View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4047_low_9 (Length: 255)
Name: NF4047_low_9
Description: NF4047
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4047_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 44493700 - 44493928
Alignment:
| Q |
20 |
tgtgtctcaaccttatccactctcccagatcttacctcaaaaacagtccctcaaattatttgctctgtcctcaacaacaccataaaagaggttaagcaat |
119 |
Q |
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| T |
44493700 |
tgtgtctcaaccttatccactctcccagatcttacctcaaaaacagtcccgcaaattatttgctctgtcctcaacaacaccataaaagaggttaagcaat |
44493799 |
T |
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| Q |
120 |
catcttccaattgcaccggactccgaattcgcggtcgaagtgcacaaagcatacttgaccaaagagcacttgaggattgtgtcaatttatttgacactac |
219 |
Q |
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| T |
44493800 |
catcttccaattgcaccggactccgaattcgcggtcgaagtgcacaaagcatacttgaccaaagagcgcttgaggattgtgtcaatttatttgacactac |
44493899 |
T |
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| Q |
220 |
cattgacgaactcaaaacaaccatctctg |
248 |
Q |
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|||||||||||||||||||||||| |||| |
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| T |
44493900 |
cattgacgaactcaaaacaaccatttctg |
44493928 |
T |
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