View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4049_high_20 (Length: 286)
Name: NF4049_high_20
Description: NF4049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4049_high_20 |
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Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 10 - 269
Target Start/End: Complemental strand, 26922625 - 26922365
Alignment:
| Q |
10 |
agtagcatagggattaagttaatgtttttgccagcttctaatgcaannnnnnnnnccaatgcttgatttaaaaaactccaataaatttcaaaataatgta |
109 |
Q |
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| T |
26922625 |
agtatcatagggattaagttaatgtttttgccagctactaatgcaatttttttt-ccaatgcttgatttaaaaaactccattaaatttcaaaataatgta |
26922527 |
T |
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| Q |
110 |
cgataaagttatatata--cacgtttattcaaagaagaccaattggtagcaaactatttctatttttagatcacataccaggcattgtttttacaatttc |
207 |
Q |
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| T |
26922526 |
cgttaaagttatatatatacacgtttattcaaagaagaccaattggtagcaaactatttctattttaagatcacatactaggcattgtttttacaatttc |
26922427 |
T |
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| Q |
208 |
ttgtctattgattaagttaatatggattaagatagtcgatacatgtttaaatgttcactgag |
269 |
Q |
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| T |
26922426 |
ttgtctattgattaagttaatatggattaagatagtcgatacatgtttaaatgttcactgag |
26922365 |
T |
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