 - 22567788
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| ||||| ||||||||| ||||||||||| ||||||||||| | |||||||||||||||||||||||| | |||||||||||| |||||    
T  22567633 ggttaaggatatgaaaaaagaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttccttttatggtaata 22567732  T
Q  141 attcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||| |||||||| ||||||||||| |||||| |||| ||||||||||||| ||||    
T  22567733 attctcttttatggtatgcttaacccgtgctccaggggcaccggttagcaggaccc 22567788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 41 - 200
Target Start/End: Original strand, 22887781 - 22887940
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||||||| | | |||||||||||||||||| |||||||||||||||||||| |||||    
T  22887781 ggttaaggatatgaaaaaagaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagttaaaaacagtttccttttatggtaata 22887880  T
Q  141 attcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccatta 200  Q
    |||| |||||||| ||||||||||||||||||  ||| ||||| ||||||  ||||||||    
T  22887881 attctcttttatggtatgcttaaccagtgctccgggggcaccgattagcatgacccatta 22887940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 34442699 - 34442558
Alignment:
Q  29 ccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcct 128  Q
    |||| ||||||  ||||||||||| |||||| | |||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||    
T  34442699 ccccggggcacatgttaaggatatgaaaaagaagattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttct 34442600  T
Q  129 tttatgataataattcccttttatgatatgcttaaccagtgc 170  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  34442599 tttatggtaataattcccttttatggtatgcttaaccagtgc 34442558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 34 - 170
Target Start/End: Original strand, 6580213 - 6580349
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| |||||||| ||| |||||||||| |||| ||||||||||||||||||||| | | ||||||||||||||| ||||||||||||||||||||||    
T  6580213 gggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttat 6580312  T
Q  134 gataataattcccttttatgatatgcttaaccagtgc 170  Q
    | |||||||||||||||||| ||||||||||||||||    
T  6580313 ggtaataattcccttttatggtatgcttaaccagtgc 6580349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 28600991 - 28601152
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| |||||||||||| ||||||| ||||||| |||||||| |||||||||||||||| ||||||| |||||||||| |||||||||||| ||||||    
T  28600991 gggcactggttaaggatatgaaaaagggaattataaagtagtta-tgcattgaaattgtataattaattgataataaagttaaaaacagtttctttttat 28601089  T
Q  134 gataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    | ||||||||| |||||||| |||||||||||||||| || ||  ||||||||||||| ||||    
T  28601090 ggtaataattctcttttatggtatgcttaaccagtgcactgggagcaccggttagcaggaccc 28601152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 34 - 166
Target Start/End: Complemental strand, 38591036 - 38590904
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| ||||||| |||| ||||||||||||||||||||||||||| ||| ||||||| | ||||||| |||||||||||||||||||||| |||||||    
T  38591036 gggcactggttaagaatatgaaaaaggaaattatacagtagttaatgtattaaaattgtgtaattaattgataataaagtcaaaaacagttttcttttat 38590937  T
Q  134 gataataattcccttttatgatatgcttaacca 166  Q
    | |||||||||||||||||| ||||||||||||    
T  38590936 ggtaataattcccttttatggtatgcttaacca 38590904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 8969561 - 8969407
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    ||||||||||| |||||| |||||||| |||||||||||||||||||| || | ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  8969561 gttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaatagtgtaattaatttataataaagtcaaaagcagtttccttttatggtaataa 8969462  T
Q  142 ttcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    || ||||||||  |||||||||| ||||| |  ||| ||||||||||||| ||||    
T  8969461 tttccttttatagtatgcttaactagtgcccctggggcaccggttagcagtaccc 8969407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 25782984 - 25782833
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    |||||| |||| |||||||||||||||   ||||||||||||||||||||| | |||| ||||||||||||||||||||| ||| |||||||||||||||    
T  25782984 gttaagaatatgaaaaaggaaattata---tagttaatgcattgaaattgtgtaattattttataataaagtcaaaaacaattttcttttatgataataa 25782888  T
Q  142 ttcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||||||||||| |||||||||||||||  |  |||||| |||||||| ||||||    
T  25782887 ttcccttttatggtatgcttaaccagtgtcccggggacatcggttagccgaaccc 25782833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 34 - 196
Target Start/End: Complemental strand, 35851913 - 35851750
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    ||||||||||||||||| | ||||||||||||||| | ||||||||||||||||||  | | ||||||| ||||||||||||||||||||||| ||||||    
T  35851913 gggcaccggttaaggatgtgaaaaaggaaattatataatagttaatgcattgaaataatgtaattaattgataataaagtcaaaaacagtttcattttat 35851814  T
Q  134 gataataattcccttttatgatatgcttaaccagtg-ctctagggacaccggttagcagaaccc 196  Q
    | ||||||||| |||||||| |||||||||||| || |||  ||| ||||||||||||| ||||    
T  35851813 ggtaataattctcttttatggtatgcttaaccaatgcctcggggggcaccggttagcaggaccc 35851750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 20 - 170
Target Start/End: Complemental strand, 3668288 - 3668139
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| || ||| |||||||| |||  |||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  3668288 aaccggtgccccc-ggacactggttaagggtatggaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 3668190  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgc 170  Q
    ||||||||||||||| |||||||| ||||||||  |||| |||||||||||    
T  3668189 cagtttccttttatggtaataatttccttttatagtatgtttaaccagtgc 3668139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 41 - 169
Target Start/End: Original strand, 2898102 - 2898230
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| |||||| |||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||| ||| ||||||    
T  2898102 ggttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttctatcataata 2898201  T
Q  141 attcccttttatgatatgcttaaccagtg 169  Q
    |||| |||||||| |||| |||| |||||    
T  2898202 attctcttttatggtatgtttaatcagtg 2898230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 42 - 170
Target Start/End: Complemental strand, 5093693 - 5093565
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    ||||||||||| ||||||||||||| | ||||||||||||||| ||||||| | ||||||||||||||||||||||| || |||||||||||||||||||    
T  5093693 gttaaggatatgaaaaaggaaattaaatagtagttaatgcattaaaattgtgtaattaatttataataaagtcaaaagcaatttccttttatgataataa 5093594  T
Q  142 ttcccttttatgatatgcttaaccagtgc 170  Q
    || ||||||||| |||| ||||| |||||    
T  5093593 tttccttttatggtatgtttaactagtgc 5093565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 41 - 191
Target Start/End: Complemental strand, 13574184 - 13574035
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| |||||||||| |||| |  | |||||| ||||||||||| | ||||||||||||||||||||||||||||||| ||||||| |||||    
T  13574184 ggttaaggatatgaaaaaggaaaatatataaaaattaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttctttttatggtaata 13574085  T
Q  141 attcccttttatgatatgcttaaccagtgctctagggacaccggttagcag 191  Q
    ||| ||||||||| ||||||||||| |||| |||  |||||||||||||||    
T  13574084 atttccttttatggtatgcttaacccgtgcccta-agacaccggttagcag 13574035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 43637195 - 43637343
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| || |||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||| |||| ||||||| |||||    
T  43637195 ggttaaggatatgaataaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaatttctttttatggtaata 43637294  T
Q  141 attcccttttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
    ||| |||||||   |||| |||||| ||||||  ||| ||||||||||||    
T  43637295 atttccttttacagtatgtttaacccgtgctc-cggggcaccggttagca 43637343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 43 - 191
Target Start/End: Complemental strand, 4022631 - 4022484
Alignment:
Q  43 ttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataat 142  Q
    ||||| |||| ||||| ||||||| | ||||||||||| ||||||||| | | |||||||||||||||||||| ||||||||||||||||||||||||||    
T  4022631 ttaagaatatgaaaaaagaaatta-atagtagttaatgtattgaaattctgtaattaatttataataaagtcagaaacagtttccttttatgataataat 4022533  T
Q  143 tcccttttatgatatgcttaaccagtgctctagggacaccggttagcag 191  Q
    | |||||||||||||| ||||||||||  |  ||| |||||||||||||    
T  4022532 ttccttttatgatatgtttaaccagtgtcccgggggcaccggttagcag 4022484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 34 - 170
Target Start/End: Original strand, 27584762 - 27584898
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    ||||| ||||||||||||| |||| |||||||||| ||||||||| ||||||||||||| | |||||||||||||||| |||||| ||||||||||||||    
T  27584762 gggcatcggttaaggatatgaaaagggaaattatatagtagttaaagcattgaaattgtgtaattaatttataataaaatcaaaagcagtttccttttat 27584861  T
Q  134 gataataattcccttttatgatatgcttaaccagtgc 170  Q
    | ||||||||| | || ||| ||| ||||||||||||    
T  27584862 ggtaataattctcattcatggtatacttaaccagtgc 27584898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 36 - 163
Target Start/End: Original strand, 5881243 - 5881374
Alignment:
Q  36 gcaccggttaaggatataaaaaaggaaattatacagtagttaatgc----attgaaattgtattattaatttataataaagtcaaaaacagtttcctttt 131  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||    ||||||||||| | ||||||| |||||||||||||||| |||||||||||    
T  5881243 gcacaggttaaggatatgaaaaaggaaattatatagtagttaatgcatgcattgaaattgtgtaattaattgataataaagtcaaaaagagtttcctttt 5881342  T
Q  132 atgataataattcccttttatgatatgcttaa 163  Q
    ||||||||||||  |||||||| |||||||||    
T  5881343 atgataataattatcttttatggtatgcttaa 5881374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 26891839 - 26891725
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| || ||| | |||||||||||||||||||||||||| | ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  26891839 aaccggtgcccccgggacactgattaaggatataaaaaaggaaattatatattagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaa 26891740  T
Q  120 cagtttccttttatg 134  Q
     ||||||||||||||    
T  26891739 tagtttccttttatg 26891725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 43 - 159
Target Start/End: Complemental strand, 11021375 - 11021259
Alignment:
Q  43 ttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataat 142  Q
    |||| ||||| ||||| |||||||||  |||||||||||||||||||||| | |||||| ||||||||||||||||||||||| ||||| || |||||||    
T  11021375 ttaaagatatgaaaaaagaaattatatggtagttaatgcattgaaattgtgtaattaatatataataaagtcaaaaacagttttcttttgtggtaataat 11021276  T
Q  143 tcccttttatgatatgc 159  Q
    ||||||||||| |||||    
T  11021275 tcccttttatggtatgc 11021259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 41 - 166
Target Start/End: Complemental strand, 29102438 - 29102313
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    ||||||| |||| |||||| |||||||| ||  |||||| |||||||||| ||| |||||||||||||||||||||||||||||| |||||||  |||||    
T  29102438 ggttaagaatatcaaaaagaaaattatatagcggttaatacattgaaattttataattaatttataataaagtcaaaaacagttttcttttatagtaata 29102339  T
Q  141 attcccttttatgatatgcttaacca 166  Q
    |||  ||||||||||||| |||||||    
T  29102338 attatcttttatgatatgtttaacca 29102313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 34 - 143
Target Start/End: Original strand, 38296201 - 38296310
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| |||||| ||||| |||||| |||||||| |||| ||||| |||||||||||| | ||||||||||||||||||||||||||||||| ||||||    
T  38296201 gggcactggttaaagatatgaaaaagaaaattatatagtaattaatacattgaaattgtgtaattaatttataataaagtcaaaaacagtttctttttat 38296300  T
Q  134 gataataatt 143  Q
    | ||||||||    
T  38296301 ggtaataatt 38296310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 25772142 - 25772269
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacag-tagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||| |||| ||||||||||||||| |  || |||||||| ||||||||| | |||||||||||||||||||||||| | ||||| ||||||||||||    
T  25772142 gttaagaatatgaaaaaggaaattataaaaataattaatgcaatgaaattgtgtaattaatttataataaagtcaaaaataatttccctttatgataata 25772241  T
Q  141 attcccttttatgatatgcttaaccagt 168  Q
    ||||||||||||| ||| ||||| ||||    
T  25772242 attcccttttatggtatacttaatcagt 25772269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 15079100 - 15079012
Alignment:
Q  54 aaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataatt 143  Q
    ||||||||||||||| ||||||||||| ||||||||||| | |||||||||||| ||||||||||||| |||||||||||||||||||||    
T  15079100 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa-aaagtcaaaaacaatttccttttatgataataatt 15079012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 54 - 169
Target Start/End: Original strand, 39531868 - 39531981
Alignment:
Q  54 aaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatg 153  Q
    ||||||||||||||| ||||||||||||||||||||||| | |||||||||||| | |||||||| |||||| |||||||| |||| |||  |||||  |    
T  39531868 aaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa-agagtcaaaaccagttttcttttatggtaat-attttctttttcg 39531965  T
Q  154 atatgcttaaccagtg 169  Q
    ||||||||||||||||    
T  39531966 atatgcttaaccagtg 39531981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 168
Target Start/End: Original strand, 15146683 - 15146789
Alignment:
Q  61 aaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatgatatgct 160  Q
    |||||||| | |||||||| |||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||||||||  | ||| || |||| |    
T  15146683 aaattatataatagttaatacattgaaattgtataattaatttataa-aaagtcaaaaataatttccttttatgataataattttcctttttggtatgtt 15146781  T
Q  161 taaccagt 168  Q
    ||||||||    
T  15146782 taaccagt 15146789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 54 - 164
Target Start/End: Complemental strand, 34123166 - 34123057
Alignment:
Q  54 aaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatg 153  Q
    ||||| ||||||||| | |||||||||| ||||| |||| | |||||||||||| |||||||||||||||||||||||||| | ||||||  ||||| |     
T  34123166 aaaaaagaaattatataatagttaatgctttgaatttgtgtaattaatttataa-aaagtcaaaaacagtttccttttatggtcataattttctttttta 34123068  T
Q  154 atatgcttaac 164  Q
    |||||||||||    
T  34123067 atatgcttaac 34123057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 16368061 - 16367995
Alignment:
Q  219 caagcatcttaactaacttggttggttagttacttgcacttcaagtaacttaaccaaacctaactaa 285  Q
    ||||||||||||||||||||||| ||||||| ||| | || |||||||||||||||| |||||||||    
T  16368061 caagcatcttaactaacttggttcgttagttgcttacgctgcaagtaacttaaccaatcctaactaa 16367995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 10820528 - 10820615
Alignment:
Q  54 aaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataatt 143  Q
    ||||| ||||||||| | |||||||| |||||| ||||| | |||||||||||| ||||| |||||||||||||||||||| ||||||||    
T  10820528 aaaaaagaaattataaaatagttaatacattgagattgt-taattaatttataa-aaagttaaaaacagtttccttttatggtaataatt 10820615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 30217719 - 30217667
Alignment:
Q  41 ggttaaggata-taaaaaaggaaattatacagtagttaatgcattgaaattgt 92  Q
    ||||||||||| |||||||| |||||||| |||| ||| ||||||||||||||    
T  30217719 ggttaaggatactaaaaaagaaaattatatagtatttattgcattgaaattgt 30217667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 43993180 - 43993212
Alignment:
Q  36 gcaccggttaaggatataaaaaaggaaattata 68  Q
    ||||||||||||||||| |||||||||||||||    
T  43993180 gcaccggttaaggatatgaaaaaggaaattata 43993212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 44854516 - 44854468
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattata 68  Q
    ||||||||| ||| |||||| |||||||||||  |||||||||||||||    
T  44854516 aaccggtactcccggggcactggttaaggataataaaaaggaaattata 44854468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 6e-63; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 32985371 - 32985193
Alignment:
Q  18 caaaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaa 117  Q
    ||||||||| ||| | |||||  |||||||||||||||||||||||||||| ||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  32985371 caaaccggtgccctcggggcattggttaaggatataaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaa 32985272  T
Q  118 aacagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |  ||| ||||||||||||||||||    
T  32985271 aacagtttccttttatgataataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcagaaccc 32985193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 43 - 197
Target Start/End: Complemental strand, 1391331 - 1391177
Alignment:
Q  43 ttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataat 142  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  1391331 ttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaaacagttttcttttatgataataat 1391232  T
Q  143 tcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccca 197  Q
    ||||||||||| ||||||||||||||| || ||| |||||||||||||| |||||    
T  1391231 tcccttttatggtatgcttaaccagtgttccaggaacaccggttagcaggaccca 1391177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 3515776 - 3515954
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| |||||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  3515776 aaccggtgcccccagggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 3515875  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||| |||| | |||| ||||||||||||| ||||||    
T  3515876 cagtttccttttatggtaataattcccttttatggtatgtttaacctgtgccccaggggcaccggttagcaggacccat 3515954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 12145293 - 12145115
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||||| ||||  ||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  12145293 aaccggtgcccccagtgcacttgttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaa 12145194  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||||||||||  | | ||||||||||||| ||||||    
T  12145193 cagtttccttttatgataataatttccttttatagtatgcttaaccagtgctccggaggcaccggttagcaggacccat 12145115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 20 - 200
Target Start/End: Complemental strand, 7851335 - 7851155
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| |||||||||||| |||||||||||| |||||| |||||||| |||| |||||||||| ||||||| | ||||||||||||||||||||||||    
T  7851335 aaccggtgcccccagggcactggttaaggatatgaaaaagaaaattatatagtaattaatgcattaaaattgtgtaattaatttataataaagtcaaaaa 7851236  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccatta 200  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||  |||| |||| ||||||||||||||  ||||||||    
T  7851235 cagtttccttttatggtaataattcccttttatggtatgcttaactcgtgccctagagacaccggttagcaacacccatta 7851155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 392106 - 392282
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  392106 aaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 392205  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||||||||| |  ||| ||||||||||||| ||||    
T  392206 cagtttccttttatggtaataattctcttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 392282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 2350662 - 2350832
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| | ||| |||||| |||||||||||| ||||||||||||||| ||||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  2350662 aaccggtgctcccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaa 2350761  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
     |||||||||||||| ||||||||||||||||||||||||||||||||| | |  | ||||||||||||||    
T  2350762 tagtttccttttatggtaataattcccttttatgatatgcttaaccagtaccccggagacaccggttagca 2350832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 34 - 170
Target Start/End: Complemental strand, 29451277 - 29451141
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||| |||||||||||||||| |||||||||||||||    
T  29451277 gggcaccggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaaattataataaagtcaaacacagtttccttttat 29451178  T
Q  134 gataataattcccttttatgatatgcttaaccagtgc 170  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  29451177 gataataattcccttttatggtatgcttaacccgtgc 29451141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 32929684 - 32929508
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||  |||||||| ||| ||||||||||||||| | || |||||||||||||||||| | ||||||||||||||||||||||||    
T  32929684 aaccggtgcccccggggcaatggttaagggtatgaaaaaggaaattatatattaattaatgcattgaaattgtgtaattaatttataataaagtcaaaaa 32929585  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||| |  ||| ||||||||||||| ||||    
T  32929584 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 32929508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 34 - 170
Target Start/End: Complemental strand, 26467286 - 26467150
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||    
T  26467286 gggcaccggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaatagtttccttttat 26467187  T
Q  134 gataataattcccttttatgatatgcttaaccagtgc 170  Q
    | |||||||||||||||||| ||||  ||||||||||    
T  26467186 ggtaataattcccttttatggtatgtctaaccagtgc 26467150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 4215705 - 4215881
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||  ||| ||||||||||||||| | ||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  4215705 aaccggtgcccccggggcactggttaagagtatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 4215804  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||||| |  ||| || |||||||||| ||||    
T  4215805 cagtttccttttatggtaataatttccttttatggtatgcttaaccagtgccccgggggcatcggttagcaggaccc 4215881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 29 - 196
Target Start/End: Complemental strand, 18276782 - 18276612
Alignment:
Q  29 ccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcct 128  Q
    |||| |||||| |||||||||||| ||||||||||||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||    
T  18276782 cccctgggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaatttgtgtaattaatttataataaagtcaaaaacagtttcct 18276683  T
Q  129 tttatgataataattcccttttatg---atatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||||| |||||||| |||||||||    |||||||||||||||| |  ||| ||||||||||||| ||||    
T  18276682 tttatggtaataatttccttttatggtattatgcttaaccagtgcccctggggcaccggttagcaggaccc 18276612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 23402162 - 23402324
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  23402162 gggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgaaattaatttataataaagtcaaaaacagtttccttttat 23402261  T
Q  134 gataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    | |||||||| ||||||||| ||||||||||| |||| |  | | ||||||||||||| ||||    
T  23402262 ggtaataattaccttttatggtatgcttaacccgtgccccggaggcaccggttagcaggaccc 23402324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 12525729 - 12525905
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| || || ||| || |||||||| ||| ||||||||||||||| |||||||||| |||||||| ||| | ||||||||||||||| |||||| |    
T  12525729 aaccggtgcctccggggtactggttaagggtatgaaaaaggaaattatatagtagttaatacattgaaaatgtgtaattaatttataataatgtcaaaca 12525828  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||| ||||| | ||||| |||||||||||| ||||    
T  12525829 cagtttcattttatggtaataattcccttttatgatatgcttaactagtgccccagggataccggttagcaggaccc 12525905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 41 - 196
Target Start/End: Complemental strand, 25165568 - 25165413
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| ||||| ||||||||| ||||||||||  ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||    
T  25165568 ggttaaggatatgaaaaaagaaattatatagtagttaatatattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatgataata 25165469  T
Q  141 attcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||| |||||| |||||||||||||| ||| || ||  ||||||||||||| ||||    
T  25165468 attctcttttacgatatgcttaaccaatgccctgggagcaccggttagcaggaccc 25165413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 1840407 - 1840253
Alignment:
Q  36 gcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatga 135  Q
    |||| |||||||||||||||||| ||||||||| | || |||||| ||| ||||||| | |||||||||||||||||| |||||||||||||||| |||     
T  1840407 gcactggttaaggatataaaaaaagaaattatataataattaatgtattaaaattgtgtaattaatttataataaagttaaaaacagtttcctttcatgg 1840308  T
Q  136 taataattcccttttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
    ||||||||||||||||||||||| ||||||||||| ||||  |||||||||||||    
T  1840307 taataattcccttttatgatatgtttaaccagtgccctagaaacaccggttagca 1840253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 41 - 166
Target Start/End: Original strand, 2580983 - 2581108
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||| | | |||||||||||||||||||||||| | |||||||||||| |||||    
T  2580983 ggttaatgatataaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaataatttccttttatggtaata 2581082  T
Q  141 attcccttttatgatatgcttaacca 166  Q
    ||||||||||||| ||||||||||||    
T  2581083 attcccttttatggtatgcttaacca 2581108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 34 - 169
Target Start/End: Complemental strand, 3026171 - 3026036
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||    
T  3026171 gggcactggttaagggtatgaaaaatgaaattatacagtagttaatgcattgaaattgtataattaatttataataatgtcaaaaacagttttcttttat 3026072  T
Q  134 gataataattcccttttatgatatgcttaaccagtg 169  Q
      ||||||||| |||||||| ||||||||| |||||    
T  3026071 cgtaataattctcttttatggtatgcttaatcagtg 3026036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 35 - 188
Target Start/End: Complemental strand, 11115256 - 11115106
Alignment:
Q  35 ggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatg 134  Q
    ||||| |||||||||||||||||||||||||||| | |||||||| |||||||||||| | |||||||||||||||  ||||||| ||||| ||||||||    
T  11115256 ggcactggttaaggatataaaaaaggaaattatataatagttaatacattgaaattgtgtaattaatttataataa--tcaaaaatagttttcttttatg 11115159  T
Q  135 ataataattcccttttatgatatgcttaaccagtgctctagggacaccggttag 188  Q
     ||||||||||||||||||||||| ||||||||||| |  ||||||||||||||    
T  11115158 gtaataattcccttttatgatatgtttaaccagtgc-cccgggacaccggttag 11115106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 27433502 - 27433672
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||| ||| ||||||||||||||| ||||||||||||||| ||||||| | |||||||||| |||| ||||||||    
T  27433502 aaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttatcataatgtcaaaaa 27433601  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
     |||||||||||||| |||||||||||||||||| |||| |||||| || | |  ||| ||||||||||||    
T  27433602 tagtttccttttatggtaataattcccttttatggtatgtttaacccgttccccgggggcaccggttagca 27433672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 21878523 - 21878353
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| || || |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  21878523 aaccggtgcctcccgggcacgggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattatttaattaatttataataaagtcaaaaa 21878424  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||| ||||||| ||||||||||||       |||| ||||||||||| | ||| |||||||||||||| ||||    
T  21878423 cagtttctttttatggtaataattccct------gtatgtttaaccagtgccccaggaacaccggttagcaggaccc 21878353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 35043921 - 35044049
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| ||||| ||||||||| |||||||||| |||||||||||| | |||||||||||||||||||||||||||||| |||||||| |||||    
T  35043921 ggttaaggatatgaaaaaagaaattatatagtagttaattcattgaaattgtgt-attaatttataataaagtcaaaaacagttttcttttatggtaata 35044019  T
Q  141 attcccttttatgatatgcttaaccagtgc 170  Q
    |||| |||||||| ||||||||||||||||    
T  35044020 attctcttttatggtatgcttaaccagtgc 35044049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 20 - 170
Target Start/End: Complemental strand, 13417138 - 13416985
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataa---agtcaa 116  Q
    ||||| ||||| ||||||||  ||||||||||| ||||||||||||||| | ||||||||| ||||||||||| | |||||||||||||||   ||||||    
T  13417138 aaccgataccctcagggcactagttaaggatatgaaaaaggaaattatatattagttaatgtattgaaattgtgtaattaatttataataataaagtcaa 13417039  T
Q  117 aaacagtttccttttatgataataattcccttttatgatatgcttaaccagtgc 170  Q
    ||||||||| |||||||| ||||||||| ||||||| |||||||||||||||||    
T  13417038 aaacagttttcttttatggtaataattctcttttataatatgcttaaccagtgc 13416985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 20897958 - 20898072
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| |||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||| |||||||||||| |||    
T  20897958 aaccggtgcccccagggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaa 20898057  T
Q  120 cagtttccttttatg 134  Q
    |||||||||||||||    
T  20898058 cagtttccttttatg 20898072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 42 - 196
Target Start/End: Original strand, 29978264 - 29978417
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    ||||||||||| ||||||||||||||| |||| |||||| ||||||||| | | ||  ||||||||||||||||||||||||||  ||||||| ||||||    
T  29978264 gttaaggatatgaaaaaggaaattatatagtatttaatgtattgaaattatgtaatatatttataataaagtcaaaaacagtttaattttatggtaataa 29978363  T
Q  142 ttcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||||||||||||||||||||||||| || || || |||||||||||||| ||||    
T  29978364 ttcccttttatgatatgcttaaccagcgccct-ggaacaccggttagcaggaccc 29978417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 34852003 - 34851849
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    ||||| ||||| ||||||||||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||| | |||||||||||  ||||||    
T  34852003 gttaaagatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattgatttataataaagtcaaaaataatttccttttatagtaataa 34851904  T
Q  142 ttcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||| ||||||| |||||||||||||||| ||  | ||||||| ||||||| ||||    
T  34851903 ttctcttttataatatgcttaaccagtgttccggtgacaccgattagcaggaccc 34851849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 34396703 - 34396596
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| |||||||| ||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  34396703 aaccggtgcccccaggacacaggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaa 34396604  T
Q  120 cagtttcc 127  Q
    ||||||||    
T  34396603 cagtttcc 34396596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 54 - 165
Target Start/End: Original strand, 961053 - 961164
Alignment:
Q  54 aaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatg 153  Q
    ||||||||||||||| ||||||||||||||| ||||||| | ||||||| |||||||||||| ||||| |||||||||||||||||||||| ||||||||    
T  961053 aaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaattgataataaagtcagaaacaatttccttttatgataataattctcttttatg 961152  T
Q  154 atatgcttaacc 165  Q
     |||||||||||    
T  961153 gtatgcttaacc 961164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 5323433 - 5323560
Alignment:
Q  43 ttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataat 142  Q
    ||||| |||||||||||||||||||| |||| |||| ||||| ||||| | | |||||||||||||||||||||||||| |||||||||||| |||||||    
T  5323433 ttaagaatataaaaaaggaaattatatagtaattaaagcattaaaattatgtaattaatttataataaagtcaaaaacaatttccttttatggtaataat 5323532  T
Q  143 tcccttttatgatatgcttaaccagtgc 170  Q
    ||||||||||| ||||| ||||| ||||    
T  5323533 tcccttttatggtatgcgtaaccggtgc 5323560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 35 - 168
Target Start/End: Original strand, 9661011 - 9661144
Alignment:
Q  35 ggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatg 134  Q
    |||||| ||||||||||| ||||| ||||||| | | ||||||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||||||    
T  9661011 ggcaccagttaaggatatgaaaaaagaaattacataatagttaatgcattgaaattgtataattaatttaaaataaagttaaaagcagtttccttttatg 9661110  T
Q  135 ataataattcccttttatgatatgcttaaccagt 168  Q
     |||||||||| |||||| ||||| |||| ||||    
T  9661111 gtaataattccattttataatatgtttaatcagt 9661144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 34477717 - 34477612
Alignment:
Q  29 ccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcct 128  Q
    |||| |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||| |||||||||||| ||||||||||||    
T  34477717 cccccgggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttcct 34477618  T
Q  129 tttatg 134  Q
    ||||||    
T  34477617 tttatg 34477612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 29 - 165
Target Start/End: Complemental strand, 23629743 - 23629607
Alignment:
Q  29 ccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcct 128  Q
    |||| |||||| | |||||||||| |||||| |||||||| ||||||||||| ||||||||||| | |||| ||||||||||||||||||||| ||||||    
T  23629743 ccccggggcactgattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattgtgtaattactttataataaagtcaaaaacaatttcct 23629644  T
Q  129 tttatgataataattcccttttatgatatgcttaacc 165  Q
    ||||||| |||||||  |||||||| ||| |||||||    
T  23629643 tttatgacaataattttcttttatgttatacttaacc 23629607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 41 - 169
Target Start/End: Original strand, 28225252 - 28225379
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| ||||||||| ||||| |||| |||||| ||||||||||| | |||||||||||||||||||||||||| ||| |||||||| |||||    
T  28225252 ggttaaggatatgaaaaaggaa-ttatatagtaattaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaata 28225350  T
Q  141 attcccttttatgatatgcttaaccagtg 169  Q
    ||||||||||||| ||| ||||| |||||    
T  28225351 attcccttttatggtatccttaaacagtg 28225379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 54 - 144
Target Start/End: Original strand, 31280365 - 31280455
Alignment:
Q  54 aaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattc 144  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||  |||||||||    
T  31280365 aaaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataataatgtcaaaaacggtttccttttatagtaataattc 31280455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 13529479 - 13529554
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataata 109  Q
    |||||| |||||||||| | ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||    
T  13529479 gggcactggttaaggatgtgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataata 13529554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 187
Target Start/End: Complemental strand, 11616285 - 11616141
Alignment:
Q  43 ttaaggatataaaaaaggaaattatacagtagttaatgcattgaaa-ttgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    |||||||||  ||||| | ||||||| |||||||| |||||||||| |||||| ||||||  |||| || |||||||| |  ||| |||| | |||||||    
T  11616285 ttaaggatactaaaaaagtaattatatagtagttattgcattgaaaattgtataattaatacataaaaatgtcaaaaa-atattctttttttaataataa 11616187  T
Q  142 ttcccttttatgatatgcttaaccagtgctctagggacaccggtta 187  Q
     |  ||||| || ||| |||||||||||||| ||||||||||||||    
T  11616186 cttgcttttgtggtattcttaaccagtgctccagggacaccggtta 11616141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 34706730 - 34706901
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggat-ataaaaaaggaaattatacagtagttaatgcattg-aaattgtattattaatttataataaagtcaaa 117  Q
    ||||||| ||||  ||||||||||||||||| ||||||| ||||||||||   || ||| ||||||| ||||||| | ||||||  ||||  |||||||     
T  34706730 aaccggtgccccgggggcaccggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaac 34706829  T
Q  118 aacagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
    || |  ||||||||||| ||| |||| |||||| |  |||||||||||||||| |  ||| ||||||||||||    
T  34706830 aa-aacttccttttatggtaagaatttccttttttcgtatgcttaaccagtgccccgggggcaccggttagca 34706901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 22417303 - 22417353
Alignment:
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgc 170  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||| ||||||    
T  22417303 cagtttccttttatgctaataattctcttttatggtatgcttaatcagtgc 22417353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 170
Target Start/End: Original strand, 1127839 - 1127976
Alignment:
Q  34 gggcaccggttaaggat-ataaaaaaggaaattatacagtagttaatgcattg-aaattgtattattaatttataataaagtcaaaaacagtttcctttt 131  Q
    ||||||||||||||||| ||||||| ||||||||||   || ||| ||||||| ||||||| | ||||||||||||  ||||||| || | |||  ||||    
T  1127839 gggcaccggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatttataaataagtcaacaaaacttt-ttttt 1127937  T
Q  132 atgataataattcccttttatgatatgcttaaccagtgc 170  Q
    ||| ||| ||||  ||||| |  ||||||||||||||||    
T  1127938 atggtaagaattttctttttttgtatgcttaaccagtgc 1127976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 28564321 - 28564388
Alignment:
Q  95 tattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatgatatgcttaa 163  Q
    ||||||||||||| ||  |||||||||||||||||||||| |||||| | |||||| || ||| |||||    
T  28564321 tattaatttataa-aatctcaaaaacagtttccttttatggtaataaattccttttttggtatccttaa 28564388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 3e-58; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 20831729 - 20831551
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| || ||| |||||||||||| ||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||     
T  20831729 aaccggtgcccccgggacactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaatagtataattaatttataataaagtcaaaag 20831630  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||| ||||||||  ||||||||||||||||| ||||||    
T  20831629 cagtttccttttatggtaataattctcttttatggtatgcttaatcagtgctcccgggacaccggttagcaggacccat 20831551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 20 - 197
Target Start/End: Original strand, 34228692 - 34228869
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||  |||||| |||||||||||| ||||||||||||||| |||| |||||||||||||||||| | ||||||| ||||||||||||||||    
T  34228692 aaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaattgataataaagtcaaaaa 34228791  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccca 197  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||| |  ||| ||||||||||||| |||||    
T  34228792 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccca 34228869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 27988675 - 27988500
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| || || |||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  27988675 aaccggtgcctccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaa 27988576  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||| |  ||| ||||||||||||| ||||    
T  27988575 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgc-ccgggggcaccggttagcaggaccc 27988500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 28045977 - 28045802
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| || || |||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  28045977 aaccggtgcctccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaa 28045878  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||| |  ||| ||||||||||||| ||||    
T  28045877 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgc-ccgggggcaccggttagcaggaccc 28045802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 30675748 - 30675578
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  30675748 aaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 30675649  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcag 191  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||||| |  |||||||||||||||||    
T  30675648 cagtttccttttatggtaataatt-ccttttatggtatgcttaaccagtgccccggggacaccggttagcag 30675578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 16888719 - 16888542
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  16888719 aaccggtgccccc-gggcacaggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaa 16888621  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
    ||||||||||||||| ||||||||| ||||| || |||||||||||| ||| |  ||| ||||||||||||| ||||||    
T  16888620 cagtttccttttatggtaataattctcttttgtggtatgcttaaccaatgccccgggggcaccggttagcaggacccat 16888542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 4537920 - 4537744
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| || || |||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||| | | ||||||| ||||||||||||||||    
T  4537920 aaccggtgcctccggggcactggttaaggatataaaataggaaattatatagtagttaatgcattgaaattatgtaattaattgataataaagtcaaaaa 4537821  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| |||| | || | ||||||||||||| ||||    
T  4537820 cagtttccttttatggtaataattcccttttatggtatgcttaacctgtgccccagaggcaccggttagcaggaccc 4537744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 43 - 198
Target Start/End: Complemental strand, 7304671 - 7304516
Alignment:
Q  43 ttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataat 142  Q
    |||||||||| |||||| |||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||    
T  7304671 ttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgaaaataat 7304572  T
Q  143 tcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
    || |||||||| ||||||||||||||||||  ||| |||||||||| || ||||||    
T  7304571 tctcttttatggtatgcttaaccagtgctccgggggcaccggttagtaggacccat 7304516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 196
Target Start/End: Original strand, 11112670 - 11112825
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||    
T  11112670 ggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatgataata 11112769  T
Q  141 attcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||| |||||||| ||||||||||| |||| || ||| ||| ||||||||| ||||    
T  11112770 attcacttttatggtatgcttaacctgtgccctgggggcactggttagcaggaccc 11112825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 168476 - 168652
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| || || |||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  168476 aaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 168575  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||| ||| |  ||| ||||||||||||| ||||    
T  168576 cagtttccttttatggtaataattccattttatggtatgcttaaccaatgccccgggggcaccggttagcaggaccc 168652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 41 - 196
Target Start/End: Original strand, 32113939 - 32114095
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagttt-ccttttatgataat 139  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||||||||||    
T  32113939 ggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtttaattaatttataataaagtaaaaaacagtttcccttttatgataat 32114038  T
Q  140 aattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||||||||||||  |||| ||||||||||||| || | ||||||||||||| ||||    
T  32114039 aattcccttttatagtatgtttaaccagtgctccagagccaccggttagcaggaccc 32114095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 34 - 169
Target Start/End: Original strand, 28626792 - 28626927
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    ||||||||||||||||| | ||||||||||||||| ||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||| ||||||    
T  28626792 gggcaccggttaaggatgtgaaaaaggaaattatatagtagttaatgtattgaaattgtgtgattaatttataataaagtcaaaaacagtttctttttat 28626891  T
Q  134 gataataattcccttttatgatatgcttaaccagtg 169  Q
    |||||||||||||||||||| ||||||||| |||||    
T  28626892 gataataattcccttttatggtatgcttaatcagtg 28626927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 33357289 - 33357155
Alignment:
Q  36 gcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatga 135  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||     
T  33357289 gcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgg 33357190  T
Q  136 taataattcccttttatgatatgcttaaccagtgc 170  Q
    ||||||||| |||||||| |||||||||| |||||    
T  33357189 taataattctcttttatggtatgcttaactagtgc 33357155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 20 - 169
Target Start/End: Original strand, 12203865 - 12204013
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| ||| ||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  12203865 aaccggtgccccc-gggtaccggttaagggtatgaaaaaagaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 12203963  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtg 169  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  12203964 cagtttccttttatgataataattcccttttatggtatgctgaaccagtg 12204013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 20 - 169
Target Start/End: Original strand, 12448293 - 12448441
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| ||| ||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  12448293 aaccggtgccccc-gggtaccggttaagggtatgaaaaaagaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 12448391  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtg 169  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  12448392 cagtttccttttatgataataattcccttttatggtatgctgaaccagtg 12448441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 16890642 - 16890485
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||    
T  16890642 gggcaccagttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttccttttat 16890543  T
Q  134 gataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcag 191  Q
    | |||||||||| ||||||| ||||||||||| ||||    ||| |||||||||||||    
T  16890542 ggtaataattcctttttatggtatgcttaaccggtgcctccggggcaccggttagcag 16890485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 13643022 - 13643197
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||||||  ||||||||||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  13643022 aaccggtgcccccggggcactggttaaggatacgaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaa 13643121  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
     |  ||||||||||| ||||||||| |||||||| |||||||||||||||| |||||  ||||||||||||| ||||    
T  13643122 -aaattccttttatggtaataattctcttttatggtatgcttaaccagtgccctaggagcaccggttagcaggaccc 13643197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 13743447 - 13743622
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||||||  ||||||||||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  13743447 aaccggtgcccccggggcactggttaaggatacgaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaa 13743546  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
     |  ||||||||||| ||||||||| |||||||| |||||||||||||||| |||||  ||||||||||||| ||||    
T  13743547 -aaattccttttatggtaataattctcttttatggtatgcttaaccagtgccctaggagcaccggttagcaggaccc 13743622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 42035154 - 42034988
Alignment:
Q  23 cggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacag 122  Q
    |||| ||||| | |||| |||||||||||| ||||||||||||||| ||||||||||| ||||||||||| | ||||||||||||||||||||||||||     
T  42035154 cggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaa 42035055  T
Q  123 tttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagc 189  Q
    ||| |||||||| |||||||||||||||||| ||||||||||  |||| | || |||||||||||||    
T  42035054 ttttcttttatggtaataattcccttttatggtatgcttaacacgtgccccagagacaccggttagc 42034988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 20 - 169
Target Start/End: Original strand, 21595857 - 21596005
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||| ||| ||||||||||||||| || |||||||||||||||||||| | ||||||||||||||| ||||||||    
T  21595857 aaccggtgccccc-gggcactggttaagggtatgaaaaaggaaattatataggagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 21595955  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtg 169  Q
    ||||||||||||||| || ||||||||||||||| |||||||||||||||    
T  21595956 cagtttccttttatggtattaattcccttttatggtatgcttaaccagtg 21596005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 20 - 169
Target Start/End: Complemental strand, 29444316 - 29444167
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| | ||| |||||| | |||||||||| ||||||||||||||| ||||||||| ||||||||||||| | ||||||||||||||||||||||||    
T  29444316 aaccggtgctcccggggcactgattaaggatatgaaaaaggaaattatatagtagttaacgcattgaaattgtgtaattaatttataataaagtcaaaaa 29444217  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtg 169  Q
    |||||| |||||||| |||||||||||||||||| |||| ||||||||||    
T  29444216 cagttttcttttatggtaataattcccttttatggtatgtttaaccagtg 29444167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 36730463 - 36730604
Alignment:
Q  29 ccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcct 128  Q
    ||||||| |||  ||||||||||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  36730463 ccccaggacactagttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttcct 36730562  T
Q  129 tttatgataataattcccttttatgatatgcttaaccagtgc 170  Q
    |||||| ||||||||| |||||||  ||||||||||| ||||    
T  36730563 tttatggtaataattctcttttatagtatgcttaacctgtgc 36730604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 2805428 - 2805286
Alignment:
Q  28 cccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcc 127  Q
    ||||| || ||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||| | |||||  |||||||||||||||| ||||||||    
T  2805428 cccccgggacactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaacctataataaagtcaaaagcagtttcc 2805329  T
Q  128 ttttatgataataattcccttttatgatatgcttaaccagtgc 170  Q
    ||||||| |||||||||||||||||| ||||||||||||||||    
T  2805328 ttttatggtaataattcccttttatggtatgcttaaccagtgc 2805286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 34 - 168
Target Start/End: Original strand, 4648218 - 4648352
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| | |||||||||| ||||||||||||||| |||||||||| |||||||||||| | ||||||||||||||| ||||||||||||||| ||| ||    
T  4648218 gggcactgattaaggatatgaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataataatgtcaaaaacagtttcttttgat 4648317  T
Q  134 gataataattcccttttatgatatgcttaaccagt 168  Q
    | |||||||||||||||||||||||||||||||||    
T  4648318 ggtaataattcccttttatgatatgcttaaccagt 4648352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 9063212 - 9063078
Alignment:
Q  36 gcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatga 135  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||||||||| ||   |||||||||||||||||||||||||| ||| ||||||||     
T  9063212 gcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaatcgtgcaattaatttataataaagtcaaaaacaattttcttttatgg 9063113  T
Q  136 taataattcccttttatgatatgcttaaccagtgc 170  Q
    ||||||||||||||| |||||||||||||||||||    
T  9063112 taataattcccttttgtgatatgcttaaccagtgc 9063078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 20 - 197
Target Start/End: Complemental strand, 16394237 - 16394060
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||||| | |||||| |||||||| | ||||||||||||||||||  | | ||||||| ||||||||||||||||    
T  16394237 aaccggtgcccccggggcactggttaaggatgtgaaaaagaaaattatataatagttaatgcattgaaataatgtaattaattgataataaagtcaaaaa 16394138  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccca 197  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||||| ||| |  ||| ||||||||||||| |||||    
T  16394137 cagtttccttttatgctaataattctcttttatggtatgcttaaccaatgccccgggggcaccggttagcaggaccca 16394060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 16785107 - 16785246
Alignment:
Q  31 ccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttt 130  Q
    ||||||||| |||||||||||| ||||| ||||||||| || |||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  16785107 ccagggcactggttaaggatatgaaaaaagaaattatatagcagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttt 16785206  T
Q  131 tatgataataattcccttttatgatatgcttaaccagtgc 170  Q
    ||| |||||||||| |||||||| |||| |||||| ||||    
T  16785207 tataataataattctcttttatggtatgattaacccgtgc 16785246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 43119227 - 43119373
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||| | |||||| | |||| ||||| |||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43119227 aaccggtgccctcggggcactgattaaagatatgaaaaagaaaattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaaa 43119326  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaacca 166  Q
    |||||| |||||||| | ||||||| |||||||| ||||||||||||    
T  43119327 cagttttcttttatggtgataattctcttttatggtatgcttaacca 43119373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 49 - 170
Target Start/End: Complemental strand, 3930380 - 3930259
Alignment:
Q  49 atataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattccctt 148  Q
    |||| ||| ||||||||||| |||||||||||||||||| |||| | ||||||| |||||||||||||||||||||||||||| ||||||||||| ||||    
T  3930380 atatgaaagaggaaattatatagtagttaatgcattgaagttgtgtaattaattgataataaagtcaaaaacagtttccttttttgataataatttcctt 3930281  T
Q  149 ttatgatatgcttaaccagtgc 170  Q
    ||||||||||||||||||||||    
T  3930280 ttatgatatgcttaaccagtgc 3930259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 29 - 192
Target Start/End: Complemental strand, 9254068 - 9253906
Alignment:
Q  29 ccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcct 128  Q
    |||| |||||| |||||||||||| ||||| |||||| || ||||||||||||||||||||||| | ||||||  |||||||||||||||||||||||||    
T  9254068 ccccggggcactggttaaggatatgaaaaatgaaattttatagtagttaatgcattgaaattgtgtaattaatg-ataataaagtcaaaaacagtttcct 9253970  T
Q  129 tttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcaga 192  Q
    |||||  ||||||||| |||||||| |||||||||||| ||  | |||| ||||||||||||||    
T  9253969 tttatagtaataattctcttttatggtatgcttaaccaatgtcccaggggcaccggttagcaga 9253906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 41 - 198
Target Start/End: Complemental strand, 9537979 - 9537822
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| ||||||| | |||||||||||||||| ||||||  |||||| ||||||  |||||    
T  9537979 ggttaaggatatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttataataaattcaaaaggagtttctttttatagtaata 9537880  T
Q  141 attcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
    ||| ||||||||| |||||||||||||||  |  | ||||||||||||||| ||||||    
T  9537879 atttccttttatggtatgcttaaccagtgtcccggagacaccggttagcaggacccat 9537822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 37373216 - 37373360
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| || ||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||| | ||||||| ||||||||||| ||||    
T  37373216 aaccggtgccccc-ggacactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaattgataataaagtcgaaaa 37373314  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaacc 165  Q
    |||||| |||||||| |||||||||||||| ||| |||||||||||    
T  37373315 cagttttcttttatggtaataattccctttcatggtatgcttaacc 37373360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 41 - 156
Target Start/End: Original strand, 10870383 - 10870498
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||| |||||||||||| |||||||| | |||||||| |||||||||||| | |||||||||||||||| |||||||||||||||||||||| |||||    
T  10870383 ggttaatgatataaaaaagaaaattatataatagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaata 10870482  T
Q  141 attcccttttatgata 156  Q
    ||||||||||||||||    
T  10870483 attcccttttatgata 10870498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 35 - 198
Target Start/End: Original strand, 40831302 - 40831465
Alignment:
Q  35 ggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatg 134  Q
    ||||| |||||| ||||| |||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||    
T  40831302 ggcactggttaaagatatgaaaaagaaaattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaaacaattttcttttatg 40831401  T
Q  135 ataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
     ||||||||  |||||||  ||||| ||| | || | || | ||||||||||||||| ||||||    
T  40831402 gtaataattttcttttatagtatgcataatctgtaccctggagacaccggttagcaggacccat 40831465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 43 - 190
Target Start/End: Original strand, 29235268 - 29235415
Alignment:
Q  43 ttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataat 142  Q
    |||||||||||||||| ||||||||| ||||||||||||||| || |||| | |||||||||||||||| ||||||| || |||||||||||||||||||    
T  29235268 ttaaggatataaaaaaagaaattatatagtagttaatgcattaaatttgtgtaattaatttataataaaatcaaaaataggttccttttatgataataat 29235367  T
Q  143 tcccttttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
    | ||||||||   ||||||||||||||  |  || |||||||||||||    
T  29235368 ttccttttataggatgcttaaccagtgtcccgggaacaccggttagca 29235415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 73 - 170
Target Start/End: Original strand, 39406905 - 39407002
Alignment:
Q  73 agttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatgatatgcttaaccagtgc 170  Q
    ||||||||| || ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||    
T  39406905 agttaatgcgttaaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgtttaactagtgc 39407002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 42 - 159
Target Start/End: Original strand, 17467635 - 17467752
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    ||||| ||||| |||||||||||||| ||||| |||||||||||||||||| | ||||||| |||||||| ||||||||| ||||||||||  |||||||    
T  17467635 gttaatgatatgaaaaaggaaattatgcagtaattaatgcattgaaattgtgtaattaattgataataaaatcaaaaacaatttccttttactataataa 17467734  T
Q  142 ttcccttttatgatatgc 159  Q
    |||  |||||| ||||||    
T  17467735 ttcaattttataatatgc 17467752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 42433698 - 42433590
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    ||||||| |||  ||||||||||||||| | ||||||||||||||||||||| | |||||||||||| ||||||||||||||||| |||||||| |||||    
T  42433698 ggttaagcatactaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataa-aaagtcaaaaacagttttcttttatggtaata 42433600  T
Q  141 attccctttt 150  Q
    ||| ||||||    
T  42433599 atttcctttt 42433590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 360
Target Start/End: Original strand, 40369791 - 40369954
Alignment:
Q  197 attagttaatttgcttgtgctacaagcatcttaactaacttggttggttagttacttgcacttcaagtaacttaaccaaacctaactaacaatatgagtt 296  Q
    |||||| || ||||||||||| | ||||||||||||||||| |||| ||||||||||||| | ||||||| ||||||||||||||||||||||  |||||    
T  40369791 attagtcaagttgcttgtgctccgagcatcttaactaacttagttgattagttacttgcattacaagtaatttaaccaaacctaactaacaatccgagtt 40369890  T
Q  297 cttaacaaactcggtaactatccaacaatcttagcctctaatttcaattatatctaaatagatt 360  Q
      |||| || || |   ||| |||||| | ||| |||||||||| | |||||||| ||||||||    
T  40369891 tataactaattcagcttctaaccaacatttttaacctctaatttgagttatatctcaatagatt 40369954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 82 - 168
Target Start/End: Complemental strand, 24843393 - 24843307
Alignment:
Q  82 attgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatgatatgcttaaccagt 168  Q
    ||||||||||| | ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| ||||    
T  24843393 attgaaattgtgtaattaatttataataaagtcaaaatcagtttccttttatgacaataattctcttttatggtatgcttaatcagt 24843307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 150
Target Start/End: Original strand, 22956728 - 22956845
Alignment:
Q  32 cagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcctttt 131  Q
    |||||||| |||||||  ||||||||||||| | |||  ||||||||| |||| ||||| | | ||||||||||||||| ||||||||||||||||||||    
T  22956728 cagggcactggttaagagtataaaaaaggaa-tcatatggtagttaatacattaaaattatgtaattaatttataataatgtcaaaaacagtttcctttt 22956826  T
Q  132 atgataataattccctttt 150  Q
    ||| ||| |||||||||||    
T  22956827 atggtaaaaattccctttt 22956845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 22451835 - 22451929
Alignment:
Q  61 aaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatgata 156  Q
    |||||||| || |||||||||||||||||||| | |||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| ||||||    
T  22451835 aaattatatagcagttaatgcattgaaattgtgtaattaatttataa-aaagtcaaaaatagcttccttttatggtaataatttcctttcatgata 22451929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 34192809 - 34192884
Alignment:
Q  44 taaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    |||| |||| ||||||||||||||| | ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  34192809 taagaatatgaaaaaggaaattatatactagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaa 34192884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 115
Target Start/End: Original strand, 9278244 - 9278317
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtca 115  Q
    ||||| ||||| ||||||||||||||| | ||||||||||||||||||||| | ||||||||||||||||||||    
T  9278244 gttaaagatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataataaagtca 9278317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 10618028 - 10618123
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtca 115  Q
    ||||||| || | ||||||| |||||||||||| |||||| |||||||| ||||||||||||| | ||||||| | ||||||| ||||||||||||    
T  10618028 aaccggtgcctctagggcacaggttaaggatatgaaaaagaaaattatatagtagttaatgcaattaaattgtgtaattaattgataataaagtca 10618123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 64 - 165
Target Start/End: Complemental strand, 30933453 - 30933353
Alignment:
Q  64 ttatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatgatatgcttaa 163  Q
    ||||| |||| |||||||||||||||||| | |||||||||||| ||||| ||||||| ||| |||||| ||||||||| ||| ||| | ||||| ||||    
T  30933453 ttatatagtaattaatgcattgaaattgtgtaattaatttataa-aaagttaaaaacatttttcttttacgataataatgcccctttttaatatgtttaa 30933355  T
Q  164 cc 165  Q
    ||    
T  30933354 cc 30933353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 12652656 - 12652707
Alignment:
Q  36 gcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaa 87  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  12652656 gcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaa 12652707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 36057967 - 36057897
Alignment:
Q  82 attgaaattgtattattaatttataataa--agtcaaaaacagtttccttttatgataataattccctttt 150  Q
    ||||||||||||| |||||||||||| ||  ||||||||| ||||| ||||||||||||||||| ||||||    
T  36057967 attgaaattgtataattaatttataaaaagtagtcaaaaaaagttttcttttatgataataatttcctttt 36057897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 14191103 - 14191036
Alignment:
Q  103 tataataaagtcaaaaacagtttccttttatgataataattcccttttatgatatgcttaaccagtgc 170  Q
    ||||||||| |||||||||||||  ||||||||||||||||| |||||||  |||  |||||||||||    
T  14191103 tataataaaatcaaaaacagttttattttatgataataattctcttttatagtatttttaaccagtgc 14191036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 170
Target Start/End: Complemental strand, 39751648 - 39751497
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggat-ataaaaaaggaaattatacagtagttaatgcatt-gaaattgtattattaatttataataaagtcaaa 117  Q
    ||||||| ||||| |||||| |||||||||| ||||||| | |||||||| | || ||| ||||||  ||||||| | |||||| |||||  |||||||     
T  39751648 aaccggtgcccccggggcactggttaaggataataaaaaggaaaattatatattatttattgcattaaaaattgtttaattaatctataaataagtcaac 39751549  T
Q  118 aacagtttccttttatgataataattcccttttatgatatgcttaaccagtgc 170  Q
    || |  ||||||||||| ||| |||| |||||| |  ||||||||||||||||    
T  39751548 aa-aacttccttttatggtaagaatttcctttttttgtatgcttaaccagtgc 39751497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 191
Target Start/End: Original strand, 35695612 - 35695683
Alignment:
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcag 191  Q
    ||||||| ||||||||||||||||  ||||||||||||  ||||||| |||||  | ||||||||| |||||    
T  35695612 cagtttcattttatgataataattttcttttatgatatctttaaccaatgctccggagacaccggtcagcag 35695683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 150
Target Start/End: Original strand, 40267947 - 40268062
Alignment:
Q  36 gcaccggttaaggata-taaaaaaggaaattatacagtagttaatgcattgaaa-ttgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||| ||||||||||| |||||| ||||||||||   || ||| |||||||||| |||| | |||||| |||||  ||||||| || | || ||||||||    
T  40267947 gcactggttaaggataataaaaagggaaattataggttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaactt-ccttttat 40268045  T
Q  134 gataataattccctttt 150  Q
    |||||||||| ||||||    
T  40268046 gataataatttcctttt 40268062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 43714364 - 43714194
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggata-taaaaaaggaaattatacagtagttaatgcattgaaa-ttgtattattaatttataataaagtcaaa 117  Q
    ||||||| ||||| |||||| ||||| ||||| |||||| ||||||||||   || ||| |||||||||| |||| | |||||| |||||  |||||||     
T  43714364 aaccggtgcccccggggcactggtta-ggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaac 43714266  T
Q  118 aacagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
    || | || ||||||||| ||| ||||   |||| |  |||||||||||||||| |  ||||||||||||||||    
T  43714265 aaaactt-ccttttatggtaaaaatttattttttttgtatgcttaaccagtgcccccgggacaccggttagca 43714194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 5e-57; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 11958143 - 11957967
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||| ||||||||||||||||||||| ||||||||||||| ||||||||| | ||||||| ||||||||||||||||    
T  11958143 aaccggtgcccccggggcacaggttaaagatataaaaaaggaaattatatagtagttaatgcaatgaaattgtgtaattaattgataataaagtcaaaaa 11958044  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||||||| | |||| ||||||||||||| ||||    
T  11958043 cagtttccttttatggtaataattcccttttatggcatgcttaaccagtgccccaggggcaccggttagcaggaccc 11957967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 34651008 - 34650833
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  34651008 aaccggtgccccc-gggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 34650910  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||| |  ||| ||||||||||||| ||||    
T  34650909 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 34650833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 49 - 190
Target Start/End: Original strand, 20175266 - 20175406
Alignment:
Q  49 atataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattccctt 148  Q
    |||||||||| ||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  20175266 atataaaaaaagaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatgataataattccctt 20175365  T
Q  149 ttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
    |||| ||||||||||| |||||||| ||||||||||||||||    
T  20175366 ttataatatgcttaactagtgctct-gggacaccggttagca 20175406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 34 - 198
Target Start/End: Complemental strand, 21547556 - 21547392
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||     
T  21547556 gggcatcggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttcattttaa 21547457  T
Q  134 gataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
    | ||||||||| | |||||| |||||||||||||| | |  | ||||||||||||||| ||||||    
T  21547456 gttaataattctcatttatggtatgcttaaccagtaccccggagacaccggttagcaggacccat 21547392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 13661818 - 13661994
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| | |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||| |||||||||||| |||    
T  13661818 aaccggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaa 13661917  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||| |||| |  | | ||||||||||||| ||||    
T  13661918 cagtttccttttatggtaataattctcttttatggtatgcttaacccgtgccccggaggcaccggttagcaggaccc 13661994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 8787349 - 8787525
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    |||||||  |||| |||||  |||||||| ||| ||||| ||||||||| ||||||||||||||||||||||| | |||||||||||||||  |||||||    
T  8787349 aaccggtgtccccggggcattggttaagggtatgaaaaatgaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatatcaaaaa 8787448  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| |||| |  ||| ||||||||||||| ||||    
T  8787449 cagtttccttttatgataataattccattttatggtatgcttaacctgtgccccgggggcaccggttagcaggaccc 8787525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 35132532 - 35132707
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| || ||| |||||||||||| ||||||||||||||| |||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  35132532 aaccggtgcccccgggacactggttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataataaagtcaaaaa 35132631  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||||| | |||||| ||||||||| |||||||| |||||||||||| ||| |  ||| ||||||||||||| ||||    
T  35132632 cagttttc-tttatggtaataattctcttttatggtatgcttaaccaatgccccgggggcaccggttagcaggaccc 35132707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 35504416 - 35504241
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| || ||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  35504416 aaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 35504317  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||| |||||||||  ||||||||||||||||| ||||||||||| ||| ||  ||| ||||||||||||| ||||    
T  35504316 cagttcccttttatggcaataattcccttttatggtatgcttaacccgtg-tccgggggcaccggttagcaggaccc 35504241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 29 - 198
Target Start/End: Original strand, 40057326 - 40057495
Alignment:
Q  29 ccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcct 128  Q
    ||||||||||||| |||||||||| ||||||||||||||| |||||||| ||||||||||| |||| |||||||||||||||| |||||| |||||| ||    
T  40057326 ccccagggcaccgattaaggatatgaaaaaggaaattatatagtagttagtgcattgaaatagtataattaatttataataaaatcaaaagcagttttct 40057425  T
Q  129 tttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
    |||||  ||||| |||||||||||||| || ||||||||||  || | | ||||||||||||| ||||||    
T  40057426 tttatagtaatatttcccttttatgatgtgtttaaccagtgacctcgaggcaccggttagcaggacccat 40057495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 6283572 - 6283742
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| || || ||||||  ||||| ||||| |||||| |||||||| | || |||||||||||||||||| | ||||||||||||||||||||||||    
T  6283572 aaccggtgcctccggggcactagttaaagatatgaaaaagaaaattatataataattaatgcattgaaattgtgtaattaatttataataaagtcaaaaa 6283671  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
    || ||| |||||||| |||||||||  ||||||| |||||||||||||||| |||||| ||||||||||||    
T  6283672 caattttcttttatggtaataattcatttttatggtatgcttaaccagtgccctaggggcaccggttagca 6283742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 9721762 - 9721640
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    ||||||| |||| ||||||||||||||| |||| |||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||    
T  9721762 ggttaagaatatgaaaaaggaaattatatagtaattaatgcattgaaattgtttaattaatttataataaagtcaaaaacagttttcttttatgataata 9721663  T
Q  141 attcccttttatgatatgcttaa 163  Q
    ||||||||||||| |||| ||||    
T  9721662 attcccttttatggtatgtttaa 9721640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 11846106 - 11846232
Alignment:
Q  44 taaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataatt 143  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||| | |||||||||||||||||||||||  |||||||||||||| |||||| |    
T  11846106 taaggatataaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataataaagtcaaaagtagtttccttttatggtaataaat 11846205  T
Q  144 cccttttatgatatgcttaaccagtgc 170  Q
    |||||||||  ||||||||||||||||    
T  11846206 cccttttatagtatgcttaaccagtgc 11846232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 10054528 - 10054351
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||| ||| ||||||||||||||| | || |||||||||||||||||| | ||||||||||||||| ||| ||||    
T  10054528 aaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatataataattaatgcattgaaattgtgtaattaatttataataatgtc-aaaa 10054430  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
    ||||||||||||||| |||||||||| ||||||| |||| |||||| |||| |  |||  |||||||||||| ||||||    
T  10054429 cagtttccttttatggtaataattcctttttatggtatgtttaacccgtgccccgggggtaccggttagcaggacccat 10054351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 43 - 196
Target Start/End: Complemental strand, 40564557 - 40564404
Alignment:
Q  43 ttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataat 142  Q
    |||||||| | ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||| |||  ||||||| |||||||    
T  40564557 ttaaggatttgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaatttttttttatggtaataat 40564458  T
Q  143 tcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    || |||||||| |||||||||||| | | | | || ||||||||||||| ||||    
T  40564457 tctcttttatggtatgcttaaccaataccccaagggcaccggttagcaggaccc 40564404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 54 - 170
Target Start/End: Original strand, 12506340 - 12506456
Alignment:
Q  54 aaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatg 153  Q
    ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||  ||||||||| ||||||||    
T  12506340 aaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatagtaataattctcttttatg 12506439  T
Q  154 atatgcttaaccagtgc 170  Q
      |||||||||||||||    
T  12506440 gaatgcttaaccagtgc 12506456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 34 - 142
Target Start/End: Original strand, 13470175 - 13470283
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| |||||||||||| ||||||||||| ||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13470175 gggcactggttaaggatatgaaaaaggaaataatatagtagtcaatgcattgaaattgtataattaatttataataaagtcaaaaacagtttccttttat 13470274  T
Q  134 gataataat 142  Q
    | |||||||    
T  13470275 ggtaataat 13470283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 19647834 - 19647720
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    |||||||| | || |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||| |||    
T  19647834 aaccggtatctccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtataattaattgataataaagtcataaa 19647735  T
Q  120 cagtttccttttatg 134  Q
    |||||||||||||||    
T  19647734 cagtttccttttatg 19647720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 10955997 - 10956109
Alignment:
Q  55 aaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatga 154  Q
    |||||| ||||||| ||||||||||||||||||||||| | |||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||    
T  10955997 aaaagggaattataaagtagttaatgcattgaaattgt-taattaatttataacaaagtcaaaaacaatttccttttatggtaataatttccttttatga 10956095  T
Q  155 tatgcttaaccagt 168  Q
    ||||||||||||||    
T  10956096 tatgcttaaccagt 10956109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 31909662 - 31909784
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||     ||||||||    
T  31909662 ggttaaggatattaaaagggaaattatatagtagttaatgcattgaaattgtgtaattgatttataataaagtcaaaaacagtttcc-----tgataata 31909756  T
Q  141 attcccttttatgatatgcttaaccagt 168  Q
    |||  |||||||| ||||||||||||||    
T  31909757 attttcttttatggtatgcttaaccagt 31909784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 10069979 - 10070092
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||| | ||||||||||||||||    
T  10069979 aaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaa-tgataataaagtcaaaaa 10070077  T
Q  120 cagtttccttttatg 134  Q
    ||||||| |||||||    
T  10070078 cagtttctttttatg 10070092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 4837276 - 4837369
Alignment:
Q  29 ccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacag 122  Q
    |||| |||||||||||||| |||| ||||||||||||||| |||| |||||||||||||||||| | |||||||||||||||||||||| ||||    
T  4837276 ccccggggcaccggttaagaatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaatttataataaagtcaaatacag 4837369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 19436990 - 19436865
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    ||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||| ||||| |||||  ||||||| ||||||    
T  19436990 gttaaggatatgaaaaaggaaattatatagtggttaaagcattgaaattgtataattaatttat-ataaagttaaaaatagttt-tttttatggtaataa 19436893  T
Q  142 ttcccttttatgatatgcttaaccagtg 169  Q
    ||| |||||||| |||| || |||||||    
T  19436892 ttctcttttatggtatgtttcaccagtg 19436865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 41 - 158
Target Start/End: Complemental strand, 39067091 - 39066973
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagt-agttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataat 139  Q
    |||||||||||| ||||| ||||||||| | | |||||||  ||||||||| | | |||||||||||||||||||||||||| | |||||||||| ||||    
T  39067091 ggttaaggatatgaaaaaagaaattatataattagttaatatattgaaattatgtaattaatttataataaagtcaaaaacaatatccttttatggtaat 39066992  T
Q  140 aattcccttttatgatatg 158  Q
    ||||| |||||||| ||||    
T  39066991 aattctcttttatgttatg 39066973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 159
Target Start/End: Original strand, 39069402 - 39069527
Alignment:
Q  31 ccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaa-gtcaaaaacagtttcctt 129  Q
    ||||||||| |||||||| ||| |||| |||||||||| ||||||||||||||| ||||||| | ||||   ||||||||  || ||||||| |||||||    
T  39069402 ccagggcactggttaagggtatgaaaa-ggaaattatatagtagttaatgcattaaaattgtgtaatta---tataataattgtgaaaaacaatttcctt 39069497  T
Q  130 ttatgataataattcccttttatgatatgc 159  Q
    ||||| ||||||||| ||||||||||||||    
T  39069498 ttatggtaataattctcttttatgatatgc 39069527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 70 - 165
Target Start/End: Original strand, 4268622 - 4268716
Alignment:
Q  70 agtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatgatatgcttaacc 165  Q
    ||||||||||||||| ||||||| | |||||||||||| ||| | |||||||||||||||||||| ||||||||  ||||| || |||||||||||    
T  4268622 agtagttaatgcattaaaattgtgtaattaatttataaaaaa-taaaaaacagtttccttttatggtaataattttcttttttggtatgcttaacc 4268716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 190
Target Start/End: Original strand, 31467743 - 31467900
Alignment:
Q  34 gggcaccggttaaggata-taaaaaaggaaattatacagtagttaatgcattgaaa-ttgtattattaatttataataaagtcaaaaacagtttcctttt 131  Q
    |||||||||||||||||| |||||| ||||||||||   || ||| |||||||||| |||| | |||||| |||||  ||||||| || | || ||||||    
T  31467743 gggcaccggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaactt-cctttt 31467841  T
Q  132 atgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
    ||| ||| |||| |||||| |  |||||||||||||||| | |||||||||||||||||    
T  31467842 atggtaagaatttcctttttttgtatgcttaaccagtgccccagggacaccggttagca 31467900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 2619711 - 2619635
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaa 118  Q
    ||||||||||| |||||| |||||||  ||||||||||| ||||||||||| | |||||||||||||||||| ||||    
T  2619711 gttaaggatatgaaaaagaaaattatttagtagttaatgtattgaaattgtgtaattaatttataataaagttaaaa 2619635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 6284826 - 6284892
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataa 107  Q
    |||||||||||  ||||||||||||||| |||| |||||| ||||||||||||| ||||||||||||    
T  6284826 ggttaaggatactaaaaaggaaattatatagtaattaatgtattgaaattgtataattaatttataa 6284892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 22973727 - 22973815
Alignment:
Q  52 taaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    |||| |||||| ||||| ||||  ||||| ||| ||||||| | |||||||||| | |||||  |||| |||||||||||||||||||||    
T  22973727 taaataaggaagttatatagtaactaatgaattaaaattgtgtaattaatttatca-aaagtataaaagagtttccttttatgataataa 22973815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 168
Target Start/End: Complemental strand, 2619628 - 2619596
Alignment:
Q  136 taataattcccttttatgatatgcttaaccagt 168  Q
    |||||||||||||||||||||||||||| ||||    
T  2619628 taataattcccttttatgatatgcttaatcagt 2619596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 170
Target Start/End: Complemental strand, 10956009 - 10955977
Alignment:
Q  138 ataattcccttttatgatatgcttaaccagtgc 170  Q
    |||||||||||||||| ||||||||||||||||    
T  10956009 ataattcccttttatggtatgcttaaccagtgc 10955977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 5e-57; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 20 - 200
Target Start/End: Original strand, 272230 - 272410
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  272230 aaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaa 272329  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccatta 200  Q
     |||||||||||||| |||||||||||||||||| ||||||||| | |||| |  ||| ||||||||||||| ||||||||    
T  272330 tagtttccttttatggtaataattcccttttatggtatgcttaatcggtgccccgggggcaccggttagcaggacccatta 272410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 46352644 - 46352822
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||| |||    
T  46352644 aaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatacagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaa 46352743  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| |||| |  | | ||||||||||||| ||||||    
T  46352744 cagtttccttttatggtaataattcccttttatggtatgcttaacccgtgccccggaggcaccggttagcaggacccat 46352822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 39074429 - 39074604
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||| ||||    
T  39074429 aaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtc-aaaa 39074527  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||| | |||| ||||||||||||| ||||    
T  39074528 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccaggggcaccggttagcaggaccc 39074604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 49893341 - 49893519
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||| | |||||| |||||||||||||||||    
T  49893341 aaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatctataataaagtcaaaaa 49893440  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| |||||| |  ||| ||||||||||| | ||||||    
T  49893441 cagtttccttttatggtaataattcccttttatggtatgcttaatcagtgccccgggggcaccggttagccggacccat 49893519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 52520691 - 52520867
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  52520691 aaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 52520790  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| |||||||||  ||||||| |||||||||||||||| |  ||| ||||||||||||| ||||    
T  52520791 cagtttccttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 52520867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 18 - 189
Target Start/End: Original strand, 858597 - 858768
Alignment:
Q  18 caaaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaa 117  Q
    ||||||||| ||||||| ||||  ||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  858597 caaaccggtgcccccagtgcactagttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaa 858696  T
Q  118 aacagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagc 189  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||||||| |||| |  ||| |||||||||||    
T  858697 aacagtttccttttatggtaataatttccttttatggtatgcttaacccgtgccccgggggcaccggttagc 858768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 43 - 197
Target Start/End: Complemental strand, 10617437 - 10617283
Alignment:
Q  43 ttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataat 142  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||| | |||||||||||||||||||||||||| |||||||||||| |||||||    
T  10617437 ttaaggatataaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttataataaagtcaaaaacaatttccttttatggtaataat 10617338  T
Q  143 tcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccca 197  Q
    ||||||||||| ||||||||||| |||| |  ||| ||||||||||||| |||||    
T  10617337 tcccttttatggtatgcttaacccgtgccccgggggcaccggttagcaggaccca 10617283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 20 - 170
Target Start/End: Original strand, 48725281 - 48725431
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||  |||||| |||||||||||| ||||||||||||||| |||| |||||||||||||||||| | ||||||| ||||||||||||||||    
T  48725281 aaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaattgataataaagtcaaaaa 48725380  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgc 170  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  48725381 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgc 48725431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 34 - 196
Target Start/End: Complemental strand, 42964411 - 42964249
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| |||||||||||| ||||| |||||| || ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||    
T  42964411 gggcactggttaaggatatgaaaaatgaaattttatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttat 42964312  T
Q  134 gataataattcccttttatgatatgcttaaccagtg-ctctagggacaccggttagcagaaccc 196  Q
      ||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||| ||||    
T  42964311 agtaataattcacttttatgatatgcttaaccagtgtctc-agggacaccggttagcaggaccc 42964249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 4168193 - 4168369
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| || || ||| || |||||||||||||||||||||||||||| ||||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  4168193 aaccggtgcctccggggaactggttaaggatataaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaa 4168292  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||||| |||||||| ||||||||| |||||||| ||||||||||| || | |  ||| ||||||||||||| ||||    
T  4168293 cagttttcttttatggtaataattctcttttatggtatgcttaacccgtaccccgggggcaccggttagcaggaccc 4168369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 36 - 198
Target Start/End: Complemental strand, 41554100 - 41553938
Alignment:
Q  36 gcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatga 135  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||     
T  41554100 gcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgg 41554001  T
Q  136 taataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
    ||||||||   ||||||| |||||||||| ||||| || || |||||| |||| || ||||||    
T  41554000 taataattattttttatggtatgcttaacaagtgccctgggaacaccgattagtaggacccat 41553938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 28 - 189
Target Start/End: Original strand, 28139327 - 28139488
Alignment:
Q  28 cccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcc 127  Q
    |||||| | ||| |||||||||||| ||||| ||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||    
T  28139327 cccccaagacactggttaaggatatgaaaaaagaaattaaatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaagcagattcc 28139426  T
Q  128 ttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagc 189  Q
    ||||||| |||||||||||||||||| ||| ||||| |||||||||   |||||||||||||    
T  28139427 ttttatggtaataattcccttttatggtatacttaaacagtgctctgaagacaccggttagc 28139488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 41304015 - 41304185
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| || || |||||  |||||||||||| ||||||||||||||| |||| |||||||||||||||||||  ||||||| ||||||||||||||||    
T  41304015 aaccggtgcctccggggcagtggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgta--attaattgataataaagtcaaaaa 41304112  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcaga 192  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||| ||| |  | ||||||||||||||||    
T  41304113 cagtttccttttatggtaataatttccttttatggtatgcttaaccaatgccccggagacaccggttagcaga 41304185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 43786881 - 43787057
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| || || |||||| |||||| | ||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||  |||||||    
T  43786881 aaccggtgcctccggggcactggttaatggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatatcaaaaa 43786980  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| |||||||||  ||||||| |||||||||||||||| |  ||| ||||||||||||| ||||    
T  43786981 cagtttccttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 43787057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 7468429 - 7468570
Alignment:
Q  28 cccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcc 127  Q
    ||||| || ||| ||||||||| || ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |    
T  7468429 cccccgggacactggttaaggaaatgaaaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaagcagttttc 7468528  T
Q  128 ttttatgataataattcccttttatgatatgcttaaccagtgc 170  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||    
T  7468529 ttttatgataataa-tcccttttatggtatgcttaatcagtgc 7468570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 53489992 - 53489854
Alignment:
Q  28 cccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcc 127  Q
    ||||| |||||| |||||||| ||| ||||||||||||||| ||||||||||||||| ||||||| | ||||||||||||||| ||||||||||||||||    
T  53489992 cccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttataataatgtcaaaaacagtttcc 53489893  T
Q  128 ttttatgataataattcccttttatgatatgcttaacca 166  Q
    |||||||||||||||||  ||||||| ||||||||||||    
T  53489892 ttttatgataataattctattttatggtatgcttaacca 53489854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 2505380 - 2505523
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||| ||||| ||||||||||||||| |||||||| |||||||||||||| | ||||||| |||||||||||||||| |||||||||||||| |||||    
T  2505380 ggttaaagatatgaaaaaggaaattatatagtagttagtgcattgaaattgtgtaattaattcataataaagtcaaaaatagtttccttttatggtaata 2505479  T
Q  141 attcccttttatgatatgcttaaccagtgctctagggacaccgg 184  Q
    ||||||||||||| |||| ||||||||||| || ||| ||||||    
T  2505480 attcccttttatggtatgtttaaccagtgccctgggggcaccgg 2505523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 43 - 190
Target Start/End: Original strand, 42548128 - 42548274
Alignment:
Q  43 ttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataat 142  Q
    |||| ||||| ||||| ||||||||| ||||||||||||||||||||| | | |||||||||||||||||||||||| | |||| ||||||| |||||||    
T  42548128 ttaaagatatgaaaaaagaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaataatttcattttatggtaataat 42548227  T
Q  143 tcccttttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  42548228 tcccttttatggtatgcttaaccagtgctc-cgggacaccggttagca 42548274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 18014690 - 18014832
Alignment:
Q  28 cccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcc 127  Q
    ||||| |||||| | |||||||||| |||||| |||||||| ||||||||||||||||||||||| | |||||  ||||||||||| |||||||||||||    
T  18014690 cccccggggcactgattaaggatatgaaaaagtaaattatatagtagttaatgcattgaaattgtgtaattaaactataataaagttaaaaacagtttcc 18014789  T
Q  128 ttttatgataataattcccttttatgatatgcttaaccagtgc 170  Q
    |||||||||||||||| ||||||||| ||||||||| ||||||    
T  18014790 ttttatgataataatttccttttatggtatgcttaatcagtgc 18014832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 72 - 200
Target Start/End: Original strand, 6842681 - 6842809
Alignment:
Q  72 tagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatgatatgcttaaccagtgct 171  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||     
T  6842681 tagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccatttatggtatgcttaaccagtgcc 6842780  T
Q  172 ctagggacaccggttagcagaacccatta 200  Q
    |  ||| || |||||||||| ||||||||    
T  6842781 ccgggggcagcggttagcaggacccatta 6842809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 34 - 170
Target Start/End: Complemental strand, 40362742 - 40362606
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| | |||||||||| ||||| ||||||||| ||||||||||||||| ||||||| | ||||||| |||||||||||||||||||||| |||||||    
T  40362742 gggcactgattaaggatatgaaaaaagaaattatatagtagttaatgcattaaaattgtgtaattaattgataataaagtcaaaaacagttttcttttat 40362643  T
Q  134 gataataattcccttttatgatatgcttaaccagtgc 170  Q
    | ||||||||| |||||||| ||||||||||||||||    
T  40362642 ggtaataattctcttttatggtatgcttaaccagtgc 40362606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 33140937 - 33141043
Alignment:
Q  62 aattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatgatatgctt 161  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  33140937 aattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaagcagttttcttttatggtaataattcccttttatgatatgctt 33141036  T
Q  162 aaccagt 168  Q
    || ||||    
T  33141037 aatcagt 33141043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 41993773 - 41993620
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    |||||| |||| ||||| ||||||||| ||||||||||||||||||||| | | |||||||||||||||||| ||||||||||||||||||| |||||||    
T  41993773 gttaagtatattaaaaatgaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagttaaaaacagtttccttttat-ataataa 41993675  T
Q  142 ttcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||| |||||||| |||||||||| ||| | |||  | ||||||||||||||||||    
T  41993674 ttctcttttatggtatgcttaactagtaccctaaaggcaccggttagcagaaccc 41993620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 29241661 - 29241790
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    ||||||| ||||||||||| |||| |||||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| ||||||    
T  29241661 gggcaccagttaaggatatgaaaatggaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagattctttttat 29241760  T
Q  134 gataataattcccttttatgatatgcttaa 163  Q
    |||||||||||| ||||||  |||||||||    
T  29241761 gataataattccgttttatagtatgcttaa 29241790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 2938195 - 2938072
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||| |||||||||||| |||||||| ||||||||||||| ||||||||| | |||||||||||||||||||||||||| |||| ||||||| |||||    
T  2938195 ggttaaagatataaaaaagaaaattatatagtagttaatgcactgaaattgtgtgattaatttataataaagtcaaaaacaatttcattttatggtaata 2938096  T
Q  141 attcccttttatgatatgcttaac 164  Q
    |||| |||||||| ||||||||||    
T  2938095 attcacttttatggtatgcttaac 2938072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 34 - 169
Target Start/End: Original strand, 20924016 - 20924151
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| |||||||| ||| ||||||||||||||| |||||||||| |||||||||||| | |||||||||||||||  ||||||||||||||||||||     
T  20924016 gggcactggttaagggtatgaaaaaggaaattatatagtagttaattcattgaaattgtgtaattaatttataataatatcaaaaacagtttccttttaa 20924115  T
Q  134 gataataattcccttttatgatatgcttaaccagtg 169  Q
    | ||||||||| |||||||| ||| |||||||||||    
T  20924116 ggtaataattctcttttatggtatacttaaccagtg 20924151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 38852246 - 38852377
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagt---taatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataa 138  Q
    ||||||||||||||||| ||||||||| ||||||   ||||||||||||||||| | ||||||||||||||||||||||||||||||  |||||||||||    
T  38852246 gttaaggatataaaaaatgaaattatatagtagtaattaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttattttatgataa 38852345  T
Q  139 taattcccttttatgatatgcttaaccagtgc 170  Q
    |||||| |||||||| |||| |||||| ||||    
T  38852346 taattcacttttatggtatgtttaacccgtgc 38852377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 43 - 168
Target Start/End: Complemental strand, 50299098 - 50298973
Alignment:
Q  43 ttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataat 142  Q
    |||| |||||||||| | |||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||    
T  50299098 ttaaagatataaaaaggaaaattatatagtagttaatgcactgaaattgtgtaattaatttataataaagtcaaaaacagtttctttttatgataataat 50298999  T
Q  143 tcccttttatgatatgcttaaccagt 168  Q
    || || ||||| ||| ||||||||||    
T  50298998 tcactcttatggtatacttaaccagt 50298973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 22248918 - 22249042
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    ||||||||||| ||||||||||||||| |||||||| || ||||||||||| | ||||||| |||||||||||||||||||||| |||||||| ||||||    
T  22248918 gttaaggatatgaaaaaggaaattatatagtagttattgtattgaaattgtgtaattaattgataataaagtcaaaaacagttttcttttatggtaataa 22249017  T
Q  142 ttcccttttatgatatgcttaacca 166  Q
    |||||||||||  ||||||| ||||    
T  22249018 ttcccttttatagtatgcttgacca 22249042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 168
Target Start/End: Complemental strand, 50395738 - 50395591
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| || ||| ||||| |||||| |||||| ||||||||||||||||||||||| |||||||| | ||||||| ||||||||||| ||||    
T  50395738 aaccggtgcccccgggacactggttagggatatgaaaaagaaaattatacagtagttaatgcatagaaattgtgtaattaattgataataaagtc-aaaa 50395640  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagt 168  Q
    || |||||||||||| ||||||||| ||||||||||||| |||| ||||    
T  50395639 caatttccttttatggtaataattctcttttatgatatgattaatcagt 50395591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 34 - 172
Target Start/End: Original strand, 24488390 - 24488528
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| ||||||| || ||||||||||||||||| | |||||||||||| ||||| || | ||||||| |||||||| |||||||||||||| ||||||    
T  24488390 gggcactggttaagaatgtaaaaaaggaaattatataatagttaatgcatggaaatagtgtaattaattgataataaaatcaaaaacagtttctttttat 24488489  T
Q  134 gataataattcccttttatgatatgcttaaccagtgctc 172  Q
    | ||||||||| ||||||||||||||| ||| |||||||    
T  24488490 ggtaataattctcttttatgatatgctgaactagtgctc 24488528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 49529436 - 49529292
Alignment:
Q  29 ccccagggcaccggttaaggatataaaaaaggaaattataca---gtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagttt 125  Q
    |||| |||||| | |||||||||| |||||| |||||||| |   |||||||||||||||||||| | | |||||||||||||||||||||||||| |||    
T  49529436 ccccggggcactgattaaggatatgaaaaagaaaattatatactagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacatttt 49529337  T
Q  126 ccttttatgataataattcccttttatgatatgcttaaccagtgc 170  Q
    ||||||||| |||||||| ||||||||| |||| |||||||||||    
T  49529336 ccttttatggtaataatttccttttatggtatgtttaaccagtgc 49529292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 34 - 170
Target Start/End: Original strand, 52246606 - 52246743
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaac-agtttcctttta 132  Q
    |||||| |||||||||||| ||||| ||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||| | |||  |||||    
T  52246606 gggcactggttaaggatatgaaaaatgaaattatatagttgttaatgcattgaaattgtataattaatttataataaagtcaaaaacaatttttttttta 52246705  T
Q  133 tgataataattcccttttatgatatgcttaaccagtgc 170  Q
    |  |||||||| ||||||||| |||||||||| |||||    
T  52246706 tagtaataatttccttttatggtatgcttaactagtgc 52246743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 36 - 196
Target Start/End: Complemental strand, 43269899 - 43269739
Alignment:
Q  36 gcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatga 135  Q
    |||| |||||||||||| |||| |||||||| | ||||||||||||||||||||| | | |||||||||||||||| ||||| |||||||||||||||      
T  43269899 gcactggttaaggatatgaaaagggaaattacatagtagttaatgcattgaaattatgtaattaatttataataaaatcaaacacagtttccttttatag 43269800  T
Q  136 taataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||  | |||||| |||||||||||||||| |  | | ||||||||||||| ||||    
T  43269799 taataattatcctttatggtatgcttaaccagtgccccggaggcaccggttagcaggaccc 43269739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 35 - 158
Target Start/End: Original strand, 2119456 - 2119577
Alignment:
Q  35 ggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatg 134  Q
    ||||| |||||| ||||| ||||||||||||||| ||||||||||||||||||||||  | |||||||||||||||||||||||||| ||||||||||||    
T  2119456 ggcactggttaaagatatgaaaaaggaaattatatagtagttaatgcattgaaattgagtaattaatttataataaagtcaaaaacaatttccttttatg 2119555  T
Q  135 ataataattcccttttatgatatg 158  Q
     |||||||| ||||||||| ||||    
T  2119556 -taataatt-ccttttatggtatg 2119577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 13159929 - 13160055
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    ||||||||||| ||||||||||||||| |||||||||| |||||||||||| | ||||||| |||||||||||||||||||||| || ||| | ||||||    
T  13159929 gttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaattgataataaagtcaaaaacagttttctattacggtaataa 13160028  T
Q  142 ttcccttttatgatatgcttaaccagt 168  Q
    || | ||||||| ||||||||| ||||    
T  13160029 tttctttttatggtatgcttaatcagt 13160055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 43 - 196
Target Start/End: Complemental strand, 11308363 - 11308211
Alignment:
Q  43 ttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataat 142  Q
    |||||||| | ||||||||||||||| | ||||||||||||||||||  | | ||||||| |||||||| ||||||| |||||||||||||| |||||||    
T  11308363 ttaaggatgtgaaaaaggaaattatataatagttaatgcattgaaataatgtaattaattgataataaaatcaaaaatagtttccttttatggtaataat 11308264  T
Q  143 tcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    | ||||||||| |||||||||||| ||| | |||| ||||| ||||||| ||||    
T  11308263 t-ccttttatggtatgcttaaccaatgccccaggggcaccgattagcaggaccc 11308211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 35 - 169
Target Start/End: Complemental strand, 50359347 - 50359213
Alignment:
Q  35 ggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatg 134  Q
    ||||| |||||||| ||  |||||  |||||||| ||||||||||||||||||||||  | |||||| ||||||||||||||||||||||| ||||| ||    
T  50359347 ggcactggttaaggttaagaaaaaaaaaattatatagtagttaatgcattgaaattgggtaattaatatataataaagtcaaaaacagttttcttttgtg 50359248  T
Q  135 ataataattcccttttatgatatgcttaaccagtg 169  Q
     ||||||||  ||| |||| |||||||||||||||    
T  50359247 gtaataattatcttctatggtatgcttaaccagtg 50359213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 21010039 - 21010147
Alignment:
Q  52 taaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattccctttta 151  Q
    ||||||||||||||||| |||||||||  |||||||||||||| |||||||||||| ||||||||||| |||||| ||||||| |||||| | ||||||     
T  21010039 taaaaaaggaaattatatagtagttaa--cattgaaattgtataattaatttataa-aaagtcaaaaa-agtttctttttatggtaataacttccttttt 21010134  T
Q  152 tgatatgcttaac 164  Q
    | |||| ||||||    
T  21010135 taatatccttaac 21010147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 85 - 190
Target Start/End: Original strand, 52552549 - 52552652
Alignment:
Q  85 gaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccgg 184  Q
    |||||||| | |||||||||||||||||||||||||||| | |||||||| ||||||||| |||||||| |||  |||||||||| ||  |||||| |||    
T  52552549 gaaattgtgtaattaatttataataaagtcaaaaacagtat-cttttatggtaataattctcttttatggtatatttaaccagtg-tccggggacatcgg 52552646  T
Q  185 ttagca 190  Q
    ||||||    
T  52552647 ttagca 52552652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 168
Target Start/End: Original strand, 31514829 - 31514948
Alignment:
Q  48 gatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattccct 147  Q
    ||||| |||||  |||||||| ||||||||||| ||| ||||||| | |||||||||||||||| ||||||||| |||  ||||||  |||||||| |||    
T  31514829 gatatgaaaaataaaattatatagtagttaatgtattaaaattgtgtaattaatttataataaaatcaaaaacaattt-tttttatagtaataatttcct 31514927  T
Q  148 tttatgatatgcttaaccagt 168  Q
    |||||  ||| ||||||||||    
T  31514928 tttatagtatacttaaccagt 31514948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 2391631 - 2391688
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattg 91  Q
    |||||| |||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  2391631 gggcactggttaaggataagaaaaaggaaattatatagtagttaatgcattgaaattg 2391688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 2393392 - 2393449
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattg 91  Q
    |||||| |||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  2393392 gggcactggttaaggataagaaaaaggaaattatatagtagttaatgcattgaaattg 2393449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 2362880 - 2362955
Alignment:
Q  58 aggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatg 134  Q
    ||||||||||| | |||||||||||||||||| || | ||||||| |||||||| ||||||||||||| ||||||||    
T  2362880 aggaaattatata-tagttaatgcattgaaatagtgtaattaattgataataaaatcaaaaacagttttcttttatg 2362955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 23925294 - 23925359
Alignment:
Q  24 ggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaat 89  Q
    ||||||||| ||| || ||||||| |||||||||||||||||||| |||| |||||||||| ||||    
T  23925294 ggtacccccggggaactggttaagaatataaaaaaggaaattatatagtaattaatgcattaaaat 23925359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 168
Target Start/End: Original strand, 25743837 - 25743967
Alignment:
Q  38 accggttaaggata-taaaaaaggaaattatacagtagttaatgcatt-gaaattgtattattaatttataataaagtcaaaaacagtttccttttatga 135  Q
    |||| ||||||||| ||||||||||||||||| |||| ||| ||||||  ||||||| | ||||||| |||| |||||||||| | ||||| |||| |      
T  25743837 accgattaaggatactaaaaaaggaaattatatagtaattattgcattaaaaattgtgtaattaattcataa-aaagtcaaaatc-gtttcattttttag 25743934  T
Q  136 taataattcccttttatgatatgcttaaccagt 168  Q
    |||||||| |||||| || ||||||||||||||    
T  25743935 taataatttccttttttggtatgcttaaccagt 25743967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 52718198 - 52718249
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgt 92  Q
    |||||||||||| ||||||||||||||| |||||||||| |||| |||||||    
T  52718198 ggttaaggatatgaaaaaggaaattatatagtagttaatacattaaaattgt 52718249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 109
Target Start/End: Original strand, 6842604 - 6842642
Alignment:
Q  71 gtagttaatgcattgaaattgtattattaatttataata 109  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  6842604 gtagttaatgcattgaaattgtgtaattaatttataata 6842642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 34300775 - 34300721
Alignment:
Q  35 ggcaccggttaaggata-taaaaaaggaaattatacagtagttaatgcattgaaa 88  Q
    ||||| ||||||||||| ||||||| |||||||||||||||||| | ||||||||    
T  34300775 ggcactggttaaggataataaaaaatgaaattatacagtagttattacattgaaa 34300721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 20 - 207
Target Start/End: Original strand, 116214 - 116401
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||| ||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||| |||||||||||| |||    
T  116214 aaccggtgcccccggggcacaggttaaagatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaa 116313  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccattagttaatt 207  Q
    |||||||||||||||||||||||||||||||||| |||| |||||| |||| | ||||| |||||||||||| |||| ||| ||||||    
T  116314 cagtttccttttatgataataattcccttttatggtatgtttaacccgtgccccagggataccggttagcagtaccctttatttaatt 116401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 2e-56; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 34 - 197
Target Start/End: Original strand, 4628590 - 4628753
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||| | |||||||||||||||||||| ||||||||| |||||||    
T  4628590 gggcaccggttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattgtttaattaatttataataaagtcagaaacagtttacttttat 4628689  T
Q  134 gataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccca 197  Q
    | |||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||| |||||    
T  4628690 ggtaataattcccttttatggtatgcttaaccagtgccttaggggcaccggttagcaggaccca 4628753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 28 - 169
Target Start/End: Complemental strand, 29993655 - 29993514
Alignment:
Q  28 cccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcc 127  Q
    ||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| || |||||    
T  29993655 cccccggggcaccggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaatcaatttcc 29993556  T
Q  128 ttttatgataataattcccttttatgatatgcttaaccagtg 169  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  29993555 ttttatggtaataattcccttttatggtatgcttaaccagtg 29993514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 41 - 196
Target Start/End: Complemental strand, 13065032 - 13064876
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa-cagtttccttttatgataat 139  Q
    |||||||||||| ||||||||||||||| | || |||||| |||||| |||| | |||||||||||||||||||||||| ||||||||||||||| ||||    
T  13065032 ggttaaggatatgaaaaaggaaattatataatatttaatgtattgaatttgtgtaattaatttataataaagtcaaaaaacagtttccttttatggtaat 13064933  T
Q  140 aattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  13064932 aattcccttttatggtatgcttaaccagtgctctaggggcaccggttagcagaaccc 13064876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 41 - 169
Target Start/End: Complemental strand, 43594191 - 43594063
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  43594191 ggttaaggatataaaaaaggaaattatataatagttaatgcattgaaattgtataattaatttataataaagtcaaaaacagtttcctcttatgataata 43594092  T
Q  141 attcccttttatgatatgcttaaccagtg 169  Q
    |||| |||||||| |||||||||||||||    
T  43594091 attctcttttatggtatgcttaaccagtg 43594063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 24438487 - 24438665
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| ||||||  ||||||| ||| |||||||||| |||| ||||||||||||||||||||| | | ||||||||||||||| ||||||||    
T  24438487 aaccggtgcccccggggcactagttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaattatgtaattaatttataataatgtcaaaaa 24438586  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||| |  ||| ||||||||||||| ||||||    
T  24438587 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggacccat 24438665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 20 - 197
Target Start/End: Complemental strand, 24798578 - 24798402
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| ||||||  ||| ||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  24798578 aaccggtgccccc-gggcacttgttgaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaa 24798480  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccca 197  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||||| |  ||| |||| |||||||| |||||    
T  24798479 cagtttccttttatggtaataattcccttttatagtatgcttaaccagtgccccgggggcaccagttagcaggaccca 24798402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 37 - 196
Target Start/End: Original strand, 47083082 - 47083240
Alignment:
Q  37 caccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgat 136  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||| ||||||||||| | ||||||| |||||||||| |||||||||||||||||||| |    
T  47083082 caccggttaaggatatgaaaaaagaaattatatagtagttaatgtattgaaattgtgtaattaattgataataaagttaaaaacagtttccttttatggt 47083181  T
Q  137 aataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||||||||||||||||||||| ||||||| |||||  ||| |||||||||| |||||||    
T  47083182 aataattcccttttatgatatgtttaaccaatgctc-cggggcaccggttagtagaaccc 47083240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 45045801 - 45045930
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||| ||| ||||| ||||||||| |||| |||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||    
T  45045801 ggttaagggtatgaaaaatgaaattatatagtaattaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatgataata 45045900  T
Q  141 attcccttttatgatatgcttaaccagtgc 170  Q
    ||||||||||||| ||||||||||||||||    
T  45045901 attcccttttatggtatgcttaaccagtgc 45045930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 41 - 197
Target Start/End: Complemental strand, 525230 - 525075
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||| ||||| |||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||    
T  525230 ggttaaagatatgaaaaagaaaagtatacagtagttaatgcattgaaattgtataattaatttataataaaatcaaaaacagtttccttttatggtaata 525131  T
Q  141 attcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccca 197  Q
    |||| ||||||||||||| ||||||||| |||  ||  ||||||||||||| |||||    
T  525130 attctcttttatgatatgtttaaccagtactc-cggagcaccggttagcaggaccca 525075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 12218612 - 12218437
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| || |||| |||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||| | |||||    
T  12218612 aaccggtgcccccggggcactggataagtatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaaataaaaaa 12218513  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
     |||||||||||||| ||||||||| |||||||| |||| ||||||||||| |  ||||||||||||||||| ||||    
T  12218512 tagtttccttttatggtaataattctcttttatggtatgtttaaccagtgc-cccgggacaccggttagcaggaccc 12218437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 7689353 - 7689226
Alignment:
Q  43 ttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataat 142  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||| |||||||    
T  7689353 ttaaggatataaaaaaggaaattttacagtaattaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaataat 7689254  T
Q  143 tcccttttatgatatgcttaaccagtgc 170  Q
    || |||||||| ||| ||||||||||||    
T  7689253 tctcttttatggtatacttaaccagtgc 7689226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 34 - 188
Target Start/End: Original strand, 30810679 - 30810833
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||    
T  30810679 gggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttat 30810778  T
Q  134 gataataattcccttttatgatatgcttaaccagtgctctagggacaccggttag 188  Q
    | ||||||||  |||||||| |||| ||||||| ||| | ||||  |||||||||    
T  30810779 ggtaataattttcttttatggtatgtttaaccaatgccccaggggtaccggttag 30810833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 34606285 - 34606447
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||   ||||||||||||||||||||||| ||||||||||||||    
T  34606285 gggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgaaattaatttataataaagtcaaaagcagtttccttttat 34606384  T
Q  134 gataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    | |||||||| ||||||||| ||||||||||| |||| |  ||  ||||||||||||| ||||    
T  34606385 ggtaataattaccttttatggtatgcttaacccgtgccccgggagcaccggttagcaggaccc 34606447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 34333294 - 34333469
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||| ||| ||||||||||||||| |||| |||||||||||||||||| | ||||||||||||||| ||| ||||    
T  34333294 aaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaatttataataatgtc-aaaa 34333392  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| |||||||||| ||||||| |||| |||||| |||| |  ||| ||||||||||||| ||||    
T  34333393 cagtttccttttatggtaataattcctttttatggtatgtttaacccgtgccccgggggcaccggttagcaggaccc 34333469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 41 - 165
Target Start/End: Complemental strand, 11686479 - 11686353
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacag--tttccttttatgataa 138  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||  |||  ||||||| |||    
T  11686479 ggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttttttttttatggtaa 11686380  T
Q  139 taattcccttttatgatatgcttaacc 165  Q
    |||||| ||||||||||||||||||||    
T  11686379 taattctcttttatgatatgcttaacc 11686353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 18485971 - 18486142
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| ||||||||||||  |||||||||||||| |||| |||||| ||||||||||| | |||||||||||||||||| |||||    
T  18485971 aaccggtgcccccggggcactggttaaggatattgaaaaggaaattatatagtaattaatgtattgaaattgtgtaattaatttataataaagttaaaaa 18486070  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcag 191  Q
    ||||||||||||||| |||||||| | ||||||| ||||||||||| |||| |    |||||||||||||||    
T  18486071 cagtttccttttatggtaataatttcattttatggtatgcttaacccgtgccccgaagacaccggttagcag 18486142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 36 - 198
Target Start/End: Original strand, 5239311 - 5239473
Alignment:
Q  36 gcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatga 135  Q
    |||| |||||| | ||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| |||||||     
T  5239311 gcactggttaatggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttctttttatgg 5239410  T
Q  136 taataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
    |||||||||||||||||| ||||||||||  |||| |  ||| ||| ||||||||| ||||||    
T  5239411 taataattcccttttatggtatgcttaacttgtgcccccggggcactggttagcaggacccat 5239473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 47839523 - 47839652
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| ||||||||| ||||| | |||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||    
T  47839523 ggttaaggatatgaaaaaggaatttatataatagttaatacattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaata 47839622  T
Q  141 attcccttttatgatatgcttaaccagtgc 170  Q
    ||||||||||||| ||||  ||||||||||    
T  47839623 attcccttttatggtatgaataaccagtgc 47839652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 36 - 164
Target Start/End: Complemental strand, 8754745 - 8754617
Alignment:
Q  36 gcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatga 135  Q
    |||| |||||||||||| ||||| ||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  8754745 gcactggttaaggatatgaaaaatgaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttgttttatgg 8754646  T
Q  136 taataattcccttttatgatatgcttaac 164  Q
    |||||||| ||||||||| ||||||||||    
T  8754645 taataatttccttttatggtatgcttaac 8754617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 28587920 - 28588065
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| || ||| |||||||||||| ||||||||||||||| |||||| |||| ||||||||||| | ||||||||||||||||||||||||    
T  28587920 aaccggtgccccc-ggacactggttaaggatatgaaaaaggaaattatatagtagtcaatgtattgaaattgtgtaattaatttataataaagtcaaaaa 28588018  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaacca 166  Q
    || ||| |||||||| |||||||||||||||||| |||| |||||||    
T  28588019 caattttcttttatggtaataattcccttttatggtatgtttaacca 28588065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 42 - 170
Target Start/End: Complemental strand, 23363321 - 23363193
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    ||||||||||  |||||||||||| || ||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||| |||||     
T  23363321 gttaaggataagaaaaaggaaattgtatagtagttaatgcattgaaattgtgtaattaatttataataaagttaaaaacagtttccttttatggtaatat 23363222  T
Q  142 ttcccttttatgatatgcttaaccagtgc 170  Q
    ||| |||||||| |||| |||||||||||    
T  23363221 ttctcttttatggtatgtttaaccagtgc 23363193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 34 - 170
Target Start/End: Complemental strand, 42044455 - 42044319
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    ||||||||||||| | ||| ||||| ||||||||| ||||||||||  ||||||||||| | ||||||||||||||| |||||||||||||| |||||||    
T  42044455 gggcaccggttaaaggtatgaaaaaagaaattatatagtagttaatagattgaaattgtgtaattaatttataataatgtcaaaaacagttttcttttat 42044356  T
Q  134 gataataattcccttttatgatatgcttaaccagtgc 170  Q
    | |||||||||||||||||| |||| |||||||||||    
T  42044355 ggtaataattcccttttatggtatgtttaaccagtgc 42044319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 46716669 - 46716800
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||| ||||||||||||||||||||| | || |||||||| ||||||| | | |||||||||||||||||||||||| | ||||||||||||||||||    
T  46716669 ggttaaagatataaaaaaggaaattatataatacttaatgcactgaaattatgtaattaatttataataaagtcaaaaatattttccttttatgataata 46716768  T
Q  141 attcccttttatgatatgcttaaccagtgctc 172  Q
    ||||||||||||| |||| |||||| ||||||    
T  46716769 attcccttttatggtatgtttaaccggtgctc 46716800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 34 - 170
Target Start/End: Original strand, 47657004 - 47657138
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| |||||||||||| |||||| |||||||| |||| |||||||||||||||||| | |||||||||||||||||| |||| ||||||  ||||||    
T  47657004 gggcactggttaaggatatgaaaaagaaaattatatagtaattaatgcattgaaattgtgtaattaatttataataaagttaaaagcagttt--ttttat 47657101  T
Q  134 gataataattcccttttatgatatgcttaaccagtgc 170  Q
    | |||||||||||||||||| ||||||||| ||||||    
T  47657102 ggtaataattcccttttatggtatgcttaatcagtgc 47657138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 34 - 170
Target Start/End: Original strand, 1737004 - 1737139
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| |||||||||||| ||||| ||||||||| | |||||||||||||||||| || | ||||||| |||||||||| ||||||| ||||| |||||    
T  1737004 gggcactggttaaggatatgaaaaatgaaattatataatagttaatgcattgaaatagtgtaattaattgataataaagttaaaaacattttccatttat 1737103  T
Q  134 gataataattcccttttatgatatgcttaaccagtgc 170  Q
    |||||||||| | ||||||| ||||||||||||||||    
T  1737104 gataataatt-cattttatggtatgcttaaccagtgc 1737139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 18117175 - 18117303
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    |||||| |||| ||| ||||||||||| ||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||  ||||||  ||||||    
T  18117175 gttaagtatatgaaagaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttttttttatagtaataa 18117274  T
Q  142 ttcccttttatgatatgcttaaccagtgc 170  Q
    || | ||||||| ||||||||||||||||    
T  18117275 tttcattttatggtatgcttaaccagtgc 18117303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 38 - 134
Target Start/End: Complemental strand, 34546472 - 34546376
Alignment:
Q  38 accggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatg 134  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||| ||||||||    
T  34546472 accggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttatagtaaagtcaaaaacagtttacttttatg 34546376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 42 - 170
Target Start/End: Complemental strand, 23357861 - 23357736
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    ||||||||||| |||||| ||||| || |||||||||||||||  |   |||| |||||||||||| ||||||||||||||||||| |||||||||||||    
T  23357861 gttaaggatatgaaaaagaaaattgtatagtagttaatgcatttca---gtataattaatttataaaaaagtcaaaaacagtttccatttatgataataa 23357765  T
Q  142 ttcccttttatgatatgcttaaccagtgc 170  Q
    ||| ||| |||||||||||||||||||||    
T  23357764 ttctcttctatgatatgcttaaccagtgc 23357736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 27456280 - 27456174
Alignment:
Q  29 ccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcct 128  Q
    |||| |||||| ||||||||||||  |||| ||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||    
T  27456280 cccccgggcactggttaaggatatggaaaaagaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaagcagtttcct 27456181  T
Q  129 tttatga 135  Q
    |||||||    
T  27456180 tttatga 27456174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 37631704 - 37631601
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| |||||||||||||||||||||||||||| | || |||||||||| ||||| | | |||||||||||||||| |||||||||||||||||||||    
T  37631704 gggcacgggttaaggatataaaaaaggaaattatataataattaatgcattaaaattatgtaattaatttataataaaatcaaaaacagtttccttttat 37631605  T
Q  134 gata 137  Q
    ||||    
T  37631604 gata 37631601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 60 - 169
Target Start/End: Complemental strand, 37674240 - 37674131
Alignment:
Q  60 gaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatgatatgc 159  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||  | ||   ||||||| |||||    
T  37674240 gaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatgatataattttttttttatggtatgc 37674141  T
Q  160 ttaaccagtg 169  Q
    ||||||||||    
T  37674140 ttaaccagtg 37674131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 5729372 - 5729506
Alignment:
Q  36 gcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatga 135  Q
    |||| |||||||||||| ||||||||||||||| | ||||||||| ||||||||  | | ||||||| |||||||||||||||| | ||| |||||||      
T  5729372 gcactggttaaggatatgaaaaaggaaattatataatagttaatgtattgaaataatgtaattaattgataataaagtcaaaaataattttcttttatag 5729471  T
Q  136 taataattcccttttatgatatgcttaaccagtgc 170  Q
    ||||||||| ||||||||  |||||||||||||||    
T  5729472 taataattctcttttatggcatgcttaaccagtgc 5729506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 28262041 - 28262182
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| || || || |||||||||||||||| ||||||||||||||| ||||||||     |||||||| | | ||||||| |||||||| |||||||    
T  28262041 aaccggtgcctccgggtcaccggttaaggatatgaaaaaggaaattatatagtagtta-----ttgaaattatgtaattaattgataataaaatcaaaaa 28262135  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaacca 166  Q
    ||||||||||||||  |||||||||  ||||||| ||||||||||||    
T  28262136 cagtttccttttatagtaataattcttttttatggtatgcttaacca 28262182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 33636484 - 33636612
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    |||||| |||| |||||| |||||||| | || ||||| |||||||||||| | |||||||||||||||||| ||||| |||||  ||||||| ||||||    
T  33636484 gttaagaatatgaaaaagaaaattatataataattaattcattgaaattgtgtaattaatttataataaagtaaaaaatagtttatttttatggtaataa 33636583  T
Q  142 ttcccttttatgatatgcttaaccagtgc 170  Q
    |||  ||||||| ||||||||||||||||    
T  33636584 ttctattttatggtatgcttaaccagtgc 33636612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 36 - 144
Target Start/End: Complemental strand, 4100684 - 4100577
Alignment:
Q  36 gcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatga 135  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||| ||| ||||| | ||||||||||||||| || |||||||||||||   |||||||    
T  4100684 gcaccggttaaggatatgaaaaaggaaattatatagtaattaatgtattaaaattatgttattaatttataatcaaatcaaaaacagttt-tatttatga 4100586  T
Q  136 taataattc 144  Q
    |||||||||    
T  4100585 taataattc 4100577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 36437390 - 36437507
Alignment:
Q  23 cggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacag 122  Q
    ||||| || ||||| || |||||||||||  ||||||| ||||||| ||||| |||| |||||||||||| | |||||||||||| ||||||||||| ||    
T  36437390 cggtatccacagggtactggttaaggatactaaaaaggtaattatatagtaggtaattcattgaaattgtttaattaatttataa-aaagtcaaaaatag 36437488  T
Q  123 tttccttttatgataataa 141  Q
    ||| |||||||||||||||    
T  36437489 ttttcttttatgataataa 36437507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 34 - 143
Target Start/End: Complemental strand, 18470101 - 18469993
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||||||||||| |||  ||||||||||||||| || ||||||| |||||||||||| | |||||||||| | |||||||||||||||| | ||||||    
T  18470101 gggcaccggttaagcatactaaaaaggaaattatatagcagttaatacattgaaattgtgtaattaatttatga-aaagtcaaaaacagttacattttat 18470003  T
Q  134 gataataatt 143  Q
    | ||||||||    
T  18470002 ggtaataatt 18469993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 22739868 - 22739957
Alignment:
Q  55 aaaaggaaattatacagtagttaatgcattgaaattgtattattaatttat-aataaagtcaaaaacagtttccttttatgataataatt 143  Q
    ||||||||| |||| ||||||||||||||||||||||| | |||||||||| || ||| | ||||||||||| |||||||| ||||||||    
T  22739868 aaaaggaaagtatatagtagttaatgcattgaaattgtgtaattaatttataaaaaaaattaaaaacagttttcttttatggtaataatt 22739957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 29835859 - 29835735
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacag-tttccttttatgataat 139  Q
    |||||| ||||| ||||||||| ||||| | ||||||||| ||| ||||||  | |||||||| ||||||||| |||||||| |||  ||||||| ||||    
T  29835859 ggttaaagatatgaaaaaggaagttatatactagttaatgtattaaaattgcgtaattaatttgtaataaagttaaaaacagttttttttttatggtaat 29835760  T
Q  140 aattcccttttatgatatgcttaac 164  Q
    |||||  ||||||| ||||||||||    
T  29835759 aattctattttatggtatgcttaac 29835735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 3021922 - 3022000
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaac 120  Q
    ||||||| |||| ||||||||||||||| | |||||||| |||||||||||||| |||||||||||| ||||||| ||||    
T  3021922 ggttaagcatattaaaaaggaaattatatactagttaatacattgaaattgtataattaatttataa-aaagtcataaac 3022000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 141
Target Start/End: Original strand, 4087654 - 4087752
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    ||||||| |||  ||||||||||||||| |||||||||||||||||||| || | |||||||||||| |   ||||||||||||| |||||||| |||||    
T  4087654 ggttaagcatactaaaaaggaaattatatagtagttaatgcattgaaatagtgtgattaatttataa-agtttcaaaaacagttt-cttttatggtaata 4087751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 37 - 157
Target Start/End: Complemental strand, 18220597 - 18220479
Alignment:
Q  37 caccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgat 136  Q
    |||||||||||||||  |||||| |||||||| |||| |||||| ||| ||||||| | |||||||||||| |  |||||||||| ||| ||||||| ||    
T  18220597 caccggttaaggatactaaaaagaaaattatatagtaattaatgtattaaaattgtgtaattaatttataa-attgtcaaaaacaattt-cttttataat 18220500  T
Q  137 aataattcccttttatgatat 157  Q
    ||||| | |||||| ||||||    
T  18220499 aataaattccttttttgatat 18220479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 47118100 - 47118041
Alignment:
Q  85 gaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattc 144  Q
    |||||||| | ||||||||||||||||||||| | ||||||||||||||| |||||||||    
T  47118100 gaaattgtgtaattaatttataataaagtcaagagcagtttccttttatggtaataattc 47118041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 20116940 - 20117029
Alignment:
Q  60 gaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattccctttt 150  Q
    ||||||||| |||| |||||||||||||||||| |  | ||||| ||| || | |||||||||||| ||||||||||||||||| ||||||    
T  20116940 gaaattatatagtaattaatgcattgaaattgtgtagtaaatttttaa-aaggccaaaaacagttttcttttatgataataatttcctttt 20117029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 163
Target Start/End: Complemental strand, 18220812 - 18220704
Alignment:
Q  54 aaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatg 153  Q
    ||||||||||||||| |||| |||||| || |||||||| | |||||||||||| || | |||||| ||||| |||||||| |||||| | |||||| ||    
T  18220812 aaaaaggaaattatatagtaattaatgtatagaaattgtgtaattaatttataa-aatggcaaaaatagttttcttttatggtaataaattccttttttg 18220714  T
Q  154 atatgcttaa 163  Q
     ||| |||||    
T  18220713 gtatccttaa 18220704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 152
Target Start/End: Original strand, 13556474 - 13556553
Alignment:
Q  72 tagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttat 152  Q
    |||| |||||||||||||||| | |||||||||||| |||||||| |||| | || ||||||| |||||||| ||||||||    
T  13556474 tagtcaatgcattgaaattgtgtaattaatttataa-aaagtcaataacaatatctttttatggtaataatttccttttat 13556553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 22973622 - 22973667
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaat 79  Q
    |||||| |||||| ||||||||||| ||||||||| ||||||||||    
T  22973622 gggcactggttaatgatataaaaaaagaaattatatagtagttaat 22973667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 38128304 - 38128452
Alignment:
Q  23 cggtacccccagggcaccggttaaggatataaaaaaggaaa-ttatacagtagttaatgcattgaaa-ttgtattattaatttataataaagtcaaaaac 120  Q
    |||| ||||| || |||||||||||||||  |||||||||| |||||   || ||| |||||||||| |||| | |||||| |||||  ||||||| ||     
T  38128304 cggtgcccccgggacaccggttaaggataataaaaaggaaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaa 38128403  T
Q  121 agtttccttttatgataataattcccttttatgatatgcttaaccagtgc 170  Q
    | || ||||||||| ||| |||| |||||| |  ||||||||||||||||    
T  38128404 actt-ccttttatggtaagaatttcctttttttgtatgcttaaccagtgc 38128452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 30924167 - 30924036
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggat-ataaaaaaggaaattatacagtagttaatgcattg-aaattgtattattaatttataataaagtcaaa 117  Q
    ||||||| ||||| |||||| |||||||||| ||||||| ||||||||||   || ||| ||||||| ||||||| | ||||||| ||||  |||||||     
T  30924167 aaccggtgcccccggggcacgggttaaggataataaaaagggaaattatatgttaattagtgcattgaaaattgtttaattaattcataaataagtcaac 30924068  T
Q  118 aacagtttccttttatgataataattccctttt 150  Q
    || |  ||||||||||| ||| |||| ||||||    
T  30924067 aa-aacttccttttatggtaagaatttcctttt 30924036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 2e-56; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 41 - 200
Target Start/End: Original strand, 12356275 - 12356434
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| ||||||||||||||| |||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12356275 ggttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattatataattaatttataataaagtcaaaaacagtttccttttatgataata 12356374  T
Q  141 attcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccatta 200  Q
    |||| |||||||| ||||||||||||||| ||  ||| ||||||||||||| ||||||||    
T  12356375 attctcttttatggtatgcttaaccagtgttccgggggcaccggttagcaggacccatta 12356434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 32202656 - 32202514
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    |||||||  |||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  32202656 aaccggtgtccccggggcacgggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaa 32202557  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaa 163  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  32202556 cagtttccttttatgataataatt-ccttttatgatatgcttaa 32202514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 168
Target Start/End: Complemental strand, 789706 - 789558
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  789706 aaccggtgcccccggggcacgggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 789607  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagt 168  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  789606 cagtttccttttatggtaataattcccttttatggtatgcttaaccagt 789558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 32217063 - 32217204
Alignment:
Q  28 cccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcc 127  Q
    ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||      
T  32217063 cccccggggcactggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttt-t 32217161  T
Q  128 ttttatgataataattcccttttatgatatgcttaaccagtgc 170  Q
    |||||||||||||||||||||||||| ||||||||||| ||||    
T  32217162 ttttatgataataattcccttttatggtatgcttaacctgtgc 32217204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 43944517 - 43944686
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| || || |||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  43944517 aaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 43944616  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||||||| | |||| ||||||||||||    
T  43944617 cagtttccttttatggtaataattcccttgtatggtatgcttaaccagtgcccgaggg-caccggttagca 43944686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 54897318 - 54897496
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||||||| | ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54897318 aaccggtgcccccggggcactggttaaggatatgagaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaaa 54897417  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
    || |||||||||||| |||||||| ||||||||| |||| ||||||||||  |  | | ||||||||||||| ||||||    
T  54897418 caatttccttttatggtaataatttccttttatggtatgtttaaccagtgtcccggaggcaccggttagcaggacccat 54897496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 49 - 196
Target Start/End: Original strand, 36395138 - 36395285
Alignment:
Q  49 atataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattccctt 148  Q
    |||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  36395138 atatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaagcagttttcttttatgataataattccctt 36395237  T
Q  149 ttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||| |||||||||||||||| || ||| |||| |||||||| ||||    
T  36395238 ttatggtatgcttaaccagtgccctgggggcaccagttagcaggaccc 36395285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 54656038 - 54655882
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| | |||||||||||||||||||||||||| ||| ||||||     
T  54656038 gggcactggttaaggatataaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttag 54655939  T
Q  134 gataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcag 191  Q
    ||||||||||| || ||||||||||||||||||||| ||  ||| |||||||||||||    
T  54655938 gataataattctctcttatgatatgcttaaccagtg-tcccggggcaccggttagcag 54655882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 16536058 - 16536234
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| | |||||| ||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  16536058 aaccggtgcccccggggcacggattaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 16536157  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| |||||||||  ||||||| ||| |||||||||||| |  ||| ||||||||||||| ||||    
T  16536158 cagtttccttttatggtaataattctattttatggtattcttaaccagtgccccgggggcaccggttagcaggaccc 16536234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 28 - 196
Target Start/End: Original strand, 29591207 - 29591375
Alignment:
Q  28 cccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcc 127  Q
    ||||| |||||| ||||||| |||| || |||||||||||| ||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||    
T  29591207 cccccggggcactggttaagaatatgaataaggaaattatatagtagttaatgcattgaaattgtgtacttaatttataataaagtcaaaaacagtttcc 29591306  T
Q  128 ttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||| |||||||| ||||||||| |||||||||| ||||| |  ||| ||||||||||||| ||||    
T  29591307 ttttatggtaataattaccttttatggtatgcttaactagtgccccgggggcaccggttagcaggaccc 29591375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 4268998 - 4268820
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||| ||| |||||||||| |||| ||||||||||||||||||||| | | ||||||||||||||| ||||||||    
T  4268998 aaccggtgcccccggggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaattatgtaattaatttataataatgtcaaaaa 4268899  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
    ||||||| ||||||| |||||||||||||||||| |||| ||||||||||| |   || ||||||||||||| ||||||    
T  4268898 cagtttctttttatggtaataattcccttttatggtatgattaaccagtgccccgagggcaccggttagcaggacccat 4268820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 4089152 - 4089328
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||  |||||| | |||||| ||| |||||| |||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  4089152 aaccggtgcccctggggcactgattaagggtatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaa 4089251  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| ||||||||| |||||||| |||| ||||||||||| | |||| |||| |||||||| ||||    
T  4089252 cagtttccttttatggtaataattctcttttatggtatgtttaaccagtgccccaggggcaccagttagcaggaccc 4089328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 34 - 189
Target Start/End: Original strand, 50619110 - 50619264
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| | ||||| |||| |||||| |||||||| ||||||||||||||||||||||| |  ||||||||||||||||| |||||||||||||||||||    
T  50619110 gggcactgattaagaatatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtacttaatttataataaagtaaaaaacagtttccttttat 50619209  T
Q  134 gataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagc 189  Q
    | |||||||||||||||||| |||||||||||||||| | |||| |||||||||||    
T  50619210 ggtaataattcccttttatggtatgcttaaccagtgc-ccaggggcaccggttagc 50619264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 31 - 166
Target Start/End: Complemental strand, 42898911 - 42898774
Alignment:
Q  31 ccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttt 130  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| |||    
T  42898911 ccagggcactggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaatagtttctttt 42898812  T
Q  131 ta--tgataataattcccttttatgatatgcttaacca 166  Q
    ||  || ||||||||| |||||||| ||||||||||||    
T  42898811 tatgtggtaataattctcttttatggtatgcttaacca 42898774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 7768951 - 7769124
Alignment:
Q  23 cggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacag 122  Q
    |||||||||| |||||| |||||||| ||| ||||||||||||||| ||||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  7768951 cggtacccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgttaaaaacag 7769050  T
Q  123 tttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||||||||||| ||||||||| ||||||||  || ||||||| |||| |  ||| ||||||||||||| ||||    
T  7769051 tttccttttatggtaataattctcttttatggcatacttaacccgtgccccgggggcaccggttagcaggaccc 7769124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 34 - 198
Target Start/End: Original strand, 6164118 - 6164281
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| |||||||||||| |||| | |||||||| ||||||||||||||||||||||| | |||||||||||||||||  |||||||||||||||||||    
T  6164118 gggcactggttaaggatatcaaaa-gaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagcaaaaaacagtttccttttat 6164216  T
Q  134 gataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccat 198  Q
    | ||||||||| |||||||| |||||||||||||| | |   |||||||||||||||| ||||||    
T  6164217 ggtaataattctcttttatggtatgcttaaccagtaccccgaggacaccggttagcaggacccat 6164281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 60 - 196
Target Start/End: Complemental strand, 30387270 - 30387134
Alignment:
Q  60 gaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatgatatgc 159  Q
    ||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  30387270 gaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcctttttatgatatgc 30387171  T
Q  160 ttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||| || | | || |  |||||||||||||||||||    
T  30387170 ttaatcaataccctggaaacaccggttagcagaaccc 30387134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 33108848 - 33108673
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| || || |||||| ||||||| |||| ||||||||||||||| | |||||||||||||||||| |||| ||||||| ||||||||||||||||    
T  33108848 aaccggtgcctccggggcactggttaag-atatgaaaaaggaaattatataatagttaatgcattgaaatagtataattaattgataataaagtcaaaaa 33108750  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||| |||| |  | | ||||||||||||| ||||    
T  33108749 cagtttccttttatggtaataattcctttttatggtatgcttaacccgtgccccggaggcaccggttagcaggaccc 33108673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 19503260 - 19503137
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| ||||||||||||||| | |||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||  |||||    
T  19503260 ggttaaggatatgaaaaaggaaattatatactagttaatacattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttattgtaata 19503161  T
Q  141 attcccttttatgatatgcttaac 164  Q
    ||||||||||||| ||||||||||    
T  19503160 attcccttttatggtatgcttaac 19503137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 18068055 - 18067885
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||| ||| ||||||||||||||| ||||||||||||||| ||||||| | |||||||||| |||| ||||||||    
T  18068055 aaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttatcataatgtcaaaaa 18067956  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
     |||||||||||||| |||||||||||||||||| |||| |||||| || | |  ||| ||||||||||||    
T  18067955 tagtttccttttatggtaataattcccttttatggtatgtttaacccgttccccgggggcaccggttagca 18067885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 47232048 - 47231902
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| | |||| |||||||||| | ||||||||||||||| | ||||||||||||||||||  | | ||||||| ||||||||||||||||    
T  47232048 aaccggtgcccccggagcactggttaaggatgtgaaaaaggaaattatataatagttaatgcattgaaataatgtaattaattgataataaagtcaaaaa 47231949  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaacca 166  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||    
T  47231948 cagtttccttttatgataataattcccttttatggtatgtttaacca 47231902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 52533961 - 52533791
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| || ||||| ||| ||||||| |||| ||||||||||||||| ||||||||||||| |||||||| || ||||||| ||||||||||| ||||    
T  52533961 aaccggtgcctccaggacactggttaagaatatgaaaaaggaaattatatagtagttaatgcactgaaattgaataattaattgataataaagtcgaaaa 52533862  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
    ||||||||||||||| |||||||||||||||||| |||| ||||||  | ||| || ||||| ||||||||    
T  52533861 cagtttccttttatggtaataattcccttttatggtatgtttaacccatactccagagacacaggttagca 52533791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 34 - 200
Target Start/End: Complemental strand, 54945940 - 54945776
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| |||||||||||| ||||||||||||||| || |||||||| ||||||||||| | |||||||||||||||||||||||||| |||| ||||||    
T  54945940 gggcactggttaaggatatgaaaaaggaaattatatagcagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaatttcgttttat 54945841  T
Q  134 gataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccatta 200  Q
    | | |||||||| ||||||| ||| ||||||||||||||  || |||||||||||||| ||||||||    
T  54945840 ggt-ataattcctttttatggtatacttaaccagtgctc-cggaacaccggttagcaggacccatta 54945776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 20 - 153
Target Start/End: Original strand, 15186253 - 15186386
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||| ||| ||||||||||||||| |||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  15186253 aaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatccattgaaattgtgtaattaatttataataatgtcaaaaa 15186352  T
Q  120 cagtttccttttatgataataattcccttttatg 153  Q
    ||||||||||||||| |||||||||| |||||||    
T  15186353 cagtttccttttatggtaataattccattttatg 15186386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 43202559 - 43202384
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| ||||||  ||||||| ||| ||||||||||||||| |||| |||||||||| ||||||| | ||||||||||||||| ||||||||    
T  43202559 aaccggtgcccccggggcactagttaagggtatgaaaaaggaaattatatagtaattaatgcattaaaattgtgtaattaatttataataatgtcaaaaa 43202460  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    |||||| |||||||| ||||||||| |||||||| || ||||||||||||| |  ||| ||||||||||||| ||||    
T  43202459 cagttttcttttatggtaataattctcttttatggtaagcttaaccagtgc-ccgggggcaccggttagcaggaccc 43202384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 3783677 - 3783534
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| || || |||||||||||||  |||| ||||| ||||||||| ||||||||||||||| ||||||| | ||||||| ||||||||||||||||    
T  3783677 aaccggtgcctccggggcaccggttaaacatatgaaaaatgaaattatatagtagttaatgcattaaaattgtttaattaattgataataaagtcaaaaa 3783578  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaa 163  Q
    |||||| |||||||| |||||||||||||||||| |||||||||    
T  3783577 cagttttcttttatggtaataattcccttttatggtatgcttaa 3783534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 41 - 164
Target Start/End: Original strand, 4220226 - 4220348
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| ||||||||||||||| ||||||||||| ||||||||||| | |||||||||||||||||||||||||| ||| |||||||| |||||    
T  4220226 ggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatg-taata 4220324  T
Q  141 attcccttttatgatatgcttaac 164  Q
    ||||||||||||| ||||||||||    
T  4220325 attcccttttatggtatgcttaac 4220348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 28755640 - 28755774
Alignment:
Q  30 cccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcctt 129  Q
    |||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||| |||||||||| | |||||||||||||    
T  28755640 cccagggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagttagaaacagtttcctt 28755739  T
Q  130 ttatgataataattcccttttatgatatgcttaacc 165  Q
    ||||||||||| || ||||||||  |||||||||||    
T  28755740 ttatgataatactt-ccttttatagtatgcttaacc 28755774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 39843938 - 39844060
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||| |||||    
T  39843938 ggttaaggatatgaaaaatgaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagtttccttttatggtaata 39844037  T
Q  141 attcccttttatgatatgcttaa 163  Q
    ||||| ||||| | |||||||||    
T  39844038 attcctttttagggtatgcttaa 39844060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 34 - 168
Target Start/End: Complemental strand, 24679804 - 24679671
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttat 133  Q
    |||||| |||||||||||| ||||| ||||||||| ||||||||||| ||||||||||| | |||||||||||||||||| ||||||| ||||| |||||    
T  24679804 gggcactggttaaggatatgaaaaaagaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagttaaaaacaatttcc-tttat 24679706  T
Q  134 gataataattcccttttatgatatgcttaaccagt 168  Q
    | ||||||||| |||||||| ||||||||| ||||    
T  24679705 ggtaataattctcttttatggtatgcttaatcagt 24679671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 48 - 170
Target Start/End: Complemental strand, 30154311 - 30154189
Alignment:
Q  48 gatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattccct 147  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||| | | |||||||||||||||| ||||||||| ||||||| |||||||||||||| ||    
T  30154311 gatatgaaaaaggaaattatatagtagttaatgtattgaaattatgtaattaatttataataaaatcaaaaacaatttccttatatgataataattctct 30154212  T
Q  148 tttatgatatgcttaaccagtgc 170  Q
    |||||| | ||||||||||||||    
T  30154211 tttatggtgtgcttaaccagtgc 30154189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 41 - 166
Target Start/End: Original strand, 37987966 - 37988091
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||| ||| ||||||||||||||| ||||||||||| ||||||||||| | ||||||||||||||| || |||||||||||||||||||  |||||    
T  37987966 ggttaagggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgttaaaaacagtttccttttattgtaata 37988065  T
Q  141 attcccttttatgatatgcttaacca 166  Q
    |||| |||||||  ||||||||||||    
T  37988066 attctcttttatagtatgcttaacca 37988091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 41 - 165
Target Start/End: Complemental strand, 31680618 - 31680494
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||| ||| |||||| || ||| | | ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||    
T  31680618 ggttaagggtatgaaaaagaaagttacataatagttaatgcattgaaattgtataattaatttataataaagtcaaaaacaatttccttttatggtaata 31680519  T
Q  141 attcccttttatgatatgcttaacc 165  Q
    ||||  |||||||||||| ||||||    
T  31680518 attcatttttatgatatgtttaacc 31680494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 199
Target Start/End: Complemental strand, 5091786 - 5091609
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||||| ||| |||||| ||||||| |||| |||||  |||||||| | || |||||  ||| ||||||| | |||||||||||||||||||| |||    
T  5091786 aaccggtactcccggggcactggttaagaatatgaaaaataaaattatataataattaatatattaaaattgtgtaattaatttataataaagtcataaa 5091687  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccatt 199  Q
    ||||||||||||||  |||||||||||||||||| ||||||||||||||| ||  ||  ||||||||||||| |||||||    
T  5091686 cagtttccttttatagtaataattcccttttatg-tatgcttaaccagtg-tccgggagcaccggttagcaggacccatt 5091609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 44 - 169
Target Start/End: Original strand, 46148973 - 46149098
Alignment:
Q  44 taaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataatt 143  Q
    |||| |||| ||||||||||||||| | || ||||| |||||||||||| | |||||||||||||||||||||||||| |||| ||||||| ||||||||    
T  46148973 taagaatatgaaaaaggaaattatataataattaatacattgaaattgtgtaattaatttataataaagtcaaaaacaatttctttttatggtaataatt 46149072  T
Q  144 cccttttatgatatgcttaaccagtg 169  Q
    | |||||||| |||| ||||||||||    
T  46149073 ctcttttatggtatgtttaaccagtg 46149098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 54054558 - 54054672
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||  ||||||||||||||||||| ||||| ||||||||| | |||||||||||||||||| || | ||||||| ||||||||||||||||    
T  54054558 aaccggtgccccgggggcaccggttaaggatatgaaaaaagaaattatataatagttaatgcattgaaatagtgtaattaattgataataaagtcaaaaa 54054657  T
Q  120 cagtttccttttatg 134  Q
    || ||||||||||||    
T  54054658 caatttccttttatg 54054672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 49915192 - 49915301
Alignment:
Q  43 ttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataat 142  Q
    |||||||||| |||||| || ||||| |||| |||||| ||||||||||| | |||||||||||||||||| ||||||||||||||||||| ||||||||    
T  49915192 ttaaggatatgaaaaagaaatttatatagtaattaatgtattgaaattgtgtaattaatttataataaagtaaaaaacagtttccttttataataataat 49915291  T
Q  143 tcccttttat 152  Q
    | ||||||||    
T  49915292 ttccttttat 49915301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 55882716 - 55882842
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    ||||||||||| |||||  |||||||| |||| |||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||| ||| ||    
T  55882716 gttaaggatatgaaaaaa-aaattatatagtaattaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaa-aa 55882813  T
Q  142 ttcccttttatgatatgcttaaccagtgc 170  Q
    ||| |||||||| ||| ||||||| ||||    
T  55882814 ttcacttttatggtatacttaacccgtgc 55882842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 70 - 196
Target Start/End: Original strand, 16820912 - 16821038
Alignment:
Q  70 agtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatgatatgcttaaccagtg 169  Q
    |||| |||||||||||||||| | | ||||| |||||||||||||| |  ||||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  16820912 agtaattaatgcattgaaattctgtaattaacttataataaagtcatacgcagtttccttttatggtaataatttccttttatggtatgcttaaccagtg 16821011  T
Q  170 ctctagggacaccggttagcagaaccc 196  Q
    | |  ||| ||||||||||||| ||||    
T  16821012 ccccgggggcaccggttagcaggaccc 16821038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 46688345 - 46688267
Alignment:
Q  56 aaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatg 134  Q
    |||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||    
T  46688345 aaagaaaattatacagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaagcagtttccttttatg 46688267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 50603272 - 50603386
Alignment:
Q  55 aaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacag-tttccttttatgataataattcccttttatg 153  Q
    ||||||||||| || | || |||||||||||||||||| | ||||||||||||||| ||||||||||| |||  ||||||||||||||||| ||||||||    
T  50603272 aaaaggaaattgtataataattaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagttttttttttatgataataattctcttttatg 50603371  T
Q  154 atatgcttaaccagt 168  Q
     ||||||||||||||    
T  50603372 gtatgcttaaccagt 50603386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 42 - 170
Target Start/End: Complemental strand, 53656032 - 53655904
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    ||||||||||| ||||| ||||||||| | ||||||||| ||||||||||| | |||||||||||||||||| ||||| | |||  ||||||| ||||||    
T  53656032 gttaaggatatgaaaaaagaaattatataatagttaatgtattgaaattgtgtaattaatttataataaagttaaaaataattttattttatggtaataa 53655933  T
Q  142 ttcccttttatgatatgcttaaccagtgc 170  Q
    || | ||||||| ||||||||| ||||||    
T  53655932 tttcattttatggtatgcttaatcagtgc 53655904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 74 - 170
Target Start/End: Complemental strand, 39877371 - 39877273
Alignment:
Q  74 gttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatg--atatgcttaaccagtgc 170  Q
    ||||||| ||||||||||| | ||||||||||||||||||||||||||||||| ||||||  ||||||||| ||||||||  |||||||||||||||||    
T  39877371 gttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttcattttatagtaataattctcttttatggtatatgcttaaccagtgc 39877273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 42815140 - 42815234
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttc-cttttatg 134  Q
    |||||||||||| |||||||||||||||   ||||||||| ||||||||| | | ||||||||||||||||||||||||||||||| ||||||||    
T  42815140 ggttaaggatatgaaaaaggaaattatatcatagttaatgtattgaaattatgtaattaatttataataaagtcaaaaacagtttctcttttatg 42815234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 40 - 169
Target Start/End: Original strand, 52697082 - 52697210
Alignment:
Q  40 cggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataat 139  Q
    ||||||||||||| |||||  |||||||| |||||||||| |||| ||||| ||| || ||||||||||||||||||||| | ||| | |||||  ||||    
T  52697082 cggttaaggatatgaaaaacaaaattatatagtagttaatacattaaaattatataat-aatttataataaagtcaaaaataattttcctttattgtaat 52697180  T
Q  140 aattcccttttatgatatgcttaaccagtg 169  Q
    ||||| ||||||||||||| ||||| ||||    
T  52697181 aattctcttttatgatatgtttaacgagtg 52697210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 53004056 - 53003956
Alignment:
Q  96 attaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacc 195  Q
    |||||| ||||||||||||||||| | ||||||||||  |||||||||| |||||||||||||||||| |||||  |  ||||||||||||||||| |||    
T  53004056 attaatgtataataaagtcaaaaataatttccttttaaaataataattctcttttatgatatgcttaatcagtgtccccgggacaccggttagcaggacc 53003957  T
Q  196 c 196  Q
    |    
T  53003956 c 53003956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 53268764 - 53268875
Alignment:
Q  54 aaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatg 153  Q
    ||||| ||||||||| | ||||||||||||| ||||||| | |||||||||||| ||||||||||||| ||| ||||||| |||||||||  ||||| ||    
T  53268764 aaaaaagaaattatatattagttaatgcattaaaattgtgtaattaatttataa-aaagtcaaaaacaattttcttttataataataattttcttttttg 53268862  T
Q  154 atatgcttaacca 166  Q
     ||||||||||||    
T  53268863 gtatgcttaacca 53268875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 170
Target Start/End: Original strand, 41265510 - 41265618
Alignment:
Q  61 aaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatgatatgct 160  Q
    |||||||| ||||||||||||| ||||||||| | |||||||||||| ||| ||||||||||||| |||||||  ||||||||  ||||| || |||| |    
T  41265510 aaattatatagtagttaatgcagtgaaattgtgtaattaatttataa-aaaatcaaaaacagttttcttttattgtaataattttcttttttggtatgtt 41265608  T
Q  161 taaccagtgc 170  Q
    ||||||||||    
T  41265609 taaccagtgc 41265618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 168
Target Start/End: Complemental strand, 1432703 - 1432576
Alignment:
Q  35 ggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatg 134  Q
    ||||| |||||||||||| ||||||||||||||| | |||||||| |||||  |       |||||||||||||||| | ||||||||||| ||||||||    
T  1432703 ggcactggttaaggatatgaaaaaggaaattatataatagttaatacattgtga-------attaatttataataaaataaaaaacagttt-cttttatg 1432612  T
Q  135 ataat--aattcccttttatgatatgcttaaccagt 168  Q
    |||||  ||||| ||||||| |||||||||||||||    
T  1432611 ataataaaattctcttttataatatgcttaaccagt 1432576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 62 - 170
Target Start/End: Original strand, 31517217 - 31517326
Alignment:
Q  62 aattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagt-ttccttttatgataataattcccttttatgatatgct 160  Q
    ||||||| | |||||||||||||||||| || | ||||||| |||||||||||||||| | | ||  ||||||| ||||||||| ||| |||| ||||||    
T  31517217 aattatataatagttaatgcattgaaatagtgtaattaattgataataaagtcaaaaataatgttttttttatggtaataattctcttatatggtatgct 31517316  T
Q  161 taaccagtgc 170  Q
    ||||||||||    
T  31517317 taaccagtgc 31517326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 8133793 - 8133862
Alignment:
Q  96 attaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatgatatgcttaacca 166  Q
    |||||||||||||||||||||||| ||||| |||||||| ||||||||  |||||||| |||| |||||||    
T  8133793 attaatttataataaagtcaaaaatagttttcttttatggtaataattatcttttatg-tatgtttaacca 8133862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 50167615 - 50167685
Alignment:
Q  34 gggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttata 106  Q
    |||||| |||||| ||||| |||||| ||||||||  |||||||||||||||||||||| | |||||||||||    
T  50167615 gggcactggttaaagatatgaaaaagaaaattata--gtagttaatgcattgaaattgtgtaattaatttata 50167685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 141
Target Start/End: Complemental strand, 17344813 - 17344714
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    ||||||| |||  ||||| ||||||||| | ||||||||||||| ||||| ||| ||||| |||||| ||| | ||||| |||||| ||||||| |||||    
T  17344813 ggttaagtataataaaaatgaaattatataatagttaatgcatttaaattatataattaaattataa-aaatttaaaaaaagtttctttttatggtaata 17344715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 46688265 - 46688225
Alignment:
Q  155 tatgcttaaccagtgctctagggacaccggttagcagaacc 195  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  46688265 tatgcttaaccagtgctctgggggcaccggttagcagaacc 46688225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 190
Target Start/End: Complemental strand, 28120069 - 28119912
Alignment:
Q  34 gggcaccggttaaggat-ataaaaaaggaaattatacagtagttaatgcattg-aaattgtattattaatttataataaagtcaaaaacagtttcctttt 131  Q
    ||||||||||||||||| |||||||  |||||||||   || ||| ||||||| ||||||| | ||||||  ||||  ||||||| || |  ||||||||    
T  28120069 gggcaccggttaaggataataaaaagagaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaa-aacttcctttt 28119971  T
Q  132 atgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
    ||| ||| |||| |||||| |  |||||||||||||||| |  | ||||||||||||||    
T  28119970 atggtaagaatttcctttttttgtatgcttaaccagtgccccggagacaccggttagca 28119912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 170
Target Start/End: Original strand, 20654698 - 20654836
Alignment:
Q  34 gggcaccggttaaggata-taaaaaaggaaattatacagtagttaatgcattg-aaattgtattattaatttataataaagtcaaaaacagtttcctttt 131  Q
    |||||||| |||| |||| ||||||||||||||||| ||||| || ||||||| ||||||| | ||||||  |||| ||||||||||| |||||| ||||    
T  20654698 gggcaccgtttaatgatactaaaaaaggaaattatagagtagctattgcattgaaaattgtgtaattaatcaataa-aaagtcaaaaa-agtttcatttt 20654795  T
Q  132 atga-taataa-ttcccttttatgatatgcttaaccagtgc 170  Q
     | | |||||| |||| |||| || ||| ||||||||||||    
T  20654796 tttagtaataacttcctttttttggtatccttaaccagtgc 20654836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 22971 - 23141
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| | |||| |||||||||||| ||||||||||||||| |||| ||||| |||||||||||| | ||||||||||||||||||||||||    
T  22971 aaccggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtaattaatacattgaaattgtgtaattaatttataataaagtcaaaaa 23070  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
    ||||||||||||||| ||||||||| |||||||| |||| ||||||||||| | | |||||||||||||||    
T  23071 cagtttccttttatgttaataattctcttttatggtatgtttaaccagtgccccaaggacaccggttagca 23141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 20 - 170
Target Start/End: Original strand, 14906 - 15056
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    |||||||  |||| |||||| |||||| ||||||||||| ||||||||| ||||||||||||| ||||||||| |  |||||||||||||||||||||||    
T  14906 aaccggtgtccccggggcactggttaaagatataaaaaaagaaattatatagtagttaatgcactgaaattgtgtagttaatttataataaagtcaaaaa 15005  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgc 170  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  15006 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgc 15056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 96; Significance: 7e-47; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 42 - 189
Target Start/End: Original strand, 857 - 1004
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| || |||||||||||  ||||||    
T  857 gttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaatcaatttccttttatagtaataa 956  T
Q  142 ttcccttttatgatatgcttaaccagtgctctagggacaccggttagc 189  Q
    ||| |||||||| |||||||||||||||| ||| ||||||||||||||    
T  957 ttctcttttatggtatgcttaaccagtgccctaaggacaccggttagc 1004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 36 - 206
Target Start/End: Original strand, 40945 - 41115
Alignment:
Q  36 gcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatga 135  Q
    |||||| ||||| |||| ||||| ||||||||| | ||||||||||||||||||| | | ||||||||||||| ||||||||||||||||||||||||||    
T  40945 gcaccgattaagaatatgaaaaatgaaattatataatagttaatgcattgaaattatgtaattaatttataatgaagtcaaaaacagtttccttttatga 41044  T
Q  136 taataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaacccattagttaat 206  Q
    |||||||| |||||||||||||||||||||||||  |  | |||||||||| |||| |||||||| |||||    
T  41045 taataatttccttttatgatatgcttaaccagtgtcccggagacaccggttggcaggacccattaattaat 41115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 6286 - 6110
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||  |||||| |||||||||||| |||||||||| |||| |||||||||||||||| |||||| | ||||| ||||||||||||||||||    
T  6286 aaccggtgcccctggggcactggttaaggatatgaaaaaggaaactatatagtagttaatgcattggaattgtgtaattaaattataataaagtcaaaaa 6187  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagcagaaccc 196  Q
    ||||||||||||||| ||||||| |||||||||| |||| |||||| |||| |  ||| ||||||||||||| ||||    
T  6186 cagtttccttttatggtaataatccccttttatggtatgtttaacccgtgccccgggggcaccggttagcaggaccc 6110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 53861 - 53691
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| ||||| |||||| |||||||| ||| ||||||||||||||| ||||||||||||||| ||||||| | |||||||||| |||| ||||||||    
T  53861 aaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttatcataatgtcaaaaa 53762  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
     |||||||||||||| |||||||||||||||||| |||| |||||| || | |  ||| ||||||||||||    
T  53761 tagtttccttttatggtaataattcccttttatggtatgtttaacccgttccccgggggcaccggttagca 53691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 50558 - 50710
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| || || |||||| |||||| ||||| ||||||||||||||| |||||||||||  |||||||||||| |||||||||||||||||||||||     
T  50558 aaccggtgcctccggggcactggttaaagatatgaaaaaggaaattatatagtagttaatgttttgaaattgtataattaatttataataaagtcaaaat 50657  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaaccagtgctc 172  Q
    || ||| |||||||||||||||||| |||||||  |||| |||||||||||||    
T  50658 caattttcttttatgataataattctcttttatagtatgtttaaccagtgctc 50710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 53501 - 53421
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaaca 121  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  53501 ggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaaaca 53421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 691 - 832
Alignment:
Q  23 cggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacag 122  Q
    |||| ||||||| |||| |||||| ||||| ||||||||||||||| |||||||||| |||||||||||| | ||||||||||||||||||||||||| |    
T  691 cggtgcccccagagcacgggttaaagatatgaaaaaggaaattatatagtagttaatccattgaaattgtgtaattaatttataataaagtcaaaaactg 790  T
Q  123 tttccttttatgataataattcccttttatgatatgcttaac 164  Q
    ||| |||||||| | ||||||| |||||||| ||||||||||    
T  791 ttttcttttatggtgataattctcttttatggtatgcttaac 832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 71 - 200
Target Start/End: Original strand, 10771 - 10900
Alignment:
Q  71 gtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatgatatgcttaaccagtgc 170  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||    
T  10771 gtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccatttatggtatgcttaaccagtgc 10870  T
Q  171 tctagggacaccggttagcagaacccatta 200  Q
        ||| || |||||||||| ||||||||    
T  10871 ctcgggggcagcggttagcaggacccatta 10900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 28 - 168
Target Start/End: Complemental strand, 68458 - 68318
Alignment:
Q  28 cccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcc 127  Q
    ||||| |||||| |||||||||||| ||||| ||||||||| ||||||||||||||| ||||||| | | ||| |||||||||||| |||| ||||||||    
T  68458 cccccggggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcattaaaattgtgtaaataaattataataaagttaaaatcagtttcc 68359  T
Q  128 ttttatgataataattcccttttatgatatgcttaaccagt 168  Q
    ||||| | |||||||||||||||||| ||||||||||||||    
T  68358 ttttaaggtaataattcccttttatggtatgcttaaccagt 68318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 29 - 168
Target Start/End: Original strand, 311 - 450
Alignment:
Q  29 ccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcct 128  Q
    ||||||||||| ||||||| |||| |||||| |||||||| | ||||||||||||||||||||| | || ||||||||||||||||||||||||||||||    
T  311 ccccagggcactggttaagcatatgaaaaagaaaattatataatagttaatgcattgaaattgtgtaataaatttataataaagtcaaaaacagtttcct 410  T
Q  129 tttatgataataattcccttttatgatatgcttaaccagt 168  Q
    | || | ||||||||| ||||||||||||| |||| ||||    
T  411 tctacggtaataattctcttttatgatatgattaatcagt 450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 19752 - 19612
Alignment:
Q  29 ccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcct 128  Q
    ||||||||||  ||||||| |||| ||||| ||||||||| | || |||||||||||||||||| | || ||||||||||||||||||||||||||||||    
T  19752 ccccagggcatgggttaagcatatgaaaaaagaaattatataataattaatgcattgaaattgtgtaatgaatttataataaagtcaaaaacagtttcct 19653  T
Q  129 tttatgataataattcccttttatgatatgcttaaccagtg 169  Q
    |||| ||||||| ||| ||||||||||||| |||| |||||    
T  19652 tttacgataatagttctcttttatgatatgattaatcagtg 19612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 8064 - 7959
Alignment:
Q  29 ccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcct 128  Q
    |||| |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||| |||||||||||| ||||||||||||    
T  8064 cccccgggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttcct 7965  T
Q  129 tttatg 134  Q
    ||||||    
T  7964 tttatg 7959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 29 - 134
Target Start/End: Original strand, 7307 - 7412
Alignment:
Q  29 ccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttcct 128  Q
    |||| |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||| |||||||||||| ||||||||||||    
T  7307 cccccgggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttcct 7406  T
Q  129 tttatg 134  Q
    ||||||    
T  7407 tttatg 7412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 41 - 169
Target Start/End: Original strand, 25750 - 25877
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataata 140  Q
    |||||||||||| ||||||||| ||||| |||| |||||| ||||||||||| | |||||||||||||||||||||||||| ||| |||||||| |||||    
T  25750 ggttaaggatatgaaaaaggaa-ttatatagtaattaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaata 25848  T
Q  141 attcccttttatgatatgcttaaccagtg 169  Q
    ||||||||||||| ||| ||||| |||||    
T  25849 attcccttttatggtatccttaaacagtg 25877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 17619 - 17502
Alignment:
Q  47 ggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattccc 146  Q
    |||||| |||||| |||||||| ||||| |||||||||||||||||   |||||||||||||||||||||||||||||| |||||||||||||||||||     
T  17619 ggatatgaaaaagaaaattatatagtagctaatgcattgaaattgtga-attaatttataataaagtcaaaaacagttttcttttatgataataattcct 17521  T
Q  147 ttttatgatatgcttaacc 165  Q
    ||||||| |||| ||||||    
T  17520 ttttatggtatgtttaacc 17502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 147059 - 146933
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    ||||||||||| ||||||||||||||| |||||||||| |||||||||||| | ||||||| |||||||||||||||||||||| || ||| | ||||||    
T  147059 gttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaattgataataaagtcaaaaacagttttctattacggtaataa 146960  T
Q  142 ttcccttttatgatatgcttaaccagt 168  Q
    || | ||||||| ||||||||| ||||    
T  146959 tttctttttatggtatgcttaatcagt 146933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 95760 - 95616
Alignment:
Q  20 aaccggtacccccagggcaccggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaa 119  Q
    ||||||| |||||  || || ||||||| |||| ||||||||||||||| | || |||||| ||||||||| | | ||||||||||||||||||| ||||    
T  95760 aaccggtgcccccgaggtactggttaagaatatgaaaaaggaaattatataataattaatgaattgaaattatgtaattaatttataataaagtc-aaaa 95662  T
Q  120 cagtttccttttatgataataattcccttttatgatatgcttaacc 165  Q
    |||||| |||||||| |||||||||||||||||| |||| ||||||    
T  95661 cagttttcttttatggtaataattcccttttatggtatgtttaacc 95616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 75 - 196
Target Start/End: Original strand, 233918 - 234039
Alignment:
Q  75 ttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatgatatgcttaaccagtgctcta 174  Q
    ||||| |||||||||||| | ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||| |||| |||||| || |||      
T  233918 ttaattcattgaaattgtgtaattaatttataataaagtcaaaagcagtttccttttatgaaaataatttccttttatggtatgtttaaccggtactccg 234017  T
Q  175 gggacaccggttagcagaaccc 196  Q
    ||| ||||||||||||| ||||    
T  234018 ggggcaccggttagcaggaccc 234039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 11125 - 11032
Alignment:
Q  41 ggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatg 134  Q
    |||||||||||| ||||||||||||||| | ||||||||||||||||||||| | |||||  |||||||||||||||||||||||| |||||||    
T  11125 ggttaaggatatgaaaaaggaaattatatattagttaatgcattgaaattgtgtaattaaactataataaagtcaaaaacagtttcattttatg 11032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 69258 - 69385
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    ||||||||||| |||||| |||||||| |||||||||| |||| ||||| | | ||||||||||||||||||||||| ||||||  ||||| | ||||||    
T  69258 gttaaggatatgaaaaagtaaattatatagtagttaatacattaaaattatgtaattaatttataataaagtcaaaagcagtttttttttaaggtaataa 69357  T
Q  142 ttcccttttatgatatgcttaaccagtgc 170  Q
    ||  |||||||| ||||||||||||||||    
T  69358 tt-tcttttatggtatgcttaaccagtgc 69385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 190
Target Start/End: Complemental strand, 33835 - 33689
Alignment:
Q  42 gttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    |||||| |||| |||| |||||||||| | |||||||| |||||||||||| | |||||||||||| ||  | ||||| ||||| |||||||| ||||||    
T  33835 gttaagtatattaaaatggaaattatataatagttaatacattgaaattgtgtaattaatttataa-aagataaaaaatagttttcttttatgctaataa 33737  T
Q  142 ttcccttttatgatatgcttaaccagtgctctagggacaccggttagca 190  Q
    ||  || || ||||||||||||| |||| ||| || | |||||||||||    
T  33736 ttttctcttttgatatgcttaactagtg-tcttggaataccggttagca 33689  T

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Target: scaffold0533 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 5069 - 5136
Alignment:
Q  40 cggttaaggatataaaaaaggaaattatacagtagttaatgcattgaaattgtattattaatttataa 107  Q
    |||||||| |||| |||||  |||||||| ||||||||||  ||||||||||| | ||||||||||||    
T  5069 cggttaagaatattaaaaaaaaaattatatagtagttaatttattgaaattgtgtaattaatttataa 5136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 143
Target Start/End: Complemental strand, 74627 - 74526
Alignment:
Q  43 ttaaggatataaaaaaggaaattatacagtag-ttaatgcattgaaattgtattattaatttataataaagtcaaaaacagtttccttttatgataataa 141  Q
    |||| ||||| |||||  |||||||| ||||  |||||| | ||||||||||| ||||||| |||||||| | |||||||  || |||||||| ||||||    
T  74627 ttaaagatatgaaaaaaaaaattatatagtaaattaatgtagtgaaattgtataattaattgataataaattaaaaaacaaatttcttttatggtaataa 74528  T
Q  142 tt 143  Q
    ||    
T  74527 tt 74526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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