View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4048_low_9 (Length: 398)
Name: NF4048_low_9
Description: NF4048
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4048_low_9 |
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Alignment Details
Target: chr6 (Bit Score: 335; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 19 - 385
Target Start/End: Original strand, 14736206 - 14736572
Alignment:
| Q |
19 |
atattaagagacttaatgaaggtattcaagtgttagtgacctaagacagagttgtacaaataagtggattaaggaacttactaacaaatgccaaatgtat |
118 |
Q |
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| T |
14736206 |
atattcagagacttaatgaaggtattcaagtgttagtgacctaagacagagttgtacaaataagtggattaaggaacttactaacaaatgtcagatgtat |
14736305 |
T |
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| Q |
119 |
tggcgtgtttggttttgtttttctccatctccgaggtgtatgagccaccacataaatcataaccaaggaaatgtgttatggaaattattcagcttgagga |
218 |
Q |
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| T |
14736306 |
tggcgtgtttggttttgtttttctctatctccgaggtgtatgagccaccacacaaatcataaccaagaaaatgtgttatggaaattattcagcttgagga |
14736405 |
T |
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| Q |
219 |
attgaagattttctgattttggaaaagcacccatttatctatcaacccaagttagatatttttgaatgctatgtcgtcaagaccaagattaggaacgtca |
318 |
Q |
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| T |
14736406 |
attgaagattttctgattttggaaaagcactcatttatctatcaacccaagttagatatttttgaatgatatgtcgtcaagaccaagattaggaacgtca |
14736505 |
T |
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| Q |
319 |
tttaagaatattcaccgaaatttgaatatctctctaaagacttgaggaaagatatgaatgacacagg |
385 |
Q |
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| T |
14736506 |
tttaagaatattcaccgaaatttgaatatctctctaaagacttgaggaaagatatgaatgacacagg |
14736572 |
T |
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