View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4048_low_7 (Length: 433)

Name: NF4048_low_7
Description: NF4048
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4048_low_7
NF4048_low_7
[»] chr5 (20 HSPs)
chr5 (209-425)||(1849620-1849836)
chr5 (209-425)||(1163930-1164146)
chr5 (222-425)||(3299149-3299352)
chr5 (222-425)||(3392042-3392245)
chr5 (19-152)||(1163719-1163852)
chr5 (226-420)||(38987356-38987550)
chr5 (19-132)||(1849904-1850020)
chr5 (19-132)||(3299472-3299588)
chr5 (19-132)||(3392365-3392481)
chr5 (226-420)||(40417946-40418140)
chr5 (19-131)||(40418223-40418335)
chr5 (19-132)||(39879753-39879866)
chr5 (19-132)||(38987644-38987757)
chr5 (19-132)||(39726357-39726470)
chr5 (20-132)||(39168785-39168897)
chr5 (226-374)||(39726115-39726263)
chr5 (226-374)||(39879517-39879665)
chr5 (20-129)||(39399801-39399910)
chr5 (228-374)||(39168603-39168749)
chr5 (227-341)||(39399637-39399751)
[»] chr4 (3 HSPs)
chr4 (228-425)||(25912530-25912727)
chr4 (19-125)||(25912324-25912430)
chr4 (19-59)||(44444798-44444838)


Alignment Details
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 209 - 425
Target Start/End: Complemental strand, 1849836 - 1849620
Alignment:
Q  209 atctaatttctcgataccgagaacaacatattccactaactgatgcctagagaatgaaggcaggaagggtgcatcccagtaacgatcagcctttaagaaa 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  1849836 atctaatttctcgataccgagaacaacatattccactaactgatgcctagagaatgaaggcgtgaagggtgcatcccagtaacgatcagcctttaagaaa 1849737  T
Q  309 cagtgggtcaaggtaaatggatcaagcaaagtaaatgttctggcaaccctagtacaaataacaataggaccaatatttggacctaaagaagcagcaatat 408  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1849736 cagcgggtcaaggtaaatggatcaagcaaagtaaatgttctggcaaccctagtacaaataacaataggaccaatatttggacctaaagaagcagcaatat 1849637  T
Q  409 tactaggcagaataatc 425  Q
    |||||||||||||||||    
T  1849636 tactaggcagaataatc 1849620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 209 - 425
Target Start/End: Original strand, 1163930 - 1164146
Alignment:
Q  209 atctaatttctcgataccgagaacaacatattccactaactgatgcctagagaatgaaggcaggaagggtgcatcccagtaacgatcagcctttaagaaa 308  Q
    |||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||  ||||||||||||||||||  || ||||||||||||||    
T  1163930 atctaatttctcaataccgagaacagcatattccactaactgaggcctagagaatgaaggcgtgaagggtgcatcccagtattgaccagcctttaagaaa 1164029  T
Q  309 cagtgggtcaaggtaaatggatcaagcaaagtaaatgttctggcaaccctagtacaaataacaataggaccaatatttggacctaaagaagcagcaatat 408  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1164030 cagtgggtcaaggtaaatggatcaagcaaagtaaatgttttggcaaccctagtacaaataacaataggaccaatatttggacctaaagaagcagcaatat 1164129  T
Q  409 tactaggcagaataatc 425  Q
    |||||||||||||||||    
T  1164130 tactaggcagaataatc 1164146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 222 - 425
Target Start/End: Complemental strand, 3299352 - 3299149
Alignment:
Q  222 ataccgagaacaacatattccactaactgatgcctagagaatgaaggcaggaagggtgcatcccagtaacgatcagcctttaagaaacagtgggtcaagg 321  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||  || |||||||||||||||||||||||||||    
T  3299352 ataccgagaacaacatattccactaactgaggcctagagaatgaaggcgtgaagggtgcatcccagtattgaccagcctttaagaaacagtgggtcaagg 3299253  T
Q  322 taaatggatcaagcaaagtaaatgttctggcaaccctagtacaaataacaataggaccaatatttggacctaaagaagcagcaatattactaggcagaat 421  Q
    ||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  3299252 taaatggatcaagcaaagtaaatattttggcaaccctagtacaaatgacaataggaccaatatttggaccgaaagaagcagcaatatgactaggcagaat 3299153  T
Q  422 aatc 425  Q
    ||||    
T  3299152 aatc 3299149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 222 - 425
Target Start/End: Complemental strand, 3392245 - 3392042
Alignment:
Q  222 ataccgagaacaacatattccactaactgatgcctagagaatgaaggcaggaagggtgcatcccagtaacgatcagcctttaagaaacagtgggtcaagg 321  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||  || |||||||||||||||||||||||||||    
T  3392245 ataccgagaacaacatattccactaactgaggcctagagaatgaaggcgtgaagggtgcatcccagtattgaccagcctttaagaaacagtgggtcaagg 3392146  T
Q  322 taaatggatcaagcaaagtaaatgttctggcaaccctagtacaaataacaataggaccaatatttggacctaaagaagcagcaatattactaggcagaat 421  Q
    ||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  3392145 taaatggatcaagcaaagtaaatattttggcaaccctagtacaaatgacaataggaccaatatttggaccgaaagaagcagcaatatgactaggcagaat 3392046  T
Q  422 aatc 425  Q
    ||||    
T  3392045 aatc 3392042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 1163719 - 1163852
Alignment:
Q  19 gttttaaaatacgaccaagatgagtcttgatttgaaaagttgtgcg-attatttccaatatctttgacacgagcaactatggcattagctaaacgatatt 117  Q
    |||||||||||||||||||||||||| ||||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1163719 gttttaaaatacgaccaagatgagtcctgatttgaaaagt-gtgattattatttccaatatctttgacacgagcaactatggcattagctaaacgatatt 1163817  T
Q  118 ttttggcagcagcagtataagtagcataagcatca 152  Q
    |||||||||||||||||||||||||| ||||||||    
T  1163818 ttttggcagcagcagtataagtagcaaaagcatca 1163852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 226 - 420
Target Start/End: Complemental strand, 38987550 - 38987356
Alignment:
Q  226 cgagaacaacatattccactaactgatgcctagagaatgaaggcaggaagggtgcatcccagtaacgatcagcctttaagaaacagtgggtcaaggtaaa 325  Q
    |||||||||||||||| |||||||||  ||||  ||||||| |   ||| ||||| | ||||||  ||| ||| | ||||||||||||||||||||||||    
T  38987550 cgagaacaacatattcgactaactgagtcctattgaatgaatgtgtgaatggtgctttccagtactgatgagcatctaagaaacagtgggtcaaggtaaa 38987451  T
Q  326 tggatcaagcaaagtaaatgttctggcaaccctagtacaaataacaataggaccaatatttggacctaaagaagcagcaatattactaggcagaa 420  Q
    |||||||||||||||||||||| ||||||||||||| || || ||||||||||||||||||||||| ||||||||| ||| ||||  ||||||||    
T  38987450 tggatcaagcaaagtaaatgttttggcaaccctagtgcatatgacaataggaccaatatttggacccaaagaagcaacaacattaggaggcagaa 38987356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 1850020 - 1849904
Alignment:
Q  19 gttttaaaatacgaccaagatgagtcttgatttgaaaagttgtgcgattatt---tccaatatctttgacacgagcaactatggcattagctaaacgata 115  Q
    ||||||||||||||| |||||||||| ||||||||||||||||| |||||||   |||||||||||| ||||||||||||||||||||||||||||||||    
T  1850020 gttttaaaatacgactaagatgagtcctgatttgaaaagttgtgtgattattatttccaatatctttcacacgagcaactatggcattagctaaacgata 1849921  T
Q  116 ttttttggcagcagcag 132  Q
    |||||||||||||||||    
T  1849920 ttttttggcagcagcag 1849904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 3299588 - 3299472
Alignment:
Q  19 gttttaaaatacgaccaagatgagtcttgatttgaaaagttgtgcgattatt---tccaatatctttgacacgagcaactatggcattagctaaacgata 115  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||| ||||||||||| ||||||| ||||||||||||    
T  3299588 gttttaaaatacgaccaagatgagtcttgatttgaaaagttgtgtgattattatttccaatatctttcacacgagcaaccatggcatcagctaaacgata 3299489  T
Q  116 ttttttggcagcagcag 132  Q
    |||||||||||||||||    
T  3299488 ttttttggcagcagcag 3299472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 3392481 - 3392365
Alignment:
Q  19 gttttaaaatacgaccaagatgagtcttgatttgaaaagttgtgcgattatt---tccaatatctttgacacgagcaactatggcattagctaaacgata 115  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||| ||||||||||| ||||||| ||||||||||||    
T  3392481 gttttaaaatacgaccaagatgagtcttgatttgaaaagttgtgtgattattatttccaatatctttcacacgagcaaccatggcatcagctaaacgata 3392382  T
Q  116 ttttttggcagcagcag 132  Q
    |||||||||||||||||    
T  3392381 ttttttggcagcagcag 3392365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 226 - 420
Target Start/End: Complemental strand, 40418140 - 40417946
Alignment:
Q  226 cgagaacaacatattccactaactgatgcctagagaatgaaggcaggaagggtgcatcccagtaacgatcagcctttaagaaacagtgggtcaaggtaaa 325  Q
    |||||||||||||||| |||||||||  ||||  ||||||| |   ||| ||||| | ||||||  ||| ||| | ||||||||||||||||||||||||    
T  40418140 cgagaacaacatattcgactaactgagtcctattgaatgaatgtgtgaatggtgctttccagtactgatgagcatctaagaaacagtgggtcaaggtaaa 40418041  T
Q  326 tggatcaagcaaagtaaatgttctggcaaccctagtacaaataacaataggaccaatatttggacctaaagaagcagcaatattactaggcagaa 420  Q
    |||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||  ||| ||||||||| ||| ||||  ||||||||    
T  40418040 tggatcaagcaaagtaaatgttttggcaaccctagtgcaaatgacaataggaccaatattttcaccgaaagaagcaacaacattaggaggcagaa 40417946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 40418335 - 40418223
Alignment:
Q  19 gttttaaaatacgaccaagatgagtcttgatttgaaaagttgtgcgattatttccaatatctttgacacgagcaactatggcattagctaaacgatattt 118  Q
    |||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||| ||||||||||| |  |||| |||||||| ||||||    
T  40418335 gttttaaaatacgaccaagatgagtcctgatttgaaaagttgtgtcattatttccaatatctttcacacgagcaaccacagcatcagctaaacaatattt 40418236  T
Q  119 tttggcagcagca 131  Q
    |||||||||||||    
T  40418235 tttggcagcagca 40418223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 39879866 - 39879753
Alignment:
Q  19 gttttaaaatacgaccaagatgagtcttgatttgaaaagttgtgcgattatttccaatatctttgacacgagcaactatggcattagctaaacgatattt 118  Q
    |||||||||||||||||||||||||| |||||||||||||||||  |||||||||| ||||||| ||||||||||| |  |||| |||||||||||||||    
T  39879866 gttttaaaatacgaccaagatgagtcctgatttgaaaagttgtgtcattatttccagtatctttcacacgagcaaccacagcatcagctaaacgatattt 39879767  T
Q  119 tttggcagcagcag 132  Q
    |||||| |||||||    
T  39879766 tttggcggcagcag 39879753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 38987757 - 38987644
Alignment:
Q  19 gttttaaaatacgaccaagatgagtcttgatttgaaaagttgtgcgattatttccaatatctttgacacgagcaactatggcattagctaaacgatattt 118  Q
    ||||||| |||||||| ||||||||| |||||||||||||||||  |||||||||| ||||||| ||||||||||| |  |||| |||||||||||||||    
T  38987757 gttttaagatacgaccgagatgagtcctgatttgaaaagttgtgtcattatttccagtatctttcacacgagcaaccacagcatcagctaaacgatattt 38987658  T
Q  119 tttggcagcagcag 132  Q
    |||||| |||||||    
T  38987657 tttggcggcagcag 38987644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 39726470 - 39726357
Alignment:
Q  19 gttttaaaatacgaccaagatgagtcttgatttgaaaagttgtgcgattatttccaatatctttgacacgagcaactatggcattagctaaacgatattt 118  Q
    ||||||| |||||||| ||||||||| |||||||||||||||||  |||||||||| ||||||| ||||||||||| |  |||| |||||||||||||||    
T  39726470 gttttaagatacgaccgagatgagtcctgatttgaaaagttgtgtcattatttccagtatctttcacacgagcaaccacagcatcagctaaacgatattt 39726371  T
Q  119 tttggcagcagcag 132  Q
    |||||| |||||||    
T  39726370 tttggcggcagcag 39726357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 39168897 - 39168785
Alignment:
Q  20 ttttaaaatacgaccaagatgagtcttgatttgaaaagttgtgcgattatttccaatatctttgacacgagcaactatggcattagctaaacgatatttt 119  Q
    |||||||||| |||| |||||||| ||||||||||||||||||  ||||||||||| |||||  ||||||||||| | ||||| |||||| |||||||||    
T  39168897 ttttaaaatatgacctagatgagttttgatttgaaaagttgtgtcattatttccaaaatcttccacacgagcaaccacggcatcagctaaccgatatttt 39168798  T
Q  120 ttggcagcagcag 132  Q
    |||||||||||||    
T  39168797 ttggcagcagcag 39168785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 226 - 374
Target Start/End: Complemental strand, 39726263 - 39726115
Alignment:
Q  226 cgagaacaacatattccactaactgatgcctagagaatgaaggcaggaagggtgcatcccagtaacgatcagcctttaagaaacagtgggtcaaggtaaa 325  Q
    |||||||||||||||| |||||||||  ||||  ||||||| |   ||| ||||| | ||||||  ||| ||| | ||||||||||||||||||||||||    
T  39726263 cgagaacaacatattcgactaactgagtcctattgaatgaatgtgtgaatggtgctttccagtactgatgagcatctaagaaacagtgggtcaaggtaaa 39726164  T
Q  326 tggatcaagcaaagtaaatgttctggcaaccctagtacaaataacaata 374  Q
    |||||||||||||||||||||| ||||||||||||| || || ||||||    
T  39726163 tggatcaagcaaagtaaatgttttggcaaccctagtgcatatgacaata 39726115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 226 - 374
Target Start/End: Complemental strand, 39879665 - 39879517
Alignment:
Q  226 cgagaacaacatattccactaactgatgcctagagaatgaaggcaggaagggtgcatcccagtaacgatcagcctttaagaaacagtgggtcaaggtaaa 325  Q
    |||||||||||||||| |||||||||  ||||  ||||||| |   ||| ||||| | ||||||  ||| ||| | ||||||||||||||||||||||||    
T  39879665 cgagaacaacatattcgactaactgagtcctattgaatgaatgtgtgaatggtgctttccagtactgatgagcatctaagaaacagtgggtcaaggtaaa 39879566  T
Q  326 tggatcaagcaaagtaaatgttctggcaaccctagtacaaataacaata 374  Q
    |||||||||||||||||||||| ||||||||||||| || || ||||||    
T  39879565 tggatcaagcaaagtaaatgttttggcaaccctagtgcatatgacaata 39879517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 39399910 - 39399801
Alignment:
Q  20 ttttaaaatacgaccaagatgagtcttgatttgaaaagttgtgcgattatttccaatatctttgacacgagcaactatggcattagctaaacgatatttt 119  Q
    |||||||||| |||||||||||||| |||||||||||||||||  ||||||||||| || ||  ||||||||||| | ||||| ||||||||| ||||||    
T  39399910 ttttaaaatatgaccaagatgagtcctgatttgaaaagttgtgtcattatttccaaaattttccacacgagcaaccacggcatcagctaaacggtatttt 39399811  T
Q  120 ttggcagcag 129  Q
    || |||||||    
T  39399810 ttagcagcag 39399801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 374
Target Start/End: Complemental strand, 39168749 - 39168603
Alignment:
Q  228 agaacaacatattccactaactgatgcctagagaatgaaggcaggaagggtgcatcccagtaacgatcagcctttaagaaacagtgggtcaaggtaaatg 327  Q
    ||||||||||||| ||||||||||  ||||| ||||||| ||  ||||||||||| ||||||   ||||||||||||| || |    |||||||||||||    
T  39168749 agaacaacatatttcactaactgagtcctagtgaatgaatgcgtgaagggtgcattccagtactcatcagcctttaaggaaaaagcagtcaaggtaaatg 39168650  T
Q  328 gatcaagcaaagtaaatgttctggcaaccctagtacaaataacaata 374  Q
    ||||||| ||||||| | || ||||||||||||| || |||||||||    
T  39168649 gatcaagtaaagtaatttttttggcaaccctagtgcatataacaata 39168603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 227 - 341
Target Start/End: Complemental strand, 39399751 - 39399637
Alignment:
Q  227 gagaacaacatattccactaactgatgcctagagaatgaaggcaggaagggtgcatcccagtaacgatcagcctttaagaaacagtgggtcaaggtaaat 326  Q
    |||||||| |||||  |||||||||  ||||  ||||||| ||  ||| ||||||| ||||||  |||||||||||||| || |   |||||||||||||    
T  39399751 gagaacaaaatatttgactaactgagtcctattgaatgaatgcgtgaaaggtgcattccagtagtgatcagcctttaaggaaaaagcggtcaaggtaaat 39399652  T
Q  327 ggatcaagcaaagta 341  Q
    |||||||||||||||    
T  39399651 ggatcaagcaaagta 39399637  T

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Target: chr4 (Bit Score: 98; Significance: 4e-48; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 228 - 425
Target Start/End: Original strand, 25912530 - 25912727
Alignment:
Q  228 agaacaacatattccactaactgatgcctagagaatgaaggcaggaagggtgcatcccagtaacgatcagcctttaagaaacagtgggtcaaggtaaatg 327  Q
    ||||||| |||||| ||||||||| |||||| |||| |||||  ||||||||||| ||||||  |||||||||| |||||||| || |||||||||||||    
T  25912530 agaacaatatattcaactaactgaggcctagtgaattaaggcgtgaagggtgcattccagtactgatcagccttcaagaaacaatgagtcaaggtaaatg 25912629  T
Q  328 gatcaagcaaagtaaatgttctggcaaccctagtacaaataacaataggaccaatatttggacctaaagaagcagcaatattactaggcagaataatc 425  Q
    ||||||| |||||||||||| ||||||||||||| ||||| ||||||||||||||||||  ||  ||||||||||||| ||||  |||||||| ||||    
T  25912630 gatcaagtaaagtaaatgttttggcaaccctagtgcaaatgacaataggaccaatatttacactgaaagaagcagcaacattaggaggcagaaaaatc 25912727  T

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Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 25912324 - 25912430
Alignment:
Q  19 gttttaaaatacgaccaagatgagtcttgatttgaaaagttgtgcgattatttccaatatctttgacacgagcaactatggcattagctaaacgatattt 118  Q
    |||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||||||| ||||||||||| |   ||| |||||||||||||||    
T  25912324 gttttagaatacgaccaagatgagtcctgatttgaaaagttgtgtcattatttccaatatctttcacacgagcaaccacatcatcagctaaacgatattt 25912423  T
Q  119 tttggca 125  Q
    |||||||    
T  25912424 tttggca 25912430  T

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Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 44444798 - 44444838
Alignment:
Q  19 gttttaaaatacgaccaagatgagtcttgatttgaaaagtt 59  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44444798 gttttaaaatacgaccaagatgagtcttgatttgaaaagtt 44444838  T

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